HG10020068 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10020068
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Cytokinin riboside 5'-monophosphate phosphoribohydrolase
Location	Chr04: 28515032 .. 28518576 (+)
RNA-Seq Expression	HG10020068
Synteny	HG10020068

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGATACAAAGTCCAGATTCAAGAGAATTTGTGTTTTTTGTGGAAGCAGTTCTGGGAAGAAGCCTACCTACCAATCTGCAGCTATTGAACTTGGCCAAGAACTGGTATTTTTCCTCTCTCTCTCTCTCTCAACAATCCATGGAATTTAATTAAGATCCAAATTTCAGGGCTTTTCATATTCATGCATGTTCATTCTTTCATTTTCTTTTATTGCTTTTGCATTTTATTTCAATACCCATTTCAAAAAATTCCATCTTTTTGATACCCAAGTATCATTTATTGACTTTAGGAACCAAATTCAACCATATTTTGACATAAAGTCATTCCCTTAATATTCCTCTTTATTAATGCGCAATTAATCTCTTTCCCTTTTCTAAAAGTCTTCTCTTTTTCTTTCATTTCTAACCCATCAGCTTAAGCTTTTCTGATAATATTCCTGATTGAAGTTGAGGAAGGAGATGGAATAGGGTTTATGTTCATCTTCAACCATGAGAGAGAGAAAGACAGTGAGATTTGAGCTGTAACCTGCCTGTCAGTTAAGCAGCCTTCTTGCATGATCTAAAGAGGAAGTTTTAATTATCAAAATTTGAACTTCCCTCTTCTTTTAAAAAAAAGGGAAATTAAAATAATTAAAGGGTTTTGTATAAATATATTTTCAAAATGGGAAATTAAAAACCAAACGTGCTTGCTTGACATGATGAGAGTTTGAATGAGCGTGGTTTTCCTTAAACTTACCCCCATCGTTTCTCTTCACACTCTTCTATATTCCCCATTTCTCCCCCTAATTAATATCTCATTTCATTTCCCAATGCCCCCATTACTTATTTAAAAAATCAAAACTTTTTTTTTCATAATTCCTTTTTCTTGTTTAATGATTCAACTATGACACGTGTTGATTTTGATGTGTGTTTGAAGGTGGAAAGAAGGATTGATCTTGTTTATGGAGGTGGGAGCGTGGGATTGATGGGTCTTGTTTCTCAGGCTGTTCATGATGGCGGGCGCCATGTTCTAGGGTTTGTTTCTCTCTCTTCATAAATTTCTTCATAATTTCATGAATTTTTTACCTAAATTACCTATAAACTTAAAGCTATTAAATTGAGTTATGTAACATGTAATATCAATTTCTCGGTAATTCAAGCTTAAATTTTTTTCGTTTAGTGGCAATTTAATATAAAATACAAGTCATCATTGATTATGATGATGATTGTGAACTTTTTTTTTGGTACTTTGCTTCTCAAACAAACTTAATTAGCTTTGGTGTAGTTTTTGATATTTTATCATAAAGTTTTATTTTTTTTTAAACTCTCTTTTTGTAATGAATGGTAAAGATGGGAAATAAGAATGGTTTTTTAAAGGAGGAAAGGTGAAAAGTTTTTTTTTTTAACTGTTACAGACCAATTAATTTAAAGCCAGTTCTTGTCTGAAAAAAGATGGGGACTTTTCAAGATGTCCACTCGAAAGCCATACCTTTGGGGTTCGAATGTTGGGTTTTGTATTCATCACGAGGAGTGTCTATTGGATTTATGTTGTCCCCTCCATTTGTTGGGGACATAAAGCTCATGTTTTTTTTGTTTTTCCTTTGGAAGCCGACAGTTTTATTTCATTATTATTTGTAGAACACTGAGGAATTTATGGCTTTTGAGCTTTTATGTAGTCAATTTGAACATTGCTTCCAACATTTCTAGGAAAGTTCATCAAATGATTATTAATAACCTTTGTGTTTATTTTTCGTCCTTTTTTCAGAATAATTCCAAGAACCCTAATGCCTGTAGAGGTACACATTAAACACAAGTTTACAATTTTTACCATTTTTTCTTTTCCTTTGCTTTGAATGAATGGATTCTAAGTTTATAAATTTCGATAAGTTTAGATAACTGGAGAAACCGTTGGAGAAGTTAAACCGGTGTCGGATATGCACCAAAGGAAGGCCGAGATGGCTCGACAAGCCGATGCTTTCATCGCTTTACCAGGTACTCACTCTATAATTCAACATTCTAAATGATAAATTTGCGCATAAAAATGGATTATTAACTTTGCTTACAAATTGAATCTCATAGGAGGATATGGGACTCTTGAAGAGCTTCTTGAAGTTATTACATGGGCACAACTTGGAATCCATCGCAAGCCAGTGAGTACTAAAAGAATCTTTAATTTCTTCACTTTTTTGTACTCAATTTTTTTTATGTGAACATAATTTTGGATTGCTACATTAAAATTCTTAGGAATTTTCACTACAATTGGCAGACAGTTGAAACATTTGGTCTCATCTATAGATGACATGTCGTGTTCAAGGCATAATGATATTTAAAAAAAAAGAAATTCCATTGTCTCTGTTTGAAAATTGTTGAAATCATAATGGCCCTTTCACATGATATCCATGTTCTTGTTTGGTCCTTCATTTTATAATTCTATGATTATTAACCATATGGTTTCCCATGTCTTTTGGAAAAAACACACTAAAAAAGATGCCATTTTTCAACACCCTTTTGCTTGACAAACAAGTAAAAAAATCCCTTTTCCTCCCATTCCATTTCCTAAAGGGGTTTAAACCTTTAACCGCACTTGCAACCGAAATATAGTTTTCGGGTACTCACCTACTCGGGTTAAGTCAAGATCGATTCGATATGGATAACGGGTCAACCCGTAATCCTAATTTGTGGGACAATAACAATATCGTTTGGAATAGAGAATCAAAACATGTGATTCTTACTCCCAATTCACATGGGAAAGATTTCAAGCTAAAAAGATTTCCCCTTCCAAAGTCCCAATCATGACACAATTATGAATTGGACTTGTATATATATATTGATGGACTTTTAAAGAAAAAAAAAAGAAATAAATTAAATTGGTGGTCAAAGGAAGCTGTTTGATTTTTTTTTAATTAAGCATTGATTAAGAACAGAATTAAATTTAAAAAAATGATTAAAATATTGCAGGTGGGATTGTTGAATGTGGATGGATATTACAATTCGTTGCTAAGTTTCATTGATAAGGCAGTTGATGAAGGCTTTGTTTCTCCAACTGCACGTCGTATTATTGTGTCTGCTCCAACTGCCAAGGCTTTAGTCAGACAACTTGAGGTACTCTTTTTTTTTCTTTTCTTTCAAATTAACTATTTTTCTTATTTTTTTTGTTTTAGTTACTTTTTAAGGGCAATATGTTCCTAATTCAAAAGGCAACTTCACATTCCAGCCTTTAGTTAAGGGTATCCCCTACACTTTCCCATTTCTACGGAAATGGGTAGTGTCCCACTTGTTTAATTAAAATATAATCTTTGGGTATTAATTGGGGTTTTGGGGCTTTAATTATATTCTAATTACATGAACTGGCACACAAGAATTTAATTAATTAGAAACTGGCCCCTGGAGAATAGGGAATTTGTAGCTTTTTTTAAATAAAATTATAGGGGGATTATAAGTTTGTGTTTTTTTGGTAATTACGACAGGAATACGTACCGGAGTACGACGAGATAACGTCACAGTTGGTGTGGGAAGATGTTGACAGGAGAAGTTACGTGGCCGAATCAGAGATTGCCACGTAA

mRNA sequence

ATGGAAGATACAAAGTCCAGATTCAAGAGAATTTGTGTTTTTTGTGGAAGCAGTTCTGGGAAGAAGCCTACCTACCAATCTGCAGCTATTGAACTTGGCCAAGAACTGGTGGAAAGAAGGATTGATCTTGTTTATGGAGGTGGGAGCGTGGGATTGATGGGTCTTGTTTCTCAGGCTGTTCATGATGGCGGGCGCCATGTTCTAGGAATAATTCCAAGAACCCTAATGCCTGTAGAGGTGGGATTGTTGAATGTGGATGGATATTACAATTCGTTGCTAAGTTTCATTGATAAGGCAGTTGATGAAGGCTTTGTTTCTCCAACTGCACGTCGTATTATTGTGTCTGCTCCAACTGCCAAGGCTTTAGTCAGACAACTTGAGGAATACGTACCGGAGTACGACGAGATAACGTCACAGTTGGTGTGGGAAGATGTTGACAGGAGAAGTTACGTGGCCGAATCAGAGATTGCCACGTAA

Coding sequence (CDS)

ATGGAAGATACAAAGTCCAGATTCAAGAGAATTTGTGTTTTTTGTGGAAGCAGTTCTGGGAAGAAGCCTACCTACCAATCTGCAGCTATTGAACTTGGCCAAGAACTGGTGGAAAGAAGGATTGATCTTGTTTATGGAGGTGGGAGCGTGGGATTGATGGGTCTTGTTTCTCAGGCTGTTCATGATGGCGGGCGCCATGTTCTAGGAATAATTCCAAGAACCCTAATGCCTGTAGAGGTGGGATTGTTGAATGTGGATGGATATTACAATTCGTTGCTAAGTTTCATTGATAAGGCAGTTGATGAAGGCTTTGTTTCTCCAACTGCACGTCGTATTATTGTGTCTGCTCCAACTGCCAAGGCTTTAGTCAGACAACTTGAGGAATACGTACCGGAGTACGACGAGATAACGTCACAGTTGGTGTGGGAAGATGTTGACAGGAGAAGTTACGTGGCCGAATCAGAGATTGCCACGTAA

Protein sequence

MEDTKSRFKRICVFCGSSSGKKPTYQSAAIELGQELVERRIDLVYGGGSVGLMGLVSQAVHDGGRHVLGIIPRTLMPVEVGLLNVDGYYNSLLSFIDKAVDEGFVSPTARRIIVSAPTAKALVRQLEEYVPEYDEITSQLVWEDVDRRSYVAESEIAT

Homology

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BLAST of HG10020068 vs. NCBI nr
Match: XP_038903675.1 (cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG7 isoform X1 [Benincasa hispida])

HSP 1 Score: 283.1 bits (723), Expect = 1.5e-72
Identity = 155/215 (72.09%), Postives = 158/215 (73.49%), Query Frame = 0


Query: 1   MEDTKSRFKRICVFCGSSSGKKPTYQSAAIELGQELVERRIDLVYGGGSVGLMGLVSQAV 60
           MEDT+SRFKRICVFCGSSSGKKP+YQSAAIELGQELVERRIDLVYGGGSVGLMGLVSQAV
Sbjct: 1   MEDTRSRFKRICVFCGSSSGKKPSYQSAAIELGQELVERRIDLVYGGGSVGLMGLVSQAV 60

Query: 61  HDGGRHVLGIIPRTLMPVE----------------------------------------- 120
           HDGGRHVLGIIPRTLMPVE                                         
Sbjct: 61  HDGGRHVLGIIPRTLMPVEITGETVGEVKPVSDMHQRKAEMARQADAFIALPGGYGTLEE 120

Query: 121 ----------------VGLLNVDGYYNSLLSFIDKAVDEGFVSPTARRIIVSAPTAKALV 159
                           VGLLNVDGYYNSLLSFIDKAVDEGFVSPTARRIIVSAPTAKALV
Sbjct: 121 LLEVITWAQLGIHRKPVGLLNVDGYYNSLLSFIDKAVDEGFVSPTARRIIVSAPTAKALV 180

[Close]

BLAST of HG10020068 vs. NCBI nr
Match: XP_004136507.1 (cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG7 [Cucumis sativus])

HSP 1 Score: 279.6 bits (714), Expect = 1.6e-71
Identity = 154/215 (71.63%), Postives = 157/215 (73.02%), Query Frame = 0


Query: 1   MEDTKSRFKRICVFCGSSSGKKPTYQSAAIELGQELVERRIDLVYGGGSVGLMGLVSQAV 60
           ME+TKSRFKRICVFCGSSSGKKP+YQSAAIELGQELVERRIDLVYGGGSVGLMGLVSQAV
Sbjct: 1   MEETKSRFKRICVFCGSSSGKKPSYQSAAIELGQELVERRIDLVYGGGSVGLMGLVSQAV 60

Query: 61  HDGGRHVLGIIPRTLMPVE----------------------------------------- 120
           HDGGRHVLGIIPRTLMPVE                                         
Sbjct: 61  HDGGRHVLGIIPRTLMPVEITGETVGEVKPVSDMHQRKAEMTRQADAFIALPGGYGTLEE 120

Query: 121 ----------------VGLLNVDGYYNSLLSFIDKAVDEGFVSPTARRIIVSAPTAKALV 159
                           VGLLNVDGYYNSLL FIDKAVDEGFVSPTARRIIVSAPTAKALV
Sbjct: 121 LLEVITWAQLGIHRKPVGLLNVDGYYNSLLCFIDKAVDEGFVSPTARRIIVSAPTAKALV 180

[Close]

BLAST of HG10020068 vs. NCBI nr
Match: XP_022983101.1 (cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG7 isoform X1 [Cucurbita maxima] >XP_023528160.1 cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG7 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 275.8 bits (704), Expect = 2.3e-70
Identity = 152/215 (70.70%), Postives = 155/215 (72.09%), Query Frame = 0


Query: 1   MEDTKSRFKRICVFCGSSSGKKPTYQSAAIELGQELVERRIDLVYGGGSVGLMGLVSQAV 60
           ME T+SRFKRICVFCGSSSGKKPTYQSAA+ELGQELVER IDLVYGGGSVGLMGLVSQAV
Sbjct: 1   MEGTQSRFKRICVFCGSSSGKKPTYQSAAVELGQELVERSIDLVYGGGSVGLMGLVSQAV 60

Query: 61  HDGGRHVLGIIPRTLMPVE----------------------------------------- 120
           HDGGRHVLG+IPRTLM VE                                         
Sbjct: 61  HDGGRHVLGVIPRTLMTVEITGESVGEVKPVSDMHQRKAEMARQADAFIALPGGYGTLEE 120

Query: 121 ----------------VGLLNVDGYYNSLLSFIDKAVDEGFVSPTARRIIVSAPTAKALV 159
                           VGLLNVDGYYNSLLSFIDKAVDEGFVSPTARRIIVSAPTAKALV
Sbjct: 121 LLEVITWAQLGIHRKPVGLLNVDGYYNSLLSFIDKAVDEGFVSPTARRIIVSAPTAKALV 180

[Close]

BLAST of HG10020068 vs. NCBI nr
Match: XP_022144579.1 (cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG7 [Momordica charantia])

HSP 1 Score: 275.4 bits (703), Expect = 3.1e-70
Identity = 151/215 (70.23%), Postives = 155/215 (72.09%), Query Frame = 0


Query: 1   MEDTKSRFKRICVFCGSSSGKKPTYQSAAIELGQELVERRIDLVYGGGSVGLMGLVSQAV 60
           ME+TKSRFKRICVFCGSSSGKK +YQSAA+ELGQELVERRIDLVYGGGSVGLMGLVSQAV
Sbjct: 1   MEETKSRFKRICVFCGSSSGKKASYQSAAVELGQELVERRIDLVYGGGSVGLMGLVSQAV 60

Query: 61  HDGGRHVLGIIPRTLMPVE----------------------------------------- 120
           HDGGRHVLG+IPRTLMPVE                                         
Sbjct: 61  HDGGRHVLGVIPRTLMPVEITGETVGEVKPVSDMHQRKAEMARQADAFIALPGGYGTLEE 120

Query: 121 ----------------VGLLNVDGYYNSLLSFIDKAVDEGFVSPTARRIIVSAPTAKALV 159
                           VGLLNVDGYYNSLL FIDKAVDEGFVSPTARRIIVSAPTAK LV
Sbjct: 121 LLEVITWAQLGIHRKPVGLLNVDGYYNSLLCFIDKAVDEGFVSPTARRIIVSAPTAKLLV 180

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BLAST of HG10020068 vs. NCBI nr
Match: XP_022934751.1 (cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG7 [Cucurbita moschata])

HSP 1 Score: 274.6 bits (701), Expect = 5.2e-70
Identity = 151/215 (70.23%), Postives = 155/215 (72.09%), Query Frame = 0


Query: 1   MEDTKSRFKRICVFCGSSSGKKPTYQSAAIELGQELVERRIDLVYGGGSVGLMGLVSQAV 60
           ME T+SRFKRICVFCGSSSGKKPTYQSAA+ELGQELVER IDLVYGGGSVGLMGLVSQAV
Sbjct: 1   MEGTQSRFKRICVFCGSSSGKKPTYQSAAVELGQELVERSIDLVYGGGSVGLMGLVSQAV 60

Query: 61  HDGGRHVLGIIPRTLMPVE----------------------------------------- 120
           HDGGRHVLG+IPRTLM VE                                         
Sbjct: 61  HDGGRHVLGVIPRTLMTVEITGESVGEVKPVSDMHQRKAEMARQADAFIALPGGYGTLEE 120

Query: 121 ----------------VGLLNVDGYYNSLLSFIDKAVDEGFVSPTARRIIVSAPTAKALV 159
                           VGLLNVDGYYNSLL+FIDKAVDEGFVSPTARRIIVSAPTAKALV
Sbjct: 121 LLEVITWAQLGIHRKPVGLLNVDGYYNSLLNFIDKAVDEGFVSPTARRIIVSAPTAKALV 180

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BLAST of HG10020068 vs. ExPASy Swiss-Prot
Match: Q8GW29 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG7 OS=Arabidopsis thaliana OX=3702 GN=LOG7 PE=1 SV=2)

HSP 1 Score: 247.7 bits (631), Expect = 9.0e-65
Identity = 135/215 (62.79%), Postives = 147/215 (68.37%), Query Frame = 0


Query: 1   MEDTKSRFKRICVFCGSSSGKKPTYQSAAIELGQELVERRIDLVYGGGSVGLMGLVSQAV 60
           ME+TKSRFKRICVFCGSSSGKKP+YQ AAI+LG ELVERRIDLVYGGGSVGLMGLVSQAV
Sbjct: 1   MEETKSRFKRICVFCGSSSGKKPSYQEAAIQLGNELVERRIDLVYGGGSVGLMGLVSQAV 60

Query: 61  HDGGRHVLGIIPRTLMPVE----------------------------------------- 120
           H GGRHVLG+IP+TLMP E                                         
Sbjct: 61  HHGGRHVLGVIPKTLMPREITGETIGEVKAVADMHQRKAEMARQADAFIALPGGYGTLEE 120

Query: 121 ----------------VGLLNVDGYYNSLLSFIDKAVDEGFVSPTARRIIVSAPTAKALV 159
                           VGLLNVDGYYNSLL+FIDKAVDEGF+SP ARRIIVSAP AK LV
Sbjct: 121 LLEVITWAQLGIHRKPVGLLNVDGYYNSLLTFIDKAVDEGFISPMARRIIVSAPNAKELV 180

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BLAST of HG10020068 vs. ExPASy Swiss-Prot
Match: Q8L8B8 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3 OS=Arabidopsis thaliana OX=3702 GN=LOG3 PE=1 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 1.5e-51
Identity = 111/206 (53.88%), Postives = 131/206 (63.59%), Query Frame = 0


Query: 5   KSRFKRICVFCGSSSGKKPTYQSAAIELGQELVERRIDLVYGGGSVGLMGLVSQAVHDGG 64
           KS+F+RICVFCGSS GKK +YQ AA++LG ELV R IDLVYGGGS+GLMGLVSQAVHDGG
Sbjct: 10  KSKFRRICVFCGSSQGKKSSYQDAAVDLGNELVSRNIDLVYGGGSIGLMGLVSQAVHDGG 69

Query: 65  RHVLGIIPRTLMPVE--------------------------------------------- 124
           RHV+GIIP+TLMP E                                             
Sbjct: 70  RHVIGIIPKTLMPRELTGETVGEVRAVADMHQRKAEMAKHSDAFIALPGGYGTLEELLEV 129

Query: 125 ------------VGLLNVDGYYNSLLSFIDKAVDEGFVSPTARRIIVSAPTAKALVRQLE 154
                       VGLLNVDGYYNSLLSFIDKAV+EGF+SPTAR IIVSAPTAK LV++LE
Sbjct: 130 ITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVEEGFISPTAREIIVSAPTAKELVKKLE 189

[Close]

BLAST of HG10020068 vs. ExPASy Swiss-Prot
Match: Q5BPS0 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG2 OS=Arabidopsis thaliana OX=3702 GN=LOG2 PE=1 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 2.8e-50
Identity = 108/201 (53.73%), Postives = 128/201 (63.68%), Query Frame = 0


Query: 1   MEDTKSRFKRICVFCGSSSGKKPTYQSAAIELGQELVERRIDLVYGGGSVGLMGLVSQAV 60
           ME+TKSRF+RICVFCGSSSG K TY  AA++L  +LVER IDLVYGGGSVGLMGL+SQAV
Sbjct: 1   MEETKSRFRRICVFCGSSSGNKTTYHDAALQLAHQLVERNIDLVYGGGSVGLMGLISQAV 60

Query: 61  HDGGRHVLGIIPRTLMPVE----------------------------------------- 120
           HDGGRHVLGIIP++L P E                                         
Sbjct: 61  HDGGRHVLGIIPKSLAPREITGESIGEVITVSTMHQRKAEMGRQADAFIALPGGYGTFEE 120

Query: 121 ----------------VGLLNVDGYYNSLLSFIDKAVDEGFVSPTARRIIVSAPTAKALV 145
                           VGLLNVDG+Y+SLL+FIDKAVDEGFVS TARRIIVSAP A  L+
Sbjct: 121 LLEVITWSQLGIHTKPVGLLNVDGFYDSLLTFIDKAVDEGFVSSTARRIIVSAPNAPQLL 180

[Close]

BLAST of HG10020068 vs. ExPASy Swiss-Prot
Match: Q9LFH3 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG4 OS=Arabidopsis thaliana OX=3702 GN=LOG4 PE=1 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 4.0e-49
Identity = 107/206 (51.94%), Postives = 129/206 (62.62%), Query Frame = 0


Query: 5   KSRFKRICVFCGSSSGKKPTYQSAAIELGQELVERRIDLVYGGGSVGLMGLVSQAVHDGG 64
           KS+F RICVFCGSS GKK +YQ AA++LG ELV R IDLVYGGGS+GLMGLVSQAVHDGG
Sbjct: 10  KSKFGRICVFCGSSQGKKSSYQDAAVDLGNELVLRNIDLVYGGGSIGLMGLVSQAVHDGG 69

Query: 65  RHVLGIIPRTLMPVE--------------------------------------------- 124
           RHV+G+IP+TLMP E                                             
Sbjct: 70  RHVIGVIPKTLMPRELTGETVGEVRAVADMHQRKAEMARHSDAFIALPGGYGTLEELLEV 129

Query: 125 ------------VGLLNVDGYYNSLLSFIDKAVDEGFVSPTARRIIVSAPTAKALVRQLE 154
                       VGLLNVDGYYNSLLSFIDKAV+EGF+S  AR+II+SAPTAK LV++LE
Sbjct: 130 ITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVEEGFISTNARQIIISAPTAKELVKKLE 189

[Close]

BLAST of HG10020068 vs. ExPASy Swiss-Prot
Match: B9F166 (Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL2 OS=Oryza sativa subsp. japonica OX=39947 GN=LOGL2 PE=3 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 4.5e-48
Identity = 105/209 (50.24%), Postives = 129/209 (61.72%), Query Frame = 0


Query: 5   KSRFKRICVFCGSSSGKKPTYQSAAIELGQELVERRIDLVYGGGSVGLMGLVSQAVHDGG 64
           +SRF+R+CVFCGSS GKK  YQ AAIELG+ELV R IDLVYGGGSVGLMGLVSQAVH+GG
Sbjct: 17  QSRFRRVCVFCGSSHGKKKIYQDAAIELGKELVARNIDLVYGGGSVGLMGLVSQAVHNGG 76

Query: 65  RHVLGIIPRTLMPVE--------------------------------------------- 124
           RHV+G+IP+TLMP E                                             
Sbjct: 77  RHVIGVIPKTLMPREISGETVGEVKAVSDMHQRKAEMARQSDAFIALPGGYGTLEELLEV 136

Query: 125 ------------VGLLNVDGYYNSLLSFIDKAVDEGFVSPTARRIIVSAPTAKALVRQLE 157
                       VGLLNVDGYYN LLSFIDKAV+EGF+ P+AR IIV APT K L+ +LE
Sbjct: 137 IAWAQLGIHDKPVGLLNVDGYYNPLLSFIDKAVEEGFIRPSARHIIVLAPTPKELIEKLE 196

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BLAST of HG10020068 vs. ExPASy TrEMBL
Match: A0A0A0LEQ3 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucumis sativus OX=3659 GN=Csa_3G778430 PE=3 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 7.9e-72
Identity = 154/215 (71.63%), Postives = 157/215 (73.02%), Query Frame = 0


Query: 1   MEDTKSRFKRICVFCGSSSGKKPTYQSAAIELGQELVERRIDLVYGGGSVGLMGLVSQAV 60
           ME+TKSRFKRICVFCGSSSGKKP+YQSAAIELGQELVERRIDLVYGGGSVGLMGLVSQAV
Sbjct: 1   MEETKSRFKRICVFCGSSSGKKPSYQSAAIELGQELVERRIDLVYGGGSVGLMGLVSQAV 60

Query: 61  HDGGRHVLGIIPRTLMPVE----------------------------------------- 120
           HDGGRHVLGIIPRTLMPVE                                         
Sbjct: 61  HDGGRHVLGIIPRTLMPVEITGETVGEVKPVSDMHQRKAEMTRQADAFIALPGGYGTLEE 120

Query: 121 ----------------VGLLNVDGYYNSLLSFIDKAVDEGFVSPTARRIIVSAPTAKALV 159
                           VGLLNVDGYYNSLL FIDKAVDEGFVSPTARRIIVSAPTAKALV
Sbjct: 121 LLEVITWAQLGIHRKPVGLLNVDGYYNSLLCFIDKAVDEGFVSPTARRIIVSAPTAKALV 180

[Close]

BLAST of HG10020068 vs. ExPASy TrEMBL
Match: A0A6J1J161 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucurbita maxima OX=3661 GN=LOC111481749 PE=3 SV=1)

HSP 1 Score: 275.8 bits (704), Expect = 1.1e-70
Identity = 152/215 (70.70%), Postives = 155/215 (72.09%), Query Frame = 0


Query: 1   MEDTKSRFKRICVFCGSSSGKKPTYQSAAIELGQELVERRIDLVYGGGSVGLMGLVSQAV 60
           ME T+SRFKRICVFCGSSSGKKPTYQSAA+ELGQELVER IDLVYGGGSVGLMGLVSQAV
Sbjct: 1   MEGTQSRFKRICVFCGSSSGKKPTYQSAAVELGQELVERSIDLVYGGGSVGLMGLVSQAV 60

Query: 61  HDGGRHVLGIIPRTLMPVE----------------------------------------- 120
           HDGGRHVLG+IPRTLM VE                                         
Sbjct: 61  HDGGRHVLGVIPRTLMTVEITGESVGEVKPVSDMHQRKAEMARQADAFIALPGGYGTLEE 120

Query: 121 ----------------VGLLNVDGYYNSLLSFIDKAVDEGFVSPTARRIIVSAPTAKALV 159
                           VGLLNVDGYYNSLLSFIDKAVDEGFVSPTARRIIVSAPTAKALV
Sbjct: 121 LLEVITWAQLGIHRKPVGLLNVDGYYNSLLSFIDKAVDEGFVSPTARRIIVSAPTAKALV 180

[Close]

BLAST of HG10020068 vs. ExPASy TrEMBL
Match: A0A6J1CSQ5 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Momordica charantia OX=3673 GN=LOC111014230 PE=3 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 1.5e-70
Identity = 151/215 (70.23%), Postives = 155/215 (72.09%), Query Frame = 0


Query: 1   MEDTKSRFKRICVFCGSSSGKKPTYQSAAIELGQELVERRIDLVYGGGSVGLMGLVSQAV 60
           ME+TKSRFKRICVFCGSSSGKK +YQSAA+ELGQELVERRIDLVYGGGSVGLMGLVSQAV
Sbjct: 1   MEETKSRFKRICVFCGSSSGKKASYQSAAVELGQELVERRIDLVYGGGSVGLMGLVSQAV 60

Query: 61  HDGGRHVLGIIPRTLMPVE----------------------------------------- 120
           HDGGRHVLG+IPRTLMPVE                                         
Sbjct: 61  HDGGRHVLGVIPRTLMPVEITGETVGEVKPVSDMHQRKAEMARQADAFIALPGGYGTLEE 120

Query: 121 ----------------VGLLNVDGYYNSLLSFIDKAVDEGFVSPTARRIIVSAPTAKALV 159
                           VGLLNVDGYYNSLL FIDKAVDEGFVSPTARRIIVSAPTAK LV
Sbjct: 121 LLEVITWAQLGIHRKPVGLLNVDGYYNSLLCFIDKAVDEGFVSPTARRIIVSAPTAKLLV 180

[Close]

BLAST of HG10020068 vs. ExPASy TrEMBL
Match: A0A6J1F2P8 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucurbita moschata OX=3662 GN=LOC111441836 PE=3 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 2.5e-70
Identity = 151/215 (70.23%), Postives = 155/215 (72.09%), Query Frame = 0


Query: 1   MEDTKSRFKRICVFCGSSSGKKPTYQSAAIELGQELVERRIDLVYGGGSVGLMGLVSQAV 60
           ME T+SRFKRICVFCGSSSGKKPTYQSAA+ELGQELVER IDLVYGGGSVGLMGLVSQAV
Sbjct: 1   MEGTQSRFKRICVFCGSSSGKKPTYQSAAVELGQELVERSIDLVYGGGSVGLMGLVSQAV 60

Query: 61  HDGGRHVLGIIPRTLMPVE----------------------------------------- 120
           HDGGRHVLG+IPRTLM VE                                         
Sbjct: 61  HDGGRHVLGVIPRTLMTVEITGESVGEVKPVSDMHQRKAEMARQADAFIALPGGYGTLEE 120

Query: 121 ----------------VGLLNVDGYYNSLLSFIDKAVDEGFVSPTARRIIVSAPTAKALV 159
                           VGLLNVDGYYNSLL+FIDKAVDEGFVSPTARRIIVSAPTAKALV
Sbjct: 121 LLEVITWAQLGIHRKPVGLLNVDGYYNSLLNFIDKAVDEGFVSPTARRIIVSAPTAKALV 180

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BLAST of HG10020068 vs. ExPASy TrEMBL
Match: A0A6J1FQZ0 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucurbita moschata OX=3662 GN=LOC111446119 PE=3 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 2.6e-67
Identity = 145/215 (67.44%), Postives = 152/215 (70.70%), Query Frame = 0


Query: 1   MEDTKSRFKRICVFCGSSSGKKPTYQSAAIELGQELVERRIDLVYGGGSVGLMGLVSQAV 60
           ME+TKS+FKRICVFCGSSSG KPTYQSAA+EL +ELVERRIDLVYGGGSVGLMGLVS+AV
Sbjct: 1   MEETKSKFKRICVFCGSSSGNKPTYQSAAVELAKELVERRIDLVYGGGSVGLMGLVSRAV 60

Query: 61  HDGGRHVLGIIPRTLMPVE----------------------------------------- 120
           HDGGRHVLGIIPRTLMPVE                                         
Sbjct: 61  HDGGRHVLGIIPRTLMPVEITGGTVGEVKPVSDMHQRKAEMARQADAFIALPGGYGTLEE 120

Query: 121 ----------------VGLLNVDGYYNSLLSFIDKAVDEGFVSPTARRIIVSAPTAKALV 159
                           VGLLNVDGYYNSLLSFIDK VDEGFVSPTARRIIVSAPTAK LV
Sbjct: 121 LLEVITWAQLGIHRKPVGLLNVDGYYNSLLSFIDKTVDEGFVSPTARRIIVSAPTAKLLV 180

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BLAST of HG10020068 vs. TAIR 10
Match: AT5G06300.1 (Putative lysine decarboxylase family protein )

HSP 1 Score: 247.7 bits (631), Expect = 6.4e-66
Identity = 135/215 (62.79%), Postives = 147/215 (68.37%), Query Frame = 0


Query: 1   MEDTKSRFKRICVFCGSSSGKKPTYQSAAIELGQELVERRIDLVYGGGSVGLMGLVSQAV 60
           ME+TKSRFKRICVFCGSSSGKKP+YQ AAI+LG ELVERRIDLVYGGGSVGLMGLVSQAV
Sbjct: 1   MEETKSRFKRICVFCGSSSGKKPSYQEAAIQLGNELVERRIDLVYGGGSVGLMGLVSQAV 60

Query: 61  HDGGRHVLGIIPRTLMPVE----------------------------------------- 120
           H GGRHVLG+IP+TLMP E                                         
Sbjct: 61  HHGGRHVLGVIPKTLMPREITGETIGEVKAVADMHQRKAEMARQADAFIALPGGYGTLEE 120

Query: 121 ----------------VGLLNVDGYYNSLLSFIDKAVDEGFVSPTARRIIVSAPTAKALV 159
                           VGLLNVDGYYNSLL+FIDKAVDEGF+SP ARRIIVSAP AK LV
Sbjct: 121 LLEVITWAQLGIHRKPVGLLNVDGYYNSLLTFIDKAVDEGFISPMARRIIVSAPNAKELV 180

[Close]

BLAST of HG10020068 vs. TAIR 10
Match: AT2G37210.1 (lysine decarboxylase family protein )

HSP 1 Score: 203.8 bits (517), Expect = 1.1e-52
Identity = 111/206 (53.88%), Postives = 131/206 (63.59%), Query Frame = 0


Query: 5   KSRFKRICVFCGSSSGKKPTYQSAAIELGQELVERRIDLVYGGGSVGLMGLVSQAVHDGG 64
           KS+F+RICVFCGSS GKK +YQ AA++LG ELV R IDLVYGGGS+GLMGLVSQAVHDGG
Sbjct: 10  KSKFRRICVFCGSSQGKKSSYQDAAVDLGNELVSRNIDLVYGGGSIGLMGLVSQAVHDGG 69

Query: 65  RHVLGIIPRTLMPVE--------------------------------------------- 124
           RHV+GIIP+TLMP E                                             
Sbjct: 70  RHVIGIIPKTLMPRELTGETVGEVRAVADMHQRKAEMAKHSDAFIALPGGYGTLEELLEV 129

Query: 125 ------------VGLLNVDGYYNSLLSFIDKAVDEGFVSPTARRIIVSAPTAKALVRQLE 154
                       VGLLNVDGYYNSLLSFIDKAV+EGF+SPTAR IIVSAPTAK LV++LE
Sbjct: 130 ITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVEEGFISPTAREIIVSAPTAKELVKKLE 189

[Close]

BLAST of HG10020068 vs. TAIR 10
Match: AT2G35990.1 (Putative lysine decarboxylase family protein )

HSP 1 Score: 199.5 bits (506), Expect = 2.0e-51
Identity = 108/201 (53.73%), Postives = 128/201 (63.68%), Query Frame = 0


Query: 1   MEDTKSRFKRICVFCGSSSGKKPTYQSAAIELGQELVERRIDLVYGGGSVGLMGLVSQAV 60
           ME+TKSRF+RICVFCGSSSG K TY  AA++L  +LVER IDLVYGGGSVGLMGL+SQAV
Sbjct: 1   MEETKSRFRRICVFCGSSSGNKTTYHDAALQLAHQLVERNIDLVYGGGSVGLMGLISQAV 60

Query: 61  HDGGRHVLGIIPRTLMPVE----------------------------------------- 120
           HDGGRHVLGIIP++L P E                                         
Sbjct: 61  HDGGRHVLGIIPKSLAPREITGESIGEVITVSTMHQRKAEMGRQADAFIALPGGYGTFEE 120

Query: 121 ----------------VGLLNVDGYYNSLLSFIDKAVDEGFVSPTARRIIVSAPTAKALV 145
                           VGLLNVDG+Y+SLL+FIDKAVDEGFVS TARRIIVSAP A  L+
Sbjct: 121 LLEVITWSQLGIHTKPVGLLNVDGFYDSLLTFIDKAVDEGFVSSTARRIIVSAPNAPQLL 180

[Close]

BLAST of HG10020068 vs. TAIR 10
Match: AT3G53450.1 (Putative lysine decarboxylase family protein )

HSP 1 Score: 195.7 bits (496), Expect = 2.9e-50
Identity = 107/206 (51.94%), Postives = 129/206 (62.62%), Query Frame = 0


Query: 5   KSRFKRICVFCGSSSGKKPTYQSAAIELGQELVERRIDLVYGGGSVGLMGLVSQAVHDGG 64
           KS+F RICVFCGSS GKK +YQ AA++LG ELV R IDLVYGGGS+GLMGLVSQAVHDGG
Sbjct: 10  KSKFGRICVFCGSSQGKKSSYQDAAVDLGNELVLRNIDLVYGGGSIGLMGLVSQAVHDGG 69

Query: 65  RHVLGIIPRTLMPVE--------------------------------------------- 124
           RHV+G+IP+TLMP E                                             
Sbjct: 70  RHVIGVIPKTLMPRELTGETVGEVRAVADMHQRKAEMARHSDAFIALPGGYGTLEELLEV 129

Query: 125 ------------VGLLNVDGYYNSLLSFIDKAVDEGFVSPTARRIIVSAPTAKALVRQLE 154
                       VGLLNVDGYYNSLLSFIDKAV+EGF+S  AR+II+SAPTAK LV++LE
Sbjct: 130 ITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVEEGFISTNARQIIISAPTAKELVKKLE 189

[Close]

BLAST of HG10020068 vs. TAIR 10
Match: AT2G37210.2 (lysine decarboxylase family protein )

HSP 1 Score: 194.5 bits (493), Expect = 6.4e-50
Identity = 111/230 (48.26%), Postives = 131/230 (56.96%), Query Frame = 0


Query: 5   KSRFKRICVFCGSSSGKKPTYQSAAIELGQELVERRIDLVYGGGSVGLMGLVSQAVHDGG 64
           KS+F+RICVFCGSS GKK +YQ AA++LG ELV R IDLVYGGGS+GLMGLVSQAVHDGG
Sbjct: 10  KSKFRRICVFCGSSQGKKSSYQDAAVDLGNELVSRNIDLVYGGGSIGLMGLVSQAVHDGG 69

Query: 65  RHVLGIIPRTLMPVE--------------------------------------------- 124
           RHV+GIIP+TLMP E                                             
Sbjct: 70  RHVIGIIPKTLMPRELTGETVGEVRAVADMHQRKAEMAKHSDAFIALPEENNLVKLKNML 129

Query: 125 ------------------------------------VGLLNVDGYYNSLLSFIDKAVDEG 154
                                               VGLLNVDGYYNSLLSFIDKAV+EG
Sbjct: 130 SWSSCSVKATLKSGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVEEG 189

The following BLAST results are available for this feature:

BLAST of HG10020068 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038903675.1	1.5e-72	72.09	cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG7 isoform X1 [Beninc...	[more]
XP_004136507.1	1.6e-71	71.63	cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG7 [Cucumis sativus]	[more]
XP_022983101.1	2.3e-70	70.70	cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG7 isoform X1 [Cucurb...	[more]
XP_022144579.1	3.1e-70	70.23	cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG7 [Momordica charant...	[more]
XP_022934751.1	5.2e-70	70.23	cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG7 [Cucurbita moschat...	[more]

BLAST of HG10020068 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GW29	9.0e-65	62.79	Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG7 OS=Arabidopsis tha...	[more]
Q8L8B8	1.5e-51	53.88	Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3 OS=Arabidopsis tha...	[more]
Q5BPS0	2.8e-50	53.73	Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG2 OS=Arabidopsis tha...	[more]
Q9LFH3	4.0e-49	51.94	Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG4 OS=Arabidopsis tha...	[more]
B9F166	4.5e-48	50.24	Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL2 OS=Oryza...	[more]

BLAST of HG10020068 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LEQ3	7.9e-72	71.63	Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucumis sativus OX=3...	[more]
A0A6J1J161	1.1e-70	70.70	Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucurbita maxima OX=...	[more]
A0A6J1CSQ5	1.5e-70	70.23	Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Momordica charantia ...	[more]
A0A6J1F2P8	2.5e-70	70.23	Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucurbita moschata O...	[more]
A0A6J1FQZ0	2.6e-67	67.44	Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucurbita moschata O...	[more]

BLAST of HG10020068 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G06300.1	6.4e-66	62.79	Putative lysine decarboxylase family protein	[more]
AT2G37210.1	1.1e-52	53.88	lysine decarboxylase family protein	[more]
AT2G35990.1	2.0e-51	53.73	Putative lysine decarboxylase family protein	[more]
AT3G53450.1	2.9e-50	51.94	Putative lysine decarboxylase family protein	[more]
AT2G37210.2	6.4e-50	48.26	lysine decarboxylase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.50.450		coord: 1..79 e-value: 3.6E-30 score: 107.0
None	No IPR available	GENE3D	3.40.50.450		coord: 80..145 e-value: 4.5E-16 score: 61.0
None	No IPR available	PANTHER	PTHR31223:SF72	CYTOKININ RIBOSIDE 5'-MONOPHOSPHATE PHOSPHORIBOHYDROLASE LOG7	coord: 4..80 coord: 80..156
None	No IPR available	PANTHER	PTHR31223	LOG FAMILY PROTEIN YJL055W	coord: 4..80 coord: 80..156
None	No IPR available	SUPERFAMILY	102405	MCP/YpsA-like	coord: 7..129
IPR041164	SLOG cluster4	PFAM	PF18306	LDcluster4	coord: 15..73 e-value: 9.1E-8 score: 31.7
IPR031100	LOG family	PFAM	PF03641	Lysine_decarbox	coord: 78..126 e-value: 5.7E-9 score: 36.2

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10020068.1	HG10020068.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009691	cytokinin biosynthetic process
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005634	nucleus
molecular_function	GO:0016799	hydrolase activity, hydrolyzing N-glycosyl compounds