HG10019957 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10019957
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	UBP1-associated protein 2C-like
Location	Chr04: 27304815 .. 27311137 (-)
RNA-Seq Expression	HG10019957
Synteny	HG10019957

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGATTTGAAGAAGCGGAAGCTGGAGGAGACCGCCGGCAATGGTGAATTTTCTTCCGTCGAACATTTGCGGTCTCTGCTCGAACCGCTTCCCAAGCCACAACTCGTCGATCTCCTTGCCAAACTGTGCGTCTCTTCTCCCTTCTTTATTTAACTACAATTTCATTTGCTCTTCGTTCGTCTTCTTATATGTTTTCGTTAATATTCGTAGCGTTTTAGTTTCTTAGTTCTACTTCTTTTTCGCATCTGACCTTGTCATTCTGTTTACTGGGAAATACGTTGTTGTATTGTATGAGATATGGGATTTAAGATAATTTGGTAATCAGCCTTATCTCATTTATGCCAGTGTTGGGATGATCCTAAGGGTTTTGGGTTCTTAGTTTTCGTTGTAGCTGAATTTTGGAATCTTTTTGGTTCGTAGATGTATGAGGCATTCCCACTGTAAACCACCCGTAATCATTTAGGCCCCTTTGATAATCACTTGGTTTTTAGTTTTTAGTTTTTGAAAATTAAGCCTATCAACACTCTTCTCGCCTCTAAATTTCTTGCTTTGTTTACTTTTTACAAAGGTAAATTTTGAAAACTAAAAAAAATAGTTTTTAACTTGTTTTTTTGTTTTTGGAATTTGAGTAAGAGTTTAATTTGTATTAAGAAAGTTGCATCTCCAAACATTCCAAGTCTTTACTATTAGACCCCAAATGGGTGTTTTTTTAAAGAATTAGTTTGGAAGTTGGTCCTCCAACAATATCGTCAGTGAAGCTAGCCTTAATTCTTGAATCCTCATTTTCTCTAAGAAATAGTTTCTTTGTTCCTTATAGGCAGGCACATTTTTGATATACTACGAACCCATCTTGCACGTGAGGATGATGTGCTTTGTTTTGTTAAAGTGTGTTCCATTGTAGATTTTTTTCATTTAAATACTATTCAAATTTAATTCAGCAGAAGCAATTTATTAAAGAACTGTCAATTAATTTATTAAAAAGAGTGACCACAACTCTCAAATACTCATATCTGGTGTGGAACTTTAGTTTTTATCGGAATTATTATCTTATCCTCCACATGAGTATTTGGAAAAACATAATGAGTACAATAACAGTACGGCAGTTCAGTACTTGACAAAGAATAAGCTCCTTCACCATAAAAACTCCAACCTCTCTTTCATCCCATGATATTCACATCCCTTAGGATTTGCCAATCTCTTCATTCTCTTTGTACCAGTTTCCTTTGAGTCTATTATAAGTTCACTACTCCCATATCCAGTTTACTATATACGTGTGTGTATGCACACACAGATTTTTCAATCATAGCCACCTATTTTACTTCCGTGACAAGGTTGATCAGTTTCCTAAAGCCACTTGAGTTCCTTGTGCTTTTTGTTCTCCTTTTCCCTCCATTATTTAAAATGGATGTTATTCGACCATTACACATAATGTTTTTTTTTTTTTTTGGTCTCAAGCTTCCTGCCTTCTTCTTGTGTTGGAAACTTCGAAGTGTGACTAGAATGGGAGATGTTGCCATTGGGTTGTGAGGAATTATTGCTTTGGGCTTATGACATTGCTTAGGAATCAACTGTAGTATTAATCACCATCAAATATTTTATGTCCTCCTTTCCATTTTCTTCAAATAAATTATGGAAAACATCTGCCAAATTATTGTCGTCTTTGCCCTTTCTTCCTTTGAATTTGTACATGCACATCTTATCTTCTCTTGGCTGCTCCTTTGAAGTTTCATTACCTCTGTATGCTAGGCCATGAAATACCCAAGGGCGTTGTCTAACGTTCCTCTAAGGTAGTTATCATAGGTTTTCCCTAAGATATTTTAGCTTCCAATGGGTGTGGATGCATGGAATTCTCCCGACCAAGAATGAAGGGTGAGAGACTATCACTTACATTGAATACATGTCCTATTGTCCTCTATGTTTCTACCGTGCATGCCTCCAAATTATTTGACGAACTGCTAGTCTGTCTTGCACTCTAAATATTGATTTCCAATCAACGTCAAATACTCTTCATTTCATAAGGACAAAAGAATGATCCCCCAACAGAGAGAAAACCCCACTTCTCAAATTGGAAAAAGAGAATCACCCTCGGATTGACCCAAAAGAAGAAGAAAAAAAAACCCTCCAATGAAGACCATCTTTCACATTGACAATTTATTGACCACTTATTTTTCTTACATTTTATAAAAGCTTTGCCCATACAATCCTCGTTAAAGTTTCTTTTCATTGGTTTCCATATTGCAGCTAGTTGTTATGAAAACACAGCTTGCTTGAAACAATGATTTGCTTACACTCTACAATATTGCACCCCTCCTTATTTTATTTGACATGTCTACCTATATCTTGAATCCTTTTACCCTTTTGTGCAATCCCACCACACAAGGGATAAAAGGTTTTCTTATCCCCTTGGTGGTGGGTGGTCCTGTTCATCCTCTTCCCCTTGTTTCTAAAAACTTAACATGGATTCCCTTCTTGCATCTTTTCAAAATTCTTTGAACCCCACAAGTTCCATCGTTCCCCTTGTTTGCTTTAGGAACTTAGATTGAACGATGATAATTCAAAACACCAAGGTTTTCCTATGTTCCTCCAACTCCACCTCACCACATAATCTATCAAGATTTATGTCTAAGCTTTGACTCTCCAATTGCTAGAACCTATTGGAGCTCCCATCCCTAAACATTATTCAACCAACATCTAGAGAGAAGACAAAGTGAAAGAATGGGTTCAAGCATGGTAGTCACCTCTATGGGGTTTAATATCTTATGAGTTTCCTTGGCAACCAAATGTAGTAGGATCATATTGTTGTCTTGTGAGAATAGTTGAACTATGTGCAAGATGAGCCAGACACTTACAGGTAAGAAGAAAAGAACTTTAGCGAACCAATTGAAAGAACAATCAGTAAGTTTTAGCAATAATATTTTTGTTCTCACAATGCAAGTCAAACTTAAACTTGTCCACAACCTTTTCATAAAAAAAACCATTTAAAGTCAATGTCAGATCTCTAAAATTAATTAAAATGGATTTAAAACAAATAGTGCAAGTAATTTCATAATCAATGAAATTGTTTCTTATGGAAAAACAAATTTAGCCAACTTTACTTTAGCATAGCTCAGCTGGTGAAGACATTATACTCAATCGGAAGGTCAAAAGTTCAAATTCCCACCCCTCATCTTAAAAAGGGATTTAATACCTGCAAATTCAACAAATAAATATTTCATAAAAATTTATTAGAATTCAAGTCTACACCAAGCAATATATATATTTATAGAAAACTTATCTTTAATAACTTTCTTCTGACAAAAGAGGTTTCAAACCAAATTCAGATTGGTCTTAGAGTACGTATCTAATACAATACTTTAAGGAGAAGACAAATTTATAAGTTCAATAATTATAAAAAAAATGAATTTAAACTCAAAACAAATTTGTTCGAAAAAAATTCATGTCTTTATAGTTCTTAAATAAAAATTTTCCTTTGAGAGTAACTTCCATTGCTAAAACTATGGTAAGAACTTGTTCCAAAAAAATAAAATTATGGTAAGAATGAATTTTTGTGGGTATTACAGAATGGAAATCACGGGTGTTGCTTCATCAATTGTATGCTGTATGCTGTGTGATTGACATGGTGAATGTGTGTTTATTTGCGTTGCATGTTGAGGCATAAAGAGGGTCCCAGTATCCTTCCATTGCAGAAGAAATAAAAAGTGTTGCCAGTGCAGATCCTGTCAATCGAAAGCTTTTTGTTCGTGGCTTGGCTTGGAATACCACTTCAGAAACATTGTGTGCTGTGAGTGCAGTTGGTTGTTGCTTGTGTTTTGCCTGTCATGTTTGTGATTGTTCTTTAGACTCTATATGTTTCTAGTCCTGGGACGTTAAATCTTGGAATCACTTTCTTTTTTAATAATTTTTATTCTCTCGGGCTTCTGTCTCCTACCAAAAACAGTGTTCACTTGGTTTTTTCTTAATAAAGTTGTTATAATTATATCATGTTCAGGCATTTAGCATGCATGGGGAAATTGAAGAAGGAGCCGTTATCTATGACAAAGCAACGGGAAAGTCCCGTGGATATGGTTTCATAACTTACAAGAACATGGAGTCAACTAAAGCTGCTTTAAAAGCACCTAGCAAAATTATTGAGGTAAGCACTAATCCCCTTCCAAATGTTGTGGAAATAGTTTCCATTTGATAAGATAATTTTGTGGAGTTAAATGTGTAAGAATGGTTGGGATGGAATGAAGCAGTTGGCATATCTTATTTGGGTTATGAATATAAGAAATCATAAATCCTCTTCTTTTTATAGAGCATCCTGTATTCTCTTGATAGAGTTTCATTTTGATGGATGCAGTTCTTCCCTTTTTAATTTTCAGTAGGATCTTGACGTTTTCAATAATTTTTAATAGTATTTGGTTATTGTCAATGGAAGTTTGGTTTATCATCAATTTTTAAACAATATTTGGTCTCGTAGTCACCAAGGGGTAGTCCCTTTGGTTGAGGCCCACAGTCTCTCTTTCTCTCTCTATTTTTCTTTTTGAGTTCAACAAATGTGGGGTTAGGATCGAACCATCGACCTAGGATGTATGGTAATTGGTGTTCTTATTCACTGAGCTATGCTTGGATTAGCAAGGCTTTCAGACTCTCAATAACAGCTACCCGTGTATGCGAATCTTCGGGTGAGTTATAATAAGGAAAAATCCTTTACATCTCCAAAGTCTAGGCCTTGGCGCAGGTGCAGACCCCAACTTTTAGCAAAAAATTATAGCTATTTTGGCTTATGGACAAGTATTATTTTTGGTTTTTTATCATTATATAGAATCTAACTTTATAAAGATTGAAACTTAATCAACACTCCTATATATGAGTGTATATCATTTTTTGACAATTAATTCAGAACTTGAATAAATTTATGCCTTTAAAAAACAGATACTGAGGGTAGTTGATTGATAGCCCATATGTGACTGCAAGTAAGGATAGATAACATGAACTTTTAATAAACTCAGCCATCTCTTCGTTCCACCATATAATAGCTGGTGGTTTTCTATGATATTTCCAAGAAAATTCAAATATTTGTATTTGATTAATGCTTCTTAATTTTAGGGTCGCATGGCTGTCTGTAATCTGGCTTGTGAGGGTCTAAGTGGATCAAGTACAACGCCAGATTTAGCACAGAGGAAGCTTTACATTGGTGGTTTATCACCAGATATTACAAGTGAAATATTGCTGAATTTCTTCGGAAGGTATGGTGATATAGAAGAAGGTTCGGTTGCCTATGATAAGGATACAAATGAATCACGGTTAGTGACATTCTTTTTGCATTTGGAATTTGCTTTCTCCGTTGATGTGTATAATTTTTTATCTTATTGGACTTAGTCACGCTGTACCTGTAAAACAATTTCCATTTTTTTTGTGTGTAGAGGATTTGGATTTGTTACGTATACCACAGTAGAGGCTGCAAAGAAGGCAATAGATGATCCAGACAAGACCTTTGGGGTGAGTGAGTAATGAGCCTTGTAATAGCTTTTTTGCAACAGATGGTTTAATTTTAGTACAGAAGATTCCAATATTTTAATGATTAGATATGCGGTTTATTTTTCAAGTGAAAAGAAAAAACGGGAAAAGTCCAGAATTGAAAGTTAGAACTATTTGATTTTTGAACGGGTAGAAAAAAATTTGTTTTAGTTCAACTTTTCTGCCGAGTATGTATGAAGCCTTACATGACTTTTCATTAAGCACAAGCGATCTTTTAGAGTAAGTGTGGAATTATGGAAGCAGTTTTATCTTTATTTTTGGAAGGAGGAAAGGGTAAGAAACCAAAAACAATATAGTAGAGGGATAAACAAAAGCTTTTTGTAAATTTATAGAAATGAAGAATGTTCTCCCCAGCAAGACCCAAACTATACCGGTTTAGTGCAACATGCGAAAATATTGCAAATGATATTTAACCTTTGATGAAAATGATAATATGTTGATGTGGTGAGTGGTTGCAGGGAAGGAACATCATTGTGAAGCTCGCAGATTCACACAGGAACAAGATGATGCAGGCACAAGTCTCCCCAGCTATTCCTTCTATGCCATACCCAGTAGCCGCTGGATATCCTCAACCTGGGAAACCTCATGGCGGTGTTGCCCCTGTTGGCTATGCTTATCCCCAAGCTCTTGCATCATATCCTGCTTCGTATCCTAGTCCTACGACAGCACATGCTTCATATGCGAGCCAACCCCAAATGCCATATCCCCATCAAGTGATTGGAAAGAAAGATGCTCCTGGACTTCACCCGATCACACCTGCTGGAATGGGAGGTTATCCATATTATATGGCAAAACAATAG

mRNA sequence

ATGGAGGATTTGAAGAAGCGGAAGCTGGAGGAGACCGCCGGCAATGGTGAATTTTCTTCCGTCGAACATTTGCGGTCTCTGCTCGAACCGCTTCCCAAGCCACAACTCGTCGATCTCCTTGCCAAACTAGGGTCCCAGTATCCTTCCATTGCAGAAGAAATAAAAAGTGTTGCCAGTGCAGATCCTGTCAATCGAAAGCTTTTTGTTCGTGGCTTGGCTTGGAATACCACTTCAGAAACATTGTGTGCTGCATTTAGCATGCATGGGGAAATTGAAGAAGGAGCCGTTATCTATGACAAAGCAACGGGAAAGTCCCGTGGATATGGTTTCATAACTTACAAGAACATGGAGTCAACTAAAGCTGCTTTAAAAGCACCTAGCAAAATTATTGAGGGTCGCATGGCTGTCTGTAATCTGGCTTGTGAGGGTCTAAGTGGATCAAGTACAACGCCAGATTTAGCACAGAGGAAGCTTTACATTGGTGGTTTATCACCAGATATTACAAGTGAAATATTGCTGAATTTCTTCGGAAGGTATGGTGATATAGAAGAAGGTTCGGTTGCCTATGATAAGGATACAAATGAATCACGAGGATTTGGATTTGTTACGTATACCACAGTAGAGGCTGCAAAGAAGGCAATAGATGATCCAGACAAGACCTTTGGGGGAAGGAACATCATTGTGAAGCTCGCAGATTCACACAGGAACAAGATGATGCAGGCACAAGTCTCCCCAGCTATTCCTTCTATGCCATACCCAGTAGCCGCTGGATATCCTCAACCTGGGAAACCTCATGGCGGTGTTGCCCCTGTTGGCTATGCTTATCCCCAAGCTCTTGCATCATATCCTGCTTCGTATCCTAGTCCTACGACAGCACATGCTTCATATGCGAGCCAACCCCAAATGCCATATCCCCATCAAGTGATTGGAAAGAAAGATGCTCCTGGACTTCACCCGATCACACCTGCTGGAATGGGAGGTTATCCATATTATATGGCAAAACAATAG

Coding sequence (CDS)

ATGGAGGATTTGAAGAAGCGGAAGCTGGAGGAGACCGCCGGCAATGGTGAATTTTCTTCCGTCGAACATTTGCGGTCTCTGCTCGAACCGCTTCCCAAGCCACAACTCGTCGATCTCCTTGCCAAACTAGGGTCCCAGTATCCTTCCATTGCAGAAGAAATAAAAAGTGTTGCCAGTGCAGATCCTGTCAATCGAAAGCTTTTTGTTCGTGGCTTGGCTTGGAATACCACTTCAGAAACATTGTGTGCTGCATTTAGCATGCATGGGGAAATTGAAGAAGGAGCCGTTATCTATGACAAAGCAACGGGAAAGTCCCGTGGATATGGTTTCATAACTTACAAGAACATGGAGTCAACTAAAGCTGCTTTAAAAGCACCTAGCAAAATTATTGAGGGTCGCATGGCTGTCTGTAATCTGGCTTGTGAGGGTCTAAGTGGATCAAGTACAACGCCAGATTTAGCACAGAGGAAGCTTTACATTGGTGGTTTATCACCAGATATTACAAGTGAAATATTGCTGAATTTCTTCGGAAGGTATGGTGATATAGAAGAAGGTTCGGTTGCCTATGATAAGGATACAAATGAATCACGAGGATTTGGATTTGTTACGTATACCACAGTAGAGGCTGCAAAGAAGGCAATAGATGATCCAGACAAGACCTTTGGGGGAAGGAACATCATTGTGAAGCTCGCAGATTCACACAGGAACAAGATGATGCAGGCACAAGTCTCCCCAGCTATTCCTTCTATGCCATACCCAGTAGCCGCTGGATATCCTCAACCTGGGAAACCTCATGGCGGTGTTGCCCCTGTTGGCTATGCTTATCCCCAAGCTCTTGCATCATATCCTGCTTCGTATCCTAGTCCTACGACAGCACATGCTTCATATGCGAGCCAACCCCAAATGCCATATCCCCATCAAGTGATTGGAAAGAAAGATGCTCCTGGACTTCACCCGATCACACCTGCTGGAATGGGAGGTTATCCATATTATATGGCAAAACAATAG

Protein sequence

MEDLKKRKLEETAGNGEFSSVEHLRSLLEPLPKPQLVDLLAKLGSQYPSIAEEIKSVASADPVNRKLFVRGLAWNTTSETLCAAFSMHGEIEEGAVIYDKATGKSRGYGFITYKNMESTKAALKAPSKIIEGRMAVCNLACEGLSGSSTTPDLAQRKLYIGGLSPDITSEILLNFFGRYGDIEEGSVAYDKDTNESRGFGFVTYTTVEAAKKAIDDPDKTFGGRNIIVKLADSHRNKMMQAQVSPAIPSMPYPVAAGYPQPGKPHGGVAPVGYAYPQALASYPASYPSPTTAHASYASQPQMPYPHQVIGKKDAPGLHPITPAGMGGYPYYMAKQ

Homology

[Close]

BLAST of HG10019957 vs. NCBI nr
Match: XP_008443071.1 (PREDICTED: UBP1-associated protein 2C-like [Cucumis melo] >KAA0043722.1 UBP1-associated protein 2C-like [Cucumis melo var. makuwa] >TYK25411.1 UBP1-associated protein 2C-like [Cucumis melo var. makuwa])

HSP 1 Score: 658.3 bits (1697), Expect = 3.6e-185
Identity = 326/335 (97.31%), Postives = 332/335 (99.10%), Query Frame = 0


Query: 1   MEDLKKRKLEETAGNGEFSSVEHLRSLLEPLPKPQLVDLLAKLGSQYPSIAEEIKSVASA 60
           MEDLKKRKLEET GNGEFSSVEHLRSLLEPLPKPQLVDLLA+LGSQYPSIAEEIKSVASA
Sbjct: 1   MEDLKKRKLEETVGNGEFSSVEHLRSLLEPLPKPQLVDLLARLGSQYPSIAEEIKSVASA 60

Query: 61  DPVNRKLFVRGLAWNTTSETLCAAFSMHGEIEEGAVIYDKATGKSRGYGFITYKNMESTK 120
           DPVNRKLFVRGLAWNTTSETLCAAFS+HGEIEEGAVIYDKATGKSRGYGFITYK+MESTK
Sbjct: 61  DPVNRKLFVRGLAWNTTSETLCAAFSVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTK 120

Query: 121 AALKAPSKIIEGRMAVCNLACEGLSGSSTTPDLAQRKLYIGGLSPDITSEILLNFFGRYG 180
           AALKAPSKIIEGRMAVCNLACEGLSGSSTTPDLAQRKLYIGGLSPDITSE+LLNFFGRYG
Sbjct: 121 AALKAPSKIIEGRMAVCNLACEGLSGSSTTPDLAQRKLYIGGLSPDITSEVLLNFFGRYG 180

Query: 181 DIEEGSVAYDKDTNESRGFGFVTYTTVEAAKKAIDDPDKTFGGRNIIVKLADSHRNKMMQ 240
           DIEEGSVAYDKDTNESRGFGFVTYTTVEAAKKAIDDPDKTFGGRNIIVKLADSHRNKMMQ
Sbjct: 181 DIEEGSVAYDKDTNESRGFGFVTYTTVEAAKKAIDDPDKTFGGRNIIVKLADSHRNKMMQ 240

Query: 241 AQVSPAIPSMPYPVAAGYPQPGKPHGGVAPVGYAYPQALASYPASYPSPTTAHASYASQP 300
           AQVSPAIPSMPYPVAAGYPQPGKPHGGVAPVGYAYPQAL SYPASYPSPTTAHASYASQP
Sbjct: 241 AQVSPAIPSMPYPVAAGYPQPGKPHGGVAPVGYAYPQALGSYPASYPSPTTAHASYASQP 300

Query: 301 QMPYPHQVIGKKDAPGLHPITPAGMGGYPYYMAKQ 336
           QMPYPHQ+IGKKDA GLHP+TPAGMGGYPYYMAKQ
Sbjct: 301 QMPYPHQLIGKKDATGLHPVTPAGMGGYPYYMAKQ 335

[Close]

BLAST of HG10019957 vs. NCBI nr
Match: XP_004136575.1 (UBP1-associated protein 2C [Cucumis sativus] >KGN59314.1 hypothetical protein Csa_002522 [Cucumis sativus])

HSP 1 Score: 653.7 bits (1685), Expect = 8.8e-184
Identity = 324/335 (96.72%), Postives = 330/335 (98.51%), Query Frame = 0


Query: 1   MEDLKKRKLEETAGNGEFSSVEHLRSLLEPLPKPQLVDLLAKLGSQYPSIAEEIKSVASA 60
           MEDLKKRKLEET GN EFSS+EHLR+LLEPLPKPQLVDLLA+LGSQYPSIAEEIKSVASA
Sbjct: 1   MEDLKKRKLEETVGNAEFSSLEHLRTLLEPLPKPQLVDLLARLGSQYPSIAEEIKSVASA 60

Query: 61  DPVNRKLFVRGLAWNTTSETLCAAFSMHGEIEEGAVIYDKATGKSRGYGFITYKNMESTK 120
           DPVNRKLFVRGLAWNTTSETLCAAFS+HGEIEEGAVIYDKATGKSRGYGFITYK+MESTK
Sbjct: 61  DPVNRKLFVRGLAWNTTSETLCAAFSVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTK 120

Query: 121 AALKAPSKIIEGRMAVCNLACEGLSGSSTTPDLAQRKLYIGGLSPDITSEILLNFFGRYG 180
           AALKAPSKIIEGRMAVCNLACEGLSGSSTTPDLAQRKLYIGGLSPDITSE+LLNFFGRYG
Sbjct: 121 AALKAPSKIIEGRMAVCNLACEGLSGSSTTPDLAQRKLYIGGLSPDITSEVLLNFFGRYG 180

Query: 181 DIEEGSVAYDKDTNESRGFGFVTYTTVEAAKKAIDDPDKTFGGRNIIVKLADSHRNKMMQ 240
           DIEEGSVAYDKDTNESRGFGFVTYTT EAAKKAIDDPDKTFGGRNIIVKLADSHRNKMMQ
Sbjct: 181 DIEEGSVAYDKDTNESRGFGFVTYTTAEAAKKAIDDPDKTFGGRNIIVKLADSHRNKMMQ 240

Query: 241 AQVSPAIPSMPYPVAAGYPQPGKPHGGVAPVGYAYPQALASYPASYPSPTTAHASYASQP 300
           AQVSPAIPSMPYPVAAGYPQPGKPHGGVAPVGYAYPQAL SYPASYPSPTTAHASYASQP
Sbjct: 241 AQVSPAIPSMPYPVAAGYPQPGKPHGGVAPVGYAYPQALGSYPASYPSPTTAHASYASQP 300

Query: 301 QMPYPHQVIGKKDAPGLHPITPAGMGGYPYYMAKQ 336
           QMPYPHQVIGKKDA GLHPITPAGMGGYPYYMAKQ
Sbjct: 301 QMPYPHQVIGKKDATGLHPITPAGMGGYPYYMAKQ 335

[Close]

BLAST of HG10019957 vs. NCBI nr
Match: XP_038904904.1 (UBP1-associated protein 2C-like [Benincasa hispida])

HSP 1 Score: 637.1 bits (1642), Expect = 8.5e-179
Identity = 320/336 (95.24%), Postives = 326/336 (97.02%), Query Frame = 0


Query: 1   MEDLKKRKLEETAGNGEFSSVEHLRSLLEPLPKPQLVDLLAKLGSQYPSIAEEIKSVASA 60
           MEDLKKRKLEET GNGEFSSVEHLRSLLEPLPKPQLVDLLAKLGSQYPSIAEEIKSVASA
Sbjct: 1   MEDLKKRKLEETIGNGEFSSVEHLRSLLEPLPKPQLVDLLAKLGSQYPSIAEEIKSVASA 60

Query: 61  DPVNRKLFVRGLAWNTTSETLCAAFSMHGEIEEGAVIYDKATGKSRGYGFITYKNMESTK 120
           DPVNRKLFVRGLAWNTTSETLCAAFS+HGEIEEGAVIYDKATGKSRGYGFITYK+M+STK
Sbjct: 61  DPVNRKLFVRGLAWNTTSETLCAAFSVHGEIEEGAVIYDKATGKSRGYGFITYKHMDSTK 120

Query: 121 AALKAPSKIIEGRMAVCNLACEGLSGSSTTPDLAQRKLYIGGLSPDITSEILLNFFGRYG 180
           AALKAPSKIIEGRMA+CNLACEGLSGSSTTPDLAQRKLYIGGLSPDITSEILLNFFGRYG
Sbjct: 121 AALKAPSKIIEGRMAICNLACEGLSGSSTTPDLAQRKLYIGGLSPDITSEILLNFFGRYG 180

Query: 181 DIEEGSVAYDKDTNESRGFGFVTYTTVEAAKKAIDDPDKTFGGRNIIVKLADSHRNKMMQ 240
           DIEEGSVAYDKDTNESRGFGFVTYTTVEAAKKAIDDPDKTFGGRNIIVKLADSHRNKMMQ
Sbjct: 181 DIEEGSVAYDKDTNESRGFGFVTYTTVEAAKKAIDDPDKTFGGRNIIVKLADSHRNKMMQ 240

Query: 241 AQVSPAIPSMPYPVAAGY-PQPGKPHGGVAPVGYAYPQALASYPASYPSPTTAHASYASQ 300
           AQVS AIPSMPYPVAAGY PQPGKPHGGV P+GYAYPQALASYPASYPSPT AH SY SQ
Sbjct: 241 AQVSSAIPSMPYPVAAGYHPQPGKPHGGVGPLGYAYPQALASYPASYPSPTAAHTSYGSQ 300

Query: 301 PQMPYPHQVIGKKDAPGLHPITPAGMGGYPYYMAKQ 336
            Q+PYPHQVIGKKDA GLHPITPAGMGGYPY MAKQ
Sbjct: 301 LQLPYPHQVIGKKDAAGLHPITPAGMGGYPYCMAKQ 336

[Close]

BLAST of HG10019957 vs. NCBI nr
Match: XP_038906210.1 (UBP1-associated protein 2C-like [Benincasa hispida])

HSP 1 Score: 633.3 bits (1632), Expect = 1.2e-177
Identity = 318/335 (94.93%), Postives = 324/335 (96.72%), Query Frame = 0


Query: 1   MEDLKKRKLEETAGNGEFSSVEHLRSLLEPLPKPQLVDLLAKLGSQYPSIAEEIKSVASA 60
           MEDLKKR   +   NGEFSSV+HLRSLLEPLPKPQLVDLLAKLGSQYPSIAEEIKSVASA
Sbjct: 1   MEDLKKRSWRKPVRNGEFSSVQHLRSLLEPLPKPQLVDLLAKLGSQYPSIAEEIKSVASA 60

Query: 61  DPVNRKLFVRGLAWNTTSETLCAAFSMHGEIEEGAVIYDKATGKSRGYGFITYKNMESTK 120
           DPVNRKLFVRGLAWNTTSETLCAAFS+HGEIEEGAVIYDKATGKSRGYGFITYK+M+STK
Sbjct: 61  DPVNRKLFVRGLAWNTTSETLCAAFSVHGEIEEGAVIYDKATGKSRGYGFITYKHMDSTK 120

Query: 121 AALKAPSKIIEGRMAVCNLACEGLSGSSTTPDLAQRKLYIGGLSPDITSEILLNFFGRYG 180
           AAL+APSKIIEGRMAVCNLACEGLSGSSTTPDLAQRKLYIGGLSPDITSEILLNFFGRYG
Sbjct: 121 AALRAPSKIIEGRMAVCNLACEGLSGSSTTPDLAQRKLYIGGLSPDITSEILLNFFGRYG 180

Query: 181 DIEEGSVAYDKDTNESRGFGFVTYTTVEAAKKAIDDPDKTFGGRNIIVKLADSHRNKMMQ 240
           DIEEGSVAYDKDTNESRGFGFVTYTTVEAAKKAIDDPDKTFGGRNIIVKLADSHRNKMMQ
Sbjct: 181 DIEEGSVAYDKDTNESRGFGFVTYTTVEAAKKAIDDPDKTFGGRNIIVKLADSHRNKMMQ 240

Query: 241 AQVSPAIPSMPYPVAAGYPQPGKPHGGVAPVGYAYPQALASYPASYPSPTTAHASYASQP 300
           AQVS AIPSMPYPVAAGYPQPGKPHG V PVGYAYPQALASYPASYPSPTTAHASYASQP
Sbjct: 241 AQVSSAIPSMPYPVAAGYPQPGKPHGSVVPVGYAYPQALASYPASYPSPTTAHASYASQP 300

Query: 301 QMPYPHQVIGKKDAPGLHPITPAGMGGYPYYMAKQ 336
           QMPYPHQVIGKKDA GLHPITP GMGGYPYYMAKQ
Sbjct: 301 QMPYPHQVIGKKDAAGLHPITP-GMGGYPYYMAKQ 334

[Close]

BLAST of HG10019957 vs. NCBI nr
Match: XP_023526302.1 (UBP1-associated protein 2C-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 632.1 bits (1629), Expect = 2.7e-177
Identity = 319/337 (94.66%), Postives = 325/337 (96.44%), Query Frame = 0


Query: 1   MEDLKKRKLEETAGNGEFSSVEHLRSLLEPLPKPQLVDLLAKLGSQYPSIAEEIKSVASA 60
           MEDLKKRKLEET GNGEFSSVEHLRSLLEPLPKPQLVDLLA+LGSQYPSIAEEIKSVASA
Sbjct: 1   MEDLKKRKLEETVGNGEFSSVEHLRSLLEPLPKPQLVDLLARLGSQYPSIAEEIKSVASA 60

Query: 61  DPVNRKLFVRGLAWNTTSETLCAAFSMHGEIEEGAVIYDKATGKSRGYGFITYKNMESTK 120
           DPVNRKLFVRGLAWNTTSETLCA FS+HGEIEEGAVIYDK TGKSRGYGFITYK+MESTK
Sbjct: 61  DPVNRKLFVRGLAWNTTSETLCATFSVHGEIEEGAVIYDKTTGKSRGYGFITYKHMESTK 120

Query: 121 AALKAPSKIIEGRMAVCNLACEGLSGSSTTPDLAQRKLYIGGLSPDITSEILLNFFGRYG 180
           AALKAPSKIIEGRMAVCNLACEGLSGSSTTPDLAQRKLYIGGLSPDITSE+LLNFFGRYG
Sbjct: 121 AALKAPSKIIEGRMAVCNLACEGLSGSSTTPDLAQRKLYIGGLSPDITSEMLLNFFGRYG 180

Query: 181 DIEEGSVAYDKDTNESRGFGFVTYTTVEAAKKAIDDPDKTFGGRNIIVKLADSHRNKMMQ 240
           DIEEGSVAYDKDTNESRGFGFVTYTTVEA KKAIDDPDKTFGGRNIIVKLADSHRNKMMQ
Sbjct: 181 DIEEGSVAYDKDTNESRGFGFVTYTTVEATKKAIDDPDKTFGGRNIIVKLADSHRNKMMQ 240

Query: 241 AQVSPAIPSMPYPV-AAGYPQPGKPHGGVAPVGYAY-PQALASYPASYPSPTTAHASYAS 300
           AQV PAIPSMPYPV AAGYPQPGKPHGGV PVGYAY PQALASY ASYPSPT+AHASYAS
Sbjct: 241 AQVPPAIPSMPYPVAAAGYPQPGKPHGGVTPVGYAYPPQALASYHASYPSPTSAHASYAS 300

Query: 301 QPQMPYPHQVIGKKDAPGLHPITPAGMGGYPYYMAKQ 336
           QPQMP+PHQVIGKKD PGLH  TPAGMGGYPYYMAKQ
Sbjct: 301 QPQMPHPHQVIGKKDTPGLHLTTPAGMGGYPYYMAKQ 337

[Close]

BLAST of HG10019957 vs. ExPASy Swiss-Prot
Match: Q9LKA4 (UBP1-associated protein 2C OS=Arabidopsis thaliana OX=3702 GN=UBA2C PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.3e-44
Identity = 114/305 (37.38%), Postives = 169/305 (55.41%), Query Frame = 0


Query: 1   MEDLKKRKLEE------TAGNGEFS----SVEHLRSLLEPLPKPQLVDLLAKLGSQYPSI 60
           M+ +KKRKL+E      T G G       S +  R ++E     QL+DLL +   ++P +
Sbjct: 1   MDMMKKRKLDENGNGLNTNGGGTIGPTRLSPQDARKIIERFTTDQLLDLLQEAIVRHPDV 60

Query: 61  AEEIKSVASADPVNRKLFVRGLAWNTTSETLCAAFSMHGEIEEGAVIYDKATGKSRGYGF 120
            E ++  A +D   RKLF+RGLA +TT+E L + FS +G++EE  VI DK TGKS+GYGF
Sbjct: 61  LESVRLTADSDISQRKLFIRGLAADTTTEGLRSLFSSYGDLEEAIVILDKVTGKSKGYGF 120

Query: 121 ITYKNMESTKAALKAPSKIIEGRMAVCNLACEGLSGS-STTPDLAQRKLYIGGLSPDITS 180
           +T+ +++    ALK PSK I+GR+ V  LA  G  G+ S   D++ RK+Y+  +  D+ +
Sbjct: 121 VTFMHVDGALLALKEPSKKIDGRVTVTQLAASGNQGTGSQIADISMRKIYVANVPFDMPA 180

Query: 181 EILLNFFGRYGDIEEGSVAYDKDTNESRGFGFVTYTTVEAAKKAIDDPDKTFGGRNIIVK 240
           + LLN F  YGD+EEG + +DK T +SRGF    Y T E A+ A+ DP K   G+++  K
Sbjct: 181 DRLLNHFMAYGDVEEGPLGFDKVTGKSRGFALFVYKTAEGAQAALADPVKVIDGKHLNCK 240

Query: 241 LA----DSHRNKMMQAQVSPAIPSMPYPVAAGYPQPGKPHGGVAPVGYAYPQALASYPAS 291
           LA       +  M QAQ   +     +    G  +P  P+G    +  AY       PA 
Sbjct: 241 LAVDGKKGGKPGMPQAQDGGSGHGHVHGEGMGMVRPAGPYGAAGGIS-AYGGYSGGPPAH 300

[Close]

BLAST of HG10019957 vs. ExPASy Swiss-Prot
Match: O80678 (UBP1-associated protein 2B OS=Arabidopsis thaliana OX=3702 GN=UBA2B PE=2 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 9.2e-43
Identity = 93/237 (39.24%), Postives = 137/237 (57.81%), Query Frame = 0


Query: 14  GNGEFSSVEHLRSLLEPLPKPQLVDLLAKLGSQYPSIAEEIKSVASADPVNRKLFVRGLA 73
           GN +    E +  LLEP  K QL+ LL +   ++  +A  I+ VA  D V+RK+FV GL 
Sbjct: 77  GNEDDDEEEPIEDLLEPFSKDQLLILLKEAAERHRDVANRIRIVADEDLVHRKIFVHGLG 136

Query: 74  WNTTSETLCAAFSMHGEIEEGAVIYDKATGKSRGYGFITYKNMESTKAALKAPSKIIEGR 133
           W+T +++L  AF  +GEIE+   + DK +G+S+GYGFI +K+    + ALK P K I  R
Sbjct: 137 WDTKADSLIDAFKQYGEIEDCKCVVDKVSGQSKGYGFILFKSRSGARNALKQPQKKIGTR 196

Query: 134 MAVCNLACEG-LSGSST-------TPDLAQRKLYIGGLSPDITSEILLNFFGRYGDIEEG 193
           M  C LA  G + G+          P+  QRK+Y+  +S DI  + LL FF R+G+IEEG
Sbjct: 197 MTACQLASIGPVQGNPVVAPAQHFNPENVQRKIYVSNVSADIDPQKLLEFFSRFGEIEEG 256

Query: 194 SVAYDKDTNESRGFGFVTYTTVEAAKKAIDDPDKTFGGRNIIVKLADSHRNKMMQAQ 243
            +  DK T   +GF    Y ++E+AKKA+++P KTF G  +    A+    ++ Q Q
Sbjct: 257 PLGLDKATGRPKGFALFVYRSLESAKKALEEPHKTFEGHVLHCHKANDGPKQVKQHQ 313

[Close]

BLAST of HG10019957 vs. ExPASy Swiss-Prot
Match: Q9LES2 (UBP1-associated protein 2A OS=Arabidopsis thaliana OX=3702 GN=UBA2A PE=1 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 1.1e-40
Identity = 108/305 (35.41%), Postives = 156/305 (51.15%), Query Frame = 0


Query: 13  AGNGEFSSVEHLRSLLEPLPKPQLVDLLAKLGSQYPSIAEEIKSVASADPVNRKLFVRGL 72
           +GN E    E ++ LLEP  K Q++ LL +   ++  +A  I+ VA  DPV+RK+FV GL
Sbjct: 88  SGNQEDDDDEPIQDLLEPFSKEQVLSLLKEAAEKHVDVANRIREVADEDPVHRKIFVHGL 147

Query: 73  AWNTTSETLCAAFSMHGEIEEGAVIYDKATGKSRGYGFITYKNMESTKAALKAPSKIIEG 132
            W+T +ETL  AF  +GEIE+   ++DK +GKS+GYGFI YK+    + ALK P K I  
Sbjct: 148 GWDTKTETLIEAFKQYGEIEDCKAVFDKISGKSKGYGFILYKSRSGARNALKQPQKKIGS 207

Query: 133 RMAVCNLACEG--------------LSGSSTTPDLAQRKLYIGGLSPDITSEILLNFFGR 192
           RM  C LA +G                   +  +  Q+K+Y+  +  ++  + LL FF +
Sbjct: 208 RMTACQLASKGPVFGGAPIAAAAVSAPAQHSNSEHTQKKIYVSNVGAELDPQKLLMFFSK 267

Query: 193 YGDIEEGSVAYDKDTNESRGFGFVTYTTVEAAKKAIDDPDKTFGGRNI-IVKLADSHR-N 252
           +G+IEEG +  DK T   +GF    Y + E+AK+A+++P KTF G  +   K  D  +  
Sbjct: 268 FGEIEEGPLGLDKYTGRPKGFCLFVYKSSESAKRALEEPHKTFEGHILHCQKAIDGPKPG 327

Query: 253 KMMQAQVSPAI---PSMPYPVAAGYPQPGKPHGGVA---PVGYAYPQALASYPASYPSPT 296
           K  Q   +P     P        GY  PG  HG +    P G   P A    PA   + T
Sbjct: 328 KQQQHHHNPHAYNNPRYQRNDNNGYGPPG-GHGHLMAGNPAGMGGPTAQVINPAIGQALT 387

[Close]

BLAST of HG10019957 vs. ExPASy Swiss-Prot
Match: Q9LJ04 (RNA-binding protein P OS=Oryza sativa subsp. japonica OX=39947 GN=RBP-P PE=1 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 9.5e-40
Identity = 91/248 (36.69%), Postives = 133/248 (53.63%), Query Frame = 0


Query: 2   EDLKKRKLEETAGNGEFS------SVEHLRSLLEPLPKPQLVDLLAKLGSQYPSIAEEIK 61
           E+++  + E+  G GE          + +++LL   PK QLV+LL+     +  +   + 
Sbjct: 87  EEVEVDEDEDGEGEGEEEEEAAERDADSIQALLNSFPKDQLVELLSAAALSHEDVLTAVH 146

Query: 62  SVASADPVNRKLFVRGLAWNTTSETLCAAFSMHGEIEEGAVIYDKATGKSRGYGFITYKN 121
             A ADP  RK+FV GL W+ T+ETL  AFS +GEIE+  V+ D+ATGK +GYGFI +  
Sbjct: 147 RAADADPALRKIFVHGLGWDATAETLTEAFSAYGEIEDLRVVTDRATGKCKGYGFILFSR 206

Query: 122 MESTKAALKAPSKIIEGRMAVCNLACEG---LSGSSTTP-----------------DLAQ 181
               +AAL+ P K I  R   C LA  G     G +T P                 +  Q
Sbjct: 207 RSGARAALREPQKKIGNRTTACQLASVGPVPPGGMATNPAPAVAPAPAQLALPPVSEYTQ 266

Query: 182 RKLYIGGLSPDITSEILLNFFGRYGDIEEGSVAYDKDTNESRGFGFVTYTTVEAAKKAID 224
           RK+++  +  DI  + LL FF +YG+IEEG +  DK T + +GF    Y T+++AKKA+ 
Sbjct: 267 RKIFVSNVGADIDPQKLLQFFSKYGEIEEGPLGLDKVTGKPKGFALFVYKTLDSAKKALQ 326

[Close]

BLAST of HG10019957 vs. ExPASy Swiss-Prot
Match: Q9SHZ6 (UBP1-associated proteins 1A OS=Arabidopsis thaliana OX=3702 GN=UBA1A PE=1 SV=2)

HSP 1 Score: 112.5 bits (280), Expect = 9.5e-24
Identity = 62/142 (43.66%), Postives = 79/142 (55.63%), Query Frame = 0


Query: 11  ETAGNGEFSSVEHLRSLLEPLPKPQLVDLLAKLGSQYPSIAEEIKSVASADPVNRKLFVR 70
           ++  + EF   E LR LL+P  K QLVDL+        SI   +   A  D  +RK+FV 
Sbjct: 51  DSESDNEFDP-EELRELLQPYSKDQLVDLVCSASRIGSSIYSAVVEAADRDVTHRKIFVY 110

Query: 71  GLAWNTTSETLCAAFSMHGEIEEGAVIYDKATGKSRGYGFITYKNMESTKAALKAPSKII 130
           GL W TT ETL   F  +GEIEE  V+ DKATGK++G+GF+ +K  +  K ALK P K I
Sbjct: 111 GLPWETTRETLVGVFEGYGEIEECTVVIDKATGKAKGFGFVMFKTRKGAKEALKEPKKRI 170

Query: 131 EGRMAVCNLACEGLSGSSTTPD 153
             R A C LA  G + S    D
Sbjct: 171 LNRTATCQLASMGPAASGKGHD 191

[Close]

BLAST of HG10019957 vs. ExPASy TrEMBL
Match: A0A5A7TKB5 (UBP1-associated protein 2C-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G005530 PE=4 SV=1)

HSP 1 Score: 658.3 bits (1697), Expect = 1.7e-185
Identity = 326/335 (97.31%), Postives = 332/335 (99.10%), Query Frame = 0


Query: 1   MEDLKKRKLEETAGNGEFSSVEHLRSLLEPLPKPQLVDLLAKLGSQYPSIAEEIKSVASA 60
           MEDLKKRKLEET GNGEFSSVEHLRSLLEPLPKPQLVDLLA+LGSQYPSIAEEIKSVASA
Sbjct: 1   MEDLKKRKLEETVGNGEFSSVEHLRSLLEPLPKPQLVDLLARLGSQYPSIAEEIKSVASA 60

Query: 61  DPVNRKLFVRGLAWNTTSETLCAAFSMHGEIEEGAVIYDKATGKSRGYGFITYKNMESTK 120
           DPVNRKLFVRGLAWNTTSETLCAAFS+HGEIEEGAVIYDKATGKSRGYGFITYK+MESTK
Sbjct: 61  DPVNRKLFVRGLAWNTTSETLCAAFSVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTK 120

Query: 121 AALKAPSKIIEGRMAVCNLACEGLSGSSTTPDLAQRKLYIGGLSPDITSEILLNFFGRYG 180
           AALKAPSKIIEGRMAVCNLACEGLSGSSTTPDLAQRKLYIGGLSPDITSE+LLNFFGRYG
Sbjct: 121 AALKAPSKIIEGRMAVCNLACEGLSGSSTTPDLAQRKLYIGGLSPDITSEVLLNFFGRYG 180

Query: 181 DIEEGSVAYDKDTNESRGFGFVTYTTVEAAKKAIDDPDKTFGGRNIIVKLADSHRNKMMQ 240
           DIEEGSVAYDKDTNESRGFGFVTYTTVEAAKKAIDDPDKTFGGRNIIVKLADSHRNKMMQ
Sbjct: 181 DIEEGSVAYDKDTNESRGFGFVTYTTVEAAKKAIDDPDKTFGGRNIIVKLADSHRNKMMQ 240

Query: 241 AQVSPAIPSMPYPVAAGYPQPGKPHGGVAPVGYAYPQALASYPASYPSPTTAHASYASQP 300
           AQVSPAIPSMPYPVAAGYPQPGKPHGGVAPVGYAYPQAL SYPASYPSPTTAHASYASQP
Sbjct: 241 AQVSPAIPSMPYPVAAGYPQPGKPHGGVAPVGYAYPQALGSYPASYPSPTTAHASYASQP 300

Query: 301 QMPYPHQVIGKKDAPGLHPITPAGMGGYPYYMAKQ 336
           QMPYPHQ+IGKKDA GLHP+TPAGMGGYPYYMAKQ
Sbjct: 301 QMPYPHQLIGKKDATGLHPVTPAGMGGYPYYMAKQ 335

[Close]

BLAST of HG10019957 vs. ExPASy TrEMBL
Match: A0A1S3B7X8 (UBP1-associated protein 2C-like OS=Cucumis melo OX=3656 GN=LOC103486777 PE=4 SV=1)

HSP 1 Score: 658.3 bits (1697), Expect = 1.7e-185
Identity = 326/335 (97.31%), Postives = 332/335 (99.10%), Query Frame = 0


Query: 1   MEDLKKRKLEETAGNGEFSSVEHLRSLLEPLPKPQLVDLLAKLGSQYPSIAEEIKSVASA 60
           MEDLKKRKLEET GNGEFSSVEHLRSLLEPLPKPQLVDLLA+LGSQYPSIAEEIKSVASA
Sbjct: 1   MEDLKKRKLEETVGNGEFSSVEHLRSLLEPLPKPQLVDLLARLGSQYPSIAEEIKSVASA 60

Query: 61  DPVNRKLFVRGLAWNTTSETLCAAFSMHGEIEEGAVIYDKATGKSRGYGFITYKNMESTK 120
           DPVNRKLFVRGLAWNTTSETLCAAFS+HGEIEEGAVIYDKATGKSRGYGFITYK+MESTK
Sbjct: 61  DPVNRKLFVRGLAWNTTSETLCAAFSVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTK 120

Query: 121 AALKAPSKIIEGRMAVCNLACEGLSGSSTTPDLAQRKLYIGGLSPDITSEILLNFFGRYG 180
           AALKAPSKIIEGRMAVCNLACEGLSGSSTTPDLAQRKLYIGGLSPDITSE+LLNFFGRYG
Sbjct: 121 AALKAPSKIIEGRMAVCNLACEGLSGSSTTPDLAQRKLYIGGLSPDITSEVLLNFFGRYG 180

Query: 181 DIEEGSVAYDKDTNESRGFGFVTYTTVEAAKKAIDDPDKTFGGRNIIVKLADSHRNKMMQ 240
           DIEEGSVAYDKDTNESRGFGFVTYTTVEAAKKAIDDPDKTFGGRNIIVKLADSHRNKMMQ
Sbjct: 181 DIEEGSVAYDKDTNESRGFGFVTYTTVEAAKKAIDDPDKTFGGRNIIVKLADSHRNKMMQ 240

Query: 241 AQVSPAIPSMPYPVAAGYPQPGKPHGGVAPVGYAYPQALASYPASYPSPTTAHASYASQP 300
           AQVSPAIPSMPYPVAAGYPQPGKPHGGVAPVGYAYPQAL SYPASYPSPTTAHASYASQP
Sbjct: 241 AQVSPAIPSMPYPVAAGYPQPGKPHGGVAPVGYAYPQALGSYPASYPSPTTAHASYASQP 300

Query: 301 QMPYPHQVIGKKDAPGLHPITPAGMGGYPYYMAKQ 336
           QMPYPHQ+IGKKDA GLHP+TPAGMGGYPYYMAKQ
Sbjct: 301 QMPYPHQLIGKKDATGLHPVTPAGMGGYPYYMAKQ 335

[Close]

BLAST of HG10019957 vs. ExPASy TrEMBL
Match: A0A0A0LEH0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G809410 PE=4 SV=1)

HSP 1 Score: 653.7 bits (1685), Expect = 4.2e-184
Identity = 324/335 (96.72%), Postives = 330/335 (98.51%), Query Frame = 0


Query: 1   MEDLKKRKLEETAGNGEFSSVEHLRSLLEPLPKPQLVDLLAKLGSQYPSIAEEIKSVASA 60
           MEDLKKRKLEET GN EFSS+EHLR+LLEPLPKPQLVDLLA+LGSQYPSIAEEIKSVASA
Sbjct: 1   MEDLKKRKLEETVGNAEFSSLEHLRTLLEPLPKPQLVDLLARLGSQYPSIAEEIKSVASA 60

Query: 61  DPVNRKLFVRGLAWNTTSETLCAAFSMHGEIEEGAVIYDKATGKSRGYGFITYKNMESTK 120
           DPVNRKLFVRGLAWNTTSETLCAAFS+HGEIEEGAVIYDKATGKSRGYGFITYK+MESTK
Sbjct: 61  DPVNRKLFVRGLAWNTTSETLCAAFSVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTK 120

Query: 121 AALKAPSKIIEGRMAVCNLACEGLSGSSTTPDLAQRKLYIGGLSPDITSEILLNFFGRYG 180
           AALKAPSKIIEGRMAVCNLACEGLSGSSTTPDLAQRKLYIGGLSPDITSE+LLNFFGRYG
Sbjct: 121 AALKAPSKIIEGRMAVCNLACEGLSGSSTTPDLAQRKLYIGGLSPDITSEVLLNFFGRYG 180

Query: 181 DIEEGSVAYDKDTNESRGFGFVTYTTVEAAKKAIDDPDKTFGGRNIIVKLADSHRNKMMQ 240
           DIEEGSVAYDKDTNESRGFGFVTYTT EAAKKAIDDPDKTFGGRNIIVKLADSHRNKMMQ
Sbjct: 181 DIEEGSVAYDKDTNESRGFGFVTYTTAEAAKKAIDDPDKTFGGRNIIVKLADSHRNKMMQ 240

Query: 241 AQVSPAIPSMPYPVAAGYPQPGKPHGGVAPVGYAYPQALASYPASYPSPTTAHASYASQP 300
           AQVSPAIPSMPYPVAAGYPQPGKPHGGVAPVGYAYPQAL SYPASYPSPTTAHASYASQP
Sbjct: 241 AQVSPAIPSMPYPVAAGYPQPGKPHGGVAPVGYAYPQALGSYPASYPSPTTAHASYASQP 300

Query: 301 QMPYPHQVIGKKDAPGLHPITPAGMGGYPYYMAKQ 336
           QMPYPHQVIGKKDA GLHPITPAGMGGYPYYMAKQ
Sbjct: 301 QMPYPHQVIGKKDATGLHPITPAGMGGYPYYMAKQ 335

[Close]

BLAST of HG10019957 vs. ExPASy TrEMBL
Match: A0A6J1F6L7 (UBP1-associated protein 2C-like OS=Cucurbita moschata OX=3662 GN=LOC111441349 PE=4 SV=1)

HSP 1 Score: 630.2 bits (1624), Expect = 5.0e-177
Identity = 319/337 (94.66%), Postives = 326/337 (96.74%), Query Frame = 0


Query: 1   MEDLKKRKLEETAGNGEFSSVEHLRSLLEPLPKPQLVDLLAKLGSQYPSIAEEIKSVASA 60
           MEDLKKRKLEET GNGEFSSVEHLRSLLEPLPKPQLVDLLA+LGSQYPSIAEEIKSVASA
Sbjct: 6   MEDLKKRKLEETVGNGEFSSVEHLRSLLEPLPKPQLVDLLARLGSQYPSIAEEIKSVASA 65

Query: 61  DPVNRKLFVRGLAWNTTSETLCAAFSMHGEIEEGAVIYDKATGKSRGYGFITYKNMESTK 120
           DPVNRKLFVRGLAWNTTSETLCA FS+HGEIEEGAVIYDK TGKSRGYGFITYK+MESTK
Sbjct: 66  DPVNRKLFVRGLAWNTTSETLCATFSVHGEIEEGAVIYDKTTGKSRGYGFITYKHMESTK 125

Query: 121 AALKAPSKIIEGRMAVCNLACEGLSGSSTTPDLAQRKLYIGGLSPDITSEILLNFFGRYG 180
           AALKAPSKIIEGRMAVCNLACEGLSGSSTTPDLAQRKLYIGGLSPDITSE+LLNFFGRYG
Sbjct: 126 AALKAPSKIIEGRMAVCNLACEGLSGSSTTPDLAQRKLYIGGLSPDITSEMLLNFFGRYG 185

Query: 181 DIEEGSVAYDKDTNESRGFGFVTYTTVEAAKKAIDDPDKTFGGRNIIVKLADSHRNKMMQ 240
           DIEEGSVAYDKDTNESRGFGFVTYTTVEA KKAIDDPDKTFGGRNIIVKLADSHRNKMMQ
Sbjct: 186 DIEEGSVAYDKDTNESRGFGFVTYTTVEATKKAIDDPDKTFGGRNIIVKLADSHRNKMMQ 245

Query: 241 AQVSPAIPSMPYPV-AAGYPQPGKPHGGVAPVGYAY-PQALASYPASYPSPTTAHASYAS 300
           AQV PAIPSMPYPV AAGYPQPGKPHGGVAPVGYAY PQALASY ASYPS T+AHASYAS
Sbjct: 246 AQVPPAIPSMPYPVAAAGYPQPGKPHGGVAPVGYAYPPQALASYHASYPSLTSAHASYAS 305

Query: 301 QPQMPYPHQVIGKKDAPGLHPITPAGMGGYPYYMAKQ 336
           QPQ+P+PHQVIGKKDAPGLH ITP GMGGYPYYMAKQ
Sbjct: 306 QPQIPHPHQVIGKKDAPGLHLITPTGMGGYPYYMAKQ 342

[Close]

BLAST of HG10019957 vs. ExPASy TrEMBL
Match: A0A6J1J4I3 (UBP1-associated protein 2C-like OS=Cucurbita maxima OX=3661 GN=LOC111481690 PE=4 SV=1)

HSP 1 Score: 626.7 bits (1615), Expect = 5.6e-176
Identity = 318/337 (94.36%), Postives = 324/337 (96.14%), Query Frame = 0


Query: 1   MEDLKKRKLEETAGNGEFSSVEHLRSLLEPLPKPQLVDLLAKLGSQYPSIAEEIKSVASA 60
           MEDLKKRKLE T GNGEFSSVEHLRSLLEPLPKPQLVDLLA+LGSQYPSIAEEIKSVASA
Sbjct: 1   MEDLKKRKLEATVGNGEFSSVEHLRSLLEPLPKPQLVDLLARLGSQYPSIAEEIKSVASA 60

Query: 61  DPVNRKLFVRGLAWNTTSETLCAAFSMHGEIEEGAVIYDKATGKSRGYGFITYKNMESTK 120
           DPVNRKLFVRGLAWNTTSETLCA FS+HGEIEEGAVIYDK TGKSRGYGFITYK+MESTK
Sbjct: 61  DPVNRKLFVRGLAWNTTSETLCATFSVHGEIEEGAVIYDKTTGKSRGYGFITYKHMESTK 120

Query: 121 AALKAPSKIIEGRMAVCNLACEGLSGSSTTPDLAQRKLYIGGLSPDITSEILLNFFGRYG 180
           AALKAPSKIIEGRMAVCNLACEGLSGSSTTPDLAQRKLYIGGLSPDITSE+LLNFFGRYG
Sbjct: 121 AALKAPSKIIEGRMAVCNLACEGLSGSSTTPDLAQRKLYIGGLSPDITSEMLLNFFGRYG 180

Query: 181 DIEEGSVAYDKDTNESRGFGFVTYTTVEAAKKAIDDPDKTFGGRNIIVKLADSHRNKMMQ 240
           DIEEGSVAYDKDTNESRGFGFVTYTTVEA KKAIDDPDKTFGGRNIIVKLADSHRNKMMQ
Sbjct: 181 DIEEGSVAYDKDTNESRGFGFVTYTTVEATKKAIDDPDKTFGGRNIIVKLADSHRNKMMQ 240

Query: 241 AQVSPAIPSMPYPV-AAGYPQPGKPHGGVAPVGYAY-PQALASYPASYPSPTTAHASYAS 300
           AQV PAIPSMPYPV AAGYPQPGKPHGGVAPVGYAY PQALASY ASYPSPT+AHASYAS
Sbjct: 241 AQVPPAIPSMPYPVAAAGYPQPGKPHGGVAPVGYAYPPQALASYHASYPSPTSAHASYAS 300

Query: 301 QPQMPYPHQVIGKKDAPGLHPITPAGMGGYPYYMAKQ 336
            PQMP+PHQVIGKKDAPGLH  TPAGMG YPYYMAKQ
Sbjct: 301 LPQMPHPHQVIGKKDAPGLHLTTPAGMGCYPYYMAKQ 337

[Close]

BLAST of HG10019957 vs. TAIR 10
Match: AT3G15010.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 181.8 bits (460), Expect = 9.1e-46
Identity = 114/305 (37.38%), Postives = 169/305 (55.41%), Query Frame = 0


Query: 1   MEDLKKRKLEE------TAGNGEFS----SVEHLRSLLEPLPKPQLVDLLAKLGSQYPSI 60
           M+ +KKRKL+E      T G G       S +  R ++E     QL+DLL +   ++P +
Sbjct: 1   MDMMKKRKLDENGNGLNTNGGGTIGPTRLSPQDARKIIERFTTDQLLDLLQEAIVRHPDV 60

Query: 61  AEEIKSVASADPVNRKLFVRGLAWNTTSETLCAAFSMHGEIEEGAVIYDKATGKSRGYGF 120
            E ++  A +D   RKLF+RGLA +TT+E L + FS +G++EE  VI DK TGKS+GYGF
Sbjct: 61  LESVRLTADSDISQRKLFIRGLAADTTTEGLRSLFSSYGDLEEAIVILDKVTGKSKGYGF 120

Query: 121 ITYKNMESTKAALKAPSKIIEGRMAVCNLACEGLSGS-STTPDLAQRKLYIGGLSPDITS 180
           +T+ +++    ALK PSK I+GR+ V  LA  G  G+ S   D++ RK+Y+  +  D+ +
Sbjct: 121 VTFMHVDGALLALKEPSKKIDGRVTVTQLAASGNQGTGSQIADISMRKIYVANVPFDMPA 180

Query: 181 EILLNFFGRYGDIEEGSVAYDKDTNESRGFGFVTYTTVEAAKKAIDDPDKTFGGRNIIVK 240
           + LLN F  YGD+EEG + +DK T +SRGF    Y T E A+ A+ DP K   G+++  K
Sbjct: 181 DRLLNHFMAYGDVEEGPLGFDKVTGKSRGFALFVYKTAEGAQAALADPVKVIDGKHLNCK 240

Query: 241 LA----DSHRNKMMQAQVSPAIPSMPYPVAAGYPQPGKPHGGVAPVGYAYPQALASYPAS 291
           LA       +  M QAQ   +     +    G  +P  P+G    +  AY       PA 
Sbjct: 241 LAVDGKKGGKPGMPQAQDGGSGHGHVHGEGMGMVRPAGPYGAAGGIS-AYGGYSGGPPAH 300

[Close]

BLAST of HG10019957 vs. TAIR 10
Match: AT3G15010.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 181.8 bits (460), Expect = 9.1e-46
Identity = 114/305 (37.38%), Postives = 169/305 (55.41%), Query Frame = 0


Query: 1   MEDLKKRKLEE------TAGNGEFS----SVEHLRSLLEPLPKPQLVDLLAKLGSQYPSI 60
           M+ +KKRKL+E      T G G       S +  R ++E     QL+DLL +   ++P +
Sbjct: 1   MDMMKKRKLDENGNGLNTNGGGTIGPTRLSPQDARKIIERFTTDQLLDLLQEAIVRHPDV 60

Query: 61  AEEIKSVASADPVNRKLFVRGLAWNTTSETLCAAFSMHGEIEEGAVIYDKATGKSRGYGF 120
            E ++  A +D   RKLF+RGLA +TT+E L + FS +G++EE  VI DK TGKS+GYGF
Sbjct: 61  LESVRLTADSDISQRKLFIRGLAADTTTEGLRSLFSSYGDLEEAIVILDKVTGKSKGYGF 120

Query: 121 ITYKNMESTKAALKAPSKIIEGRMAVCNLACEGLSGS-STTPDLAQRKLYIGGLSPDITS 180
           +T+ +++    ALK PSK I+GR+ V  LA  G  G+ S   D++ RK+Y+  +  D+ +
Sbjct: 121 VTFMHVDGALLALKEPSKKIDGRVTVTQLAASGNQGTGSQIADISMRKIYVANVPFDMPA 180

Query: 181 EILLNFFGRYGDIEEGSVAYDKDTNESRGFGFVTYTTVEAAKKAIDDPDKTFGGRNIIVK 240
           + LLN F  YGD+EEG + +DK T +SRGF    Y T E A+ A+ DP K   G+++  K
Sbjct: 181 DRLLNHFMAYGDVEEGPLGFDKVTGKSRGFALFVYKTAEGAQAALADPVKVIDGKHLNCK 240

Query: 241 LA----DSHRNKMMQAQVSPAIPSMPYPVAAGYPQPGKPHGGVAPVGYAYPQALASYPAS 291
           LA       +  M QAQ   +     +    G  +P  P+G    +  AY       PA 
Sbjct: 241 LAVDGKKGGKPGMPQAQDGGSGHGHVHGEGMGMVRPAGPYGAAGGIS-AYGGYSGGPPAH 300

[Close]

BLAST of HG10019957 vs. TAIR 10
Match: AT2G41060.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 175.6 bits (444), Expect = 6.5e-44
Identity = 93/237 (39.24%), Postives = 137/237 (57.81%), Query Frame = 0


Query: 14  GNGEFSSVEHLRSLLEPLPKPQLVDLLAKLGSQYPSIAEEIKSVASADPVNRKLFVRGLA 73
           GN +    E +  LLEP  K QL+ LL +   ++  +A  I+ VA  D V+RK+FV GL 
Sbjct: 77  GNEDDDEEEPIEDLLEPFSKDQLLILLKEAAERHRDVANRIRIVADEDLVHRKIFVHGLG 136

Query: 74  WNTTSETLCAAFSMHGEIEEGAVIYDKATGKSRGYGFITYKNMESTKAALKAPSKIIEGR 133
           W+T +++L  AF  +GEIE+   + DK +G+S+GYGFI +K+    + ALK P K I  R
Sbjct: 137 WDTKADSLIDAFKQYGEIEDCKCVVDKVSGQSKGYGFILFKSRSGARNALKQPQKKIGTR 196

Query: 134 MAVCNLACEG-LSGSST-------TPDLAQRKLYIGGLSPDITSEILLNFFGRYGDIEEG 193
           M  C LA  G + G+          P+  QRK+Y+  +S DI  + LL FF R+G+IEEG
Sbjct: 197 MTACQLASIGPVQGNPVVAPAQHFNPENVQRKIYVSNVSADIDPQKLLEFFSRFGEIEEG 256

Query: 194 SVAYDKDTNESRGFGFVTYTTVEAAKKAIDDPDKTFGGRNIIVKLADSHRNKMMQAQ 243
            +  DK T   +GF    Y ++E+AKKA+++P KTF G  +    A+    ++ Q Q
Sbjct: 257 PLGLDKATGRPKGFALFVYRSLESAKKALEEPHKTFEGHVLHCHKANDGPKQVKQHQ 313

[Close]

BLAST of HG10019957 vs. TAIR 10
Match: AT2G41060.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 175.6 bits (444), Expect = 6.5e-44
Identity = 93/237 (39.24%), Postives = 137/237 (57.81%), Query Frame = 0


Query: 14  GNGEFSSVEHLRSLLEPLPKPQLVDLLAKLGSQYPSIAEEIKSVASADPVNRKLFVRGLA 73
           GN +    E +  LLEP  K QL+ LL +   ++  +A  I+ VA  D V+RK+FV GL 
Sbjct: 77  GNEDDDEEEPIEDLLEPFSKDQLLILLKEAAERHRDVANRIRIVADEDLVHRKIFVHGLG 136

Query: 74  WNTTSETLCAAFSMHGEIEEGAVIYDKATGKSRGYGFITYKNMESTKAALKAPSKIIEGR 133
           W+T +++L  AF  +GEIE+   + DK +G+S+GYGFI +K+    + ALK P K I  R
Sbjct: 137 WDTKADSLIDAFKQYGEIEDCKCVVDKVSGQSKGYGFILFKSRSGARNALKQPQKKIGTR 196

Query: 134 MAVCNLACEG-LSGSST-------TPDLAQRKLYIGGLSPDITSEILLNFFGRYGDIEEG 193
           M  C LA  G + G+          P+  QRK+Y+  +S DI  + LL FF R+G+IEEG
Sbjct: 197 MTACQLASIGPVQGNPVVAPAQHFNPENVQRKIYVSNVSADIDPQKLLEFFSRFGEIEEG 256

Query: 194 SVAYDKDTNESRGFGFVTYTTVEAAKKAIDDPDKTFGGRNIIVKLADSHRNKMMQAQ 243
            +  DK T   +GF    Y ++E+AKKA+++P KTF G  +    A+    ++ Q Q
Sbjct: 257 PLGLDKATGRPKGFALFVYRSLESAKKALEEPHKTFEGHVLHCHKANDGPKQVKQHQ 313

[Close]

BLAST of HG10019957 vs. TAIR 10
Match: AT3G56860.3 (UBP1-associated protein 2A )

HSP 1 Score: 168.7 bits (426), Expect = 8.0e-42
Identity = 108/305 (35.41%), Postives = 156/305 (51.15%), Query Frame = 0


Query: 13  AGNGEFSSVEHLRSLLEPLPKPQLVDLLAKLGSQYPSIAEEIKSVASADPVNRKLFVRGL 72
           +GN E    E ++ LLEP  K Q++ LL +   ++  +A  I+ VA  DPV+RK+FV GL
Sbjct: 88  SGNQEDDDDEPIQDLLEPFSKEQVLSLLKEAAEKHVDVANRIREVADEDPVHRKIFVHGL 147

Query: 73  AWNTTSETLCAAFSMHGEIEEGAVIYDKATGKSRGYGFITYKNMESTKAALKAPSKIIEG 132
            W+T +ETL  AF  +GEIE+   ++DK +GKS+GYGFI YK+    + ALK P K I  
Sbjct: 148 GWDTKTETLIEAFKQYGEIEDCKAVFDKISGKSKGYGFILYKSRSGARNALKQPQKKIGS 207

Query: 133 RMAVCNLACEG--------------LSGSSTTPDLAQRKLYIGGLSPDITSEILLNFFGR 192
           RM  C LA +G                   +  +  Q+K+Y+  +  ++  + LL FF +
Sbjct: 208 RMTACQLASKGPVFGGAPIAAAAVSAPAQHSNSEHTQKKIYVSNVGAELDPQKLLMFFSK 267

Query: 193 YGDIEEGSVAYDKDTNESRGFGFVTYTTVEAAKKAIDDPDKTFGGRNI-IVKLADSHR-N 252
           +G+IEEG +  DK T   +GF    Y + E+AK+A+++P KTF G  +   K  D  +  
Sbjct: 268 FGEIEEGPLGLDKYTGRPKGFCLFVYKSSESAKRALEEPHKTFEGHILHCQKAIDGPKPG 327

Query: 253 KMMQAQVSPAI---PSMPYPVAAGYPQPGKPHGGVA---PVGYAYPQALASYPASYPSPT 296
           K  Q   +P     P        GY  PG  HG +    P G   P A    PA   + T
Sbjct: 328 KQQQHHHNPHAYNNPRYQRNDNNGYGPPG-GHGHLMAGNPAGMGGPTAQVINPAIGQALT 387

The following BLAST results are available for this feature:

BLAST of HG10019957 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008443071.1	3.6e-185	97.31	PREDICTED: UBP1-associated protein 2C-like [Cucumis melo] >KAA0043722.1 UBP1-ass...	[more]
XP_004136575.1	8.8e-184	96.72	UBP1-associated protein 2C [Cucumis sativus] >KGN59314.1 hypothetical protein Cs...	[more]
XP_038904904.1	8.5e-179	95.24	UBP1-associated protein 2C-like [Benincasa hispida]	[more]
XP_038906210.1	1.2e-177	94.93	UBP1-associated protein 2C-like [Benincasa hispida]	[more]
XP_023526302.1	2.7e-177	94.66	UBP1-associated protein 2C-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of HG10019957 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LKA4	1.3e-44	37.38	UBP1-associated protein 2C OS=Arabidopsis thaliana OX=3702 GN=UBA2C PE=2 SV=1	[more]
O80678	9.2e-43	39.24	UBP1-associated protein 2B OS=Arabidopsis thaliana OX=3702 GN=UBA2B PE=2 SV=1	[more]
Q9LES2	1.1e-40	35.41	UBP1-associated protein 2A OS=Arabidopsis thaliana OX=3702 GN=UBA2A PE=1 SV=1	[more]
Q9LJ04	9.5e-40	36.69	RNA-binding protein P OS=Oryza sativa subsp. japonica OX=39947 GN=RBP-P PE=1 SV=...	[more]
Q9SHZ6	9.5e-24	43.66	UBP1-associated proteins 1A OS=Arabidopsis thaliana OX=3702 GN=UBA1A PE=1 SV=2	[more]

BLAST of HG10019957 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TKB5	1.7e-185	97.31	UBP1-associated protein 2C-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A1S3B7X8	1.7e-185	97.31	UBP1-associated protein 2C-like OS=Cucumis melo OX=3656 GN=LOC103486777 PE=4 SV=...	[more]
A0A0A0LEH0	4.2e-184	96.72	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G809410 PE=4 SV=1	[more]
A0A6J1F6L7	5.0e-177	94.66	UBP1-associated protein 2C-like OS=Cucurbita moschata OX=3662 GN=LOC111441349 PE...	[more]
A0A6J1J4I3	5.6e-176	94.36	UBP1-associated protein 2C-like OS=Cucurbita maxima OX=3661 GN=LOC111481690 PE=4...	[more]

BLAST of HG10019957 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G15010.1	9.1e-46	37.38	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT3G15010.2	9.1e-46	37.38	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT2G41060.1	6.5e-44	39.24	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT2G41060.2	6.5e-44	39.24	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT3G56860.3	8.0e-42	35.41	UBP1-associated protein 2A	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 157..229 e-value: 2.7E-24 score: 96.7 coord: 66..138 e-value: 1.6E-19 score: 80.9
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 158..226 e-value: 2.4E-16 score: 59.3 coord: 67..133 e-value: 8.7E-14 score: 51.1
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 156..233 score: 17.165293
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 65..156 score: 14.146487
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 147..246 e-value: 1.6E-24 score: 88.0
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 45..146 e-value: 1.2E-20 score: 75.8
None	No IPR available	PANTHER	PTHR48027:SF13	UBP1-ASSOCIATED PROTEIN 2C-LIKE	coord: 16..335
None	No IPR available	PANTHER	PTHR48027	HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED	coord: 16..335
None	No IPR available	CDD	cd12384	RRM_RBM24_RBM38_like	coord: 65..140 e-value: 3.82001E-34 score: 118.487
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 154..243
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 53..142

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10019957.1	HG10019957.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding