Homology
BLAST of HG10020037 vs. NCBI nr
Match:
XP_038904039.1 (33 kDa ribonucleoprotein, chloroplastic [Benincasa hispida])
HSP 1 Score: 582.8 bits (1501), Expect = 2.4e-162
Identity = 307/323 (95.05%), Postives = 311/323 (96.28%), Query Frame = 0
Query: 103 MSASSVSMAAAAATSVSSSSPLCKKLFFTQHPNQIPSHFSLKQNPLKLLNLRIHLPNFYP 162
MSASSVSMAAAAA SVSSSSPL KKLFFTQHPNQIPSHFS KQNPLKLLNL IHLPNFYP
Sbjct: 1 MSASSVSMAAAAAPSVSSSSPLSKKLFFTQHPNQIPSHFSPKQNPLKLLNLTIHLPNFYP 60
Query: 163 LSFSSASHLYSAPPAFDGLEVSDSETEYAEIQESDGEEETHEEDEQKVSVSREAGKLYIG 222
LSFSS SHL+S PPAFDGLEVSD ETEYAEIQESD EEET EEDEQKVSVSREAGKLYIG
Sbjct: 61 LSFSSPSHLHSVPPAFDGLEVSDPETEYAEIQESDAEEETQEEDEQKVSVSREAGKLYIG 120
Query: 223 NLPYAMTSSQLTEVFAEAGHVVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAIRMFDGSQ 282
NLPYAMTSSQL+EVFAEAGHVVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAIRMFDGSQ
Sbjct: 121 NLPYAMTSSQLSEVFAEAGHVVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAIRMFDGSQ 180
Query: 283 IGGRTVRVNFPEVPRGGEKEVMGPKIRSSYNKFVDSPHKIYAGNLGWGLTSQSLRDAFEN 342
IGGRTVRVNFPEVPRGGEKEVMGPKIRSSYNKFVDSPHKIYAGNLGWGLTSQSLR+AFEN
Sbjct: 181 IGGRTVRVNFPEVPRGGEKEVMGPKIRSSYNKFVDSPHKIYAGNLGWGLTSQSLREAFEN 240
Query: 343 QPGILSAKVIYDRASGKSRGFGFVSFETAEDAESALESMNGVEVEGRPLRLNIAAGQAPT 402
QPGILSAKVIYDRASGKSRGFGFVSFETAEDAE ALESMNGVEVEGRPLRLNIAAG+APT
Sbjct: 241 QPGILSAKVIYDRASGKSRGFGFVSFETAEDAEFALESMNGVEVEGRPLRLNIAAGRAPT 300
Query: 403 SPAAFTRTENAIDSKELLTSISA 426
SPAAF RTEN IDSKELLTSISA
Sbjct: 301 SPAAFPRTENTIDSKELLTSISA 323
BLAST of HG10020037 vs. NCBI nr
Match:
KAA0043803.1 (33 kDa ribonucleoprotein [Cucumis melo var. makuwa])
HSP 1 Score: 575.1 bits (1481), Expect = 5.0e-160
Identity = 300/341 (87.98%), Postives = 315/341 (92.38%), Query Frame = 0
Query: 85 QKSISVIWGFHHFHFLPQMSASSVSMAAAAATSVSSSSPLCKKLFFTQHPNQIPSHFSLK 144
+KSI + W F H H+LPQMSA S+AAAAA + +SSSPL KK FFTQHPNQIPSHFS K
Sbjct: 30 EKSIPIAWEFRHSHYLPQMSA--YSLAAAAAAASASSSPLYKKHFFTQHPNQIPSHFSPK 89
Query: 145 QNPLKLLNLRIHLPNFYPLSFSSASHLYSAPPAFDGLEVSDSETEYAEIQESDGEEETHE 204
N LKLLNL IHLPNFYPLSFSS SH++ APPAFD LE+SD ETEY ++QESDGEE+T E
Sbjct: 90 HNKLKLLNLTIHLPNFYPLSFSSVSHVHCAPPAFDELEISDPETEYGDVQESDGEEQTQE 149
Query: 205 EDEQKVSVSREAGKLYIGNLPYAMTSSQLTEVFAEAGHVVSVQVIYDKVTDRSRGFAFVT 264
EDEQK+SVSREAGKLYIGNLPYAMTSSQL+EVFAEAG VVSVQVIYDKVTDRSRGFAFVT
Sbjct: 150 EDEQKISVSREAGKLYIGNLPYAMTSSQLSEVFAEAGQVVSVQVIYDKVTDRSRGFAFVT 209
Query: 265 MATLEEAKEAIRMFDGSQIGGRTVRVNFPEVPRGGEKEVMGPKIRSSYNKFVDSPHKIYA 324
MATLEEAKEAIRMFDGSQIGGRTVRVNFPEVPRGGEKEVMGPKIRSSYNKFVDSPHKIYA
Sbjct: 210 MATLEEAKEAIRMFDGSQIGGRTVRVNFPEVPRGGEKEVMGPKIRSSYNKFVDSPHKIYA 269
Query: 325 GNLGWGLTSQSLRDAFENQPGILSAKVIYDRASGKSRGFGFVSFETAEDAESALESMNGV 384
GNLGWGLTSQSLRDAFENQPGILSAKVIYDRASGKSRGFGFVSFETAEDAESALESMNGV
Sbjct: 270 GNLGWGLTSQSLRDAFENQPGILSAKVIYDRASGKSRGFGFVSFETAEDAESALESMNGV 329
Query: 385 EVEGRPLRLNIAAGQAPTSPAAFTRTENAIDSKELLTSISA 426
EVEGRPLRLNIAA +APTSPAAF RTEN IDSKELLTSISA
Sbjct: 330 EVEGRPLRLNIAAERAPTSPAAFPRTENTIDSKELLTSISA 368
BLAST of HG10020037 vs. NCBI nr
Match:
XP_004136521.3 (33 kDa ribonucleoprotein, chloroplastic [Cucumis sativus] >KAE8651116.1 hypothetical protein Csa_001333 [Cucumis sativus])
HSP 1 Score: 554.3 bits (1427), Expect = 9.2e-154
Identity = 291/323 (90.09%), Postives = 299/323 (92.57%), Query Frame = 0
Query: 103 MSASSVSMAAAAATSVSSSSPLCKKLFFTQHPNQIPSHFSLKQNPLKLLNLRIHLPNFYP 162
MSA S+SMAAAAA + SSSPL K FFTQHPNQIPSHFS K N LKLLNL H PNFYP
Sbjct: 1 MSAYSLSMAAAAAAASVSSSPLYNKHFFTQHPNQIPSHFSPKHNQLKLLNLTFHSPNFYP 60
Query: 163 LSFSSASHLYSAPPAFDGLEVSDSETEYAEIQESDGEEETHEEDEQKVSVSREAGKLYIG 222
LSFSS SHL+ APPAFD LE+SD ETEY IQESDGEEET EEDEQKVSVSREAGKLYIG
Sbjct: 61 LSFSSVSHLHCAPPAFDELEISDPETEYGHIQESDGEEETQEEDEQKVSVSREAGKLYIG 120
Query: 223 NLPYAMTSSQLTEVFAEAGHVVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAIRMFDGSQ 282
NLPYAMTSSQL+EVFAEAGHVVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAIRMFDGSQ
Sbjct: 121 NLPYAMTSSQLSEVFAEAGHVVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAIRMFDGSQ 180
Query: 283 IGGRTVRVNFPEVPRGGEKEVMGPKIRSSYNKFVDSPHKIYAGNLGWGLTSQSLRDAFEN 342
IGGRTVRVNFPEVPRGGEKEVMGP+IRSSYNKFVDSPHKIYAGNLGWGLTSQSLRDAFEN
Sbjct: 181 IGGRTVRVNFPEVPRGGEKEVMGPRIRSSYNKFVDSPHKIYAGNLGWGLTSQSLRDAFEN 240
Query: 343 QPGILSAKVIYDRASGKSRGFGFVSFETAEDAESALESMNGVEVEGRPLRLNIAAGQAPT 402
QPGILSAK+IYDRASGKSRGFGFVSFETAEDAESALESMNGVEVEGRPLRLNIAAGQ+P
Sbjct: 241 QPGILSAKIIYDRASGKSRGFGFVSFETAEDAESALESMNGVEVEGRPLRLNIAAGQSPI 300
Query: 403 SPAAFTRTENAIDSKELLTSISA 426
SPAAF RTEN ID KELLTSISA
Sbjct: 301 SPAAFPRTENTIDGKELLTSISA 323
BLAST of HG10020037 vs. NCBI nr
Match:
XP_008442930.1 (PREDICTED: 33 kDa ribonucleoprotein, chloroplastic [Cucumis melo])
HSP 1 Score: 552.7 bits (1423), Expect = 2.7e-153
Identity = 288/320 (90.00%), Postives = 301/320 (94.06%), Query Frame = 0
Query: 106 SSVSMAAAAATSVSSSSPLCKKLFFTQHPNQIPSHFSLKQNPLKLLNLRIHLPNFYPLSF 165
S+ S+AAAAA + +SSSPL KK FFTQHPNQIPSHFS K N LKLLNL IHLPNFYPLSF
Sbjct: 2 SAYSLAAAAAAASASSSPLYKKHFFTQHPNQIPSHFSPKHNKLKLLNLTIHLPNFYPLSF 61
Query: 166 SSASHLYSAPPAFDGLEVSDSETEYAEIQESDGEEETHEEDEQKVSVSREAGKLYIGNLP 225
SS SH++ APPAFD LE+SD ETEY ++QESDGEE+T EEDEQK+SVSREAGKLYIGNLP
Sbjct: 62 SSVSHIHCAPPAFDELEISDPETEYGDVQESDGEEQTQEEDEQKISVSREAGKLYIGNLP 121
Query: 226 YAMTSSQLTEVFAEAGHVVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAIRMFDGSQIGG 285
YAMTSSQL+EVFAEAG VVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAIRMFDGSQIGG
Sbjct: 122 YAMTSSQLSEVFAEAGQVVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAIRMFDGSQIGG 181
Query: 286 RTVRVNFPEVPRGGEKEVMGPKIRSSYNKFVDSPHKIYAGNLGWGLTSQSLRDAFENQPG 345
RTVRVNFPEVPRGGEKEVMGPKIRSSYNKFVDSPHKIYAGNLGWGLTSQSLRDAFENQPG
Sbjct: 182 RTVRVNFPEVPRGGEKEVMGPKIRSSYNKFVDSPHKIYAGNLGWGLTSQSLRDAFENQPG 241
Query: 346 ILSAKVIYDRASGKSRGFGFVSFETAEDAESALESMNGVEVEGRPLRLNIAAGQAPTSPA 405
ILSAKVIYDRASGKSRGFGFVSFETAEDAESALESMNGVEVEGRPLRLNIAA +APTSPA
Sbjct: 242 ILSAKVIYDRASGKSRGFGFVSFETAEDAESALESMNGVEVEGRPLRLNIAAERAPTSPA 301
Query: 406 AFTRTENAIDSKELLTSISA 426
AF RTEN IDSKELLTSISA
Sbjct: 302 AFPRTENTIDSKELLTSISA 321
BLAST of HG10020037 vs. NCBI nr
Match:
TYK25330.1 (33 kDa ribonucleoprotein [Cucumis melo var. makuwa])
HSP 1 Score: 552.4 bits (1422), Expect = 3.5e-153
Identity = 288/320 (90.00%), Postives = 301/320 (94.06%), Query Frame = 0
Query: 106 SSVSMAAAAATSVSSSSPLCKKLFFTQHPNQIPSHFSLKQNPLKLLNLRIHLPNFYPLSF 165
S+ S+AAAAA + +SSSPL KK FFTQHPNQIPSHFS K N LKLLNL IHLPNFYPLSF
Sbjct: 2 SAYSLAAAAAAASASSSPLYKKHFFTQHPNQIPSHFSPKHNKLKLLNLTIHLPNFYPLSF 61
Query: 166 SSASHLYSAPPAFDGLEVSDSETEYAEIQESDGEEETHEEDEQKVSVSREAGKLYIGNLP 225
SS SH++ APPAFD LE+SD ETEY ++QESDGEE+T EEDEQK+SVSREAGKLYIGNLP
Sbjct: 62 SSVSHVHCAPPAFDELEISDPETEYGDVQESDGEEQTQEEDEQKISVSREAGKLYIGNLP 121
Query: 226 YAMTSSQLTEVFAEAGHVVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAIRMFDGSQIGG 285
YAMTSSQL+EVFAEAG VVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAIRMFDGSQIGG
Sbjct: 122 YAMTSSQLSEVFAEAGQVVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAIRMFDGSQIGG 181
Query: 286 RTVRVNFPEVPRGGEKEVMGPKIRSSYNKFVDSPHKIYAGNLGWGLTSQSLRDAFENQPG 345
RTVRVNFPEVPRGGEKEVMGPKIRSSYNKFVDSPHKIYAGNLGWGLTSQSLRDAFENQPG
Sbjct: 182 RTVRVNFPEVPRGGEKEVMGPKIRSSYNKFVDSPHKIYAGNLGWGLTSQSLRDAFENQPG 241
Query: 346 ILSAKVIYDRASGKSRGFGFVSFETAEDAESALESMNGVEVEGRPLRLNIAAGQAPTSPA 405
ILSAKVIYDRASGKSRGFGFVSFETAEDAESALESMNGVEVEGRPLRLNIAA +APTSPA
Sbjct: 242 ILSAKVIYDRASGKSRGFGFVSFETAEDAESALESMNGVEVEGRPLRLNIAAERAPTSPA 301
Query: 406 AFTRTENAIDSKELLTSISA 426
AF RTEN IDSKELLTSISA
Sbjct: 302 AFPRTENTIDSKELLTSISA 321
BLAST of HG10020037 vs. ExPASy Swiss-Prot
Match:
P19684 (33 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris OX=4096 PE=1 SV=1)
HSP 1 Score: 318.5 bits (815), Expect = 1.1e-85
Identity = 181/330 (54.85%), Postives = 232/330 (70.30%), Query Frame = 0
Query: 103 MSASSVSMAAAAATSVSSSSPLCKKLFFTQHPNQIPSHFSLKQNPLKLLNLRIH---LPN 162
MS S AA A+TS +S L FTQ P H SL N +I+ L
Sbjct: 1 MSGCCFSFAATASTSSTSLLYL-----FTQKPKFSVDHLSLSTYNTH-FNFKINSTKLKA 60
Query: 163 FYPLS--FSSASHLYSAPPAFDGLEVSDSETEYAEIQESDGEEETHEEDEQKVSVSREAG 222
+P+S + S+ L + DG+EV + E ++ EEE E++E+ S S E G
Sbjct: 61 HFPISSLYRSSIFLSTCASVSDGVEVVQEDDEEEVALSAEEEEEIEEKEERVESESVEGG 120
Query: 223 KLYIGNLPYAMTSSQLTEVFAEAGHVVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAIRM 282
+LY+GNLP++MTSSQL+E+FAEAG V +V+++YD+VTDRSRGFAFVTM ++EEAKEAIR+
Sbjct: 121 RLYVGNLPFSMTSSQLSEIFAEAGTVANVEIVYDRVTDRSRGFAFVTMGSVEEAKEAIRL 180
Query: 283 FDGSQIGGRTVRVNFPEVPRGGEKEVMGPKIRSSYNKFVDSPHKIYAGNLGWGLTSQSLR 342
FDGSQ+GGRTV+VNFPEVPRGGE+EVM KIRS+Y FVDSPHK+Y NL W LTSQ LR
Sbjct: 181 FDGSQVGGRTVKVNFPEVPRGGEREVMSAKIRSTYQGFVDSPHKLYVANLSWALTSQGLR 240
Query: 343 DAFENQPGILSAKVIYDRASGKSRGFGFVSFETAEDAESALESMNGVEVEGRPLRLNIAA 402
DAF +QPG +SAKVIYDR+SG+SRGFGF++F +AE SAL++MN VE+EGRPLRLN+A
Sbjct: 241 DAFADQPGFMSAKVIYDRSSGRSRGFGFITFSSAEAMNSALDTMNEVELEGRPLRLNVAG 300
Query: 403 GQAPTS--PAAFTRTENAIDSKELLTSISA 426
+AP S P T EN D+ ELL+S+S+
Sbjct: 301 QKAPVSSPPVVETSPENDSDNSELLSSLSS 324
BLAST of HG10020037 vs. ExPASy Swiss-Prot
Match:
Q39061 (RNA-binding protein CP33, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CP33 PE=2 SV=1)
HSP 1 Score: 296.6 bits (758), Expect = 4.5e-79
Identity = 171/337 (50.74%), Postives = 229/337 (67.95%), Query Frame = 0
Query: 103 MSASSVSMAAAAATSVSSSSPLCKKLFFTQHPNQ------IPSHFSLK---QNPLKLLNL 162
MS++ S A A + + ++SS + H N P F L NPL +L+
Sbjct: 1 MSSAYCSSAVAVSAAATASSAATFNPLLSSHSNSQLFYRFTPKSFKLVANCPNPL-ILHS 60
Query: 163 RIHLPNFYPLSFSSASHLYSAPPAFDGLEVSDSETEYAEIQESDGEEETHEEDEQKVSVS 222
I F+ + + AS A D ++ S E E E + +GEEE EE++Q S
Sbjct: 61 NIRRHRFFCAAETEAS------SADDEIQASVEEEEEVEEEGDEGEEEV-EEEKQTTQAS 120
Query: 223 REAGKLYIGNLPYAMTSSQLTEVFAEAGHVVSVQVIYDKVTDRSRGFAFVTMATLEEAKE 282
E G+LY+GNLPY +TSS+L+++F EAG VV VQ++YDKVTDRSRGF FVTM ++EEAKE
Sbjct: 121 GEEGRLYVGNLPYTITSSELSQIFGEAGTVVDVQIVYDKVTDRSRGFGFVTMGSIEEAKE 180
Query: 283 AIRMFDGSQIGGRTVRVNFPEVPRGGEKEVMGPKIRSSYNKFVDSPHKIYAGNLGWGLTS 342
A++MF+ SQIGGRTV+VNFPEVPRGGE EVM KIR + +VDSPHK+YAGNLGW LTS
Sbjct: 181 AMQMFNSSQIGGRTVKVNFPEVPRGGENEVMRTKIRDNNRSYVDSPHKVYAGNLGWNLTS 240
Query: 343 QSLRDAFENQPGILSAKVIYDRASGKSRGFGFVSFETAEDAESALESMNGVEVEGRPLRL 402
Q L+DAF +QPG+L AKVIY+R +G+SRGFGF+SFE+AE+ +SAL +MNGVEVEGR LRL
Sbjct: 241 QGLKDAFGDQPGVLGAKVIYERNTGRSRGFGFISFESAENVQSALATMNGVEVEGRALRL 300
Query: 403 NIAAGQ-----APTSPAAFTRTENAIDSKELLTSISA 426
N+A+ + +P S E +++S E+L+++SA
Sbjct: 301 NLASEREKPTVSPPSVEEGETEEASLESNEVLSNVSA 329
BLAST of HG10020037 vs. ExPASy Swiss-Prot
Match:
Q08935 (29 kDa ribonucleoprotein A, chloroplastic OS=Nicotiana sylvestris OX=4096 PE=2 SV=1)
HSP 1 Score: 161.4 bits (407), Expect = 2.3e-38
Identity = 95/254 (37.40%), Postives = 152/254 (59.84%), Query Frame = 0
Query: 157 LPNFYPLSFSSASHLYSAPPAFDGLEVSDSETEYA-----EIQESDGEE-ETHEEDEQKV 216
LP P S +++ +S PP+ L +S S + ++ ++ SD ++ E E+ + V
Sbjct: 18 LPLPKPTSQTTSLSFFSLPPSSLNLSLSSSSSCFSSRFVRKVTLSDFDQIEDVEDGDDGV 77
Query: 217 SVSREAG---KLYIGNLPYAMTSSQLTEVFAEAGHVVSVQVIYDKVTDRSRGFAFVTMAT 276
R K+++GNLP++ S+ L E+F AG+V V+VIYDK+T RSRGF FVTM++
Sbjct: 78 EEERNFSPDLKIFVGNLPFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSS 137
Query: 277 LEEAKEAIRMFDGSQIGGRTVRVNFPEVPRGGEKEVMGPKIRSSYNKFVDSPHKIYAGNL 336
EE + A + F+G ++ GR +RVN P E R + DS +++Y GNL
Sbjct: 138 KEEVEAACQQFNGYELDGRALRVNSGPPPEKRENSSFRGGSRGGGS--FDSSNRVYVGNL 197
Query: 337 GWGLTSQSLRDAFENQPGILSAKVIYDRASGKSRGFGFVSFETAEDAESALESMNGVEVE 396
WG+ +L F Q ++ AKV+YDR SG+SRGFGFV++ +AE+ +A+ES++GV++
Sbjct: 198 AWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIESLDGVDLN 257
Query: 397 GRPLRLNIAAGQAP 402
GR +R++ A + P
Sbjct: 258 GRAIRVSPAEARPP 269
BLAST of HG10020037 vs. ExPASy Swiss-Prot
Match:
P49314 (31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana plumbaginifolia OX=4092 PE=2 SV=1)
HSP 1 Score: 160.6 bits (405), Expect = 3.9e-38
Identity = 108/311 (34.73%), Postives = 171/311 (54.98%), Query Frame = 0
Query: 103 MSASSVSMAAAAATSVSSSSPLCKKLFFTQHPNQIPSHFSLKQNPLKLLNLRIHLPNFYP 162
M++SSVS + V+S +P K PN S FSL + L L
Sbjct: 1 MASSSVS--SLQFLFVTSQTPSSLK------PNSTLSFFSLPSSSLNL-----------S 60
Query: 163 LSFSSASHLYSAPPAFDGLEVSDSETEYAEIQESDGEEETHEEDEQKVSVSREAGKLYIG 222
LS SS H S P + +++ ++ E++ ++ + S E KL++G
Sbjct: 61 LSSSSIGHSASIKPFESSFSTRVALSDFDQL-----EDDVEVAEQPRFS---EDLKLFVG 120
Query: 223 NLPYAMTSSQLTEVFAEAGHVVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAIRMFDGSQ 282
NLP+++ S+ L +F AG+V V+VIYDK++ RSRGF FVTM+T EE + A + F+G +
Sbjct: 121 NLPFSVDSAALAGLFERAGNVEIVEVIYDKLSGRSRGFGFVTMSTKEEVEAAEQQFNGYE 180
Query: 283 IGGRTVRVNFPEVP-----------RGGEKEVMGPKIRSSY------NKFVDSPHKIYAG 342
I GR +RVN P RGG G + +S + VDS +++Y G
Sbjct: 181 IDGRAIRVNAGPAPAKRENSSFGGGRGGNSSYGGGRDGNSSFGGARGGRSVDSSNRVYVG 240
Query: 343 NLGWGLTSQSLRDAFENQPGILSAKVIYDRASGKSRGFGFVSFETAEDAESALESMNGVE 397
NL WG+ +L++ F Q ++ AKV+YDR SG+SRGFGFV++ +A++ A++S+NG++
Sbjct: 241 NLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSSAKEVNDAIDSLNGID 284
BLAST of HG10020037 vs. ExPASy Swiss-Prot
Match:
Q08937 (29 kDa ribonucleoprotein B, chloroplastic OS=Nicotiana sylvestris OX=4096 PE=2 SV=1)
HSP 1 Score: 159.1 bits (401), Expect = 1.1e-37
Identity = 108/311 (34.73%), Postives = 164/311 (52.73%), Query Frame = 0
Query: 103 MSASSVSMAAAAATSVSSSSPLCKKLFFTQHPNQIPSHFSLKQNPLKLLNLRIHLPNFYP 162
M++SSVS + + S L PN S FSL P LNL + +
Sbjct: 1 MASSSVSSLQFLFVTPQTPSSL--------KPNSTLSFFSL---PSSSLNLSLSSSSTGL 60
Query: 163 LSFSSASHLYSAPPAFDGLEVSDSETEYAEIQESDGEEETHEEDEQKVSVSREAGKLYIG 222
S +S A G + + + E A E+ ED KL++G
Sbjct: 61 CSIKPFESSFSTRVALSGFDQLEDDVEVA-------EQPRFSEDL----------KLFVG 120
Query: 223 NLPYAMTSSQLTEVFAEAGHVVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAIRMFDGSQ 282
NLP+++ S+ L +F AG+V V+VIYDK+T RSRGF FVTM+T EE + A + F+G +
Sbjct: 121 NLPFSVDSAALAGLFERAGNVEMVEVIYDKLTGRSRGFGFVTMSTKEEVEAAEQQFNGYE 180
Query: 283 IGGRTVRVNFPEVP-----------RGGEKEVMGPKIRSSY------NKFVDSPHKIYAG 342
I GR +RVN P RGG G + +S + VDS +++Y G
Sbjct: 181 IDGRAIRVNAGPAPAKRENSSFGGGRGGNSSYGGGRDGNSSFGGARGGRSVDSSNRVYVG 240
Query: 343 NLGWGLTSQSLRDAFENQPGILSAKVIYDRASGKSRGFGFVSFETAEDAESALESMNGVE 397
NL WG+ +L++ F Q ++ AKV+YDR SG+SRGFGFV++ ++++ A++S+NGV+
Sbjct: 241 NLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSSSKEVNDAIDSLNGVD 283
BLAST of HG10020037 vs. ExPASy TrEMBL
Match:
A0A5A7TK11 (33 kDa ribonucleoprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G001350 PE=4 SV=1)
HSP 1 Score: 575.1 bits (1481), Expect = 2.4e-160
Identity = 300/341 (87.98%), Postives = 315/341 (92.38%), Query Frame = 0
Query: 85 QKSISVIWGFHHFHFLPQMSASSVSMAAAAATSVSSSSPLCKKLFFTQHPNQIPSHFSLK 144
+KSI + W F H H+LPQMSA S+AAAAA + +SSSPL KK FFTQHPNQIPSHFS K
Sbjct: 30 EKSIPIAWEFRHSHYLPQMSA--YSLAAAAAAASASSSPLYKKHFFTQHPNQIPSHFSPK 89
Query: 145 QNPLKLLNLRIHLPNFYPLSFSSASHLYSAPPAFDGLEVSDSETEYAEIQESDGEEETHE 204
N LKLLNL IHLPNFYPLSFSS SH++ APPAFD LE+SD ETEY ++QESDGEE+T E
Sbjct: 90 HNKLKLLNLTIHLPNFYPLSFSSVSHVHCAPPAFDELEISDPETEYGDVQESDGEEQTQE 149
Query: 205 EDEQKVSVSREAGKLYIGNLPYAMTSSQLTEVFAEAGHVVSVQVIYDKVTDRSRGFAFVT 264
EDEQK+SVSREAGKLYIGNLPYAMTSSQL+EVFAEAG VVSVQVIYDKVTDRSRGFAFVT
Sbjct: 150 EDEQKISVSREAGKLYIGNLPYAMTSSQLSEVFAEAGQVVSVQVIYDKVTDRSRGFAFVT 209
Query: 265 MATLEEAKEAIRMFDGSQIGGRTVRVNFPEVPRGGEKEVMGPKIRSSYNKFVDSPHKIYA 324
MATLEEAKEAIRMFDGSQIGGRTVRVNFPEVPRGGEKEVMGPKIRSSYNKFVDSPHKIYA
Sbjct: 210 MATLEEAKEAIRMFDGSQIGGRTVRVNFPEVPRGGEKEVMGPKIRSSYNKFVDSPHKIYA 269
Query: 325 GNLGWGLTSQSLRDAFENQPGILSAKVIYDRASGKSRGFGFVSFETAEDAESALESMNGV 384
GNLGWGLTSQSLRDAFENQPGILSAKVIYDRASGKSRGFGFVSFETAEDAESALESMNGV
Sbjct: 270 GNLGWGLTSQSLRDAFENQPGILSAKVIYDRASGKSRGFGFVSFETAEDAESALESMNGV 329
Query: 385 EVEGRPLRLNIAAGQAPTSPAAFTRTENAIDSKELLTSISA 426
EVEGRPLRLNIAA +APTSPAAF RTEN IDSKELLTSISA
Sbjct: 330 EVEGRPLRLNIAAERAPTSPAAFPRTENTIDSKELLTSISA 368
BLAST of HG10020037 vs. ExPASy TrEMBL
Match:
A0A0A0LBL6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G782700 PE=4 SV=1)
HSP 1 Score: 555.1 bits (1429), Expect = 2.6e-154
Identity = 291/323 (90.09%), Postives = 299/323 (92.57%), Query Frame = 0
Query: 103 MSASSVSMAAAAATSVSSSSPLCKKLFFTQHPNQIPSHFSLKQNPLKLLNLRIHLPNFYP 162
MSA S+SMAAAAA + SSSPL K FFTQHPNQIPSHFS K N LKLLNL H PNFYP
Sbjct: 1 MSAYSLSMAAAAAAAAVSSSPLYNKHFFTQHPNQIPSHFSPKHNQLKLLNLTFHSPNFYP 60
Query: 163 LSFSSASHLYSAPPAFDGLEVSDSETEYAEIQESDGEEETHEEDEQKVSVSREAGKLYIG 222
LSFSS SHL+ APPAFD LE+SD ETEY IQESDGEEET EEDEQKVSVSREAGKLYIG
Sbjct: 61 LSFSSVSHLHCAPPAFDELEISDPETEYGHIQESDGEEETQEEDEQKVSVSREAGKLYIG 120
Query: 223 NLPYAMTSSQLTEVFAEAGHVVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAIRMFDGSQ 282
NLPYAMTSSQL+EVFAEAGHVVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAIRMFDGSQ
Sbjct: 121 NLPYAMTSSQLSEVFAEAGHVVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAIRMFDGSQ 180
Query: 283 IGGRTVRVNFPEVPRGGEKEVMGPKIRSSYNKFVDSPHKIYAGNLGWGLTSQSLRDAFEN 342
IGGRTVRVNFPEVPRGGEKEVMGP+IRSSYNKFVDSPHKIYAGNLGWGLTSQSLRDAFEN
Sbjct: 181 IGGRTVRVNFPEVPRGGEKEVMGPRIRSSYNKFVDSPHKIYAGNLGWGLTSQSLRDAFEN 240
Query: 343 QPGILSAKVIYDRASGKSRGFGFVSFETAEDAESALESMNGVEVEGRPLRLNIAAGQAPT 402
QPGILSAK+IYDRASGKSRGFGFVSFETAEDAESALESMNGVEVEGRPLRLNIAAGQ+P
Sbjct: 241 QPGILSAKIIYDRASGKSRGFGFVSFETAEDAESALESMNGVEVEGRPLRLNIAAGQSPI 300
Query: 403 SPAAFTRTENAIDSKELLTSISA 426
SPAAF RTEN ID KELLTSISA
Sbjct: 301 SPAAFPRTENTIDGKELLTSISA 323
BLAST of HG10020037 vs. ExPASy TrEMBL
Match:
A0A1S3B7N1 (33 kDa ribonucleoprotein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103486688 PE=4 SV=1)
HSP 1 Score: 552.7 bits (1423), Expect = 1.3e-153
Identity = 288/320 (90.00%), Postives = 301/320 (94.06%), Query Frame = 0
Query: 106 SSVSMAAAAATSVSSSSPLCKKLFFTQHPNQIPSHFSLKQNPLKLLNLRIHLPNFYPLSF 165
S+ S+AAAAA + +SSSPL KK FFTQHPNQIPSHFS K N LKLLNL IHLPNFYPLSF
Sbjct: 2 SAYSLAAAAAAASASSSPLYKKHFFTQHPNQIPSHFSPKHNKLKLLNLTIHLPNFYPLSF 61
Query: 166 SSASHLYSAPPAFDGLEVSDSETEYAEIQESDGEEETHEEDEQKVSVSREAGKLYIGNLP 225
SS SH++ APPAFD LE+SD ETEY ++QESDGEE+T EEDEQK+SVSREAGKLYIGNLP
Sbjct: 62 SSVSHIHCAPPAFDELEISDPETEYGDVQESDGEEQTQEEDEQKISVSREAGKLYIGNLP 121
Query: 226 YAMTSSQLTEVFAEAGHVVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAIRMFDGSQIGG 285
YAMTSSQL+EVFAEAG VVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAIRMFDGSQIGG
Sbjct: 122 YAMTSSQLSEVFAEAGQVVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAIRMFDGSQIGG 181
Query: 286 RTVRVNFPEVPRGGEKEVMGPKIRSSYNKFVDSPHKIYAGNLGWGLTSQSLRDAFENQPG 345
RTVRVNFPEVPRGGEKEVMGPKIRSSYNKFVDSPHKIYAGNLGWGLTSQSLRDAFENQPG
Sbjct: 182 RTVRVNFPEVPRGGEKEVMGPKIRSSYNKFVDSPHKIYAGNLGWGLTSQSLRDAFENQPG 241
Query: 346 ILSAKVIYDRASGKSRGFGFVSFETAEDAESALESMNGVEVEGRPLRLNIAAGQAPTSPA 405
ILSAKVIYDRASGKSRGFGFVSFETAEDAESALESMNGVEVEGRPLRLNIAA +APTSPA
Sbjct: 242 ILSAKVIYDRASGKSRGFGFVSFETAEDAESALESMNGVEVEGRPLRLNIAAERAPTSPA 301
Query: 406 AFTRTENAIDSKELLTSISA 426
AF RTEN IDSKELLTSISA
Sbjct: 302 AFPRTENTIDSKELLTSISA 321
BLAST of HG10020037 vs. ExPASy TrEMBL
Match:
A0A5D3DPZ1 (33 kDa ribonucleoprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G004690 PE=4 SV=1)
HSP 1 Score: 552.4 bits (1422), Expect = 1.7e-153
Identity = 288/320 (90.00%), Postives = 301/320 (94.06%), Query Frame = 0
Query: 106 SSVSMAAAAATSVSSSSPLCKKLFFTQHPNQIPSHFSLKQNPLKLLNLRIHLPNFYPLSF 165
S+ S+AAAAA + +SSSPL KK FFTQHPNQIPSHFS K N LKLLNL IHLPNFYPLSF
Sbjct: 2 SAYSLAAAAAAASASSSPLYKKHFFTQHPNQIPSHFSPKHNKLKLLNLTIHLPNFYPLSF 61
Query: 166 SSASHLYSAPPAFDGLEVSDSETEYAEIQESDGEEETHEEDEQKVSVSREAGKLYIGNLP 225
SS SH++ APPAFD LE+SD ETEY ++QESDGEE+T EEDEQK+SVSREAGKLYIGNLP
Sbjct: 62 SSVSHVHCAPPAFDELEISDPETEYGDVQESDGEEQTQEEDEQKISVSREAGKLYIGNLP 121
Query: 226 YAMTSSQLTEVFAEAGHVVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAIRMFDGSQIGG 285
YAMTSSQL+EVFAEAG VVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAIRMFDGSQIGG
Sbjct: 122 YAMTSSQLSEVFAEAGQVVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAIRMFDGSQIGG 181
Query: 286 RTVRVNFPEVPRGGEKEVMGPKIRSSYNKFVDSPHKIYAGNLGWGLTSQSLRDAFENQPG 345
RTVRVNFPEVPRGGEKEVMGPKIRSSYNKFVDSPHKIYAGNLGWGLTSQSLRDAFENQPG
Sbjct: 182 RTVRVNFPEVPRGGEKEVMGPKIRSSYNKFVDSPHKIYAGNLGWGLTSQSLRDAFENQPG 241
Query: 346 ILSAKVIYDRASGKSRGFGFVSFETAEDAESALESMNGVEVEGRPLRLNIAAGQAPTSPA 405
ILSAKVIYDRASGKSRGFGFVSFETAEDAESALESMNGVEVEGRPLRLNIAA +APTSPA
Sbjct: 242 ILSAKVIYDRASGKSRGFGFVSFETAEDAESALESMNGVEVEGRPLRLNIAAERAPTSPA 301
Query: 406 AFTRTENAIDSKELLTSISA 426
AF RTEN IDSKELLTSISA
Sbjct: 302 AFPRTENTIDSKELLTSISA 321
BLAST of HG10020037 vs. ExPASy TrEMBL
Match:
A0A6J1F948 (33 kDa ribonucleoprotein, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111441950 PE=4 SV=1)
HSP 1 Score: 539.7 bits (1389), Expect = 1.1e-149
Identity = 287/327 (87.77%), Postives = 301/327 (92.05%), Query Frame = 0
Query: 103 MSASSVSMAAAAA----TSVSSSSPLCKKLFFTQHPNQIPSHFSLKQNPLKLLNLRIHLP 162
MSASS++MAAAAA +S SSSS CKKLFF QH N+IPSHFS KQ PLKLL LRIHLP
Sbjct: 1 MSASSLTMAAAAASVSSSSSSSSSSPCKKLFFAQHLNRIPSHFSPKQKPLKLLELRIHLP 60
Query: 163 NFYPLSFSSASHLYSAPPAFDGLEVSDSETEYAEIQESDGEEETHEEDEQKVSVSREAGK 222
N YPL+FSSASHLY APPAF+GLEVSD TE AE +ESDG EE+ EEDEQKVS SR+AGK
Sbjct: 61 NIYPLAFSSASHLYCAPPAFEGLEVSDPITEDAETEESDGSEESREEDEQKVSASRDAGK 120
Query: 223 LYIGNLPYAMTSSQLTEVFAEAGHVVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAIRMF 282
LYIGNLPYAMTSSQLTEVFAEAGHVVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAIRMF
Sbjct: 121 LYIGNLPYAMTSSQLTEVFAEAGHVVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAIRMF 180
Query: 283 DGSQIGGRTVRVNFPEVPRGGEKEVMGPKIRSSYNKFVDSPHKIYAGNLGWGLTSQSLRD 342
DGS IGGRTVRVNFPEVPRGGEKEVMGPKIRSSYNKFVDSPHKIYAGNLGWGLTSQSLR+
Sbjct: 181 DGSLIGGRTVRVNFPEVPRGGEKEVMGPKIRSSYNKFVDSPHKIYAGNLGWGLTSQSLRE 240
Query: 343 AFENQPGILSAKVIYDRASGKSRGFGFVSFETAEDAESALESMNGVEVEGRPLRLNIAAG 402
AFENQPGILSAKVIYDR SG+SRGFGFVSFETAEDAESAL+SMNGVEVEGRPLRLN+AA
Sbjct: 241 AFENQPGILSAKVIYDRESGRSRGFGFVSFETAEDAESALDSMNGVEVEGRPLRLNMAAD 300
Query: 403 QAPTSPAAFTRTENAIDSKELLTSISA 426
+APTSPAAFTRTEN IDS ELLTSISA
Sbjct: 301 RAPTSPAAFTRTENTIDSNELLTSISA 327
BLAST of HG10020037 vs. TAIR 10
Match:
AT3G52380.1 (chloroplast RNA-binding protein 33 )
HSP 1 Score: 296.6 bits (758), Expect = 3.2e-80
Identity = 171/337 (50.74%), Postives = 229/337 (67.95%), Query Frame = 0
Query: 103 MSASSVSMAAAAATSVSSSSPLCKKLFFTQHPNQ------IPSHFSLK---QNPLKLLNL 162
MS++ S A A + + ++SS + H N P F L NPL +L+
Sbjct: 1 MSSAYCSSAVAVSAAATASSAATFNPLLSSHSNSQLFYRFTPKSFKLVANCPNPL-ILHS 60
Query: 163 RIHLPNFYPLSFSSASHLYSAPPAFDGLEVSDSETEYAEIQESDGEEETHEEDEQKVSVS 222
I F+ + + AS A D ++ S E E E + +GEEE EE++Q S
Sbjct: 61 NIRRHRFFCAAETEAS------SADDEIQASVEEEEEVEEEGDEGEEEV-EEEKQTTQAS 120
Query: 223 REAGKLYIGNLPYAMTSSQLTEVFAEAGHVVSVQVIYDKVTDRSRGFAFVTMATLEEAKE 282
E G+LY+GNLPY +TSS+L+++F EAG VV VQ++YDKVTDRSRGF FVTM ++EEAKE
Sbjct: 121 GEEGRLYVGNLPYTITSSELSQIFGEAGTVVDVQIVYDKVTDRSRGFGFVTMGSIEEAKE 180
Query: 283 AIRMFDGSQIGGRTVRVNFPEVPRGGEKEVMGPKIRSSYNKFVDSPHKIYAGNLGWGLTS 342
A++MF+ SQIGGRTV+VNFPEVPRGGE EVM KIR + +VDSPHK+YAGNLGW LTS
Sbjct: 181 AMQMFNSSQIGGRTVKVNFPEVPRGGENEVMRTKIRDNNRSYVDSPHKVYAGNLGWNLTS 240
Query: 343 QSLRDAFENQPGILSAKVIYDRASGKSRGFGFVSFETAEDAESALESMNGVEVEGRPLRL 402
Q L+DAF +QPG+L AKVIY+R +G+SRGFGF+SFE+AE+ +SAL +MNGVEVEGR LRL
Sbjct: 241 QGLKDAFGDQPGVLGAKVIYERNTGRSRGFGFISFESAENVQSALATMNGVEVEGRALRL 300
Query: 403 NIAAGQ-----APTSPAAFTRTENAIDSKELLTSISA 426
N+A+ + +P S E +++S E+L+++SA
Sbjct: 301 NLASEREKPTVSPPSVEEGETEEASLESNEVLSNVSA 329
BLAST of HG10020037 vs. TAIR 10
Match:
AT2G37220.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )
HSP 1 Score: 153.3 bits (386), Expect = 4.4e-37
Identity = 92/251 (36.65%), Postives = 147/251 (58.57%), Query Frame = 0
Query: 163 LSFSSASHLYSAPPAFDGLEVSDSETEYAEIQESDGEEETHEEDEQKVSVSREAGKLYIG 222
+SFS A+ S F SE E E DG + EQ S KL++G
Sbjct: 44 VSFSIAAKWNSPASRFARNVAITSEFEV----EEDGFADVAPPKEQSFSADL---KLFVG 103
Query: 223 NLPYAMTSSQLTEVFAEAGHVVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAIRMFDGSQ 282
NLP+ + S+QL ++F AG+V V+VIYDK+T RSRGF FVTM+++ E + A + F+G +
Sbjct: 104 NLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTMSSVSEVEAAAQQFNGYE 163
Query: 283 IGGRTVRVNF-PEVPRGGEKEVMGPKIRSSYNKF-----------VDSPHKIYAGNLGWG 342
+ GR +RVN P P+ + GP RSS+ S +++Y GNL WG
Sbjct: 164 LDGRPLRVNAGPPPPKREDGFSRGP--RSSFGSSGSGYGGGGGSGAGSGNRVYVGNLSWG 223
Query: 343 LTSQSLRDAFENQPGILSAKVIYDRASGKSRGFGFVSFETAEDAESALESMNGVEVEGRP 402
+ +L F Q ++ A+VIYDR SG+S+GFGFV+++++++ ++A++S++G +++GR
Sbjct: 224 VDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQNAIKSLDGADLDGRQ 283
BLAST of HG10020037 vs. TAIR 10
Match:
AT1G60000.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )
HSP 1 Score: 139.8 bits (351), Expect = 5.0e-33
Identity = 74/214 (34.58%), Postives = 132/214 (61.68%), Query Frame = 0
Query: 186 SETEYAEIQESDGEEETHEEDEQKVSVSREAGKLYIGNLPYAMTSSQLTEVFAEAGHVVS 245
SET +++E + ++ + +V+ KLY GNLPY + S+ L ++ + +
Sbjct: 57 SETITVKLEEEEKDDGASAVLDPPAAVNT---KLYFGNLPYNVDSATLAQIIQDFANPEL 116
Query: 246 VQVIYDKVTDRSRGFAFVTMATLEEAKEAIRMFDGSQIGGRTVRVNFPEVPRGGEKEVMG 305
V+V+Y++ T +SRGFAFVTM+ +E+ I DG++ GR ++VNF + P+ ++ +
Sbjct: 117 VEVLYNRDTGQSRGFAFVTMSNVEDCNIIIDNLDGTEYLGRALKVNFADKPKPNKEPL-- 176
Query: 306 PKIRSSYNKFVDSPHKIYAGNLGWGLTSQSLRDAFENQPGILSAKVIYDRASGKSRGFGF 365
+ ++ HK++ GNL W +TS+SL AF ++ A+V++D +G+SRG+GF
Sbjct: 177 ---------YPETEHKLFVGNLSWTVTSESLAGAFRECGDVVGARVVFDGDTGRSRGYGF 236
Query: 366 VSFETAEDAESALESMNGVEVEGRPLRLNIAAGQ 400
V + + + E+ALES++G E+EGR +R+N+A G+
Sbjct: 237 VCYSSKAEMETALESLDGFELEGRAIRVNLAQGK 256
BLAST of HG10020037 vs. TAIR 10
Match:
AT3G52150.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )
HSP 1 Score: 135.6 bits (340), Expect = 9.5e-32
Identity = 89/268 (33.21%), Postives = 143/268 (53.36%), Query Frame = 0
Query: 129 FFTQHPNQIPSHFSLKQNPLKLLNLRIHLPNFYPLSFSSASHLYSAPPAFDGLEVSDSET 188
F T + P+ FS + L+ R+++ FSS P+ G S T
Sbjct: 4 FLTNVVSIKPTIFSFQSESFTPLHTRVNV-------FSSKPF-----PSLAGTFSRSSRT 63
Query: 189 EYAEIQESDGEEETHEEDEQKVSVSREAGKLYIGNLPYAMTSSQLTEVFAEAGHVVSVQV 248
+ ++ EE+ D S A ++YIGN+P +T+ QLT++ E G V VQV
Sbjct: 64 RFIPYAVTETEEKPAALDPS----SEAARRVYIGNIPRTVTNEQLTKLVEEHGAVEKVQV 123
Query: 249 IYDKVTDRSRGFAFVTMATLEEAKEAIRMFDGSQIGGRTVRVNFPEVPRGGEKEVMGPKI 308
+YDK + RSR F F TM ++E+A + +G+ + GR ++VN E P ++ +
Sbjct: 124 MYDKYSGRSRRFGFATMKSVEDANAVVEKLNGNTVEGREIKVNITEKPIASSPDL--SVL 183
Query: 309 RSSYNKFVDSPHKIYAGNLGWGLTSQSLRDAFENQPGILSAKVIYDRASGKSRGFGFVSF 368
+S + FVDSP+K+Y GNL +T + L + F + ++SAKV + KS GFGFV+F
Sbjct: 184 QSEDSAFVDSPYKVYVGNLAKTVTKEMLENLFSEKGKVVSAKVSRVPGTSKSTGFGFVTF 243
Query: 369 ETAEDAESALESMNGVEVEGRPLRLNIA 397
+ ED E+A+ ++N +EG+ +R+N A
Sbjct: 244 SSEEDVEAAIVALNNSLLEGQKIRVNKA 253
BLAST of HG10020037 vs. TAIR 10
Match:
AT3G52150.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )
HSP 1 Score: 135.6 bits (340), Expect = 9.5e-32
Identity = 89/268 (33.21%), Postives = 143/268 (53.36%), Query Frame = 0
Query: 129 FFTQHPNQIPSHFSLKQNPLKLLNLRIHLPNFYPLSFSSASHLYSAPPAFDGLEVSDSET 188
F T + P+ FS + L+ R+++ FSS P+ G S T
Sbjct: 4 FLTNVVSIKPTIFSFQSESFTPLHTRVNV-------FSSKPF-----PSLAGTFSRSSRT 63
Query: 189 EYAEIQESDGEEETHEEDEQKVSVSREAGKLYIGNLPYAMTSSQLTEVFAEAGHVVSVQV 248
+ ++ EE+ D S A ++YIGN+P +T+ QLT++ E G V VQV
Sbjct: 64 RFIPYAVTETEEKPAALDPS----SEAARRVYIGNIPRTVTNEQLTKLVEEHGAVEKVQV 123
Query: 249 IYDKVTDRSRGFAFVTMATLEEAKEAIRMFDGSQIGGRTVRVNFPEVPRGGEKEVMGPKI 308
+YDK + RSR F F TM ++E+A + +G+ + GR ++VN E P ++ +
Sbjct: 124 MYDKYSGRSRRFGFATMKSVEDANAVVEKLNGNTVEGREIKVNITEKPIASSPDL--SVL 183
Query: 309 RSSYNKFVDSPHKIYAGNLGWGLTSQSLRDAFENQPGILSAKVIYDRASGKSRGFGFVSF 368
+S + FVDSP+K+Y GNL +T + L + F + ++SAKV + KS GFGFV+F
Sbjct: 184 QSEDSAFVDSPYKVYVGNLAKTVTKEMLENLFSEKGKVVSAKVSRVPGTSKSTGFGFVTF 243
Query: 369 ETAEDAESALESMNGVEVEGRPLRLNIA 397
+ ED E+A+ ++N +EG+ +R+N A
Sbjct: 244 SSEEDVEAAIVALNNSLLEGQKIRVNKA 253
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038904039.1 | 2.4e-162 | 95.05 | 33 kDa ribonucleoprotein, chloroplastic [Benincasa hispida] | [more] |
KAA0043803.1 | 5.0e-160 | 87.98 | 33 kDa ribonucleoprotein [Cucumis melo var. makuwa] | [more] |
XP_004136521.3 | 9.2e-154 | 90.09 | 33 kDa ribonucleoprotein, chloroplastic [Cucumis sativus] >KAE8651116.1 hypothet... | [more] |
XP_008442930.1 | 2.7e-153 | 90.00 | PREDICTED: 33 kDa ribonucleoprotein, chloroplastic [Cucumis melo] | [more] |
TYK25330.1 | 3.5e-153 | 90.00 | 33 kDa ribonucleoprotein [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |
P19684 | 1.1e-85 | 54.85 | 33 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris OX=4096 PE=1 SV=... | [more] |
Q39061 | 4.5e-79 | 50.74 | RNA-binding protein CP33, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CP33 ... | [more] |
Q08935 | 2.3e-38 | 37.40 | 29 kDa ribonucleoprotein A, chloroplastic OS=Nicotiana sylvestris OX=4096 PE=2 S... | [more] |
P49314 | 3.9e-38 | 34.73 | 31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana plumbaginifolia OX=4092 PE=... | [more] |
Q08937 | 1.1e-37 | 34.73 | 29 kDa ribonucleoprotein B, chloroplastic OS=Nicotiana sylvestris OX=4096 PE=2 S... | [more] |
Match Name | E-value | Identity | Description | |
A0A5A7TK11 | 2.4e-160 | 87.98 | 33 kDa ribonucleoprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol... | [more] |
A0A0A0LBL6 | 2.6e-154 | 90.09 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G782700 PE=4 SV=1 | [more] |
A0A1S3B7N1 | 1.3e-153 | 90.00 | 33 kDa ribonucleoprotein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103486688 ... | [more] |
A0A5D3DPZ1 | 1.7e-153 | 90.00 | 33 kDa ribonucleoprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol... | [more] |
A0A6J1F948 | 1.1e-149 | 87.77 | 33 kDa ribonucleoprotein, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC1114... | [more] |