HG10020062 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10020062
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	NDR1/HIN1-Like protein 3-like
Location	Chr04: 28446492 .. 28449902 (+)
RNA-Seq Expression	HG10020062
Synteny	HG10020062

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCAAGAACAAAGAAGTGCATCATATTCACCATTATCATTATAGTTTTAATTCTCATTTCCTTGTTCATCTTATGGCTCATCACCATGACCAATAAAGTCAAATTCCAAGTGACCAACGCCAACCTGACCCAATTCAACTTCACCGACGACAGCCAACTCCTCTTCCAACTCAGCCTTAACATGACTGTCAAAAACCCTAATCGCGGCTTTGAAGTTTTCTTTGACAGCATCAAAGTGGTTGTGTTGTATCAAGACATTAAGTTTAGCAACGTATCGCTGTCGCCATTTTACCAAGGCCAAGAGGGAAGAAGCTTGCTGAATTTAAGGTTTGATGGTCAGCAATTGATGAATCTTGACGCTGAGCAGCTGGCTGTGTTCACTCTTGAGAAACTTGTTGATATCTTCTCTATTAAAGTGGAGCTTCTTCTTCATATGAGGGTTCAGATTGGTCTCATTAGGATCAAACTCAATCCCAAGGTTCGTTGTGGCCTTAATCTTCCCTTGATTTCTCATGGAAGATCGTTTTTTCGCTTTCGGATTATTGGATGCTATGTCGCTTATTGATTGATTCTCTACTCTTCTTTTTTGAAGAGGCGATCATAATGGAAGTGACAGTTTTGCATCATTAATTACAACATTCAACTATTATTAGTATTTTATTTTTACATTTATATTCTTGATAAAATACAATCGTGAAGGTGAGATTAGAATTGATTTCGATGAAGAAAGATACATATTTTGAACTATGTGATTTTAGACATTTGATATGGAGTTCAATTCATATTGTAAGGTTTTTATTAAATAATTGAAATAAACTATTATAAGGCTTGTTGGCTTAAATGGTTTTTTCAAGGTTGAGAAATTTCTATTTACTTCTTAAACAGTGTTATCACTTCTTCAAACAAAAATTTTTATATATGTCTAATTTTTGTTATTTAGAACTCAAGTGTGCACCTTTTAATCTATTTTATACTTATATTTGTAGTAGGCTAAATATTTTATTATTTTTTTTATCTATTATTTTACTTACTAGTTTACACATTTGCTTTAAATGCTAATGACGTGATTAAATAATATATTGTATGTTTACTATATGTGTTGGGTATCGAAATGAACCTCTCAATCTTTTCATAAATTTTTTAATAATATATATTAATATCAAATATCTAAATTAAATACTAAGATTAATCGTGTTTGTCACATAGTTTTGTTTTTTAGGGTTTTAGAATATGTTATTTGAAATTAAGGAAAACTTGTTTGAGAAGTAACAATGTTTTTAACACAATTCCTTTTGGTTATATAAAAAGTTTTTAAAATAAAATTTTCATTATTAAACATATTTTCTTGGTTAGAATACAAAATATAATAAGACAATTTGACCTAGGACTCTAATTCTTTGAAAGTAAACTTGATTTTATTTTGTGCTATGTCTATCTTTTTGCTGTGCATTCCAATTACACAAGAGAAAAAATTCAAAAATATATTTAAGAAAATAAATAAAAATAAGAGTTTGTCACATGATAAATGGTGGTTGAACTATTGGGTGTAATTGATACACAGAAGTATTTTTCATTTTTTTAGGAAATTGTATATATTTCTAACTCATTTTTCTCTAGAATCTAGTTATTCATGAAATATTCTTTTTTTAATAAAATAACTACGACAACGAGGAATCAAACCTCTAACCTCTCGAGACTAAAAAATTTTAATAGAGTACATATGATTTTAGTCCTTTAAGTTTTTCAAATATCAACGTTAACTCCTTAGTTTCAACATGTTTTAAAATAGTATGACAACGAATTGATTTTGCATTATTTTAGTAGAAAAAATATGTTTAAAATTAAATGTTTAATCTCCGTGAATTACAAACAACGGTAGGTGATACACGTGATGGAGTCATAGAGGTAGTTGGCGATTTTGACTAGTTAAAAAGTAAAATATATAATTATAAAAAAAGAAATTATAAAATTAATATATAACTATAACTATACTAATTATTCTCCAAAACGAATCTGACTCAATTGTCATATAAATGTGTTAGCAATTAAGAAACGTGTAGTTTGAATTTTTCTTATTAGAAAAAGAAAAGCATACTAATCATCGATATACATTATAATAAAATTTGTCTGAGTAAAAGAATAAATAAACAGGTAATTCCTCCTTTTGAGTAAAGTTTTTAGAACAAAAATCAAGATGTTGAGTTAAAGTTTTTTTGCTTAATTTTTTATTTGCAAAAGCAATGGACATTTATTTAGATTTTAAAATATGTAATATACAAATCTATAAAATTTTAAAACTGATTGGGTGTTTTTTTTAGTTTTGTGATATATTTCTATGAGTAATTTTGTGTTTTAAATATTTTGGATTATGGAAATAAATAAATGGTCATAATCGGGTAGTTGCTTCTGAGATGACGCCGATTATAAATTAATCACTAATTAAATAGTTGGGCTGTACCTTGAGCAATAACAAAAGACTTCAATTATTTAATACCTTTAATAACATATTTTACAATATTAAAAAACATATTTTACAAATAACAAAAAAATTGGTTGTACATGGATGAATAATAATAATAATAATAATAATAATAATAAAGACGTCAAAAATGAAACTTTTCAGTACTTTACATAAATTGATTTACAAATAAAAACTTGATCGTACATGGGGAATAGAAAAAGACTTCAAAAACTAAAGGGGCAAATTGCAAAAAAACACTTTTAAAGTAGAGTGGTATTTGCATTTATACTTACAAACTTGTAATGGTAAAAATTGAGTTTTTAAACTTATGTAAGTATTAAAATTGGATTCTAAAACTTACATCATTATAGAAATTGTAACAATTGTATAAGTTTGAGAATTTAATTTTTATTATTTAGGAGTTCAATTTCTATAATTATTATAAGTTTGAAGGTCCAATTTTAACACTTGTAGAAGTTTAAGAGCCCAAGTTTTACAATTAAAAGTTTGAGAGTGTAATTGTAACTACCACCGTACTTCAGGAGTACTGGTTTTGCAATTTACCCAAACTAAATTTTGTAAGAAATTTTGCAAGAACTTGACTATTGATAATTATTAAAATAAATATCTATATTAAGACACTAACCAAAATAAAAAATGCAGAAACAATTGCAAGGAATCCATATAAAAGAGCTACAAAATAAAGTATATGGTTTATATATGTGATGTGATTAATCTACTTTGTTGGATGAGAAATTTTAGCTAATCACAAGTTGTCACACGTCATCATAAACTAAAGTTTATTTTATTGAATGTATGACAAATTACAAATTATTGTCTCTAAATGAAAATTTGGAGACAAATAAATGACAAACTAAAAAATGTTACGTGTCTCTTTCCTAGCCATTTGATCACAACGATGGACTTATCAAATCCAACGGTGATTAA

mRNA sequence

ATGTCAAGAACAAAGAAGTGCATCATATTCACCATTATCATTATAGTTTTAATTCTCATTTCCTTGTTCATCTTATGGCTCATCACCATGACCAATAAAGTCAAATTCCAAGTGACCAACGCCAACCTGACCCAATTCAACTTCACCGACGACAGCCAACTCCTCTTCCAACTCAGCCTTAACATGACTGTCAAAAACCCTAATCGCGGCTTTGAAGTTTTCTTTGACAGCATCAAAGTGGTTGTGTTGTATCAAGACATTAAGTTTAGCAACGTATCGCTGTCGCCATTTTACCAAGGCCAAGAGGGAAGAAGCTTGCTGAATTTAAGGTTTGATGGTCAGCAATTGATGAATCTTGACGCTGAGCAGCTGGCTGTGTTCACTCTTGAGAAACTTGTTGATATCTTCTCTATTAAAGTGGAGCTTCTTCTTCATATGAGGGTTCAGATTGGTCTCATTAGGATCAAACTCAATCCCAAGCCATTTGATCACAACGATGGACTTATCAAATCCAACGGTGATTAA

Coding sequence (CDS)

ATGTCAAGAACAAAGAAGTGCATCATATTCACCATTATCATTATAGTTTTAATTCTCATTTCCTTGTTCATCTTATGGCTCATCACCATGACCAATAAAGTCAAATTCCAAGTGACCAACGCCAACCTGACCCAATTCAACTTCACCGACGACAGCCAACTCCTCTTCCAACTCAGCCTTAACATGACTGTCAAAAACCCTAATCGCGGCTTTGAAGTTTTCTTTGACAGCATCAAAGTGGTTGTGTTGTATCAAGACATTAAGTTTAGCAACGTATCGCTGTCGCCATTTTACCAAGGCCAAGAGGGAAGAAGCTTGCTGAATTTAAGGTTTGATGGTCAGCAATTGATGAATCTTGACGCTGAGCAGCTGGCTGTGTTCACTCTTGAGAAACTTGTTGATATCTTCTCTATTAAAGTGGAGCTTCTTCTTCATATGAGGGTTCAGATTGGTCTCATTAGGATCAAACTCAATCCCAAGCCATTTGATCACAACGATGGACTTATCAAATCCAACGGTGATTAA

Protein sequence

MSRTKKCIIFTIIIIVLILISLFILWLITMTNKVKFQVTNANLTQFNFTDDSQLLFQLSLNMTVKNPNRGFEVFFDSIKVVVLYQDIKFSNVSLSPFYQGQEGRSLLNLRFDGQQLMNLDAEQLAVFTLEKLVDIFSIKVELLLHMRVQIGLIRIKLNPKPFDHNDGLIKSNGD

Homology

[Close]

BLAST of HG10020062 vs. NCBI nr
Match: XP_038904446.1 (NDR1/HIN1-like protein 10 [Benincasa hispida])

HSP 1 Score: 265.8 bits (678), Expect = 2.7e-67
Identity = 144/160 (90.00%), Postives = 153/160 (95.62%), Query Frame = 0


Query: 1   MSRTKKCIIFTIIIIVLILISLFILWLITMTNKVKFQVTNANLTQFNFTDDSQLLFQLSL 60
           MSRTKK IIFTIIIIVL+LISLFILWLIT T+K+KFQVTNANLTQFNFTDDSQLLFQLSL
Sbjct: 1   MSRTKKFIIFTIIIIVLVLISLFILWLITKTHKLKFQVTNANLTQFNFTDDSQLLFQLSL 60

Query: 61  NMTVKNPNRGFEVFFDSIKVVVLYQDIKFSNVSLSPFYQGQEGRSLLNLRFDGQQLMNLD 120
           NMTVKNPNRGF VFFDSI+VVVLYQDIKFSNVSLSPFYQGQEG+SLLNL FDGQQLMNLD
Sbjct: 61  NMTVKNPNRGFGVFFDSIEVVVLYQDIKFSNVSLSPFYQGQEGKSLLNLSFDGQQLMNLD 120

Query: 121 AEQLAVFTLEKLVDIFSIKVELLLHMRVQIGLIRIKLNPK 161
           A+QLAVFTLEKL+DIFSIK+EL L MRV+IG IRIKLNPK
Sbjct: 121 AQQLAVFTLEKLLDIFSIKLELRLRMRVKIGFIRIKLNPK 160

[Close]

BLAST of HG10020062 vs. NCBI nr
Match: KAE8651106.1 (hypothetical protein Csa_001623 [Cucumis sativus])

HSP 1 Score: 264.2 bits (674), Expect = 7.8e-67
Identity = 142/160 (88.75%), Postives = 150/160 (93.75%), Query Frame = 0


Query: 1   MSRTKKCIIFTIIIIVLILISLFILWLITMTNKVKFQVTNANLTQFNFTDDSQLLFQLSL 60
           MSRTKKCIIFTI+IIVLILISLFILWL+TMT K+KFQV NANLTQFN TDDSQLLFQLSL
Sbjct: 1   MSRTKKCIIFTIVIIVLILISLFILWLMTMTRKLKFQVNNANLTQFNLTDDSQLLFQLSL 60

Query: 61  NMTVKNPNRGFEVFFDSIKVVVLYQDIKFSNVSLSPFYQGQEGRSLLNLRFDGQQLMNLD 120
           NMTVKNPNRGF VFFDSI+V VLYQ IKFSNVSLSPFYQGQEG+S LN RFDGQQLMNLD
Sbjct: 61  NMTVKNPNRGFGVFFDSIEVAVLYQGIKFSNVSLSPFYQGQEGKSSLNFRFDGQQLMNLD 120

Query: 121 AEQLAVFTLEKLVDIFSIKVELLLHMRVQIGLIRIKLNPK 161
           A+QLAVFTLE+LVDIFSIKVEL LHMRV+IG IRIKLNPK
Sbjct: 121 AKQLAVFTLEQLVDIFSIKVELRLHMRVKIGFIRIKLNPK 160

[Close]

BLAST of HG10020062 vs. NCBI nr
Match: XP_004136710.2 (uncharacterized protein LOC101218041 [Cucumis sativus])

HSP 1 Score: 264.2 bits (674), Expect = 7.8e-67
Identity = 142/160 (88.75%), Postives = 150/160 (93.75%), Query Frame = 0


Query: 1   MSRTKKCIIFTIIIIVLILISLFILWLITMTNKVKFQVTNANLTQFNFTDDSQLLFQLSL 60
           MSRTKKCIIFTI+IIVLILISLFILWL+TMT K+KFQV NANLTQFN TDDSQLLFQLSL
Sbjct: 1   MSRTKKCIIFTIVIIVLILISLFILWLMTMTRKLKFQVNNANLTQFNLTDDSQLLFQLSL 60

Query: 61  NMTVKNPNRGFEVFFDSIKVVVLYQDIKFSNVSLSPFYQGQEGRSLLNLRFDGQQLMNLD 120
           NMTVKNPNRGF VFFDSI+V VLYQ IKFSNVSLSPFYQGQEG+S LN RFDGQQLMNLD
Sbjct: 61  NMTVKNPNRGFGVFFDSIEVAVLYQGIKFSNVSLSPFYQGQEGKSSLNFRFDGQQLMNLD 120

Query: 121 AEQLAVFTLEKLVDIFSIKVELLLHMRVQIGLIRIKLNPK 161
           A+QLAVFTLE+LVDIFSIKVEL LHMRV+IG IRIKLNPK
Sbjct: 121 AKQLAVFTLEQLVDIFSIKVELRLHMRVKIGFIRIKLNPK 160

[Close]

BLAST of HG10020062 vs. NCBI nr
Match: TYK25308.1 (NDR1/HIN1-Like protein 3-like [Cucumis melo var. makuwa])

HSP 1 Score: 251.9 bits (642), Expect = 4.0e-63
Identity = 136/160 (85.00%), Postives = 148/160 (92.50%), Query Frame = 0


Query: 1   MSRTKKCIIFTIIIIVLILISLFILWLITMTNKVKFQVTNANLTQFNFTDDSQLLFQLSL 60
           MSRTKK IIF+II+IVLILISLFILWL+TMT K+KFQV NA LT+FN T+ SQLLFQLSL
Sbjct: 1   MSRTKKFIIFSIIVIVLILISLFILWLMTMTRKLKFQVNNAKLTKFNLTNGSQLLFQLSL 60

Query: 61  NMTVKNPNRGFEVFFDSIKVVVLYQDIKFSNVSLSPFYQGQEGRSLLNLRFDGQQLMNLD 120
           NM V+NPNRGF VFFDSI+V VLYQDIKFSN+SLSPFYQG+EG+SLLN RFDGQQLMNLD
Sbjct: 61  NMMVQNPNRGFGVFFDSIEVAVLYQDIKFSNMSLSPFYQGEEGKSLLNFRFDGQQLMNLD 120

Query: 121 AEQLAVFTLEKLVDIFSIKVELLLHMRVQIGLIRIKLNPK 161
           AEQLAVFTLEKLVDIFSIKVEL LHMRV+IG IRIKLNPK
Sbjct: 121 AEQLAVFTLEKLVDIFSIKVELRLHMRVKIGFIRIKLNPK 160

[Close]

BLAST of HG10020062 vs. NCBI nr
Match: XP_023005830.1 (NDR1/HIN1-like protein 3 [Cucurbita maxima])

HSP 1 Score: 218.4 bits (555), Expect = 4.9e-53
Identity = 117/161 (72.67%), Postives = 138/161 (85.71%), Query Frame = 0


Query: 1   MSRTKKC-IIFTIIIIVLILISLFILWLITMTNKVKFQVTNANLTQFNFTDDSQLLFQLS 60
           MSRTKKC IIF III+VL+L+SL I+WLITM NK+KF V  A+LTQFNFTDD+QLLF L+
Sbjct: 1   MSRTKKCMIIFLIIILVLVLLSLLIVWLITMANKIKFHVIGADLTQFNFTDDNQLLFDLT 60

Query: 61  LNMTVKNPNRGFEVFFDSIKVVVLYQDIKFSNVSLSPFYQGQEGRSLLNLRFDGQQLMNL 120
           +NM VKNPNR F VFFD I+V +LYQDIKFSN S+SPFYQGQ+G  LL L+FDGQQLMNL
Sbjct: 61  VNMKVKNPNRAFGVFFDRIEVTLLYQDIKFSNASMSPFYQGQDGSKLLKLKFDGQQLMNL 120

Query: 121 DAEQLAVFTLEKLVDIFSIKVELLLHMRVQIGLIRIKLNPK 161
           +AEQLAVF LEKLV+IF++K+EL L +RV I LI+IKL PK
Sbjct: 121 NAEQLAVFGLEKLVEIFTLKLELRLQIRVNIDLIKIKLKPK 161

[Close]

BLAST of HG10020062 vs. ExPASy Swiss-Prot
Match: Q9SJ52 (NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 1.0e-16
Identity = 49/151 (32.45%), Postives = 94/151 (62.25%), Query Frame = 0


Query: 12  IIIIVLILISLFILWLITMTNKVKFQVTNANLTQFNFTD-DSQLLFQLSLNMTVKNPNRG 71
           I +IV++ ++  I WLI     +KF VT+A+LT+F+ T  D+ L + L+L + V+NPN+ 
Sbjct: 46  ISLIVILGVAALIFWLIVRPRAIKFHVTDASLTRFDHTSPDNILRYNLALTVPVRNPNKR 105

Query: 72  FEVFFDSIKVVVLYQDIKFSNVSLSPFYQGQEGRSLLNLRFDGQQLMNLDAEQLAVFTLE 131
             +++D I+    Y+  +FS ++L+PFYQG +  ++L   F GQ L+  +A Q      E
Sbjct: 106 IGLYYDRIEAHAYYEGKRFSTITLTPFYQGHKNTTVLTPTFQGQNLVIFNAGQSRTLNAE 165

Query: 132 KLVDIFSIKVELLLHMRVQIGLIRI-KLNPK 161
           ++  +++I+++  L +R ++G ++  ++ PK
Sbjct: 166 RISGVYNIEIKFRLRVRFKLGDLKFRRIKPK 196

[Close]

BLAST of HG10020062 vs. ExPASy Swiss-Prot
Match: Q9FNH6 (NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=NHL3 PE=1 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 5.5e-15
Identity = 54/150 (36.00%), Postives = 87/150 (58.00%), Query Frame = 0


Query: 8   IIFTIIIIVLIL--ISLFILWLITMTNKVKFQVTNANLTQFNFTDDSQLLFQLSLNMTVK 67
           +IF I+I + +L  I+  I+WLI   N +KF VT+A LT+F     + L + L LN T++
Sbjct: 47  VIFNILITIAVLLGIAALIIWLIFRPNAIKFHVTDAKLTEFTLDPTNNLRYNLDLNFTIR 106

Query: 68  NPNRGFEVFFDSIKVVVLYQDIKFS-NVSLSPFYQGQEGRSLLNLRFDGQQLMNLDAEQL 127
           NPNR   V++D I+V   Y D +F  + ++S FYQG +  +++  +  GQQL+ LD  + 
Sbjct: 107 NPNRRIGVYYDEIEVRGYYGDQRFGMSNNISKFYQGHKNTTVVGTKLVGQQLVLLDGGER 166

Query: 128 AVFTLEKLVDIFSIKVELLLHMRVQIGLIR 155
                +    I+ I  +L L +R + GLI+
Sbjct: 167 KDLNEDVNSQIYRIDAKLRLKIRFKFGLIK 196

[Close]

BLAST of HG10020062 vs. ExPASy Swiss-Prot
Match: Q9SRN1 (NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=NHL2 PE=2 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 3.0e-13
Identity = 53/161 (32.92%), Postives = 88/161 (54.66%), Query Frame = 0


Query: 7   CIIFTIIIIVLILISL------FILWLITMTNKVKFQVTNANLTQFNFTDDSQLLFQLSL 66
           C I ++I  +LI +++       ILWLI   N VKF V +ANL +F+F  ++ L + L L
Sbjct: 49  CCILSLICNILIAVAVILGVAALILWLIFRPNAVKFYVADANLNRFSFDPNNNLHYSLDL 108

Query: 67  NMTVKNPNRGFEVFFDSIKVVVLYQDIKFSNVSLSPFYQGQEGRSLLNLRFDGQQLMNLD 126
           N T++NPN+   V++D   V   Y D +F + ++S FYQG +  +++  + +GQ L+ L 
Sbjct: 109 NFTIRNPNQRVGVYYDEFSVSGYYGDQRFGSANVSSFYQGHKNTTVILTKIEGQNLVVLG 168

Query: 127 AEQLAVFTLEKLVDIFSIKVELLLHMRVQIGLIRI-KLNPK 161
                    ++   I+ I  +L L +R +   I+  KL PK
Sbjct: 169 DGARTDLKDDEKSGIYRINAKLRLSVRFKFWFIKSWKLKPK 209

[Close]

BLAST of HG10020062 vs. ExPASy Swiss-Prot
Match: Q9C615 (Putative syntaxin-24 OS=Arabidopsis thaliana OX=3702 GN=SYP24 PE=3 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.1e-10
Identity = 36/120 (30.00%), Postives = 64/120 (53.33%), Query Frame = 0


Query: 31  TNKVKFQVTNANLTQFNFTDDSQLLFQLSLNMTVKNPNRGFEVFFDSIKVVVLYQDIKFS 90
           +N VKFQV +A LT F+   ++ L + LSLN++++N      + +D  +  V Y + +  
Sbjct: 4   SNDVKFQVYDAELTHFDLESNNNLQYSLSLNLSIRNSKSSIGIHYDRFEATVYYMNQRLG 63

Query: 91  NVSLSPFYQGQEGRSLLNLRFDGQQLMNLDAEQLAVFTLEKLVDIFSIKVELLLHMRVQI 150
            V +  FY G +   LL   F+GQ L+ L   +   F  ++   ++ I V+L ++ RV +
Sbjct: 64  AVPMPLFYLGSKNTMLLRALFEGQTLVLLKGNERKKFEDDQKTGVYRIDVKLSINFRVMV 123

[Close]

BLAST of HG10020062 vs. ExPASy Swiss-Prot
Match: Q8LD98 (NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=NHL6 PE=1 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 1.4e-05
Identity = 36/147 (24.49%), Postives = 73/147 (49.66%), Query Frame = 0


Query: 10  FTIIIIVLILISLFILWLITMTNKVKFQVTNANLTQFNFTDDSQLLFQLSLNMTVKNPNR 69
           F ++++V +  S+ IL+L+       + +    LT+F    DS L    ++ +T KNPN 
Sbjct: 72  FLLLLVVAVGASIGILYLVFKPKLPDYSIDRLQLTRFALNQDSSLTTAFNVTITAKNPNE 131

Query: 70  GFEVFF-DSIKVVVLYQDIKFSNVSLSPFYQGQEGRSLLNLRFDGQQLMNLDAEQLAVFT 129
              +++ D  K+ V Y + + SN SL  FYQG E  +++ +   G Q  N    +  +  
Sbjct: 132 KIGIYYEDGSKITVWYMEHQLSNGSLPKFYQGHENTTVIYVEMTG-QTQNASGLRTTLEE 191

Query: 130 LEKLVDIFSIKVELLLHMRVQIGLIRI 156
            ++      +++ +   +RV+ G +++
Sbjct: 192 QQQRTGNIPLRIRVNQPVRVKFGKLKL 217

[Close]

BLAST of HG10020062 vs. ExPASy TrEMBL
Match: A0A5D3DNY5 (NDR1/HIN1-Like protein 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G004460 PE=4 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 1.9e-63
Identity = 136/160 (85.00%), Postives = 148/160 (92.50%), Query Frame = 0


Query: 1   MSRTKKCIIFTIIIIVLILISLFILWLITMTNKVKFQVTNANLTQFNFTDDSQLLFQLSL 60
           MSRTKK IIF+II+IVLILISLFILWL+TMT K+KFQV NA LT+FN T+ SQLLFQLSL
Sbjct: 1   MSRTKKFIIFSIIVIVLILISLFILWLMTMTRKLKFQVNNAKLTKFNLTNGSQLLFQLSL 60

Query: 61  NMTVKNPNRGFEVFFDSIKVVVLYQDIKFSNVSLSPFYQGQEGRSLLNLRFDGQQLMNLD 120
           NM V+NPNRGF VFFDSI+V VLYQDIKFSN+SLSPFYQG+EG+SLLN RFDGQQLMNLD
Sbjct: 61  NMMVQNPNRGFGVFFDSIEVAVLYQDIKFSNMSLSPFYQGEEGKSLLNFRFDGQQLMNLD 120

Query: 121 AEQLAVFTLEKLVDIFSIKVELLLHMRVQIGLIRIKLNPK 161
           AEQLAVFTLEKLVDIFSIKVEL LHMRV+IG IRIKLNPK
Sbjct: 121 AEQLAVFTLEKLVDIFSIKVELRLHMRVKIGFIRIKLNPK 160

[Close]

BLAST of HG10020062 vs. ExPASy TrEMBL
Match: A0A0A0LBJ3 (LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G778980 PE=4 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 4.3e-55
Identity = 116/133 (87.22%), Postives = 123/133 (92.48%), Query Frame = 0


Query: 28  ITMTNKVKFQVTNANLTQFNFTDDSQLLFQLSLNMTVKNPNRGFEVFFDSIKVVVLYQDI 87
           +TMT K+KFQV NANLTQFN TDDSQLLFQLSLNMTVKNPNRGF VFFDSI+V VLYQ I
Sbjct: 1   MTMTRKLKFQVNNANLTQFNLTDDSQLLFQLSLNMTVKNPNRGFGVFFDSIEVAVLYQGI 60

Query: 88  KFSNVSLSPFYQGQEGRSLLNLRFDGQQLMNLDAEQLAVFTLEKLVDIFSIKVELLLHMR 147
           KFSNVSLSPFYQGQEG+S LN RFDGQQLMNLDA+QLAVFTLE+LVDIFSIKVEL LHMR
Sbjct: 61  KFSNVSLSPFYQGQEGKSSLNFRFDGQQLMNLDAKQLAVFTLEQLVDIFSIKVELRLHMR 120

Query: 148 VQIGLIRIKLNPK 161
           V+IG IRIKLNPK
Sbjct: 121 VKIGFIRIKLNPK 133

[Close]

BLAST of HG10020062 vs. ExPASy TrEMBL
Match: A0A6J1KYH7 (NDR1/HIN1-like protein 3 OS=Cucurbita maxima OX=3661 GN=LOC111498716 PE=4 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 2.4e-53
Identity = 117/161 (72.67%), Postives = 138/161 (85.71%), Query Frame = 0


Query: 1   MSRTKKC-IIFTIIIIVLILISLFILWLITMTNKVKFQVTNANLTQFNFTDDSQLLFQLS 60
           MSRTKKC IIF III+VL+L+SL I+WLITM NK+KF V  A+LTQFNFTDD+QLLF L+
Sbjct: 1   MSRTKKCMIIFLIIILVLVLLSLLIVWLITMANKIKFHVIGADLTQFNFTDDNQLLFDLT 60

Query: 61  LNMTVKNPNRGFEVFFDSIKVVVLYQDIKFSNVSLSPFYQGQEGRSLLNLRFDGQQLMNL 120
           +NM VKNPNR F VFFD I+V +LYQDIKFSN S+SPFYQGQ+G  LL L+FDGQQLMNL
Sbjct: 61  VNMKVKNPNRAFGVFFDRIEVTLLYQDIKFSNASMSPFYQGQDGSKLLKLKFDGQQLMNL 120

Query: 121 DAEQLAVFTLEKLVDIFSIKVELLLHMRVQIGLIRIKLNPK 161
           +AEQLAVF LEKLV+IF++K+EL L +RV I LI+IKL PK
Sbjct: 121 NAEQLAVFGLEKLVEIFTLKLELRLQIRVNIDLIKIKLKPK 161

[Close]

BLAST of HG10020062 vs. ExPASy TrEMBL
Match: A0A5A7TKH6 (NDR1/HIN1-Like protein 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G001570 PE=4 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 4.0e-53
Identity = 112/133 (84.21%), Postives = 122/133 (91.73%), Query Frame = 0


Query: 28  ITMTNKVKFQVTNANLTQFNFTDDSQLLFQLSLNMTVKNPNRGFEVFFDSIKVVVLYQDI 87
           +TMT K+KFQV NA LT+FN T+ SQLLFQLSLNM V+NPNRGF VFFDSI+V VLYQDI
Sbjct: 1   MTMTRKLKFQVNNAKLTKFNLTNGSQLLFQLSLNMMVQNPNRGFGVFFDSIEVAVLYQDI 60

Query: 88  KFSNVSLSPFYQGQEGRSLLNLRFDGQQLMNLDAEQLAVFTLEKLVDIFSIKVELLLHMR 147
           KFSN+SLSPFYQG+EG+SLLN RFDGQQLMNLDAEQLAVFTLEKLVDIFSIKVEL LHMR
Sbjct: 61  KFSNMSLSPFYQGEEGKSLLNFRFDGQQLMNLDAEQLAVFTLEKLVDIFSIKVELRLHMR 120

Query: 148 VQIGLIRIKLNPK 161
           V+IG IRIKLNPK
Sbjct: 121 VKIGFIRIKLNPK 133

[Close]

BLAST of HG10020062 vs. ExPASy TrEMBL
Match: A0A6J1H1R7 (NDR1/HIN1-like protein 3 OS=Cucurbita moschata OX=3662 GN=LOC111459233 PE=4 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 1.2e-52
Identity = 117/161 (72.67%), Postives = 136/161 (84.47%), Query Frame = 0


Query: 1   MSRTKKC-IIFTIIIIVLILISLFILWLITMTNKVKFQVTNANLTQFNFTDDSQLLFQLS 60
           MSRTKKC IIF III+VL+L+SL I+WLITM NK+KF V +A+LTQFNFTDD QLLF L+
Sbjct: 1   MSRTKKCMIIFLIIILVLVLLSLLIVWLITMANKIKFHVIDADLTQFNFTDDKQLLFDLT 60

Query: 61  LNMTVKNPNRGFEVFFDSIKVVVLYQDIKFSNVSLSPFYQGQEGRSLLNLRFDGQQLMNL 120
           +NM VKNPNR F VFFD I+V VLYQDIKFSN SLSPFYQ Q+G  LL L+FDGQQLMNL
Sbjct: 61  VNMKVKNPNRAFGVFFDRIEVTVLYQDIKFSNASLSPFYQAQDGSKLLKLKFDGQQLMNL 120

Query: 121 DAEQLAVFTLEKLVDIFSIKVELLLHMRVQIGLIRIKLNPK 161
           +AEQLAVF LEKLV+ F++K+EL L +RV I LI+IKL PK
Sbjct: 121 NAEQLAVFGLEKLVETFTLKLELRLQIRVNIDLIKIKLKPK 161

[Close]

BLAST of HG10020062 vs. TAIR 10
Match: AT2G35980.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 88.2 bits (217), Expect = 7.1e-18
Identity = 49/151 (32.45%), Postives = 94/151 (62.25%), Query Frame = 0


Query: 12  IIIIVLILISLFILWLITMTNKVKFQVTNANLTQFNFTD-DSQLLFQLSLNMTVKNPNRG 71
           I +IV++ ++  I WLI     +KF VT+A+LT+F+ T  D+ L + L+L + V+NPN+ 
Sbjct: 46  ISLIVILGVAALIFWLIVRPRAIKFHVTDASLTRFDHTSPDNILRYNLALTVPVRNPNKR 105

Query: 72  FEVFFDSIKVVVLYQDIKFSNVSLSPFYQGQEGRSLLNLRFDGQQLMNLDAEQLAVFTLE 131
             +++D I+    Y+  +FS ++L+PFYQG +  ++L   F GQ L+  +A Q      E
Sbjct: 106 IGLYYDRIEAHAYYEGKRFSTITLTPFYQGHKNTTVLTPTFQGQNLVIFNAGQSRTLNAE 165

Query: 132 KLVDIFSIKVELLLHMRVQIGLIRI-KLNPK 161
           ++  +++I+++  L +R ++G ++  ++ PK
Sbjct: 166 RISGVYNIEIKFRLRVRFKLGDLKFRRIKPK 196

[Close]

BLAST of HG10020062 vs. TAIR 10
Match: AT5G06320.1 (NDR1/HIN1-like 3 )

HSP 1 Score: 82.4 bits (202), Expect = 3.9e-16
Identity = 54/150 (36.00%), Postives = 87/150 (58.00%), Query Frame = 0


Query: 8   IIFTIIIIVLIL--ISLFILWLITMTNKVKFQVTNANLTQFNFTDDSQLLFQLSLNMTVK 67
           +IF I+I + +L  I+  I+WLI   N +KF VT+A LT+F     + L + L LN T++
Sbjct: 47  VIFNILITIAVLLGIAALIIWLIFRPNAIKFHVTDAKLTEFTLDPTNNLRYNLDLNFTIR 106

Query: 68  NPNRGFEVFFDSIKVVVLYQDIKFS-NVSLSPFYQGQEGRSLLNLRFDGQQLMNLDAEQL 127
           NPNR   V++D I+V   Y D +F  + ++S FYQG +  +++  +  GQQL+ LD  + 
Sbjct: 107 NPNRRIGVYYDEIEVRGYYGDQRFGMSNNISKFYQGHKNTTVVGTKLVGQQLVLLDGGER 166

Query: 128 AVFTLEKLVDIFSIKVELLLHMRVQIGLIR 155
                +    I+ I  +L L +R + GLI+
Sbjct: 167 KDLNEDVNSQIYRIDAKLRLKIRFKFGLIK 196

[Close]

BLAST of HG10020062 vs. TAIR 10
Match: AT3G11650.1 (NDR1/HIN1-like 2 )

HSP 1 Score: 76.6 bits (187), Expect = 2.1e-14
Identity = 53/161 (32.92%), Postives = 88/161 (54.66%), Query Frame = 0


Query: 7   CIIFTIIIIVLILISL------FILWLITMTNKVKFQVTNANLTQFNFTDDSQLLFQLSL 66
           C I ++I  +LI +++       ILWLI   N VKF V +ANL +F+F  ++ L + L L
Sbjct: 49  CCILSLICNILIAVAVILGVAALILWLIFRPNAVKFYVADANLNRFSFDPNNNLHYSLDL 108

Query: 67  NMTVKNPNRGFEVFFDSIKVVVLYQDIKFSNVSLSPFYQGQEGRSLLNLRFDGQQLMNLD 126
           N T++NPN+   V++D   V   Y D +F + ++S FYQG +  +++  + +GQ L+ L 
Sbjct: 109 NFTIRNPNQRVGVYYDEFSVSGYYGDQRFGSANVSSFYQGHKNTTVILTKIEGQNLVVLG 168

Query: 127 AEQLAVFTLEKLVDIFSIKVELLLHMRVQIGLIRI-KLNPK 161
                    ++   I+ I  +L L +R +   I+  KL PK
Sbjct: 169 DGARTDLKDDEKSGIYRINAKLRLSVRFKFWFIKSWKLKPK 209

[Close]

BLAST of HG10020062 vs. TAIR 10
Match: AT2G35460.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 74.7 bits (182), Expect = 8.1e-14
Identity = 51/149 (34.23%), Postives = 86/149 (57.72%), Query Frame = 0


Query: 8   IIFTIIIIVLILISL--FILWLITMTNKVKFQVTNANLTQFNFTDDS-QLLFQLSLNMTV 67
           II  I+I VL+ + +   ILW I   N VKFQVT A+LT+F F   S  L + +SLN ++
Sbjct: 53  IICNILIGVLVCLGVVALILWFILRPNVVKFQVTEADLTRFEFDPRSHNLHYNISLNFSI 112

Query: 68  KNPNRGFEVFFDSIKVVVLYQDIKFSNVSLSPFYQGQEGRSLLNLRFDGQQLMNLDAEQL 127
           +NPN+   + +D ++V   Y D +FS  +++ FYQG +  +++    +GQ+L+ L A   
Sbjct: 113 RNPNQRLGIHYDQLEVRGYYGDQRFSAANMTSFYQGHKNTTVVGTELNGQKLVLLGAGGR 172

Query: 128 AVFTLEKLVDIFSIKVELLLHMRVQIGLI 154
             F  ++   ++ I V+L   +R + G +
Sbjct: 173 RDFREDRRSGVYRIDVKLRFKLRFKFGFL 201

[Close]

BLAST of HG10020062 vs. TAIR 10
Match: AT1G32270.1 (syntaxin, putative )

HSP 1 Score: 68.2 bits (165), Expect = 7.6e-12
Identity = 36/120 (30.00%), Postives = 64/120 (53.33%), Query Frame = 0


Query: 31  TNKVKFQVTNANLTQFNFTDDSQLLFQLSLNMTVKNPNRGFEVFFDSIKVVVLYQDIKFS 90
           +N VKFQV +A LT F+   ++ L + LSLN++++N      + +D  +  V Y + +  
Sbjct: 4   SNDVKFQVYDAELTHFDLESNNNLQYSLSLNLSIRNSKSSIGIHYDRFEATVYYMNQRLG 63

Query: 91  NVSLSPFYQGQEGRSLLNLRFDGQQLMNLDAEQLAVFTLEKLVDIFSIKVELLLHMRVQI 150
            V +  FY G +   LL   F+GQ L+ L   +   F  ++   ++ I V+L ++ RV +
Sbjct: 64  AVPMPLFYLGSKNTMLLRALFEGQTLVLLKGNERKKFEDDQKTGVYRIDVKLSINFRVMV 123

The following BLAST results are available for this feature:

BLAST of HG10020062 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038904446.1	2.7e-67	90.00	NDR1/HIN1-like protein 10 [Benincasa hispida]	[more]
KAE8651106.1	7.8e-67	88.75	hypothetical protein Csa_001623 [Cucumis sativus]	[more]
XP_004136710.2	7.8e-67	88.75	uncharacterized protein LOC101218041 [Cucumis sativus]	[more]
TYK25308.1	4.0e-63	85.00	NDR1/HIN1-Like protein 3-like [Cucumis melo var. makuwa]	[more]
XP_023005830.1	4.9e-53	72.67	NDR1/HIN1-like protein 3 [Cucurbita maxima]	[more]

BLAST of HG10020062 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SJ52	1.0e-16	32.45	NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1	[more]
Q9FNH6	5.5e-15	36.00	NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=NHL3 PE=1 SV=1	[more]
Q9SRN1	3.0e-13	32.92	NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=NHL2 PE=2 SV=1	[more]
Q9C615	1.1e-10	30.00	Putative syntaxin-24 OS=Arabidopsis thaliana OX=3702 GN=SYP24 PE=3 SV=1	[more]
Q8LD98	1.4e-05	24.49	NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=NHL6 PE=1 SV=1	[more]

BLAST of HG10020062 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DNY5	1.9e-63	85.00	NDR1/HIN1-Like protein 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A0A0LBJ3	4.3e-55	87.22	LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G778980 PE=4 ...	[more]
A0A6J1KYH7	2.4e-53	72.67	NDR1/HIN1-like protein 3 OS=Cucurbita maxima OX=3661 GN=LOC111498716 PE=4 SV=1	[more]
A0A5A7TKH6	4.0e-53	84.21	NDR1/HIN1-Like protein 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc...	[more]
A0A6J1H1R7	1.2e-52	72.67	NDR1/HIN1-like protein 3 OS=Cucurbita moschata OX=3662 GN=LOC111459233 PE=4 SV=1	[more]

BLAST of HG10020062 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G35980.1	7.1e-18	32.45	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT5G06320.1	3.9e-16	36.00	NDR1/HIN1-like 3	[more]
AT3G11650.1	2.1e-14	32.92	NDR1/HIN1-like 2	[more]
AT2G35460.1	8.1e-14	34.23	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT1G32270.1	7.6e-12	30.00	syntaxin, putative	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR044839	Protein NDR1-like	PANTHER	PTHR31415	OS05G0367900 PROTEIN	coord: 8..173
None	No IPR available	PANTHER	PTHR31415:SF105	LATE EMBRYOGENESIS ABUNDANT PROTEIN	coord: 8..173

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10020062.1	HG10020062.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0098542	defense response to other organism
cellular_component	GO:0016021	integral component of membrane