HG10019956 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10019956
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Squamosa-promoter binding-like protein
Location	Chr04: 27285176 .. 27290519 (-)
RNA-Seq Expression	HG10019956
Synteny	HG10019956

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAATGGATTGCAGCTCTTTGACTGAGTCTGGTGGGTCTTCAAATTCCTCACCACCAAATTCATCAGCTGAATCACTCAATGGCCTCAAATTTGGACAGAAAATTTACTTTGAAGATGTGGGTATTGGAGAGCTTCCCAAATCAGGTGGGGGATCTTTCTCATCTTCAGCTGTAATTGCATCAACACCCACCAAGAAACCTAGGGGAGGAGTTGTTCAGGCAGCTCAGCCCCCTAGGTGCCAGGTTGAAGGCTGTAGAGTAGATCTAAGTGATGCAAAGGCTTACTATTCCAGACACAAAGTTTGTACTATGCACTCCAAATCCCCTAAGGTCATTGTTGCTGGTCTTGAGCAAAGGTTTTGCCAACAGTGTAGCAGGTCAGCTGGTTTCTCTCACTCTTGGTTTTGCAAAATCATTCTCTTCATGAGTTCTGATTGGTGGTATCTTTTTTTTTTTTTTTTTTTTAATGGTTGTTGGGTATCCTTTTAGTATATGCTGGAACTATCTCTTTGGTTTTCCTTTGATCTGTTAGTTGGTTGGTTTAATTTATAAAAATATTTGTACTTCCTTTTGGTCTTATGAGTAGTGATTAGATTTCTTTCTAGTAAATATGACTGAAGGATTCGTTTTACTGTTTTGTTTGTCATTTCTCTTTGTTTCTGTCCTGTTTTGAGTTTCGTTTTTGTTATAAGCTTTGTTTTATCTTGTTCCTTGTACCATTTTTGTTGAATCTGTAGATGCATATTAATATGGAGCTGTAGCATGGGGGTTGAATGCAGAGTGCTTTATGTGTTTATAGTTGGTTTCGTTTCTCTTCTATATTGACAAGGTTTATCTTCTTGTAATTAGATTTCTAGGGGTTTGGGTGGGGCCAACCACATTGGTTTTCTTTCTTTCTTTCAATTTTCTTAATTTCTTTTACAACATCCAAATTCCTGTTTTTGAACCAAACAGACCCTAACAGAAAAGGTTATAGAACCAAATAGCATCCAAGATTATTATATTTGTTTTTGATGTCCTTTTGTTAGCTCTGTTCTAATGGGATATTGTCAATTCTCCACCTTTAGCTTGATATCAAATCTGGAGCGGGGATGCCAGTCAGTAGACTCGATACAATGGCCTACACCTCATCATTCTGTTTATTCTTTTTTGTGCAACTGCTTGTTATGCTTTCCCTTTTAACTTTTTGAAATCCTCATAATCCAGAATACCATACATGTTTTTGTTGCAGCCTCCTTTAGGGCTTTGGAAACGAATATTTTAATTTATTCTTATTGTTTTACAAACAGTTATATGATAGGAATATTAATACAATGGAAACAAGTGAACTTGATATTCTATTCAATCCTCTAAAGTCCAAGGAGGTTACCAAAATTCCTTCCTTTTGGTCAATATCAAAACAGAGGAAAGAAATGAAAACCCTTTGGAGTTGGACTCCAGCTAGATACATCAAGTCACAAAAAGGGTTTTGATAATATTCTTCTGCTGATGGGAGTGCTGTCCCTCTGAACCTCTAGTCTGCCTCTTTTAAACTTCATTTGTGATAGACACAAGGGGTCTATTTCATGTGGAAAAACGTAGTGATGTGGGATTTGGATTCTGAAATTCCTTAGGTAAACATAGATATTCTGAAATTGTCTTAAGATCAATTGTTGAAGGAAAAAATTATCTCTAGTGCTGTGTTAATAGGTCAGGTGTAGTAATTTGTGTGATGTTTTTAAGTGATACCAATGGCTGAGTTAAAAATTGAAAACGGTTTCTTGGTGCCTAGACACAAAGCATTGAGCCGGATAGACTTAGGGACTCATATACACATATAGTATACATGATTAAATAGTATTACTTCGTAAAAGTCTTTTATGTTTATGGTTGTTTCCACTTACCAGTTGTAAAGTTCTGAATATATTAGGTTGCTGAGAAACAAAATGATAAAAAGGAACAGGAGAGACAAATGCCCAGATAAGAATACTGATGCGTTATAAAATGAAGAAGCAAAGTATTAGGATGATAACAAAATTCAATAGTTGTGAACTCATCAGTGCTTTTCTTTAAGCGTTTGGAGTAGTAGTCCTTGATGCTTAACCTTTGTGCTCCTTACCATGTATATCGACATCTACTTGAACTTGATGCTTCAAAGAATTTTCTTCCTGGTTCATTTGAGCAATAAGCCTTTCTTTCTGTTAGCTATGTTGCCCAAATTCAGACCGCACAATTAGTTTAGTGACTACCTTCCAGTTCCAGTTAACTAGGTGAGATCCTTCATTGGAACCCATCTCTTTCCTAACAAATATCTTATCGACTTGTCAATGCTTCCATAGCAAGGCTAGAAGGCTAGAAGTCCATAATGCATCTGTAACAACTCTTAGCTATATCTTTTGGTTCAACTTGAACGAAATGAATTCCAATTGTCAACTTTTCTATCATAGACCTAGGGGCAAAATCAAAACTTTGAGAGGCCTGCCTTACTACAGTAAACCCTCTCCCCTTTTTGTGCAAGTACCTGATTTGCCTTAGTAGGCTACTTTCTGGATTCTGGTTTTGCTGAAAATTTTCCTCATAAGTTTTATTGGGTGTGGGGGTTTTCTCTGATAACCATTTCCTAGCGAGGGAACTTGTTCAATATTTTAGATTTCTTTGAAGTAGTTTGAGGCTTCATAATAATTTGTATAGATATTGTGTTGTGGGCATTGATTATTTAAGGAAACTGGAAACTAGTGGCCAGAGGGTGGCTGACTCTTTTGGGGTTTCTACTGGTAAGTCCCTGTTTCCTGTCTTAGCTTTTGGGAATTTTAGTACTAAGTCACTTAGAACTAGAAGATTACTTACTACCAAGTGGCAGTTAATGGAAGAATTTAGGCTCCTCGTGGTTTGTGGAGAGAGAATATAAAAGGTCTTGAACTACAAGATAAACTAAGTCATTTGAGTTATGTGGACGCTCCCCTCTTGATATATCGCTCAAGTCCTGATTCCTAATTCACTTACCAAGTGCCTAACTTCCTCATTTTCCACTCTCTTCATTAATAACCAAACCCAACCACCTTCCTAACTTAGTACTAATATACCCTTACAATATCCCTAAGTTTCTTTAGTGGCATCCTTATGAAAACCCTATTATGATTCTCAGATTTTACAAAGCCGGTGCGGTGCTGTCTTTTGTAAGAGAAATGGGATAGCAACGGATGACCTTTTTCCTTCTCATGTATTGTCATCTCATCTTGGAGTTGTGGAGGAAGCTACTAACCTATTTGGCTGGTTCCTGACATTCTTGAATCATATTTAGACCTGTTAAATCATCAATCAACCCAAAATCAGAAGCTGATGGGTTATAATAAGTTTAATGATATCAATACTTCAACACTTCCCTCACTTGTGGGCTTGAAAATATATATAGATTGTCCAACAAATAGAAATCAATATTGAACGGGAAAGAAAATGACATTACAGGGTTCAAACCTAGGGCAAAAAACTTAAAGCTAATGAGTTATGGTCAATTTAATTATATCAATACTTCATCAATACTTCATCAAGACCTTCTCTTTCTTTCCAGACCCTAGTTTAAGGATAAAGGTAAGATTCTATTGGCTAATGACATTAGAGCTCCTTTCCGAGAAGTTTGATTGGAAAGAAATAGGAGGTTATTTAAAGGGATGGATGACCCACGAACTGGGTTGGGGATGGTCTCTTCTTTGTTACCTCTTTCTGGGCTTCCAATCATGGACACTTCTTAAATTCGATTTAACTTTGATTTGTGCAAGACGGTTTCTGCTATCATTCTGGCCTAGGCTTTGTACCTTTCTTTCGTTTTATGCAATTTTATTTCTTATTAAAGAAGAAAAAAAACTTGCATTTATATTTATATTCAAATAAGATCCATTACAATGAACTGTAATCTTTTTTGATAGTAAAGGTGATATTTCAATGAAATATACAAAAGAAAGGGGACATAAAACCAACCCCACATTTAAGAGAGGTTAAAAGAAAGACCTCCAATCAGTCAAAATATCAGTGATAGAGGAACTAATTACAAAAGGATTTACTAAGCCGATGCTGTAACAAAAAGGACACTGTCACTAAAAGATAAGCCAAAGAACTCCAGCCTTGTATTTGAACGAATGATTGAGGATGTATTTAGACAGATCATTGAGGAGAGAGAAGAGGTTGTCAGCTACAATGAGATCAAAAGCACAAGACCAACCTTATCTTTAAATGGATTATCAGAAGCACAAGATTAATGCCCTTTATTTTTGTTTTCAAATGCTAATAATGTACGGATGATGCTAGATTACAAGGAGTATTCAGTACGATTAAGGGATTAGAGCATCCTTCCATAATAATGAGAACCAAGTTGAATGATGGAGAGGATATATCTTTAGAAGTGGACAAGTAACGTTGGCAGGATGAGTTCTTGGATCTTTATGTCATTTGGAGAAGTTCTTTTGGAATCTTTTGTCGGTTTTTCGCGTTCCTCTCCTCTTTAATTTCATTTGTTAAATGAAAATAGTTTCTTACCAAAAGATGTGATGTAGGATGAGTAGTGGTTCATTCACCAGATTTTGGTTCCTGTCTCATTAGAAATGAAGGACACGGTTGCACAAGCTATAGAATATACCCTCTTTAAGTAAGGACGTGAAGTAGGAAGAAGGAAGAAGGAAGAAGGAAGCAATATAACAATATATGGGAGATGAGGGGATGTGAATCTACCAACTAAGCTCACAAGTAATACCAGATTACTAAATCATTTTAATCTCAATATTGAATCAAATTGAGGAAGTAACGCCACAATTATGGTTAAAGAGTTCCTATACGTAAATGAAAGCCAACTCGTCTAAAAAAAAAGCCAACTATGATGCAACTTTTACTTAAAGCTTGCATGATGAAATTCAACCTGACTATGGTATTTGCGGTTTCCTCTTCTTGTGGGGTTAGAGGGTGATCTGAACTGATGAACTGCAAAAGCAGCTTTCGGTAGCTATTTTTCTTTTTCTTTTTTGTTTTGTAATTTTTTTATTCATCTTTGAAATCTTGATACTCCTTATGATGTGGAGAATTTTTCTCTATGGTCTTTATTATTTTCCTTATCAAATTTTCCCCCTCATCTCTTATTACTTAGAATCTGATCTTTTAGTGTTTCCAGATGTGTTATGTTTTCTCCTCAAGTAGTTTACTGAAACTGATTGCTGATTTGGTTTTTGCCAGATTTCATCAGCTTCCTGAATTTGATCAAGGAAAACGTAGTTGTCGCAGACGTCTGGCTGGTCATAATGAGCGCCGTAGGAAGCCTCCACCCGGGTCGCTATTATCCACTCGTTATGGCCGCTTCTCTTCATCTATCTTTGGTTAG

mRNA sequence

ATGGAAATGGATTGCAGCTCTTTGACTGAGTCTGGTGGGTCTTCAAATTCCTCACCACCAAATTCATCAGCTGAATCACTCAATGGCCTCAAATTTGGACAGAAAATTTACTTTGAAGATGTGGGTATTGGAGAGCTTCCCAAATCAGGTGGGGGATCTTTCTCATCTTCAGCTGTAATTGCATCAACACCCACCAAGAAACCTAGGGGAGGAGTTGTTCAGGCAGCTCAGCCCCCTAGGTGCCAGGTTGAAGGCTGTAGAGTAGATCTAAGTGATGCAAAGGCTTACTATTCCAGACACAAAGTTTGTACTATGCACTCCAAATCCCCTAAGGTCATTGTTGCTGGTCTTGAGCAAAGGTTTTGCCAACAGTGTAGCAGATTTCATCAGCTTCCTGAATTTGATCAAGGAAAACGTAGTTGTCGCAGACGTCTGGCTGGTCATAATGAGCGCCGTAGGAAGCCTCCACCCGGGTCGCTATTATCCACTCGTTATGGCCGCTTCTCTTCATCTATCTTTGGTTAG

Coding sequence (CDS)

ATGGAAATGGATTGCAGCTCTTTGACTGAGTCTGGTGGGTCTTCAAATTCCTCACCACCAAATTCATCAGCTGAATCACTCAATGGCCTCAAATTTGGACAGAAAATTTACTTTGAAGATGTGGGTATTGGAGAGCTTCCCAAATCAGGTGGGGGATCTTTCTCATCTTCAGCTGTAATTGCATCAACACCCACCAAGAAACCTAGGGGAGGAGTTGTTCAGGCAGCTCAGCCCCCTAGGTGCCAGGTTGAAGGCTGTAGAGTAGATCTAAGTGATGCAAAGGCTTACTATTCCAGACACAAAGTTTGTACTATGCACTCCAAATCCCCTAAGGTCATTGTTGCTGGTCTTGAGCAAAGGTTTTGCCAACAGTGTAGCAGATTTCATCAGCTTCCTGAATTTGATCAAGGAAAACGTAGTTGTCGCAGACGTCTGGCTGGTCATAATGAGCGCCGTAGGAAGCCTCCACCCGGGTCGCTATTATCCACTCGTTATGGCCGCTTCTCTTCATCTATCTTTGGTTAG

Protein sequence

MEMDCSSLTESGGSSNSSPPNSSAESLNGLKFGQKIYFEDVGIGELPKSGGGSFSSSAVIASTPTKKPRGGVVQAAQPPRCQVEGCRVDLSDAKAYYSRHKVCTMHSKSPKVIVAGLEQRFCQQCSRFHQLPEFDQGKRSCRRRLAGHNERRRKPPPGSLLSTRYGRFSSSIFG

Homology

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BLAST of HG10019956 vs. NCBI nr
Match: XP_004136576.1 (squamosa promoter-binding-like protein 9 [Cucumis sativus] >KGN59315.1 hypothetical protein Csa_001653 [Cucumis sativus])

HSP 1 Score: 345.5 bits (885), Expect = 2.7e-91
Identity = 172/173 (99.42%), Postives = 173/173 (100.00%), Query Frame = 0


Query: 1   MEMDCSSLTESGGSSNSSPPNSSAESLNGLKFGQKIYFEDVGIGELPKSGGGSFSSSAVI 60
           MEMDCSSLTESGGSSNSSPPNSSAESLNGLKFGQKIYFEDVGIGELPKSGGGSFSSSAVI
Sbjct: 1   MEMDCSSLTESGGSSNSSPPNSSAESLNGLKFGQKIYFEDVGIGELPKSGGGSFSSSAVI 60

Query: 61  ASTPTKKPRGGVVQAAQPPRCQVEGCRVDLSDAKAYYSRHKVCTMHSKSPKVIVAGLEQR 120
           ASTPTKKPRGGVVQAAQPPRCQVEGCRVDL+DAKAYYSRHKVCTMHSKSPKVIVAGLEQR
Sbjct: 61  ASTPTKKPRGGVVQAAQPPRCQVEGCRVDLTDAKAYYSRHKVCTMHSKSPKVIVAGLEQR 120

Query: 121 FCQQCSRFHQLPEFDQGKRSCRRRLAGHNERRRKPPPGSLLSTRYGRFSSSIF 174
           FCQQCSRFHQLPEFDQGKRSCRRRLAGHNERRRKPPPGSLLSTRYGRFSSSIF
Sbjct: 121 FCQQCSRFHQLPEFDQGKRSCRRRLAGHNERRRKPPPGSLLSTRYGRFSSSIF 173

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BLAST of HG10019956 vs. NCBI nr
Match: XP_038905618.1 (squamosa promoter-binding-like protein 17 [Benincasa hispida])

HSP 1 Score: 345.1 bits (884), Expect = 3.5e-91
Identity = 171/173 (98.84%), Postives = 173/173 (100.00%), Query Frame = 0


Query: 1   MEMDCSSLTESGGSSNSSPPNSSAESLNGLKFGQKIYFEDVGIGELPKSGGGSFSSSAVI 60
           MEMDCS+LTESGGSSNSSPPNSSAESLNGLKFGQKIYFEDVGIGELPKSGGGSFSSSA+I
Sbjct: 1   MEMDCSTLTESGGSSNSSPPNSSAESLNGLKFGQKIYFEDVGIGELPKSGGGSFSSSAII 60

Query: 61  ASTPTKKPRGGVVQAAQPPRCQVEGCRVDLSDAKAYYSRHKVCTMHSKSPKVIVAGLEQR 120
           ASTPTKKPRGGVVQAAQPPRCQVEGCRVDLSDAKAYYSRHKVCTMHSKSPKVIVAGLEQR
Sbjct: 61  ASTPTKKPRGGVVQAAQPPRCQVEGCRVDLSDAKAYYSRHKVCTMHSKSPKVIVAGLEQR 120

Query: 121 FCQQCSRFHQLPEFDQGKRSCRRRLAGHNERRRKPPPGSLLSTRYGRFSSSIF 174
           FCQQCSRFHQLPEFDQGKRSCRRRLAGHNERRRKPPPGSLLSTRYGRFSSSIF
Sbjct: 121 FCQQCSRFHQLPEFDQGKRSCRRRLAGHNERRRKPPPGSLLSTRYGRFSSSIF 173

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BLAST of HG10019956 vs. NCBI nr
Match: XP_008443072.1 (PREDICTED: squamosa promoter-binding-like protein 9 isoform X1 [Cucumis melo])

HSP 1 Score: 337.0 bits (863), Expect = 9.4e-89
Identity = 168/173 (97.11%), Postives = 169/173 (97.69%), Query Frame = 0


Query: 1   MEMDCSSLTESGGSSNSSPPNSSAESLNGLKFGQKIYFEDVGIGELPKSGGGSFSSSAVI 60
           MEMDCSSLTESGGSSNSSPPNSSAESLNGLKFGQKIYFEDVGI ELPKSGGGSFSSSAVI
Sbjct: 1   MEMDCSSLTESGGSSNSSPPNSSAESLNGLKFGQKIYFEDVGIAELPKSGGGSFSSSAVI 60

Query: 61  ASTPTKKPRGGVVQAAQPPRCQVEGCRVDLSDAKAYYSRHKVCTMHSKSPKVIVAGLEQR 120
           ASTPTKKPRGGVV  AQPPRCQVEGCRVDL+DAKAYYSRHKVCTMHSKSPKVIVAGLEQR
Sbjct: 61  ASTPTKKPRGGVVHPAQPPRCQVEGCRVDLTDAKAYYSRHKVCTMHSKSPKVIVAGLEQR 120

Query: 121 FCQQCSRFHQLPEFDQGKRSCRRRLAGHNERRRKPPPGSLLSTRYGRFSSSIF 174
           FCQQCSRFHQLPEFDQGKRSCRRRLAGHNERRRKPPPGSLLS RYGRFSSSIF
Sbjct: 121 FCQQCSRFHQLPEFDQGKRSCRRRLAGHNERRRKPPPGSLLSPRYGRFSSSIF 173

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BLAST of HG10019956 vs. NCBI nr
Match: KAG6596230.1 (Squamosa promoter-binding-like protein 9, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 331.3 bits (848), Expect = 5.2e-87
Identity = 167/174 (95.98%), Postives = 170/174 (97.70%), Query Frame = 0


Query: 1   MEMDCSSLTESGGSSNSSPPNSSAESLNGLKFGQKIYFEDVGIGELPKSGGGSFSSSAVI 60
           MEMDCSSLTESGGS+ SSPP SSAESLNGLKFG KIYFEDVGIGELPKSGGGSFSSSAVI
Sbjct: 1   MEMDCSSLTESGGSTTSSPPISSAESLNGLKFGHKIYFEDVGIGELPKSGGGSFSSSAVI 60

Query: 61  ASTPTKKPR-GGVVQAAQPPRCQVEGCRVDLSDAKAYYSRHKVCTMHSKSPKVIVAGLEQ 120
           ASTPTKKPR GGVVQAAQPPRCQVEGC+VDLSDAKAYYSRHKVCTMHSKSPKVIVAG+EQ
Sbjct: 61  ASTPTKKPRGGGVVQAAQPPRCQVEGCKVDLSDAKAYYSRHKVCTMHSKSPKVIVAGIEQ 120

Query: 121 RFCQQCSRFHQLPEFDQGKRSCRRRLAGHNERRRKPPPGSLLSTRYGRFSSSIF 174
           RFCQQCSRFHQLPEFDQGKRSCRRRLAGHNERRRKPPPGSLLSTRYGRFSSSIF
Sbjct: 121 RFCQQCSRFHQLPEFDQGKRSCRRRLAGHNERRRKPPPGSLLSTRYGRFSSSIF 174

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BLAST of HG10019956 vs. NCBI nr
Match: XP_022954897.1 (squamosa promoter-binding-like protein 9 [Cucurbita moschata])

HSP 1 Score: 329.3 bits (843), Expect = 2.0e-86
Identity = 166/174 (95.40%), Postives = 169/174 (97.13%), Query Frame = 0


Query: 1   MEMDCSSLTESGGSSNSSPPNSSAESLNGLKFGQKIYFEDVGIGELPKSGGGSFSSSAVI 60
           MEMDCSSLTESGGS+ SSPP SSAESLNGLKFG KIYFEDVGIGELPKSGGGSFSSS VI
Sbjct: 12  MEMDCSSLTESGGSTTSSPPISSAESLNGLKFGHKIYFEDVGIGELPKSGGGSFSSSPVI 71

Query: 61  ASTPTKKPR-GGVVQAAQPPRCQVEGCRVDLSDAKAYYSRHKVCTMHSKSPKVIVAGLEQ 120
           ASTPTKKPR GGVVQAAQPPRCQVEGC+VDLSDAKAYYSRHKVCTMHSKSPKVIVAG+EQ
Sbjct: 72  ASTPTKKPRGGGVVQAAQPPRCQVEGCKVDLSDAKAYYSRHKVCTMHSKSPKVIVAGIEQ 131

Query: 121 RFCQQCSRFHQLPEFDQGKRSCRRRLAGHNERRRKPPPGSLLSTRYGRFSSSIF 174
           RFCQQCSRFHQLPEFDQGKRSCRRRLAGHNERRRKPPPGSLLSTRYGRFSSSIF
Sbjct: 132 RFCQQCSRFHQLPEFDQGKRSCRRRLAGHNERRRKPPPGSLLSTRYGRFSSSIF 185

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BLAST of HG10019956 vs. ExPASy Swiss-Prot
Match: Q700W2 (Squamosa promoter-binding-like protein 9 OS=Arabidopsis thaliana OX=3702 GN=SPL9 PE=2 SV=2)

HSP 1 Score: 183.7 bits (465), Expect = 1.7e-45
Identity = 104/167 (62.28%), Postives = 120/167 (71.86%), Query Frame = 0


Query: 10  ESGGSSNSSPPNSSAESLNGLKFGQKIYFEDVGIGELPKSGGGSFSSSAVIASTPTKKPR 69
           ESGGSS  S   S      GL FGQKIYFED         GGGS SSS+       ++ R
Sbjct: 17  ESGGSSTESSSFS-----GGLMFGQKIYFED--------GGGGSGSSSS--GGRSNRRVR 76

Query: 70  -GGVVQAAQPPRCQVEGCRVDLSDAKAYYSRHKVCTMHSKSPKVIVAGLEQRFCQQCSRF 129
            GG  Q+ Q PRCQVEGC +DL++AK YYSRH+VC +HSK+PKV VAG+EQRFCQQCSRF
Sbjct: 77  GGGSGQSGQIPRCQVEGCGMDLTNAKGYYSRHRVCGVHSKTPKVTVAGIEQRFCQQCSRF 136

Query: 130 HQLPEFDQGKRSCRRRLAGHNERRRKPPPGSL--LSTRYGRFSSSIF 174
           HQLPEFD  KRSCRRRLAGHNERRRKP P SL  L++RYGR + S++
Sbjct: 137 HQLPEFDLEKRSCRRRLAGHNERRRKPQPASLSVLASRYGRIAPSLY 168

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BLAST of HG10019956 vs. ExPASy Swiss-Prot
Match: A3C057 (Squamosa promoter-binding-like protein 17 OS=Oryza sativa subsp. japonica OX=39947 GN=SPL17 PE=2 SV=2)

HSP 1 Score: 176.0 bits (445), Expect = 3.6e-43
Identity = 95/165 (57.58%), Postives = 111/165 (67.27%), Query Frame = 0


Query: 11  SGGSSNSSPPNSSAESLNGLKFGQKIYFEDVGIGELPKSGGGSFSSSAVIASTPTKKPRG 70
           +GGS          + ++GLKFG+KIYFE         +   +  SS+  +    KK +G
Sbjct: 3   TGGSGGGGGGGGGGDDVHGLKFGKKIYFEQ---DAAASASAAAVESSSTSSGGGGKKGKG 62

Query: 71  GVVQAAQ----PPRCQVEGCRVDLSDAKAYYSRHKVCTMHSKSPKVIVAGLEQRFCQQCS 130
               AA     PPRCQVEGC VDLS  K YY RHKVC MH+K P V+VAGLEQRFCQQCS
Sbjct: 63  VAAAAAPPPPLPPRCQVEGCGVDLSGVKPYYCRHKVCYMHAKEPIVVVAGLEQRFCQQCS 122

Query: 131 RFHQLPEFDQGKRSCRRRLAGHNERRRKPPPGSLLSTRYGRFSSS 172
           RFHQLPEFDQ K+SCRRRLAGHNERRRKP PG  LS+RYGR ++S
Sbjct: 123 RFHQLPEFDQEKKSCRRRLAGHNERRRKPTPGP-LSSRYGRLAAS 163

[Close]

BLAST of HG10019956 vs. ExPASy Swiss-Prot
Match: Q7EXZ2 (Squamosa promoter-binding-like protein 14 OS=Oryza sativa subsp. japonica OX=39947 GN=SPL14 PE=2 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 6.2e-43
Identity = 100/178 (56.18%), Postives = 116/178 (65.17%), Query Frame = 0


Query: 12  GGSSNSSPPNSSAESLNGLKFGQKIYFEDVGIGE-LPKSGGGSFSSSAVIASTPTKKPRG 71
           GGS            L+GLKFG+KIYFED         +G GS S+SA   S+ +K   G
Sbjct: 18  GGSGGGGGGGDEHRQLHGLKFGKKIYFEDAAAAAGGGGTGSGSGSASAAPPSSSSKAAGG 77

Query: 72  -----------GVVQAA-----QPPRCQVEGCRVDLSDAKAYYSRHKVCTMHSKSPKVIV 131
                      GV  AA      PPRCQVEGC  DLS  K YY RHKVC MHSK+P+V+V
Sbjct: 78  GRGGGGKNKGKGVAAAAPPPPPPPPRCQVEGCGADLSGIKNYYCRHKVCFMHSKAPRVVV 137

Query: 132 AGLEQRFCQQCSRFHQLPEFDQGKRSCRRRLAGHNERRRKPPPGSLLSTRYGRFSSSI 173
           AGLEQRFCQQCSRFH LPEFDQGKRSCRRRLAGHNERRR+P   + L++RYGR ++S+
Sbjct: 138 AGLEQRFCQQCSRFHLLPEFDQGKRSCRRRLAGHNERRRRPQ--TPLASRYGRLAASV 193

[Close]

BLAST of HG10019956 vs. ExPASy Swiss-Prot
Match: Q9M2Q6 (Squamosa promoter-binding-like protein 15 OS=Arabidopsis thaliana OX=3702 GN=SPL15 PE=1 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 1.7e-40
Identity = 96/171 (56.14%), Postives = 114/171 (66.67%), Query Frame = 0


Query: 5   CSSLTESGGSSNSSPPNSSAESLNGLKFGQKIYFEDVGIGELPKSGGGSFSSSAVIASTP 64
           CS   ESGGSS++     S+    GL+FGQKIYFED         G GS S + V     
Sbjct: 6   CSGQAESGGSSST----ESSSLSGGLRFGQKIYFED---------GSGSRSKNRV----- 65

Query: 65  TKKPRGGVVQAAQPPRCQVEGCRVDLSDAKAYYSRHKVCTMHSKSPKVIVAGLEQRFCQQ 124
                  V +++   RCQVEGCR+DLS+ KAYYSRHKVC +HSKS KVIV+GL QRFCQQ
Sbjct: 66  -----NTVRKSSTTARCQVEGCRMDLSNVKAYYSRHKVCCIHSKSSKVIVSGLHQRFCQQ 125

Query: 125 CSRFHQLPEFDQGKRSCRRRLAGHNERRRKP-PPGSLLSTRYGRFSSSIFG 175
           CSRFHQL EFD  KRSCRRRLA HNERRRKP P  +L ++ Y R + S++G
Sbjct: 126 CSRFHQLSEFDLEKRSCRRRLACHNERRRKPQPTTALFTSHYSRIAPSLYG 153

[Close]

BLAST of HG10019956 vs. ExPASy Swiss-Prot
Match: S4WUL1 (Squamosa promoter-binding protein-like 15 OS=Arabis alpina OX=50452 GN=SPL15 PE=2 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 2.9e-40
Identity = 98/167 (58.68%), Postives = 115/167 (68.86%), Query Frame = 0


Query: 9   TESGGSSNSSPPNSSAESLNGLKFGQKIYFEDVGIGELPKSGGGSFSSSAVIASTPTKKP 68
           TESGGSS++     S+    GL+FGQKIYFED        SG GS SS   + +T  K  
Sbjct: 12  TESGGSSST----ESSSLSGGLRFGQKIYFED-------GSGSGSGSSKNRVHNTGRK-- 71

Query: 69  RGGVVQAAQPPRCQVEGCRVDLSDAKAYYSRHKVCTMHSKSPKVIVAGLEQRFCQQCSRF 128
                  +   RCQVEGCR+DL++AK+YYSRHKVC +HSKS KVIV+GL QRFCQQCSRF
Sbjct: 72  -------SLTARCQVEGCRMDLTNAKSYYSRHKVCCIHSKSSKVIVSGLPQRFCQQCSRF 131

Query: 129 HQLPEFDQGKRSCRRRLAGHNERRRKP-PPGSLLSTRYGRFSSSIFG 175
           H L EFD  KRSCRRRLA HNERRRKP    SLLS+RY R + S++G
Sbjct: 132 HLLSEFDLEKRSCRRRLACHNERRRKPQATTSLLSSRYARTAPSLYG 158

[Close]

BLAST of HG10019956 vs. ExPASy TrEMBL
Match: A0A0A0LBC1 (SBP-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G809420 PE=4 SV=1)

HSP 1 Score: 345.5 bits (885), Expect = 1.3e-91
Identity = 172/173 (99.42%), Postives = 173/173 (100.00%), Query Frame = 0


Query: 1   MEMDCSSLTESGGSSNSSPPNSSAESLNGLKFGQKIYFEDVGIGELPKSGGGSFSSSAVI 60
           MEMDCSSLTESGGSSNSSPPNSSAESLNGLKFGQKIYFEDVGIGELPKSGGGSFSSSAVI
Sbjct: 1   MEMDCSSLTESGGSSNSSPPNSSAESLNGLKFGQKIYFEDVGIGELPKSGGGSFSSSAVI 60

Query: 61  ASTPTKKPRGGVVQAAQPPRCQVEGCRVDLSDAKAYYSRHKVCTMHSKSPKVIVAGLEQR 120
           ASTPTKKPRGGVVQAAQPPRCQVEGCRVDL+DAKAYYSRHKVCTMHSKSPKVIVAGLEQR
Sbjct: 61  ASTPTKKPRGGVVQAAQPPRCQVEGCRVDLTDAKAYYSRHKVCTMHSKSPKVIVAGLEQR 120

Query: 121 FCQQCSRFHQLPEFDQGKRSCRRRLAGHNERRRKPPPGSLLSTRYGRFSSSIF 174
           FCQQCSRFHQLPEFDQGKRSCRRRLAGHNERRRKPPPGSLLSTRYGRFSSSIF
Sbjct: 121 FCQQCSRFHQLPEFDQGKRSCRRRLAGHNERRRKPPPGSLLSTRYGRFSSSIF 173

[Close]

BLAST of HG10019956 vs. ExPASy TrEMBL
Match: A0A1S3B7Z5 (squamosa promoter-binding-like protein 9 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103486778 PE=4 SV=1)

HSP 1 Score: 337.0 bits (863), Expect = 4.6e-89
Identity = 168/173 (97.11%), Postives = 169/173 (97.69%), Query Frame = 0


Query: 1   MEMDCSSLTESGGSSNSSPPNSSAESLNGLKFGQKIYFEDVGIGELPKSGGGSFSSSAVI 60
           MEMDCSSLTESGGSSNSSPPNSSAESLNGLKFGQKIYFEDVGI ELPKSGGGSFSSSAVI
Sbjct: 1   MEMDCSSLTESGGSSNSSPPNSSAESLNGLKFGQKIYFEDVGIAELPKSGGGSFSSSAVI 60

Query: 61  ASTPTKKPRGGVVQAAQPPRCQVEGCRVDLSDAKAYYSRHKVCTMHSKSPKVIVAGLEQR 120
           ASTPTKKPRGGVV  AQPPRCQVEGCRVDL+DAKAYYSRHKVCTMHSKSPKVIVAGLEQR
Sbjct: 61  ASTPTKKPRGGVVHPAQPPRCQVEGCRVDLTDAKAYYSRHKVCTMHSKSPKVIVAGLEQR 120

Query: 121 FCQQCSRFHQLPEFDQGKRSCRRRLAGHNERRRKPPPGSLLSTRYGRFSSSIF 174
           FCQQCSRFHQLPEFDQGKRSCRRRLAGHNERRRKPPPGSLLS RYGRFSSSIF
Sbjct: 121 FCQQCSRFHQLPEFDQGKRSCRRRLAGHNERRRKPPPGSLLSPRYGRFSSSIF 173

[Close]

BLAST of HG10019956 vs. ExPASy TrEMBL
Match: A0A6J1GS44 (squamosa promoter-binding-like protein 9 OS=Cucurbita moschata OX=3662 GN=LOC111456994 PE=4 SV=1)

HSP 1 Score: 329.3 bits (843), Expect = 9.5e-87
Identity = 166/174 (95.40%), Postives = 169/174 (97.13%), Query Frame = 0


Query: 1   MEMDCSSLTESGGSSNSSPPNSSAESLNGLKFGQKIYFEDVGIGELPKSGGGSFSSSAVI 60
           MEMDCSSLTESGGS+ SSPP SSAESLNGLKFG KIYFEDVGIGELPKSGGGSFSSS VI
Sbjct: 12  MEMDCSSLTESGGSTTSSPPISSAESLNGLKFGHKIYFEDVGIGELPKSGGGSFSSSPVI 71

Query: 61  ASTPTKKPR-GGVVQAAQPPRCQVEGCRVDLSDAKAYYSRHKVCTMHSKSPKVIVAGLEQ 120
           ASTPTKKPR GGVVQAAQPPRCQVEGC+VDLSDAKAYYSRHKVCTMHSKSPKVIVAG+EQ
Sbjct: 72  ASTPTKKPRGGGVVQAAQPPRCQVEGCKVDLSDAKAYYSRHKVCTMHSKSPKVIVAGIEQ 131

Query: 121 RFCQQCSRFHQLPEFDQGKRSCRRRLAGHNERRRKPPPGSLLSTRYGRFSSSIF 174
           RFCQQCSRFHQLPEFDQGKRSCRRRLAGHNERRRKPPPGSLLSTRYGRFSSSIF
Sbjct: 132 RFCQQCSRFHQLPEFDQGKRSCRRRLAGHNERRRKPPPGSLLSTRYGRFSSSIF 185

[Close]

BLAST of HG10019956 vs. ExPASy TrEMBL
Match: A0A6J1I8R4 (squamosa promoter-binding-like protein 9 OS=Cucurbita maxima OX=3661 GN=LOC111470202 PE=4 SV=1)

HSP 1 Score: 328.9 bits (842), Expect = 1.2e-86
Identity = 166/173 (95.95%), Postives = 169/173 (97.69%), Query Frame = 0


Query: 1   MEMDCSSLTESGGSSNSSPPNSSAESLNGLKFGQKIYFEDVGIGELPKSGGGSFSSSAVI 60
           MEMDCSSLTESGGS+ SSPP SSAESLNGLKFG KIYFEDVGIGELPKSGGGSFSSSAVI
Sbjct: 12  MEMDCSSLTESGGSTTSSPPISSAESLNGLKFGHKIYFEDVGIGELPKSGGGSFSSSAVI 71

Query: 61  ASTPTKKPR-GGVVQAAQPPRCQVEGCRVDLSDAKAYYSRHKVCTMHSKSPKVIVAGLEQ 120
           ASTPTKKPR GGVVQAAQPPRCQVEGC+VDLSDAKAYYSRHKVCTMHSKSPKVIVAG+EQ
Sbjct: 72  ASTPTKKPRGGGVVQAAQPPRCQVEGCKVDLSDAKAYYSRHKVCTMHSKSPKVIVAGIEQ 131

Query: 121 RFCQQCSRFHQLPEFDQGKRSCRRRLAGHNERRRKPPPGSLLSTRYGRFSSSI 173
           RFCQQCSRFHQLPEFDQGKRSCRRRLAGHNERRRKPPPGSLLSTRYGRFSSSI
Sbjct: 132 RFCQQCSRFHQLPEFDQGKRSCRRRLAGHNERRRKPPPGSLLSTRYGRFSSSI 184

[Close]

BLAST of HG10019956 vs. ExPASy TrEMBL
Match: A0A6J1F585 (squamosa promoter-binding-like protein 17 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111442278 PE=4 SV=1)

HSP 1 Score: 326.2 bits (835), Expect = 8.1e-86
Identity = 165/174 (94.83%), Postives = 167/174 (95.98%), Query Frame = 0


Query: 1   MEMDCSSLTESGGSSNSSPPNSSAESLNGLKFGQKIYFEDVGIGELPKS-GGGSFSSSAV 60
           MEMDCSSLTESGGSS SSPPNSSAESLNGLKFG KIYFEDVGIGELPKS GGGSFSSS +
Sbjct: 1   MEMDCSSLTESGGSSTSSPPNSSAESLNGLKFGHKIYFEDVGIGELPKSGGGGSFSSSPL 60

Query: 61  IASTPTKKPRGGVVQAAQPPRCQVEGCRVDLSDAKAYYSRHKVCTMHSKSPKVIVAGLEQ 120
           IASTPTKK RGGVVQ AQPPRCQVEGC+VDLSD KAYYSRHKVCTMHSKSPKVIVAGLEQ
Sbjct: 61  IASTPTKKLRGGVVQPAQPPRCQVEGCKVDLSDVKAYYSRHKVCTMHSKSPKVIVAGLEQ 120

Query: 121 RFCQQCSRFHQLPEFDQGKRSCRRRLAGHNERRRKPPPGSLLSTRYGRFSSSIF 174
           RFCQQCSRFHQLPEFDQGKRSCRRRLAGHNERRRKPPPGSLLSTRYGRFSSSIF
Sbjct: 121 RFCQQCSRFHQLPEFDQGKRSCRRRLAGHNERRRKPPPGSLLSTRYGRFSSSIF 174

[Close]

BLAST of HG10019956 vs. TAIR 10
Match: AT2G42200.1 (squamosa promoter binding protein-like 9 )

HSP 1 Score: 183.7 bits (465), Expect = 1.2e-46
Identity = 104/167 (62.28%), Postives = 120/167 (71.86%), Query Frame = 0


Query: 10  ESGGSSNSSPPNSSAESLNGLKFGQKIYFEDVGIGELPKSGGGSFSSSAVIASTPTKKPR 69
           ESGGSS  S   S      GL FGQKIYFED         GGGS SSS+       ++ R
Sbjct: 17  ESGGSSTESSSFS-----GGLMFGQKIYFED--------GGGGSGSSSS--GGRSNRRVR 76

Query: 70  -GGVVQAAQPPRCQVEGCRVDLSDAKAYYSRHKVCTMHSKSPKVIVAGLEQRFCQQCSRF 129
            GG  Q+ Q PRCQVEGC +DL++AK YYSRH+VC +HSK+PKV VAG+EQRFCQQCSRF
Sbjct: 77  GGGSGQSGQIPRCQVEGCGMDLTNAKGYYSRHRVCGVHSKTPKVTVAGIEQRFCQQCSRF 136

Query: 130 HQLPEFDQGKRSCRRRLAGHNERRRKPPPGSL--LSTRYGRFSSSIF 174
           HQLPEFD  KRSCRRRLAGHNERRRKP P SL  L++RYGR + S++
Sbjct: 137 HQLPEFDLEKRSCRRRLAGHNERRRKPQPASLSVLASRYGRIAPSLY 168

[Close]

BLAST of HG10019956 vs. TAIR 10
Match: AT3G57920.1 (squamosa promoter binding protein-like 15 )

HSP 1 Score: 167.2 bits (422), Expect = 1.2e-41
Identity = 96/171 (56.14%), Postives = 114/171 (66.67%), Query Frame = 0


Query: 5   CSSLTESGGSSNSSPPNSSAESLNGLKFGQKIYFEDVGIGELPKSGGGSFSSSAVIASTP 64
           CS   ESGGSS++     S+    GL+FGQKIYFED         G GS S + V     
Sbjct: 6   CSGQAESGGSSST----ESSSLSGGLRFGQKIYFED---------GSGSRSKNRV----- 65

Query: 65  TKKPRGGVVQAAQPPRCQVEGCRVDLSDAKAYYSRHKVCTMHSKSPKVIVAGLEQRFCQQ 124
                  V +++   RCQVEGCR+DLS+ KAYYSRHKVC +HSKS KVIV+GL QRFCQQ
Sbjct: 66  -----NTVRKSSTTARCQVEGCRMDLSNVKAYYSRHKVCCIHSKSSKVIVSGLHQRFCQQ 125

Query: 125 CSRFHQLPEFDQGKRSCRRRLAGHNERRRKP-PPGSLLSTRYGRFSSSIFG 175
           CSRFHQL EFD  KRSCRRRLA HNERRRKP P  +L ++ Y R + S++G
Sbjct: 126 CSRFHQLSEFDLEKRSCRRRLACHNERRRKPQPTTALFTSHYSRIAPSLYG 153

[Close]

BLAST of HG10019956 vs. TAIR 10
Match: AT5G43270.2 (squamosa promoter binding protein-like 2 )

HSP 1 Score: 142.1 bits (357), Expect = 4.1e-34
Identity = 75/138 (54.35%), Postives = 96/138 (69.57%), Query Frame = 0


Query: 23  SAESLNGLKFGQKIYFEDVGIGELPKSGG--GSFSSSAVIASTPTKKPRGGVVQAAQPPR 82
           S + + GLK G++ YFED    E  K  G   + +SS+V   +P KK +  + Q  Q P 
Sbjct: 113 SGDPVLGLKLGKRTYFEDFWEVENAKGLGLPVTLASSSV---SPVKKSK-SIPQRLQTPH 172

Query: 83  CQVEGCRVDLSDAKAYYSRHKVCTMHSKSPKVIVAGLEQRFCQQCSRFHQLPEFDQGKRS 142
           CQVEGC +DLS AK Y+ +H++C  HSK PKV+V+G+E+RFCQQCSRFH L EFD+ KRS
Sbjct: 173 CQVEGCNLDLSSAKDYHRKHRICENHSKFPKVVVSGVERRFCQQCSRFHCLSEFDEKKRS 232

Query: 143 CRRRLAGHNERRRKPPPG 159
           CRRRL+ HN RRRKP PG
Sbjct: 233 CRRRLSDHNARRRKPNPG 246

[Close]

BLAST of HG10019956 vs. TAIR 10
Match: AT5G43270.3 (squamosa promoter binding protein-like 2 )

HSP 1 Score: 142.1 bits (357), Expect = 4.1e-34
Identity = 75/138 (54.35%), Postives = 96/138 (69.57%), Query Frame = 0


Query: 23  SAESLNGLKFGQKIYFEDVGIGELPKSGG--GSFSSSAVIASTPTKKPRGGVVQAAQPPR 82
           S + + GLK G++ YFED    E  K  G   + +SS+V   +P KK +  + Q  Q P 
Sbjct: 113 SGDPVLGLKLGKRTYFEDFWEVENAKGLGLPVTLASSSV---SPVKKSK-SIPQRLQTPH 172

Query: 83  CQVEGCRVDLSDAKAYYSRHKVCTMHSKSPKVIVAGLEQRFCQQCSRFHQLPEFDQGKRS 142
           CQVEGC +DLS AK Y+ +H++C  HSK PKV+V+G+E+RFCQQCSRFH L EFD+ KRS
Sbjct: 173 CQVEGCNLDLSSAKDYHRKHRICENHSKFPKVVVSGVERRFCQQCSRFHCLSEFDEKKRS 232

Query: 143 CRRRLAGHNERRRKPPPG 159
           CRRRL+ HN RRRKP PG
Sbjct: 233 CRRRLSDHNARRRKPNPG 246

[Close]

BLAST of HG10019956 vs. TAIR 10
Match: AT5G43270.1 (squamosa promoter binding protein-like 2 )

HSP 1 Score: 142.1 bits (357), Expect = 4.1e-34
Identity = 75/138 (54.35%), Postives = 96/138 (69.57%), Query Frame = 0


Query: 23  SAESLNGLKFGQKIYFEDVGIGELPKSGG--GSFSSSAVIASTPTKKPRGGVVQAAQPPR 82
           S + + GLK G++ YFED    E  K  G   + +SS+V   +P KK +  + Q  Q P 
Sbjct: 113 SGDPVLGLKLGKRTYFEDFWEVENAKGLGLPVTLASSSV---SPVKKSK-SIPQRLQTPH 172

Query: 83  CQVEGCRVDLSDAKAYYSRHKVCTMHSKSPKVIVAGLEQRFCQQCSRFHQLPEFDQGKRS 142
           CQVEGC +DLS AK Y+ +H++C  HSK PKV+V+G+E+RFCQQCSRFH L EFD+ KRS
Sbjct: 173 CQVEGCNLDLSSAKDYHRKHRICENHSKFPKVVVSGVERRFCQQCSRFHCLSEFDEKKRS 232

Query: 143 CRRRLAGHNERRRKPPPG 159
           CRRRL+ HN RRRKP PG
Sbjct: 233 CRRRLSDHNARRRKPNPG 246

The following BLAST results are available for this feature:

BLAST of HG10019956 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004136576.1	2.7e-91	99.42	squamosa promoter-binding-like protein 9 [Cucumis sativus] >KGN59315.1 hypotheti...	[more]
XP_038905618.1	3.5e-91	98.84	squamosa promoter-binding-like protein 17 [Benincasa hispida]	[more]
XP_008443072.1	9.4e-89	97.11	PREDICTED: squamosa promoter-binding-like protein 9 isoform X1 [Cucumis melo]	[more]
KAG6596230.1	5.2e-87	95.98	Squamosa promoter-binding-like protein 9, partial [Cucurbita argyrosperma subsp....	[more]
XP_022954897.1	2.0e-86	95.40	squamosa promoter-binding-like protein 9 [Cucurbita moschata]	[more]

BLAST of HG10019956 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q700W2	1.7e-45	62.28	Squamosa promoter-binding-like protein 9 OS=Arabidopsis thaliana OX=3702 GN=SPL9...	[more]
A3C057	3.6e-43	57.58	Squamosa promoter-binding-like protein 17 OS=Oryza sativa subsp. japonica OX=399...	[more]
Q7EXZ2	6.2e-43	56.18	Squamosa promoter-binding-like protein 14 OS=Oryza sativa subsp. japonica OX=399...	[more]
Q9M2Q6	1.7e-40	56.14	Squamosa promoter-binding-like protein 15 OS=Arabidopsis thaliana OX=3702 GN=SPL...	[more]
S4WUL1	2.9e-40	58.68	Squamosa promoter-binding protein-like 15 OS=Arabis alpina OX=50452 GN=SPL15 PE=...	[more]

BLAST of HG10019956 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LBC1	1.3e-91	99.42	SBP-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G809420 PE...	[more]
A0A1S3B7Z5	4.6e-89	97.11	squamosa promoter-binding-like protein 9 isoform X1 OS=Cucumis melo OX=3656 GN=L...	[more]
A0A6J1GS44	9.5e-87	95.40	squamosa promoter-binding-like protein 9 OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A6J1I8R4	1.2e-86	95.95	squamosa promoter-binding-like protein 9 OS=Cucurbita maxima OX=3661 GN=LOC11147...	[more]
A0A6J1F585	8.1e-86	94.83	squamosa promoter-binding-like protein 17 isoform X1 OS=Cucurbita moschata OX=36...	[more]

BLAST of HG10019956 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G42200.1	1.2e-46	62.28	squamosa promoter binding protein-like 9	[more]
AT3G57920.1	1.2e-41	56.14	squamosa promoter binding protein-like 15	[more]
AT5G43270.2	4.1e-34	54.35	squamosa promoter binding protein-like 2	[more]
AT5G43270.3	4.1e-34	54.35	squamosa promoter binding protein-like 2	[more]
AT5G43270.1	4.1e-34	54.35	squamosa promoter binding protein-like 2	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004333	SBP domain	PFAM	PF03110	SBP	coord: 81..154 e-value: 4.9E-33 score: 113.3
IPR004333	SBP domain	PROSITE	PS51141	ZF_SBP	coord: 78..155 score: 32.555977
IPR036893	SBP domain superfamily	GENE3D	4.10.1100.10		coord: 71..142 e-value: 1.3E-34 score: 120.2
IPR036893	SBP domain superfamily	SUPERFAMILY	103612	SBT domain	coord: 78..159
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..27
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 144..174
None	No IPR available	PANTHER	PTHR31251:SF128	SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 17	coord: 1..173
IPR044817	Squamosa promoter-binding-like protein	PANTHER	PTHR31251	SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4	coord: 1..173

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10019956.1	HG10019956.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046872	metal ion binding