HG10020077 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10020077
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Protein GL2-INTERACTING REPRESSOR 1
Location	Chr04: 28581472 .. 28581834 (-)
RNA-Seq Expression	HG10020077
Synteny	HG10020077

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCAGAAGAAGCAGTGGAAGTGTTCCAAAGCTTGAGTTGAAGCTGAACCTGTCGCCGCCACGGCCACATCCGTTGATGTCATCGCCGAGCCGATCAGCGACGGTGTCGCCCACATCGCCACCAAGCTCATGCGTGTCGTCGGAGCTAAACCAGGACGACGGCGGGGCTGCTCTCCGATATTCAAGCAGCCCGGAAGCCACATCGATGGTGCTGGTCGGCTGCCCTCGGTGTCTCATGTACGTGATGCTGTCGGAGAATGAACCCAAATGCCCAAAATGCAAGAGCTCTGTTTTGCTTGATTTTCTCCATGACGGCGCCGCCTCAGCTCCGCCGTCCACGACCGCCGCCAGGAAGATCTAG

mRNA sequence

ATGAGCAGAAGAAGCAGTGGAAGTGTTCCAAAGCTTGAGTTGAAGCTGAACCTGTCGCCGCCACGGCCACATCCGTTGATGTCATCGCCGAGCCGATCAGCGACGGTGTCGCCCACATCGCCACCAAGCTCATGCGTGTCGTCGGAGCTAAACCAGGACGACGGCGGGGCTGCTCTCCGATATTCAAGCAGCCCGGAAGCCACATCGATGGTGCTGGTCGGCTGCCCTCGGTGTCTCATGTACGTGATGCTGTCGGAGAATGAACCCAAATGCCCAAAATGCAAGAGCTCTGTTTTGCTTGATTTTCTCCATGACGGCGCCGCCTCAGCTCCGCCGTCCACGACCGCCGCCAGGAAGATCTAG

Coding sequence (CDS)

ATGAGCAGAAGAAGCAGTGGAAGTGTTCCAAAGCTTGAGTTGAAGCTGAACCTGTCGCCGCCACGGCCACATCCGTTGATGTCATCGCCGAGCCGATCAGCGACGGTGTCGCCCACATCGCCACCAAGCTCATGCGTGTCGTCGGAGCTAAACCAGGACGACGGCGGGGCTGCTCTCCGATATTCAAGCAGCCCGGAAGCCACATCGATGGTGCTGGTCGGCTGCCCTCGGTGTCTCATGTACGTGATGCTGTCGGAGAATGAACCCAAATGCCCAAAATGCAAGAGCTCTGTTTTGCTTGATTTTCTCCATGACGGCGCCGCCTCAGCTCCGCCGTCCACGACCGCCGCCAGGAAGATCTAG

Protein sequence

MSRRSSGSVPKLELKLNLSPPRPHPLMSSPSRSATVSPTSPPSSCVSSELNQDDGGAALRYSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKCKSSVLLDFLHDGAASAPPSTTAARKI

Homology

[Close]

BLAST of HG10020077 vs. NCBI nr
Match: XP_008442891.1 (PREDICTED: uncharacterized protein LOC103486655 [Cucumis melo] >KAA0043838.1 uncharacterized protein E6C27_scaffold236G001730 [Cucumis melo var. makuwa] >TYK04712.1 uncharacterized protein E5676_scaffold23737G00010 [Cucumis melo var. makuwa])

HSP 1 Score: 233.0 bits (593), Expect = 1.3e-57
Identity = 119/120 (99.17%), Postives = 120/120 (100.00%), Query Frame = 0


Query: 1   MSRRSSGSVPKLELKLNLSPPRPHPLMSSPSRSATVSPTSPPSSCVSSELNQDDGGAALR 60
           MSRRSSGSVPKLELKLNLSPPRPHPL+SSPSRSATVSPTSPPSSCVSSELNQDDGGAALR
Sbjct: 1   MSRRSSGSVPKLELKLNLSPPRPHPLVSSPSRSATVSPTSPPSSCVSSELNQDDGGAALR 60

Query: 61  YSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKCKSSVLLDFLHDGAASAPPSTTAARKI 120
           YSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKCKSSVLLDFLHDGAASAPPSTTAARKI
Sbjct: 61  YSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKCKSSVLLDFLHDGAASAPPSTTAARKI 120

[Close]

BLAST of HG10020077 vs. NCBI nr
Match: XP_031737841.1 (uncharacterized protein LOC101204832 [Cucumis sativus] >KGN59178.1 hypothetical protein Csa_000798 [Cucumis sativus])

HSP 1 Score: 231.5 bits (589), Expect = 3.8e-57
Identity = 118/120 (98.33%), Postives = 119/120 (99.17%), Query Frame = 0


Query: 1   MSRRSSGSVPKLELKLNLSPPRPHPLMSSPSRSATVSPTSPPSSCVSSELNQDDGGAALR 60
           MSRRSSGSVPKLELKLNLSPPRPHPL+SSPSRSATVSPTSPPSSCVSSELNQDDGGA LR
Sbjct: 1   MSRRSSGSVPKLELKLNLSPPRPHPLVSSPSRSATVSPTSPPSSCVSSELNQDDGGAGLR 60

Query: 61  YSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKCKSSVLLDFLHDGAASAPPSTTAARKI 120
           YSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKCKSSVLLDFLHDGAASAPPSTTAARKI
Sbjct: 61  YSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKCKSSVLLDFLHDGAASAPPSTTAARKI 120

[Close]

BLAST of HG10020077 vs. NCBI nr
Match: XP_038905681.1 (uncharacterized protein LOC120091651 [Benincasa hispida])

HSP 1 Score: 226.9 bits (577), Expect = 9.5e-56
Identity = 116/120 (96.67%), Postives = 117/120 (97.50%), Query Frame = 0


Query: 1   MSRRSSGSVPKLELKLNLSPPRPHPLMSSPSRSATVSPTSPPSSCVSSELNQDDGGAALR 60
           MSRRSSGSVPKLELKLNLSPPRPHPL SSPSRSATVSPTSPPSSCVSSELNQDDGGA+LR
Sbjct: 1   MSRRSSGSVPKLELKLNLSPPRPHPLASSPSRSATVSPTSPPSSCVSSELNQDDGGASLR 60

Query: 61  YSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKCKSSVLLDFLHDGAASAPPSTTAARKI 120
           YSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKCKSSVLLDFLHDGAASAPPS  AARKI
Sbjct: 61  YSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKCKSSVLLDFLHDGAASAPPSRAAARKI 120

[Close]

BLAST of HG10020077 vs. NCBI nr
Match: XP_023528090.1 (early nodulin-20-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 217.2 bits (552), Expect = 7.5e-53
Identity = 112/120 (93.33%), Postives = 114/120 (95.00%), Query Frame = 0


Query: 1   MSRRSSGSVPKLELKLNLSPPRPHPLMSSPSRSATVSPTSPPSSCVSSELNQDDGGAALR 60
           MSRRSSGSVPKLELKLNLSPPR HPL SSPSRSAT+SPTSPPSSCVS ELNQDD GAALR
Sbjct: 33  MSRRSSGSVPKLELKLNLSPPRQHPLGSSPSRSATLSPTSPPSSCVSLELNQDDSGAALR 92

Query: 61  YSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKCKSSVLLDFLHDGAASAPPSTTAARKI 120
           YSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKCKSSVLLDFLHDGAAS PPST AARK+
Sbjct: 93  YSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKCKSSVLLDFLHDGAASGPPSTGAARKM 152

[Close]

BLAST of HG10020077 vs. NCBI nr
Match: XP_023528091.1 (uncharacterized protein LOC111791110 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 217.2 bits (552), Expect = 7.5e-53
Identity = 112/120 (93.33%), Postives = 114/120 (95.00%), Query Frame = 0


Query: 1   MSRRSSGSVPKLELKLNLSPPRPHPLMSSPSRSATVSPTSPPSSCVSSELNQDDGGAALR 60
           MSRRSSGSVPKLELKLNLSPPR HPL SSPSRSAT+SPTSPPSSCVS ELNQDD GAALR
Sbjct: 33  MSRRSSGSVPKLELKLNLSPPRQHPLGSSPSRSATLSPTSPPSSCVSLELNQDDSGAALR 92

Query: 61  YSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKCKSSVLLDFLHDGAASAPPSTTAARKI 120
           YSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKCKSSVLLDFLHDGAAS PPST AARK+
Sbjct: 93  YSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKCKSSVLLDFLHDGAASGPPSTGAARKM 152

[Close]

BLAST of HG10020077 vs. ExPASy Swiss-Prot
Match: Q9FNI1 (Protein GL2-INTERACTING REPRESSOR 1 OS=Arabidopsis thaliana OX=3702 GN=GIR1 PE=1 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 3.9e-36
Identity = 84/119 (70.59%), Postives = 97/119 (81.51%), Query Frame = 0


Query: 1   MSRRSSGSVPKLELKLNLSPP--RPHPLMSSPSRSATVSPTSPPSSCVSSELNQDDGGAA 60
           MSRRS    PKLELKLNLSPP      ++ SPSRSAT SPTSPPSSCVSSE+NQD+   +
Sbjct: 1   MSRRS----PKLELKLNLSPPTSSQRRMVRSPSRSATTSPTSPPSSCVSSEMNQDE--PS 60

Query: 61  LRYSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKCKSSVLLDFLHDGAASAPPSTTAA 118
           +RYS+SPE TSMVLVGCPRCLMYVMLSE++PKCPKCKS+VLLDFLH+ A +A  +  AA
Sbjct: 61  VRYSTSPETTSMVLVGCPRCLMYVMLSEDDPKCPKCKSTVLLDFLHENATNANANAAAA 113

[Close]

BLAST of HG10020077 vs. ExPASy Swiss-Prot
Match: Q9SRN4 (Protein GL2-INTERACTING REPRESSOR 2 OS=Arabidopsis thaliana OX=3702 GN=GIR2 PE=1 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 5.8e-24
Identity = 66/116 (56.90%), Postives = 79/116 (68.10%), Query Frame = 0


Query: 1   MSRRSSGSVPKLELKLNLSPPRPHPLMSSPSRSATVSPTSPPSSCVSSELNQDDGGAALR 60
           MSRR+    PKLEL+LNLSPP       S  RS   S T+ PSSCVSSE NQ++      
Sbjct: 1   MSRRNKNG-PKLELRLNLSPPPSQASQMSLVRSPNRSNTTSPSSCVSSETNQEE------ 60

Query: 61  YSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKCKSSVLLDFLHDGAASAPPSTTA 117
              +   TSMVLVGCPRCLMYVMLS+++PKCPKCKS+VLLDFL + A +A  +T A
Sbjct: 61  ---NETITSMVLVGCPRCLMYVMLSDDDPKCPKCKSTVLLDFLQENAFAATTATAA 106

[Close]

BLAST of HG10020077 vs. ExPASy Swiss-Prot
Match: Q9FMS4 (Protein salt-induced and EIN3/EIL1-dependent 1 OS=Arabidopsis thaliana OX=3702 GN=SIED1 PE=1 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 6.3e-10
Identity = 41/93 (44.09%), Postives = 54/93 (58.06%), Query Frame = 0


Query: 12  LELKLNLSPPRPHPLMSSPSRSATVSPTSPPSSCVSSELNQDDGGAALRYSSSPEATSMV 71
           L+LKLN+SP     L++  S           SS + SE  +  GG         EA SMV
Sbjct: 11  LDLKLNISPSLDSSLLTESS-----------SSSLCSEEAEGGGG---------EAKSMV 70

Query: 72  LVGCPRCLMYVMLS-ENEPKCPKCKSSVLLDFL 104
           +VGCP C+MY++ S EN+P+CP+C S VLLDFL
Sbjct: 71  VVGCPNCIMYIITSLENDPRCPRCNSHVLLDFL 83

[Close]

BLAST of HG10020077 vs. ExPASy TrEMBL
Match: A0A5A7TLW3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold23737G00010 PE=4 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 6.4e-58
Identity = 119/120 (99.17%), Postives = 120/120 (100.00%), Query Frame = 0


Query: 1   MSRRSSGSVPKLELKLNLSPPRPHPLMSSPSRSATVSPTSPPSSCVSSELNQDDGGAALR 60
           MSRRSSGSVPKLELKLNLSPPRPHPL+SSPSRSATVSPTSPPSSCVSSELNQDDGGAALR
Sbjct: 1   MSRRSSGSVPKLELKLNLSPPRPHPLVSSPSRSATVSPTSPPSSCVSSELNQDDGGAALR 60

Query: 61  YSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKCKSSVLLDFLHDGAASAPPSTTAARKI 120
           YSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKCKSSVLLDFLHDGAASAPPSTTAARKI
Sbjct: 61  YSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKCKSSVLLDFLHDGAASAPPSTTAARKI 120

[Close]

BLAST of HG10020077 vs. ExPASy TrEMBL
Match: A0A1S3B7J8 (uncharacterized protein LOC103486655 OS=Cucumis melo OX=3656 GN=LOC103486655 PE=4 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 6.4e-58
Identity = 119/120 (99.17%), Postives = 120/120 (100.00%), Query Frame = 0


Query: 1   MSRRSSGSVPKLELKLNLSPPRPHPLMSSPSRSATVSPTSPPSSCVSSELNQDDGGAALR 60
           MSRRSSGSVPKLELKLNLSPPRPHPL+SSPSRSATVSPTSPPSSCVSSELNQDDGGAALR
Sbjct: 1   MSRRSSGSVPKLELKLNLSPPRPHPLVSSPSRSATVSPTSPPSSCVSSELNQDDGGAALR 60

Query: 61  YSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKCKSSVLLDFLHDGAASAPPSTTAARKI 120
           YSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKCKSSVLLDFLHDGAASAPPSTTAARKI
Sbjct: 61  YSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKCKSSVLLDFLHDGAASAPPSTTAARKI 120

[Close]

BLAST of HG10020077 vs. ExPASy TrEMBL
Match: A0A0A0LBI1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G778340 PE=4 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 1.9e-57
Identity = 118/120 (98.33%), Postives = 119/120 (99.17%), Query Frame = 0


Query: 1   MSRRSSGSVPKLELKLNLSPPRPHPLMSSPSRSATVSPTSPPSSCVSSELNQDDGGAALR 60
           MSRRSSGSVPKLELKLNLSPPRPHPL+SSPSRSATVSPTSPPSSCVSSELNQDDGGA LR
Sbjct: 1   MSRRSSGSVPKLELKLNLSPPRPHPLVSSPSRSATVSPTSPPSSCVSSELNQDDGGAGLR 60

Query: 61  YSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKCKSSVLLDFLHDGAASAPPSTTAARKI 120
           YSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKCKSSVLLDFLHDGAASAPPSTTAARKI
Sbjct: 61  YSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKCKSSVLLDFLHDGAASAPPSTTAARKI 120

[Close]

BLAST of HG10020077 vs. ExPASy TrEMBL
Match: A0A6J1F871 (uncharacterized protein LOC111441745 OS=Cucurbita moschata OX=3662 GN=LOC111441745 PE=4 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 8.1e-53
Identity = 111/120 (92.50%), Postives = 113/120 (94.17%), Query Frame = 0


Query: 1   MSRRSSGSVPKLELKLNLSPPRPHPLMSSPSRSATVSPTSPPSSCVSSELNQDDGGAALR 60
           MSRRSSGSVPKLELKLNLSPPR HPL SSPSRSAT+SPTSPPSSCVS ELNQDD  AALR
Sbjct: 1   MSRRSSGSVPKLELKLNLSPPRQHPLGSSPSRSATLSPTSPPSSCVSLELNQDDSSAALR 60

Query: 61  YSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKCKSSVLLDFLHDGAASAPPSTTAARKI 120
           YSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKCKSSVLLDFLHDGAAS PPST AARK+
Sbjct: 61  YSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKCKSSVLLDFLHDGAASGPPSTAAARKL 120

[Close]

BLAST of HG10020077 vs. ExPASy TrEMBL
Match: A0A6J1J6Y2 (uncharacterized protein LOC111481787 OS=Cucurbita maxima OX=3661 GN=LOC111481787 PE=4 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 1.1e-52
Identity = 111/120 (92.50%), Postives = 113/120 (94.17%), Query Frame = 0


Query: 1   MSRRSSGSVPKLELKLNLSPPRPHPLMSSPSRSATVSPTSPPSSCVSSELNQDDGGAALR 60
           MSRRSSGSVPKL+LKLNLSPPR HPL SSPSRSAT+SPTSPPSSCVS ELNQDD  AALR
Sbjct: 33  MSRRSSGSVPKLDLKLNLSPPRQHPLGSSPSRSATLSPTSPPSSCVSLELNQDDSSAALR 92

Query: 61  YSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKCKSSVLLDFLHDGAASAPPSTTAARKI 120
           YSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKCKSSVLLDFLHDGAAS PPST AARKI
Sbjct: 93  YSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKCKSSVLLDFLHDGAASGPPSTAAARKI 152

[Close]

BLAST of HG10020077 vs. TAIR 10
Match: AT5G06270.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11600.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 152.1 bits (383), Expect = 2.8e-37
Identity = 84/119 (70.59%), Postives = 97/119 (81.51%), Query Frame = 0


Query: 1   MSRRSSGSVPKLELKLNLSPP--RPHPLMSSPSRSATVSPTSPPSSCVSSELNQDDGGAA 60
           MSRRS    PKLELKLNLSPP      ++ SPSRSAT SPTSPPSSCVSSE+NQD+   +
Sbjct: 1   MSRRS----PKLELKLNLSPPTSSQRRMVRSPSRSATTSPTSPPSSCVSSEMNQDE--PS 60

Query: 61  LRYSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKCKSSVLLDFLHDGAASAPPSTTAA 118
           +RYS+SPE TSMVLVGCPRCLMYVMLSE++PKCPKCKS+VLLDFLH+ A +A  +  AA
Sbjct: 61  VRYSTSPETTSMVLVGCPRCLMYVMLSEDDPKCPKCKSTVLLDFLHENATNANANAAAA 113

[Close]

BLAST of HG10020077 vs. TAIR 10
Match: AT3G11600.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to karrikin; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G06270.1); Has 171 Blast hits to 171 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 171; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 111.7 bits (278), Expect = 4.1e-25
Identity = 66/116 (56.90%), Postives = 79/116 (68.10%), Query Frame = 0


Query: 1   MSRRSSGSVPKLELKLNLSPPRPHPLMSSPSRSATVSPTSPPSSCVSSELNQDDGGAALR 60
           MSRR+    PKLEL+LNLSPP       S  RS   S T+ PSSCVSSE NQ++      
Sbjct: 1   MSRRNKNG-PKLELRLNLSPPPSQASQMSLVRSPNRSNTTSPSSCVSSETNQEE------ 60

Query: 61  YSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKCKSSVLLDFLHDGAASAPPSTTA 117
              +   TSMVLVGCPRCLMYVMLS+++PKCPKCKS+VLLDFL + A +A  +T A
Sbjct: 61  ---NETITSMVLVGCPRCLMYVMLSDDDPKCPKCKSTVLLDFLQENAFAATTATAA 106

[Close]

BLAST of HG10020077 vs. TAIR 10
Match: AT5G22270.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11600.1); Has 136 Blast hits to 136 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 136; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 65.1 bits (157), Expect = 4.4e-11
Identity = 41/93 (44.09%), Postives = 54/93 (58.06%), Query Frame = 0


Query: 12  LELKLNLSPPRPHPLMSSPSRSATVSPTSPPSSCVSSELNQDDGGAALRYSSSPEATSMV 71
           L+LKLN+SP     L++  S           SS + SE  +  GG         EA SMV
Sbjct: 11  LDLKLNISPSLDSSLLTESS-----------SSSLCSEEAEGGGG---------EAKSMV 70

Query: 72  LVGCPRCLMYVMLS-ENEPKCPKCKSSVLLDFL 104
           +VGCP C+MY++ S EN+P+CP+C S VLLDFL
Sbjct: 71  VVGCPNCIMYIITSLENDPRCPRCNSHVLLDFL 83

[Close]

BLAST of HG10020077 vs. TAIR 10
Match: AT1G16500.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G79160.1); Has 136 Blast hits to 134 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 131; Viruses - 1; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 45.8 bits (107), Expect = 2.8e-05
Identity = 38/104 (36.54%), Postives = 52/104 (50.00%), Query Frame = 0


Query: 12  LELKL---NLSPPRPHPLMS-SPSRSATVSPTSPPSSCVSSELNQ-----------DDGG 71
           LELKL   ++S P P PL S SP++S +   +      V   L +           +D G
Sbjct: 142 LELKLVPSSISRPLPPPLSSFSPNQSLSYLSSVCTLDKVKLALERAEKDTKKRQSPEDDG 201

Query: 72  AALRYSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKCKSSVLL 101
                +S+  A S V  GCP CL YV +++N PKCP+C S V L
Sbjct: 202 VYDGTASATVAASQVAAGCPGCLSYVFVAKNNPKCPRCHSFVPL 245

[Close]

BLAST of HG10020077 vs. TAIR 10
Match: AT3G52561.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11600.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 45.1 bits (105), Expect = 4.8e-05
Identity = 26/69 (37.68%), Postives = 39/69 (56.52%), Query Frame = 0


Query: 37  SPTSPPSSCVSSELNQDD---GGAALRYSSSPEATSMVLVGCPRCLMYVMLSENEPKCPK 96
           SP+S  SS  +S L + +      A  +    EA  MV++GC  C+MYVM+ +   +CPK
Sbjct: 31  SPSSDTSSSQNSCLTRTEEVKEEVASSWVDEEEAPEMVVMGCRSCMMYVMVLQERQRCPK 90

Query: 97  CKSSVLLDF 103
           CK + L+ F
Sbjct: 91  CKCTDLIFF 99

The following BLAST results are available for this feature:

BLAST of HG10020077 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008442891.1	1.3e-57	99.17	PREDICTED: uncharacterized protein LOC103486655 [Cucumis melo] >KAA0043838.1 unc...	[more]
XP_031737841.1	3.8e-57	98.33	uncharacterized protein LOC101204832 [Cucumis sativus] >KGN59178.1 hypothetical ...	[more]
XP_038905681.1	9.5e-56	96.67	uncharacterized protein LOC120091651 [Benincasa hispida]	[more]
XP_023528090.1	7.5e-53	93.33	early nodulin-20-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_023528091.1	7.5e-53	93.33	uncharacterized protein LOC111791110 isoform X2 [Cucurbita pepo subsp. pepo]	[more]

BLAST of HG10020077 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FNI1	3.9e-36	70.59	Protein GL2-INTERACTING REPRESSOR 1 OS=Arabidopsis thaliana OX=3702 GN=GIR1 PE=1...	[more]
Q9SRN4	5.8e-24	56.90	Protein GL2-INTERACTING REPRESSOR 2 OS=Arabidopsis thaliana OX=3702 GN=GIR2 PE=1...	[more]
Q9FMS4	6.3e-10	44.09	Protein salt-induced and EIN3/EIL1-dependent 1 OS=Arabidopsis thaliana OX=3702 G...	[more]

BLAST of HG10020077 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TLW3	6.4e-58	99.17	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3B7J8	6.4e-58	99.17	uncharacterized protein LOC103486655 OS=Cucumis melo OX=3656 GN=LOC103486655 PE=...	[more]
A0A0A0LBI1	1.9e-57	98.33	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G778340 PE=4 SV=1	[more]
A0A6J1F871	8.1e-53	92.50	uncharacterized protein LOC111441745 OS=Cucurbita moschata OX=3662 GN=LOC1114417...	[more]
A0A6J1J6Y2	1.1e-52	92.50	uncharacterized protein LOC111481787 OS=Cucurbita maxima OX=3661 GN=LOC111481787...	[more]

BLAST of HG10020077 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G06270.1	2.8e-37	70.59	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G11600.1	4.1e-25	56.90	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response...	[more]
AT5G22270.1	4.4e-11	44.09	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G16500.1	2.8e-05	36.54	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G52561.1	4.8e-05	37.68	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 28..51
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..61
None	No IPR available	PANTHER	PTHR33177:SF47	BNAC02G02040D PROTEIN	coord: 3..116
None	No IPR available	PANTHER	PTHR33177	PUTATIVE-RELATED	coord: 3..116

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10020077.1	HG10020077.1	mRNA