HG10020203 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10020203
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	ras-related protein RABC2a
Location	Chr04: 29791448 .. 29793259 (+)
RNA-Seq Expression	HG10020203
Synteny	HG10020203

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGATCTTCTTCTGGACAGAGTAGCAATTACGATCTGTCCTTTAAGGTTTTGTTGATCGGCGATTCAGGTGTCGGCAAAAGTAGTCTTCTTCTCAGCTTCATCTCTACTAATGCTGATAATCTTGCCCCTACGATTGGTAAGTTTTTGCTTTCCCCACACCAACCAAACCCCACCTTTTCTTTTGCATAAAGGAACTGCTTTTCTGCTCATAATCTGTTTAGGGGAAGTGCTTTTCTGCTCATAATCTGTTTGATTGTGGAGAAAATGATGAACAGGAGCTGCCCTTCTCATCTCCTTCTTTCTGGTGTTTTGGTTTCTGTGTTTGGATCTGTTTTGTTTTTGTTTTTTTAAAATAGTTTGTTTCTTTTTAGGTGTGGATTTTAAGATCAAGCTGCTTAAGGTGGGTGGGAAGAGATTGAAGCTCACAATCTGGGACACTGGTAATGAATAAGCTTTAAAGGGTTCTTTTATCTGCCTTTTTTTTTTTTTTTTTTGTTCAAATTATGGAGATTTCCACTTCATTTTGTATCTGAACTCTTAAGAACTAGTTTTTTTTGGACCTATACTCCAATTTTTTAGTTCTGTTCAAAGTGTTTCTGTTTTGTTCCCTTTCTAAAAGATGTGGGAAGAAGAAAGTTTGCACAAAGTCGTTGGAATCTCAATTTGTTTCATTGCTTCCAATATCAATTCCTTTGCAAACACTTCATATGTATTGCTTTTGAACTTGTTTAAGCCTTGGTTTCTTGCAGCTGGACAAGAGAGATTCAGAACACTAACAAGCTCCTATTATAGAGGTGCCCAAGGCATCATTCTTGGTATGCTTCAAACTTTGATCTCATCTTTCAAAACCTGATGCTGAAGGATGTTTCACTAGTATTTTGTTGTCTTCTGAGCTAATATTTCTCTGGATTTTGTGGTGTACATTTATCCTGAAATTCTCTACTTTTAACTCGAGCCGAAACGGGGGGACATTTGGTGGAGGGAAATATAAGTTTCATTCAAAATAGAATTGTGATACAACCTAAAACAGCAGTTACAATTGGTTCTGTTCATCTACATTTTGTTTGTTTCATTTGTCAATCAGTACATTCAACAGGGTTATGTTCATAATCTTGTTGTAGTCTATGATGTCACACGGAGAGAAACATTCACAAACTTATCCGACGTATGGGCTAAAGAAGTGGAACTCTACTCGACAAATAAGGACTGTGTCAAGATGCTTATTGGAAACAAGGTTGACAGAGTAAGTTTCCTTCTTTCTCTGGTGTTTTCAAGAACAGTCCTCAATATGTCTAAATTGAATTTTCACACCTTCATTTCCAAATGATTTGTTGACAAACGCTCCTTCATCTTAGTGAATGGCGATGATAATATCTATGTTATACAGCTTGAAGTTTTGTTCTACCATTCATAGCTCAGGATTTTTCACATACATCTGAGTAGTCTTGAAAAATGATAGAACTTAATGTGTGTTAAACAATAGGAATCTGAAAGGGCTGTGAGCAGAGAGGAGGGGATTGCTCTAGCAAAGGAGCTTGGATCCTATTTTCTTGAATGCAGTGCTAAAACCAGAGAGAATGTGGAGAAATGCTTTGAAGAGTTGGCATTGAAGGTAGATTTCAATCAAATCAATTTCAAGTACTATGCTCGAGAAACCAATCCATTCGTTCGTTGTATGAATCTTTTCTTTTGTGTCCACAGATAATGGAGGCTCCTAGTCTGATTGAAGAGGGTTCCACTGTTGTAAAAAGAAACATTCTGAAGCAGCAGGAATTCCAGCCTGCATCATCTCCAAGTTGCTGCCTCTGA

mRNA sequence

ATGGGATCTTCTTCTGGACAGAGTAGCAATTACGATCTGTCCTTTAAGGTTTTGTTGATCGGCGATTCAGGTGTCGGCAAAAGTAGTCTTCTTCTCAGCTTCATCTCTACTAATGCTGATAATCTTGCCCCTACGATTGGTGTGGATTTTAAGATCAAGCTGCTTAAGGTGGGTGGGAAGAGATTGAAGCTCACAATCTGGGACACTGCTGGACAAGAGAGATTCAGAACACTAACAAGCTCCTATTATAGAGGTGCCCAAGGCATCATTCTTGTCTATGATGTCACACGGAGAGAAACATTCACAAACTTATCCGACGTATGGGCTAAAGAAGTGGAACTCTACTCGACAAATAAGGACTGTGTCAAGATGCTTATTGGAAACAAGGTTGACAGAGAATCTGAAAGGGCTGTGAGCAGAGAGGAGGGGATTGCTCTAGCAAAGGAGCTTGGATCCTATTTTCTTGAATGCAGTGCTAAAACCAGAGAGAATGTGGAGAAATGCTTTGAAGAGTTGGCATTGAAGATAATGGAGGCTCCTAGTCTGATTGAAGAGGGTTCCACTGTTGTAAAAAGAAACATTCTGAAGCAGCAGGAATTCCAGCCTGCATCATCTCCAAGTTGCTGCCTCTGA

Coding sequence (CDS)

ATGGGATCTTCTTCTGGACAGAGTAGCAATTACGATCTGTCCTTTAAGGTTTTGTTGATCGGCGATTCAGGTGTCGGCAAAAGTAGTCTTCTTCTCAGCTTCATCTCTACTAATGCTGATAATCTTGCCCCTACGATTGGTGTGGATTTTAAGATCAAGCTGCTTAAGGTGGGTGGGAAGAGATTGAAGCTCACAATCTGGGACACTGCTGGACAAGAGAGATTCAGAACACTAACAAGCTCCTATTATAGAGGTGCCCAAGGCATCATTCTTGTCTATGATGTCACACGGAGAGAAACATTCACAAACTTATCCGACGTATGGGCTAAAGAAGTGGAACTCTACTCGACAAATAAGGACTGTGTCAAGATGCTTATTGGAAACAAGGTTGACAGAGAATCTGAAAGGGCTGTGAGCAGAGAGGAGGGGATTGCTCTAGCAAAGGAGCTTGGATCCTATTTTCTTGAATGCAGTGCTAAAACCAGAGAGAATGTGGAGAAATGCTTTGAAGAGTTGGCATTGAAGATAATGGAGGCTCCTAGTCTGATTGAAGAGGGTTCCACTGTTGTAAAAAGAAACATTCTGAAGCAGCAGGAATTCCAGCCTGCATCATCTCCAAGTTGCTGCCTCTGA

Protein sequence

MGSSSGQSSNYDLSFKVLLIGDSGVGKSSLLLSFISTNADNLAPTIGVDFKIKLLKVGGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVELYSTNKDCVKMLIGNKVDRESERAVSREEGIALAKELGSYFLECSAKTRENVEKCFEELALKIMEAPSLIEEGSTVVKRNILKQQEFQPASSPSCCL

Homology

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BLAST of HG10020203 vs. NCBI nr
Match: XP_038905103.1 (ras-related protein RABC2a-like [Benincasa hispida])

HSP 1 Score: 404.8 bits (1039), Expect = 4.4e-109
Identity = 207/210 (98.57%), Postives = 208/210 (99.05%), Query Frame = 0


Query: 1   MGSSSGQSSNYDLSFKVLLIGDSGVGKSSLLLSFISTNADNLAPTIGVDFKIKLLKVGGK 60
           MGSSSGQSSNYDLSFKVLLIGDSGVGKSSLLLSFISTNADNLAPTIGVDFKIKLLKVGGK
Sbjct: 1   MGSSSGQSSNYDLSFKVLLIGDSGVGKSSLLLSFISTNADNLAPTIGVDFKIKLLKVGGK 60

Query: 61  RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVELYSTNKD 120
           RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETF NLSDVWAKEVELYSTNKD
Sbjct: 61  RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFANLSDVWAKEVELYSTNKD 120

Query: 121 CVKMLIGNKVDRESERAVSREEGIALAKELGSYFLECSAKTRENVEKCFEELALKIMEAP 180
           CVKMLIGNKVDRESER VSREEGIALAKELGSYFLECSAKTRENVEKCFEELALKIMEAP
Sbjct: 121 CVKMLIGNKVDRESERVVSREEGIALAKELGSYFLECSAKTRENVEKCFEELALKIMEAP 180

Query: 181 SLIEEGSTVVKRNILKQQEFQPASSPSCCL 211
           SLIEEGSTVVKRNILKQQEFQPA+SPSCCL
Sbjct: 181 SLIEEGSTVVKRNILKQQEFQPAASPSCCL 210

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BLAST of HG10020203 vs. NCBI nr
Match: XP_004137847.1 (ras-related protein RABC2a [Cucumis sativus] >KGN59006.1 hypothetical protein Csa_001955 [Cucumis sativus])

HSP 1 Score: 401.4 bits (1030), Expect = 4.9e-108
Identity = 206/210 (98.10%), Postives = 208/210 (99.05%), Query Frame = 0


Query: 1   MGSSSGQSSNYDLSFKVLLIGDSGVGKSSLLLSFISTNADNLAPTIGVDFKIKLLKVGGK 60
           MGSSSGQSSNYDLSFKVLLIGDSGVGKSSLLLSFISTNADNLAPTIGVDFKIKLLKVGGK
Sbjct: 1   MGSSSGQSSNYDLSFKVLLIGDSGVGKSSLLLSFISTNADNLAPTIGVDFKIKLLKVGGK 60

Query: 61  RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVELYSTNKD 120
           RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVELYSTNKD
Sbjct: 61  RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVELYSTNKD 120

Query: 121 CVKMLIGNKVDRESERAVSREEGIALAKELGSYFLECSAKTRENVEKCFEELALKIMEAP 180
           CVKMLIGNKVDRESERAVSREEGIALAK LGSYFLECSAKTRENVEKCFE+LALKIMEAP
Sbjct: 121 CVKMLIGNKVDRESERAVSREEGIALAKVLGSYFLECSAKTRENVEKCFEDLALKIMEAP 180

Query: 181 SLIEEGSTVVKRNILKQQEFQPASSPSCCL 211
           SLIEEGSTVVKRNILKQQEFQPAS+ SCCL
Sbjct: 181 SLIEEGSTVVKRNILKQQEFQPASTTSCCL 210

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BLAST of HG10020203 vs. NCBI nr
Match: XP_008442732.1 (PREDICTED: ras-related protein RABC2a [Cucumis melo] >KAA0043972.1 ras-related protein RABC2a [Cucumis melo var. makuwa] >TYK25168.1 ras-related protein RABC2a [Cucumis melo var. makuwa])

HSP 1 Score: 399.1 bits (1024), Expect = 2.4e-107
Identity = 206/210 (98.10%), Postives = 207/210 (98.57%), Query Frame = 0


Query: 1   MGSSSGQSSNYDLSFKVLLIGDSGVGKSSLLLSFISTNADNLAPTIGVDFKIKLLKVGGK 60
           MGSSSGQSSNYDLSFKVLLIGDSGVGKSSLLLSFISTNADNLAPTIGVDFKIKLLKVGGK
Sbjct: 1   MGSSSGQSSNYDLSFKVLLIGDSGVGKSSLLLSFISTNADNLAPTIGVDFKIKLLKVGGK 60

Query: 61  RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVELYSTNKD 120
           RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVELYSTNKD
Sbjct: 61  RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVELYSTNKD 120

Query: 121 CVKMLIGNKVDRESERAVSREEGIALAKELGSYFLECSAKTRENVEKCFEELALKIMEAP 180
           CVKMLIGNKVDRESERAVSREEGIALAK LGS FLECSAKTRENVEKCFEELALKIMEAP
Sbjct: 121 CVKMLIGNKVDRESERAVSREEGIALAKVLGSCFLECSAKTRENVEKCFEELALKIMEAP 180

Query: 181 SLIEEGSTVVKRNILKQQEFQPASSPSCCL 211
           SLIEEGSTVVKRNILKQQEFQPAS+ SCCL
Sbjct: 181 SLIEEGSTVVKRNILKQQEFQPASTTSCCL 210

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BLAST of HG10020203 vs. NCBI nr
Match: XP_023005146.1 (ras-related protein RABC2a-like [Cucurbita maxima] >XP_023541000.1 ras-related protein RABC2a-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 392.5 bits (1007), Expect = 2.3e-105
Identity = 201/210 (95.71%), Postives = 206/210 (98.10%), Query Frame = 0


Query: 1   MGSSSGQSSNYDLSFKVLLIGDSGVGKSSLLLSFISTNADNLAPTIGVDFKIKLLKVGGK 60
           MGSSSGQSSNYDLSFKVLLIGDSGVGKSSLLLSFISTNA+NLAPTIGVDFKIKLL+VGGK
Sbjct: 1   MGSSSGQSSNYDLSFKVLLIGDSGVGKSSLLLSFISTNAENLAPTIGVDFKIKLLQVGGK 60

Query: 61  RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVELYSTNKD 120
           RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETF NLSDVWAKEVELYSTNK+
Sbjct: 61  RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFDNLSDVWAKEVELYSTNKE 120

Query: 121 CVKMLIGNKVDRESERAVSREEGIALAKELGSYFLECSAKTRENVEKCFEELALKIMEAP 180
           CVKMLIGNKVDRESERAVSREEGIALAKELGS+FLECSAKTRENVEKCFEELALKIMEAP
Sbjct: 121 CVKMLIGNKVDRESERAVSREEGIALAKELGSFFLECSAKTRENVEKCFEELALKIMEAP 180

Query: 181 SLIEEGSTVVKRNILKQQEFQPASSPSCCL 211
           SLIEEGSTVVKRNILKQQE QPA + SCCL
Sbjct: 181 SLIEEGSTVVKRNILKQQELQPAPTASCCL 210

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BLAST of HG10020203 vs. NCBI nr
Match: XP_022936998.1 (ras-related protein RABC2a-like [Cucurbita moschata])

HSP 1 Score: 390.6 bits (1002), Expect = 8.7e-105
Identity = 200/210 (95.24%), Postives = 206/210 (98.10%), Query Frame = 0


Query: 1   MGSSSGQSSNYDLSFKVLLIGDSGVGKSSLLLSFISTNADNLAPTIGVDFKIKLLKVGGK 60
           MGSSSGQSSNYDLSFKVLLIGDSGVGKSSLLLSFIST+A+NLAPTIGVDFKIKLL+VGGK
Sbjct: 1   MGSSSGQSSNYDLSFKVLLIGDSGVGKSSLLLSFISTSAENLAPTIGVDFKIKLLQVGGK 60

Query: 61  RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVELYSTNKD 120
           RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETF NLSDVWAKEVELYSTNK+
Sbjct: 61  RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFDNLSDVWAKEVELYSTNKE 120

Query: 121 CVKMLIGNKVDRESERAVSREEGIALAKELGSYFLECSAKTRENVEKCFEELALKIMEAP 180
           CVKMLIGNKVDRESERAVSREEGIALAKELGS+FLECSAKTRENVEKCFEELALKIMEAP
Sbjct: 121 CVKMLIGNKVDRESERAVSREEGIALAKELGSFFLECSAKTRENVEKCFEELALKIMEAP 180

Query: 181 SLIEEGSTVVKRNILKQQEFQPASSPSCCL 211
           SLIEEGSTVVKRNILKQQE QPA + SCCL
Sbjct: 181 SLIEEGSTVVKRNILKQQELQPAPTASCCL 210

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BLAST of HG10020203 vs. ExPASy Swiss-Prot
Match: O49841 (Ras-related protein RABC2a OS=Arabidopsis thaliana OX=3702 GN=RABC2A PE=1 SV=1)

HSP 1 Score: 336.7 bits (862), Expect = 1.9e-91
Identity = 172/210 (81.90%), Postives = 190/210 (90.48%), Query Frame = 0


Query: 1   MGSSSGQSSNYDLSFKVLLIGDSGVGKSSLLLSFISTNADNLAPTIGVDFKIKLLKVGGK 60
           MGSSSGQ S YDLSFK+LLIGDSGVGKSSLL+SFIS++ ++LAPTIGVDFKIK L VGGK
Sbjct: 1   MGSSSGQ-SGYDLSFKILLIGDSGVGKSSLLVSFISSSVEDLAPTIGVDFKIKQLTVGGK 60

Query: 61  RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVELYSTNKD 120
           RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNL DVW KE+ELYSTN++
Sbjct: 61  RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLVDVWGKEIELYSTNQE 120

Query: 121 CVKMLIGNKVDRESERAVSREEGIALAKELGSYFLECSAKTRENVEKCFEELALKIMEAP 180
           CV+ML+GNKVDRESER VSREEGIALAKEL   FLECSA+TR+NVE+CFEELALKIME P
Sbjct: 121 CVRMLVGNKVDRESERGVSREEGIALAKELNCMFLECSARTRQNVEQCFEELALKIMEVP 180

Query: 181 SLIEEGSTVVKRNILKQQ-EFQPASSPSCC 210
           SL+EEGS+ VKRNILKQ+ E Q  +   CC
Sbjct: 181 SLLEEGSSAVKRNILKQKPEHQTNTQSGCC 209

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BLAST of HG10020203 vs. ExPASy Swiss-Prot
Match: Q9SF92 (Ras-related protein RABC2b OS=Arabidopsis thaliana OX=3702 GN=RABC2B PE=2 SV=1)

HSP 1 Score: 310.5 bits (794), Expect = 1.5e-83
Identity = 156/192 (81.25%), Postives = 176/192 (91.67%), Query Frame = 0


Query: 1   MGSSSGQSSNYDLSFKVLLIGDSGVGKSSLLLSFISTNADNLAPTIGVDFKIKLLKVGGK 60
           MGSSSGQ S YDLSFK+LLIGDSGVGKSSLLLSFIS++ ++LAPTIGVDFKIK +KV GK
Sbjct: 1   MGSSSGQ-SGYDLSFKILLIGDSGVGKSSLLLSFISSSVEDLAPTIGVDFKIKQMKVRGK 60

Query: 61  RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVELYSTNKD 120
           RLKLTIWDTAGQE+FRTLTSSY+RG+QGIILVYDVT+RETF NL+D+WAKE+ELYSTN D
Sbjct: 61  RLKLTIWDTAGQEKFRTLTSSYFRGSQGIILVYDVTKRETFLNLADIWAKEIELYSTNHD 120

Query: 121 CVKMLIGNKVDRESERAVSREEGIALAKELGSYFLECSAKTRENVEKCFEELALKIMEAP 180
           C+KML+GNKVDRESER VSREEG+ALAK+L   F ECSA+TRENV  CFEELALKIME P
Sbjct: 121 CIKMLVGNKVDRESERKVSREEGMALAKDLNCLFHECSARTRENVNGCFEELALKIMEVP 180

Query: 181 SLIEEGSTVVKR 193
           SL+EEGS+ VKR
Sbjct: 181 SLLEEGSSSVKR 191

[Close]

BLAST of HG10020203 vs. ExPASy Swiss-Prot
Match: O23657 (Ras-related protein RABC1 OS=Arabidopsis thaliana OX=3702 GN=RABC1 PE=1 SV=1)

HSP 1 Score: 303.9 bits (777), Expect = 1.4e-81
Identity = 154/211 (72.99%), Postives = 177/211 (83.89%), Query Frame = 0


Query: 1   MGSSSGQSSNYDLSFKVLLIGDSGVGKSSLLLSFISTNADNLAPTIGVDFKIKLLKVGGK 60
           MGSSSGQ   +D  FKVLLIGDSGVGKSSLLLSF S   D+L+PTIGVDFK+K L +G K
Sbjct: 1   MGSSSGQ-PEFDYLFKVLLIGDSGVGKSSLLLSFTSNTFDDLSPTIGVDFKVKYLTIGEK 60

Query: 61  RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVELYSTNKD 120
           +LKL IWDTAGQERFRTLTSSYYRGAQGII+VYDVTRR+TFTNLSD+WAKE++LYSTN+D
Sbjct: 61  KLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDIWAKEIDLYSTNQD 120

Query: 121 CVKMLIGNKVDRESERAVSREEGIALAKELGSYFLECSAKTRENVEKCFEELALKIMEAP 180
           C+KML+GNKVD+ESERAVS++EGI  A+E G  FLECSAKTR NVE+CFEEL LKI+E P
Sbjct: 121 CIKMLVGNKVDKESERAVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILETP 180

Query: 181 SLIEEGSTVVKRNILKQQEFQPASSPS--CC 210
           SL  EGS+  K+NI KQ   Q  S+ S  CC
Sbjct: 181 SLTAEGSSGGKKNIFKQNPAQTTSTSSSYCC 210

[Close]

BLAST of HG10020203 vs. ExPASy Swiss-Prot
Match: Q6DHC1 (Ras-related protein Rab-18-B OS=Danio rerio OX=7955 GN=rab18b PE=2 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 1.4e-49
Identity = 103/196 (52.55%), Postives = 136/196 (69.39%), Query Frame = 0


Query: 14  SFKVLLIGDSGVGKSSLLLSFISTNAD-NLAPTIGVDFKIKLLKVGGKRLKLTIWDTAGQ 73
           + K+L+IG+SGVGKSSLLL F     D  LA TIGVDFK+K + + G R KL IWDTAGQ
Sbjct: 8   TLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTIAIDGNRAKLAIWDTAGQ 67

Query: 74  ERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVELYSTNKDCVKMLIGNKVDR 133
           ERFRTLT SYYRGAQG+ILVYDVT+R+TFT L + W  E+E Y T  D VKML+GNK+D+
Sbjct: 68  ERFRTLTPSYYRGAQGVILVYDVTKRDTFTKLEN-WLNELETYCTRNDLVKMLVGNKIDK 127

Query: 134 ESERAVSREEGIALAKELGSYFLECSAKTRENVEKCFEELALKIMEAPSLIEEGSTVVKR 193
           ++ R V R EG+  A++    F+E SAKTR+ V+  FEEL  KI++ P L E     ++ 
Sbjct: 128 DN-REVDRNEGLKFARKHSMLFIEASAKTRDGVQCAFEELVEKILQTPGLWESS---IQN 187

Query: 194 NILKQQEFQPASSPSC 209
           + ++  + +P    +C
Sbjct: 188 HGVQLSDNEPQRQGAC 198

[Close]

BLAST of HG10020203 vs. ExPASy Swiss-Prot
Match: P36862 (GTP-binding protein yptV3 OS=Volvox carteri OX=3067 GN=YPTV3 PE=3 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 2.4e-49
Identity = 101/176 (57.39%), Postives = 127/176 (72.16%), Query Frame = 0


Query: 10  NYDLSFKVLLIGDSGVGKSSLLLSFIS-TNADNLAPTIGVDFKIKLLKVGGKRLKLTIWD 69
           ++D +FKVLL+GDSGVGKS +L  F S    ++   TIGVDFK+K L   GKR KLTIWD
Sbjct: 5   SHDYTFKVLLVGDSGVGKSCILTRFTSGIFEESTTSTIGVDFKVKYLTADGKRCKLTIWD 64

Query: 70  TAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVELYSTNKDCVKMLIGN 129
           TAGQERFRTLTSSYYRGAQGII VYDVTRR+TF +L   W +E ++YST +  +KM++ N
Sbjct: 65  TAGQERFRTLTSSYYRGAQGIIFVYDVTRRDTFESLEANWMREFDIYSTVESAIKMVVAN 124

Query: 130 KVDRESERAVSREEGIALAKELGSYFLECSAKTRENVEKCFEELALKIMEAPSLIE 185
           KVD  ++R VS EEG   A+  G  F+E SA+    V + FEEL LKI++ P L+E
Sbjct: 125 KVDLSAQRQVSSEEGHDFARRHGCLFVETSARANLAVGQAFEELLLKILDTPLLLE 180

[Close]

BLAST of HG10020203 vs. ExPASy TrEMBL
Match: A0A0A0LGE4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G743430 PE=4 SV=1)

HSP 1 Score: 401.4 bits (1030), Expect = 2.4e-108
Identity = 206/210 (98.10%), Postives = 208/210 (99.05%), Query Frame = 0


Query: 1   MGSSSGQSSNYDLSFKVLLIGDSGVGKSSLLLSFISTNADNLAPTIGVDFKIKLLKVGGK 60
           MGSSSGQSSNYDLSFKVLLIGDSGVGKSSLLLSFISTNADNLAPTIGVDFKIKLLKVGGK
Sbjct: 1   MGSSSGQSSNYDLSFKVLLIGDSGVGKSSLLLSFISTNADNLAPTIGVDFKIKLLKVGGK 60

Query: 61  RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVELYSTNKD 120
           RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVELYSTNKD
Sbjct: 61  RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVELYSTNKD 120

Query: 121 CVKMLIGNKVDRESERAVSREEGIALAKELGSYFLECSAKTRENVEKCFEELALKIMEAP 180
           CVKMLIGNKVDRESERAVSREEGIALAK LGSYFLECSAKTRENVEKCFE+LALKIMEAP
Sbjct: 121 CVKMLIGNKVDRESERAVSREEGIALAKVLGSYFLECSAKTRENVEKCFEDLALKIMEAP 180

Query: 181 SLIEEGSTVVKRNILKQQEFQPASSPSCCL 211
           SLIEEGSTVVKRNILKQQEFQPAS+ SCCL
Sbjct: 181 SLIEEGSTVVKRNILKQQEFQPASTTSCCL 210

[Close]

BLAST of HG10020203 vs. ExPASy TrEMBL
Match: A0A5A7TKX7 (Ras-related protein RABC2a OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G002940 PE=4 SV=1)

HSP 1 Score: 399.1 bits (1024), Expect = 1.2e-107
Identity = 206/210 (98.10%), Postives = 207/210 (98.57%), Query Frame = 0


Query: 1   MGSSSGQSSNYDLSFKVLLIGDSGVGKSSLLLSFISTNADNLAPTIGVDFKIKLLKVGGK 60
           MGSSSGQSSNYDLSFKVLLIGDSGVGKSSLLLSFISTNADNLAPTIGVDFKIKLLKVGGK
Sbjct: 1   MGSSSGQSSNYDLSFKVLLIGDSGVGKSSLLLSFISTNADNLAPTIGVDFKIKLLKVGGK 60

Query: 61  RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVELYSTNKD 120
           RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVELYSTNKD
Sbjct: 61  RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVELYSTNKD 120

Query: 121 CVKMLIGNKVDRESERAVSREEGIALAKELGSYFLECSAKTRENVEKCFEELALKIMEAP 180
           CVKMLIGNKVDRESERAVSREEGIALAK LGS FLECSAKTRENVEKCFEELALKIMEAP
Sbjct: 121 CVKMLIGNKVDRESERAVSREEGIALAKVLGSCFLECSAKTRENVEKCFEELALKIMEAP 180

Query: 181 SLIEEGSTVVKRNILKQQEFQPASSPSCCL 211
           SLIEEGSTVVKRNILKQQEFQPAS+ SCCL
Sbjct: 181 SLIEEGSTVVKRNILKQQEFQPASTTSCCL 210

[Close]

BLAST of HG10020203 vs. ExPASy TrEMBL
Match: A0A1S3B6E7 (ras-related protein RABC2a OS=Cucumis melo OX=3656 GN=LOC103486521 PE=4 SV=1)

HSP 1 Score: 399.1 bits (1024), Expect = 1.2e-107
Identity = 206/210 (98.10%), Postives = 207/210 (98.57%), Query Frame = 0


Query: 1   MGSSSGQSSNYDLSFKVLLIGDSGVGKSSLLLSFISTNADNLAPTIGVDFKIKLLKVGGK 60
           MGSSSGQSSNYDLSFKVLLIGDSGVGKSSLLLSFISTNADNLAPTIGVDFKIKLLKVGGK
Sbjct: 1   MGSSSGQSSNYDLSFKVLLIGDSGVGKSSLLLSFISTNADNLAPTIGVDFKIKLLKVGGK 60

Query: 61  RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVELYSTNKD 120
           RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVELYSTNKD
Sbjct: 61  RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVELYSTNKD 120

Query: 121 CVKMLIGNKVDRESERAVSREEGIALAKELGSYFLECSAKTRENVEKCFEELALKIMEAP 180
           CVKMLIGNKVDRESERAVSREEGIALAK LGS FLECSAKTRENVEKCFEELALKIMEAP
Sbjct: 121 CVKMLIGNKVDRESERAVSREEGIALAKVLGSCFLECSAKTRENVEKCFEELALKIMEAP 180

Query: 181 SLIEEGSTVVKRNILKQQEFQPASSPSCCL 211
           SLIEEGSTVVKRNILKQQEFQPAS+ SCCL
Sbjct: 181 SLIEEGSTVVKRNILKQQEFQPASTTSCCL 210

[Close]

BLAST of HG10020203 vs. ExPASy TrEMBL
Match: A0A6J1KU45 (ras-related protein RABC2a-like OS=Cucurbita maxima OX=3661 GN=LOC111498270 PE=4 SV=1)

HSP 1 Score: 392.5 bits (1007), Expect = 1.1e-105
Identity = 201/210 (95.71%), Postives = 206/210 (98.10%), Query Frame = 0


Query: 1   MGSSSGQSSNYDLSFKVLLIGDSGVGKSSLLLSFISTNADNLAPTIGVDFKIKLLKVGGK 60
           MGSSSGQSSNYDLSFKVLLIGDSGVGKSSLLLSFISTNA+NLAPTIGVDFKIKLL+VGGK
Sbjct: 1   MGSSSGQSSNYDLSFKVLLIGDSGVGKSSLLLSFISTNAENLAPTIGVDFKIKLLQVGGK 60

Query: 61  RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVELYSTNKD 120
           RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETF NLSDVWAKEVELYSTNK+
Sbjct: 61  RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFDNLSDVWAKEVELYSTNKE 120

Query: 121 CVKMLIGNKVDRESERAVSREEGIALAKELGSYFLECSAKTRENVEKCFEELALKIMEAP 180
           CVKMLIGNKVDRESERAVSREEGIALAKELGS+FLECSAKTRENVEKCFEELALKIMEAP
Sbjct: 121 CVKMLIGNKVDRESERAVSREEGIALAKELGSFFLECSAKTRENVEKCFEELALKIMEAP 180

Query: 181 SLIEEGSTVVKRNILKQQEFQPASSPSCCL 211
           SLIEEGSTVVKRNILKQQE QPA + SCCL
Sbjct: 181 SLIEEGSTVVKRNILKQQELQPAPTASCCL 210

[Close]

BLAST of HG10020203 vs. ExPASy TrEMBL
Match: A0A6J1FET8 (ras-related protein RABC2a-like OS=Cucurbita moschata OX=3662 GN=LOC111443418 PE=4 SV=1)

HSP 1 Score: 390.6 bits (1002), Expect = 4.2e-105
Identity = 200/210 (95.24%), Postives = 206/210 (98.10%), Query Frame = 0


Query: 1   MGSSSGQSSNYDLSFKVLLIGDSGVGKSSLLLSFISTNADNLAPTIGVDFKIKLLKVGGK 60
           MGSSSGQSSNYDLSFKVLLIGDSGVGKSSLLLSFIST+A+NLAPTIGVDFKIKLL+VGGK
Sbjct: 1   MGSSSGQSSNYDLSFKVLLIGDSGVGKSSLLLSFISTSAENLAPTIGVDFKIKLLQVGGK 60

Query: 61  RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVELYSTNKD 120
           RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETF NLSDVWAKEVELYSTNK+
Sbjct: 61  RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFDNLSDVWAKEVELYSTNKE 120

Query: 121 CVKMLIGNKVDRESERAVSREEGIALAKELGSYFLECSAKTRENVEKCFEELALKIMEAP 180
           CVKMLIGNKVDRESERAVSREEGIALAKELGS+FLECSAKTRENVEKCFEELALKIMEAP
Sbjct: 121 CVKMLIGNKVDRESERAVSREEGIALAKELGSFFLECSAKTRENVEKCFEELALKIMEAP 180

Query: 181 SLIEEGSTVVKRNILKQQEFQPASSPSCCL 211
           SLIEEGSTVVKRNILKQQE QPA + SCCL
Sbjct: 181 SLIEEGSTVVKRNILKQQELQPAPTASCCL 210

[Close]

BLAST of HG10020203 vs. TAIR 10
Match: AT5G03530.1 (RAB GTPase homolog C2A )

HSP 1 Score: 336.7 bits (862), Expect = 1.4e-92
Identity = 172/210 (81.90%), Postives = 190/210 (90.48%), Query Frame = 0


Query: 1   MGSSSGQSSNYDLSFKVLLIGDSGVGKSSLLLSFISTNADNLAPTIGVDFKIKLLKVGGK 60
           MGSSSGQ S YDLSFK+LLIGDSGVGKSSLL+SFIS++ ++LAPTIGVDFKIK L VGGK
Sbjct: 1   MGSSSGQ-SGYDLSFKILLIGDSGVGKSSLLVSFISSSVEDLAPTIGVDFKIKQLTVGGK 60

Query: 61  RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVELYSTNKD 120
           RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNL DVW KE+ELYSTN++
Sbjct: 61  RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLVDVWGKEIELYSTNQE 120

Query: 121 CVKMLIGNKVDRESERAVSREEGIALAKELGSYFLECSAKTRENVEKCFEELALKIMEAP 180
           CV+ML+GNKVDRESER VSREEGIALAKEL   FLECSA+TR+NVE+CFEELALKIME P
Sbjct: 121 CVRMLVGNKVDRESERGVSREEGIALAKELNCMFLECSARTRQNVEQCFEELALKIMEVP 180

Query: 181 SLIEEGSTVVKRNILKQQ-EFQPASSPSCC 210
           SL+EEGS+ VKRNILKQ+ E Q  +   CC
Sbjct: 181 SLLEEGSSAVKRNILKQKPEHQTNTQSGCC 209

[Close]

BLAST of HG10020203 vs. TAIR 10
Match: AT3G09910.1 (RAB GTPase homolog C2B )

HSP 1 Score: 310.5 bits (794), Expect = 1.1e-84
Identity = 156/192 (81.25%), Postives = 176/192 (91.67%), Query Frame = 0


Query: 1   MGSSSGQSSNYDLSFKVLLIGDSGVGKSSLLLSFISTNADNLAPTIGVDFKIKLLKVGGK 60
           MGSSSGQ S YDLSFK+LLIGDSGVGKSSLLLSFIS++ ++LAPTIGVDFKIK +KV GK
Sbjct: 1   MGSSSGQ-SGYDLSFKILLIGDSGVGKSSLLLSFISSSVEDLAPTIGVDFKIKQMKVRGK 60

Query: 61  RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVELYSTNKD 120
           RLKLTIWDTAGQE+FRTLTSSY+RG+QGIILVYDVT+RETF NL+D+WAKE+ELYSTN D
Sbjct: 61  RLKLTIWDTAGQEKFRTLTSSYFRGSQGIILVYDVTKRETFLNLADIWAKEIELYSTNHD 120

Query: 121 CVKMLIGNKVDRESERAVSREEGIALAKELGSYFLECSAKTRENVEKCFEELALKIMEAP 180
           C+KML+GNKVDRESER VSREEG+ALAK+L   F ECSA+TRENV  CFEELALKIME P
Sbjct: 121 CIKMLVGNKVDRESERKVSREEGMALAKDLNCLFHECSARTRENVNGCFEELALKIMEVP 180

Query: 181 SLIEEGSTVVKR 193
           SL+EEGS+ VKR
Sbjct: 181 SLLEEGSSSVKR 191

[Close]

BLAST of HG10020203 vs. TAIR 10
Match: AT3G09910.2 (RAB GTPase homolog C2B )

HSP 1 Score: 310.5 bits (794), Expect = 1.1e-84
Identity = 156/192 (81.25%), Postives = 176/192 (91.67%), Query Frame = 0


Query: 1   MGSSSGQSSNYDLSFKVLLIGDSGVGKSSLLLSFISTNADNLAPTIGVDFKIKLLKVGGK 60
           MGSSSGQ S YDLSFK+LLIGDSGVGKSSLLLSFIS++ ++LAPTIGVDFKIK +KV GK
Sbjct: 1   MGSSSGQ-SGYDLSFKILLIGDSGVGKSSLLLSFISSSVEDLAPTIGVDFKIKQMKVRGK 60

Query: 61  RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVELYSTNKD 120
           RLKLTIWDTAGQE+FRTLTSSY+RG+QGIILVYDVT+RETF NL+D+WAKE+ELYSTN D
Sbjct: 61  RLKLTIWDTAGQEKFRTLTSSYFRGSQGIILVYDVTKRETFLNLADIWAKEIELYSTNHD 120

Query: 121 CVKMLIGNKVDRESERAVSREEGIALAKELGSYFLECSAKTRENVEKCFEELALKIMEAP 180
           C+KML+GNKVDRESER VSREEG+ALAK+L   F ECSA+TRENV  CFEELALKIME P
Sbjct: 121 CIKMLVGNKVDRESERKVSREEGMALAKDLNCLFHECSARTRENVNGCFEELALKIMEVP 180

Query: 181 SLIEEGSTVVKR 193
           SL+EEGS+ VKR
Sbjct: 181 SLLEEGSSSVKR 191

[Close]

BLAST of HG10020203 vs. TAIR 10
Match: AT3G09910.3 (RAB GTPase homolog C2B )

HSP 1 Score: 310.5 bits (794), Expect = 1.1e-84
Identity = 156/192 (81.25%), Postives = 176/192 (91.67%), Query Frame = 0


Query: 1   MGSSSGQSSNYDLSFKVLLIGDSGVGKSSLLLSFISTNADNLAPTIGVDFKIKLLKVGGK 60
           MGSSSGQ S YDLSFK+LLIGDSGVGKSSLLLSFIS++ ++LAPTIGVDFKIK +KV GK
Sbjct: 1   MGSSSGQ-SGYDLSFKILLIGDSGVGKSSLLLSFISSSVEDLAPTIGVDFKIKQMKVRGK 60

Query: 61  RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVELYSTNKD 120
           RLKLTIWDTAGQE+FRTLTSSY+RG+QGIILVYDVT+RETF NL+D+WAKE+ELYSTN D
Sbjct: 61  RLKLTIWDTAGQEKFRTLTSSYFRGSQGIILVYDVTKRETFLNLADIWAKEIELYSTNHD 120

Query: 121 CVKMLIGNKVDRESERAVSREEGIALAKELGSYFLECSAKTRENVEKCFEELALKIMEAP 180
           C+KML+GNKVDRESER VSREEG+ALAK+L   F ECSA+TRENV  CFEELALKIME P
Sbjct: 121 CIKMLVGNKVDRESERKVSREEGMALAKDLNCLFHECSARTRENVNGCFEELALKIMEVP 180

Query: 181 SLIEEGSTVVKR 193
           SL+EEGS+ VKR
Sbjct: 181 SLLEEGSSSVKR 191

[Close]

BLAST of HG10020203 vs. TAIR 10
Match: AT1G43890.1 (RAB GTPASE HOMOLOG B18 )

HSP 1 Score: 303.9 bits (777), Expect = 9.9e-83
Identity = 154/211 (72.99%), Postives = 177/211 (83.89%), Query Frame = 0


Query: 1   MGSSSGQSSNYDLSFKVLLIGDSGVGKSSLLLSFISTNADNLAPTIGVDFKIKLLKVGGK 60
           MGSSSGQ   +D  FKVLLIGDSGVGKSSLLLSF S   D+L+PTIGVDFK+K L +G K
Sbjct: 1   MGSSSGQ-PEFDYLFKVLLIGDSGVGKSSLLLSFTSNTFDDLSPTIGVDFKVKYLTIGEK 60

Query: 61  RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVELYSTNKD 120
           +LKL IWDTAGQERFRTLTSSYYRGAQGII+VYDVTRR+TFTNLSD+WAKE++LYSTN+D
Sbjct: 61  KLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDIWAKEIDLYSTNQD 120

Query: 121 CVKMLIGNKVDRESERAVSREEGIALAKELGSYFLECSAKTRENVEKCFEELALKIMEAP 180
           C+KML+GNKVD+ESERAVS++EGI  A+E G  FLECSAKTR NVE+CFEEL LKI+E P
Sbjct: 121 CIKMLVGNKVDKESERAVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILETP 180

Query: 181 SLIEEGSTVVKRNILKQQEFQPASSPS--CC 210
           SL  EGS+  K+NI KQ   Q  S+ S  CC
Sbjct: 181 SLTAEGSSGGKKNIFKQNPAQTTSTSSSYCC 210

The following BLAST results are available for this feature:

BLAST of HG10020203 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038905103.1	4.4e-109	98.57	ras-related protein RABC2a-like [Benincasa hispida]	[more]
XP_004137847.1	4.9e-108	98.10	ras-related protein RABC2a [Cucumis sativus] >KGN59006.1 hypothetical protein Cs...	[more]
XP_008442732.1	2.4e-107	98.10	PREDICTED: ras-related protein RABC2a [Cucumis melo] >KAA0043972.1 ras-related p...	[more]
XP_023005146.1	2.3e-105	95.71	ras-related protein RABC2a-like [Cucurbita maxima] >XP_023541000.1 ras-related p...	[more]
XP_022936998.1	8.7e-105	95.24	ras-related protein RABC2a-like [Cucurbita moschata]	[more]

BLAST of HG10020203 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O49841	1.9e-91	81.90	Ras-related protein RABC2a OS=Arabidopsis thaliana OX=3702 GN=RABC2A PE=1 SV=1	[more]
Q9SF92	1.5e-83	81.25	Ras-related protein RABC2b OS=Arabidopsis thaliana OX=3702 GN=RABC2B PE=2 SV=1	[more]
O23657	1.4e-81	72.99	Ras-related protein RABC1 OS=Arabidopsis thaliana OX=3702 GN=RABC1 PE=1 SV=1	[more]
Q6DHC1	1.4e-49	52.55	Ras-related protein Rab-18-B OS=Danio rerio OX=7955 GN=rab18b PE=2 SV=1	[more]
P36862	2.4e-49	57.39	GTP-binding protein yptV3 OS=Volvox carteri OX=3067 GN=YPTV3 PE=3 SV=1	[more]

BLAST of HG10020203 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LGE4	2.4e-108	98.10	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G743430 PE=4 SV=1	[more]
A0A5A7TKX7	1.2e-107	98.10	Ras-related protein RABC2a OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
A0A1S3B6E7	1.2e-107	98.10	ras-related protein RABC2a OS=Cucumis melo OX=3656 GN=LOC103486521 PE=4 SV=1	[more]
A0A6J1KU45	1.1e-105	95.71	ras-related protein RABC2a-like OS=Cucurbita maxima OX=3661 GN=LOC111498270 PE=4...	[more]
A0A6J1FET8	4.2e-105	95.24	ras-related protein RABC2a-like OS=Cucurbita moschata OX=3662 GN=LOC111443418 PE...	[more]

BLAST of HG10020203 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G03530.1	1.4e-92	81.90	RAB GTPase homolog C2A	[more]
AT3G09910.1	1.1e-84	81.25	RAB GTPase homolog C2B	[more]
AT3G09910.2	1.1e-84	81.25	RAB GTPase homolog C2B	[more]
AT3G09910.3	1.1e-84	81.25	RAB GTPase homolog C2B	[more]
AT1G43890.1	9.9e-83	72.99	RAB GTPASE HOMOLOG B18	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 37..53 score: 29.45 coord: 15..36 score: 52.24 coord: 55..77 score: 50.87 coord: 119..132 score: 40.01 coord: 154..176 score: 43.7
None	No IPR available	SMART	SM00177	arf_sub_2	coord: 1..180 e-value: 0.0066 score: -2.1
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 20..210 e-value: 1.2E-4 score: 17.0
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 15..179 e-value: 2.4E-94 score: 329.4
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 12..179 e-value: 6.0E-29 score: 112.2
None	No IPR available	PANTHER	PTHR24073:SF1138	SMALL MONOMERIC GTPASE-RELATED	coord: 1..209
None	No IPR available	PANTHER	PTHR24073	DRAB5-RELATED	coord: 1..209
None	No IPR available	PROSITE	PS51419	RAB	coord: 10..210 score: 32.036507
None	No IPR available	PROSITE	PS51420	RHO	coord: 8..179 score: 9.793909
None	No IPR available	CDD	cd01863	Rab18	coord: 15..176 e-value: 1.38761E-96 score: 276.114
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 17..180 e-value: 9.4E-14 score: 55.8
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 16..177 e-value: 3.1E-54 score: 182.9
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 7..210 score: 16.873421
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 15..171 e-value: 7.6E-27 score: 92.1
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 5..205 e-value: 6.4E-63 score: 213.7
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 11..198

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10020203.1	HG10020203.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
cellular_component	GO:0012505	endomembrane system
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding