HG10019893 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10019893
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionprotein PLANT CADMIUM RESISTANCE 10
LocationChr04: 26577608 .. 26581799 (+)
RNA-Seq ExpressionHG10019893
SyntenyHG10019893
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTCTTAATGAAGCTTACAGATTGGATTTGTTTGGAAGAAATTGGGAGGAATACGTTGTGTATCAGCGCAAGATGGATGGCCGAAGGAGTTATGTCCCTCCTGCATATGTTCCACTAGGCCAGTCTGATTCAGAAGCGGAGATCATTTCCAGAGATGAGAGCCACCCCACACCTGATGAACTTAAGGACGGGTTGTCACAATGGTCGTCTGGAATCTGTGCATGCTGCGATGATATGCAGAGCTGTACGCTACTTTCTGCCTTCTGACCTTGATTTATGCGAAGGAAAAATTATGAAGGTGCATCTTGAGTATGGAAAGGAAATGTATCATTACTTTGCATATGTTCTTGTATCAAAATTTAAACATTTGAATTGTAGGCTAGTGGTTGTTTCCATTAGGGAACCTTTCATATCCTTTCGTAAATATAAGCATGCCGTGTCATTTGTTTGTTGAGTGTTCTTTGATCTTTGATAGAAACTTTGTTGTTGTGAACCAGCTACTTCTGTCAAGCGGAACCACTGGATTTTGCACTATGATTAGGTTTATTATGGGAAACCAGATCAACCCTAAATGTTGGGAATAGTGCTTGAAGAACTTCAAATTTAGTTAAAGGGTGATCAAGAAATCCTTCAGACTAACTACCGGGGGGTTACATATTTTGTTAGTTCTCTAACTATTACATGTTGTATGATCAGTTAGAGTCTCTAGTTTCCATTTCTTGTTCTTTTTTTCCAAAAAAAGTTGAGTTGCTAGTTTCTATCATTGAAGTGTGTATAAGGATTCTCAGATTGTGGGCATAAAGTATTTGAAATAAAACAGGACACTTGATCTTGTGCACCTTTAGTTTGTTAGAAACCAAGTAGCATTTAGGTGATATGAAAAAAAACCCTTTTTTCCTTTTTTTTTGGTGTGTGTGTGTGAAATGAATAGGTTGCATATTACTGTTGACAGTAGTATGATTCGAGTATAAGAGCATTGCATTTATAGTGGTCCATCTCTAGCATGTTAAATGGGGAGCTCATTGCACCTTTTTCTGGGTGCAGGTGTTATTGGCCTTTTTTGTCCATGCTTTCTGTTTGGGAAGAATGCAGAACTTTTGGGTTCTCGGACGATGTTTGGGTCATGCGCAACTCATTTCATTTTGTGGGCACTTATGAATACAGTCTGCTGCCTATTGACTGATGGAGTTTTGTGGAATATACCTGGATGCTTTCTTGCATGTTATGCTTGTGGCTACCGCAAGGCCCTGCGGTCGAAGTACAATTTGCCAGTATAATATCTTACTCTTTTCACTTTTTCATTTCATATTTCCATTATGCCTCAACTATCCATTTGTTCATGGTTTTTTAAGATTATACATACTATCACTATGTCATGCATTGATCATTTCTTCTTCTACTGATCTATCATGCTTAAGAAATGTCAAAGCATTAAGTAGCTTTTGTTTTTTAGGTTTGTCTCTGGACAAGGCAGGGAACTGGCTCTAAGGCCTTCACCCCTGCCATATAATGTAGCTCAGCTCTCTACAATTTGGTTTCTTTTTAAGCTTAGTCGACGAGTTAACTCGCCTGTTGCTATTTTTCCACGAGCCACACATTTTTAATTTCTGAAATGTGATGCAGGAAGCACCTTGTGGAGATTTTGTGACCCACTTTTTCTGCCATTTCTGTGCTATCTGTCAAGAATATAGAGAGATTCGTGAAAGAGCTGGTGGATCCGGTTCCCATGAGTTGAATCTGGCTGTTGTTACCCCGCCAACGACTCAAACAATGGAATCTAACCTGGAAACATAGTTGCTTCATTGCTGGAGCTTCCGAGGAATATCGGTAATTTATCAGATTGCTTGCTTAGCACGGAGTCCCTTCTTCCCTCTTCTAATGGGATTTTTCTAAGTTACTACTTTTACTCTTCTATTATTATGGGATTTTCCCCTTCTTTCGTCTAGTTTAATAGTAGTGTTAGAAAATCAGTTATAGTAGTGATTGATAAATTTTTGTTTTGTTTTGTTTATTTTTTATTCTTTTTATTTTGAACATGGATATATGAGTTGTAATGTTTGGTAAGTTAATATTTACATTACGTTGATTTTACTGTTTGTTTGATGCTGCACACGAAGAAAAGAATCACAATGTTGGTCTTTTAGATTCATAGTTTATAAATATAGGTGATGTTTTATTATGAAAGTGGGCAATGCTTTTTTAGAACATTACATACACAGCTTGGTGATTGTAAATCTGTTGCTTCTGCCAACAAATAGAATTATATTACATCAATCCATACTTTAAAAATTACTATTTTTAAATAATCACGAGTGCTTGTCTTGACTATACTCACAGGACAACTTACCGCCCAAAACCAATATTCAAAACTTGATTTTTTTTGCTGCACTACCTTGTTTTGCTTTGAGGCACCCAACATAGAATTGTTTTAAGCCAAACACATTTAATTTTGGAGTTCTTATGGTTGAGCCACGAAAAAGTATGGTGCATCTTGTTAGCATAAGTAGTAATTATCAATTCCTTTAAACTTCTCAACTACATTTGCATGTATTCTCATGATCTCTCTTTTTCGGATGTAGTCTCAATTAATGTATCTCTAAGTAAATGTCACATGTCCACAAGCTTTCACCTTGGTTCTGACCTATATCCATTTTTTACTTTTACAACTTTATAATTGATTGAAAATACTGTTATTATCGTTCGTATTACAACATCATTGACAACATTATTCACATACTCCGTTTTTATGGCATGGAGCTGCCATATCACTTTAGTTAGATGAAATAGTGTACTCTTTCTAATATTACCATGTTAGTTTTCATCAATTATTTCAACAAAAGTAATTCTCGATAAGAGTGTTCTCTTTAACAACTTCAAATGGAAATAACTCTCAAACTACTCATATATTAATAATTAATGATGTTTTCATAGTTGATAGAGATCATCTGGAGCCGATATGTCAATATGTGAGCGAAAATAAATATTATATCCTTAACCCAAAAAGTCATACGTAAGATTATTTTCCATTCTCTGAAAAGTTGTTTTCCATTCTCTGAAAAGTTGTTGAACTAAAAAAAATAGACCTGTTAGAGTATTTAATATCATTTGTTATAGTGTTTTATATTATGTTGTCATGTTATTTAATTTCTGTTTATTCTATGTGTAAAAGTTTATTTAGCCTCTTTTAGTTATTTAGCATTTTTTAGTATCGTAGTATTTAATTGCTTATTTCAATATCATTGTAGTATGGCTGAAACCTTAATAGACAACTTCCATTGTTCTATCTCTTTATCTCTCTCTATTTCTCTTGAGGATCTAAGGTAGATCCACCCTGTAATGATTATTAGAAATTATAGTATAAACTTGAGGTTGGTCTTTTCAAAAAAAAAAAAAAAAAAAAACTTGAAATTGGTAGAGTGGGCTATTAATAGTTCACTCTATATTAAGACTTCAAATATAATAGTGATGTTTACAACTATTTATAAATTACAATTATCTATTATAATACTATTTGAAATCTTTTCTTGTTACAGTATTTACCATTTTAATACAAAAAATTATAATCCAGACTAAAACAATCAAATTATTATATTTATAATAACTAATTCAATGCCGCCTTTGAAAAATATTATATCTTAAATAGACCAACAGCTTTCAAATTTTTACTCCGTATCATCAAATTTTAGAAGATAAAATTTAGTGACAAGAACTATAAAGCACATCTGCGTGTTGTATCAATGGCCAACAGGCTGCCACATTGGTAGCTCCTTGGCAATCATCAAGCTCTACAAATGCCAACCAACCAAAAAAAAAAAACTCAAAACTCCCAACACTATAAATAGCCATAATAACAATAATAACAATAAATTAATTAATAATTCCCTTTCAGCCTTCAACTGAAAAACTGCCCCAACAATTCCCTTATTATTCCTACATGGCCTCTCCATCCAGGCTTTTCCTTTGCTTTTGTTTTTTCATTTTCTTGATAAGCAGTAGCCTTGCGGCTGTGCAGCAGCCCAACGGCGGCGGTGGTGGCGGAGGAGGCGGGGGAGGGTCCGGAAGTGGTTCGAGTAGTGGTTCCGGTTCAGCTTCTGGGTCCGGCTCCGGCTCCGGAAGTGGCGGCGGGTCCGGTTCGAGTGGAGTGTCTCCTCAGACTGTTGGCTTGAACCACAGGAAGGCCTCTCCCTGA

mRNA sequence

ATGATTCTTAATGAAGCTTACAGATTGGATTTGTTTGGAAGAAATTGGGAGGAATACGTTGTGTATCAGCGCAAGATGGATGGCCGAAGGAGTTATGTCCCTCCTGCATATGTTCCACTAGGCCAGTCTGATTCAGAAGCGGAGATCATTTCCAGAGATGAGAGCCACCCCACACCTGATGAACTTAAGGACGGGTTGTCACAATGGTCGTCTGGAATCTGTGCATGCTGCGATGATATGCAGAGCTGTGTTATTGGCCTTTTTTGTCCATGCTTTCTGTTTGGGAAGAATGCAGAACTTTTGGGTTCTCGGACGATGTTTGGGTCATGCGCAACTCATTTCATTTTGTGGGCACTTATGAATACAGTCTGCTGCCTATTGACTGATGGAGTTTTGTGGAATATACCTGGATGCTTTCTTGCATGTTATGCTTGTGGCTACCGCAAGGCCCTGCGGTCGAATAGCCTTGCGGCTGTGCAGCAGCCCAACGGCGGCGGTGGTGGCGGAGGAGGCGGGGGAGGGTCCGGAAGTGGTTCGAGTAGTGGTTCCGGTTCAGCTTCTGGGTCCGGCTCCGGCTCCGGAAGTGGCGGCGGGTCCGGTTCGAGTGGAGTGTCTCCTCAGACTGTTGGCTTGAACCACAGGAAGGCCTCTCCCTGA

Coding sequence (CDS)

ATGATTCTTAATGAAGCTTACAGATTGGATTTGTTTGGAAGAAATTGGGAGGAATACGTTGTGTATCAGCGCAAGATGGATGGCCGAAGGAGTTATGTCCCTCCTGCATATGTTCCACTAGGCCAGTCTGATTCAGAAGCGGAGATCATTTCCAGAGATGAGAGCCACCCCACACCTGATGAACTTAAGGACGGGTTGTCACAATGGTCGTCTGGAATCTGTGCATGCTGCGATGATATGCAGAGCTGTGTTATTGGCCTTTTTTGTCCATGCTTTCTGTTTGGGAAGAATGCAGAACTTTTGGGTTCTCGGACGATGTTTGGGTCATGCGCAACTCATTTCATTTTGTGGGCACTTATGAATACAGTCTGCTGCCTATTGACTGATGGAGTTTTGTGGAATATACCTGGATGCTTTCTTGCATGTTATGCTTGTGGCTACCGCAAGGCCCTGCGGTCGAATAGCCTTGCGGCTGTGCAGCAGCCCAACGGCGGCGGTGGTGGCGGAGGAGGCGGGGGAGGGTCCGGAAGTGGTTCGAGTAGTGGTTCCGGTTCAGCTTCTGGGTCCGGCTCCGGCTCCGGAAGTGGCGGCGGGTCCGGTTCGAGTGGAGTGTCTCCTCAGACTGTTGGCTTGAACCACAGGAAGGCCTCTCCCTGA

Protein sequence

MILNEAYRLDLFGRNWEEYVVYQRKMDGRRSYVPPAYVPLGQSDSEAEIISRDESHPTPDELKDGLSQWSSGICACCDDMQSCVIGLFCPCFLFGKNAELLGSRTMFGSCATHFILWALMNTVCCLLTDGVLWNIPGCFLACYACGYRKALRSNSLAAVQQPNGGGGGGGGGGGSGSGSSSGSGSASGSGSGSGSGGGSGSSGVSPQTVGLNHRKASP
Homology
[Close]
BLAST of HG10019893 vs. NCBI nr
Match: KAE8651159.1 (hypothetical protein Csa_002610 [Cucumis sativus])

HSP 1 Score: 287.7 bits (735), Expect = 8.2e-74
Identity = 131/145 (90.34%), Postives = 137/145 (94.48%), Query Frame = 0 

Query: 9   LDLFGRNWEEYVVYQRKMDGRRSYVPPAYVPLGQSDSEAEIISRDESHPTPDELKDGLSQ 68
           LD F RNWEEYVVYQRKMDG RSYVPPAYVP+ QSD EAEI SRDES+PTP+ELKDGLSQ
Sbjct: 82  LDSFERNWEEYVVYQRKMDGPRSYVPPAYVPISQSDLEAEISSRDESNPTPNELKDGLSQ 141

Query: 69  WSSGICACCDDMQSCVIGLFCPCFLFGKNAELLGSRTMFGSCATHFILWALMNTVCCLLT 128
           WSSGICACCDDMQSC IGLFCPCFLFGKNAELLGSRTMFGSCATHFILWAL NTVCCLL+
Sbjct: 142 WSSGICACCDDMQSCFIGLFCPCFLFGKNAELLGSRTMFGSCATHFILWALTNTVCCLLS 201

Query: 129 DGVLWNIPGCFLACYACGYRKALRS 154
           DG+LWN+PGCFLACYACGYRKALRS
Sbjct: 202 DGILWNVPGCFLACYACGYRKALRS 226

[Close]
BLAST of HG10019893 vs. NCBI nr
Match: XP_038903486.1 (protein PLANT CADMIUM RESISTANCE 10 [Benincasa hispida])

HSP 1 Score: 272.7 bits (696), Expect = 2.7e-69
Identity = 125/128 (97.66%), Postives = 126/128 (98.44%), Query Frame = 0 

Query: 26  MDGRRSYVPPAYVPLGQSDSEAEIISRDESHPTPDELKDGLSQWSSGICACCDDMQSCVI 85
           MDGRRSYVPPAYVPLGQSDSEAEIISRDES PTPDELKDGLSQWSSGICACCDDMQSC I
Sbjct: 1   MDGRRSYVPPAYVPLGQSDSEAEIISRDESQPTPDELKDGLSQWSSGICACCDDMQSCFI 60

Query: 86  GLFCPCFLFGKNAELLGSRTMFGSCATHFILWALMNTVCCLLTDGVLWNIPGCFLACYAC 145
           GLFCPCFLFGKNAELLGSRTMFGSCATHFILWALMNTVCCLLTDGVLWN+PGCFLACYAC
Sbjct: 61  GLFCPCFLFGKNAELLGSRTMFGSCATHFILWALMNTVCCLLTDGVLWNVPGCFLACYAC 120

Query: 146 GYRKALRS 154
           GYRKALRS
Sbjct: 121 GYRKALRS 128

[Close]
BLAST of HG10019893 vs. NCBI nr
Match: XP_004136605.1 (protein PLANT CADMIUM RESISTANCE 10 [Cucumis sativus])

HSP 1 Score: 256.5 bits (654), Expect = 2.0e-64
Identity = 116/128 (90.62%), Postives = 122/128 (95.31%), Query Frame = 0 

Query: 26  MDGRRSYVPPAYVPLGQSDSEAEIISRDESHPTPDELKDGLSQWSSGICACCDDMQSCVI 85
           MDG RSYVPPAYVP+ QSD EAEI SRDES+PTP+ELKDGLSQWSSGICACCDDMQSC I
Sbjct: 1   MDGPRSYVPPAYVPISQSDLEAEISSRDESNPTPNELKDGLSQWSSGICACCDDMQSCFI 60

Query: 86  GLFCPCFLFGKNAELLGSRTMFGSCATHFILWALMNTVCCLLTDGVLWNIPGCFLACYAC 145
           GLFCPCFLFGKNAELLGSRTMFGSCATHFILWAL NTVCCLL+DG+LWN+PGCFLACYAC
Sbjct: 61  GLFCPCFLFGKNAELLGSRTMFGSCATHFILWALTNTVCCLLSDGILWNVPGCFLACYAC 120

Query: 146 GYRKALRS 154
           GYRKALRS
Sbjct: 121 GYRKALRS 128

[Close]
BLAST of HG10019893 vs. NCBI nr
Match: KAG7017604.1 (Protein PLANT CADMIUM RESISTANCE 10, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 255.4 bits (651), Expect = 4.5e-64
Identity = 117/136 (86.03%), Postives = 122/136 (89.71%), Query Frame = 0 

Query: 18  EYVVYQRKMDGRRSYVPPAYVPLGQSDSEAEIISRDESHPTPDELKDGLSQWSSGICACC 77
           EYV YQRKMDG RSYVPPAYVP+GQS SEAEIIS+DE HP P+EL D LSQWSSGICACC
Sbjct: 1   EYVEYQRKMDGHRSYVPPAYVPIGQSVSEAEIISKDEGHPIPNELNDELSQWSSGICACC 60

Query: 78  DDMQSCVIGLFCPCFLFGKNAELLGSRTMFGSCATHFILWALMNTVCCLLTDGVLWNIPG 137
           DDMQSC IGL CPCFLFGKNA LLGS+TMFGSCATHFILWALMN VCCL TDG LWN+ G
Sbjct: 61  DDMQSCFIGLCCPCFLFGKNAALLGSQTMFGSCATHFILWALMNAVCCLSTDGALWNVAG 120

Query: 138 CFLACYACGYRKALRS 154
           CFLACYACGYRKALRS
Sbjct: 121 CFLACYACGYRKALRS 136

[Close]
BLAST of HG10019893 vs. NCBI nr
Match: XP_008443175.1 (PREDICTED: protein PLANT CADMIUM RESISTANCE 10 [Cucumis melo])

HSP 1 Score: 254.6 bits (649), Expect = 7.7e-64
Identity = 114/128 (89.06%), Postives = 123/128 (96.09%), Query Frame = 0 

Query: 26  MDGRRSYVPPAYVPLGQSDSEAEIISRDESHPTPDELKDGLSQWSSGICACCDDMQSCVI 85
           MDG RSYVPPAYVP+ QSDSE EIISRDES+PTP++LKDGLSQWSSGICACCDDMQSC I
Sbjct: 1   MDGPRSYVPPAYVPISQSDSETEIISRDESNPTPNQLKDGLSQWSSGICACCDDMQSCFI 60

Query: 86  GLFCPCFLFGKNAELLGSRTMFGSCATHFILWALMNTVCCLLTDGVLWNIPGCFLACYAC 145
           GLFCPCFLFGKNAELLGS+T+FGSCATHFILWAL NTVCCLL+DG+LWN+PGCFLACYAC
Sbjct: 61  GLFCPCFLFGKNAELLGSQTIFGSCATHFILWALTNTVCCLLSDGLLWNVPGCFLACYAC 120

Query: 146 GYRKALRS 154
           GYRKALRS
Sbjct: 121 GYRKALRS 128

[Close]
BLAST of HG10019893 vs. ExPASy Swiss-Prot
Match: Q8S8T8 (Protein PLANT CADMIUM RESISTANCE 10 OS=Arabidopsis thaliana OX=3702 GN=PCR10 PE=2 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 1.6e-40
Identity = 74/124 (59.68%), Postives = 93/124 (75.00%), Query Frame = 0 

Query: 32  YVPPAYVPLGQSDSEAEI--ISRDESHPTPDELKDGLSQWSSGICACCDDMQSCVIGLFC 91
           YVPP+Y+PL QSD++ E+   + +      +  KD   QWSSGICAC DDMQSC +GLFC
Sbjct: 8   YVPPSYIPLTQSDADTEVETTTPNLEIAVSESTKDDPRQWSSGICACFDDMQSCCVGLFC 67

Query: 92  PCFLFGKNAELLGSRTMFGSCATHFILWALMNTVCCLLTDGVLWNIPGCFLACYACGYRK 151
           PC++FGKNAELLGS T  G C TH I WAL+NT+CC  T+G L  +PGCF++CYACGYRK
Sbjct: 68  PCYIFGKNAELLGSGTFAGPCLTHCISWALVNTICCFATNGALLGLPGCFVSCYACGYRK 127

Query: 152 ALRS 154
           +LR+
Sbjct: 128 SLRA 131

[Close]
BLAST of HG10019893 vs. ExPASy Swiss-Prot
Match: B4FF80 (Cell number regulator 5 OS=Zea mays OX=4577 GN=CNR5 PE=2 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 2.2e-37
Identity = 71/129 (55.04%), Postives = 93/129 (72.09%), Query Frame = 0 

Query: 26  MDGRRSYVPPAYVPLGQSDSEAE-IISRDESHPTPDELKDGLSQWSSGICACCDDMQSCV 85
           M G+ SYVPP Y+PL   D+E + + + +E+H T  +L    +QWSSGICAC DD QSC 
Sbjct: 1   MAGKGSYVPPQYIPLYSLDTEEDRVPAVEENHATRPKLNQDPTQWSSGICACFDDPQSCC 60

Query: 86  IGLFCPCFLFGKNAELLGSRTMFGSCATHFILWALMNTVCCLLTDGVLWNIPGCFLACYA 145
           IG  CPCFLFGKNA+ LGS T+ GSC TH +LW L+ ++CC+ T G++  +PG  +ACYA
Sbjct: 61  IGAICPCFLFGKNAQFLGSGTLAGSCTTHCMLWGLLTSLCCVFTGGLVLAVPGSAVACYA 120

Query: 146 CGYRKALRS 154
           CGYR ALR+
Sbjct: 121 CGYRSALRT 129

[Close]
BLAST of HG10019893 vs. ExPASy TrEMBL
Match: A0A0A0LH64 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G815450 PE=4 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 9.8e-65
Identity = 116/128 (90.62%), Postives = 122/128 (95.31%), Query Frame = 0 

Query: 26  MDGRRSYVPPAYVPLGQSDSEAEIISRDESHPTPDELKDGLSQWSSGICACCDDMQSCVI 85
           MDG RSYVPPAYVP+ QSD EAEI SRDES+PTP+ELKDGLSQWSSGICACCDDMQSC I
Sbjct: 1   MDGPRSYVPPAYVPISQSDLEAEISSRDESNPTPNELKDGLSQWSSGICACCDDMQSCFI 60

Query: 86  GLFCPCFLFGKNAELLGSRTMFGSCATHFILWALMNTVCCLLTDGVLWNIPGCFLACYAC 145
           GLFCPCFLFGKNAELLGSRTMFGSCATHFILWAL NTVCCLL+DG+LWN+PGCFLACYAC
Sbjct: 61  GLFCPCFLFGKNAELLGSRTMFGSCATHFILWALTNTVCCLLSDGILWNVPGCFLACYAC 120

Query: 146 GYRKALRS 154
           GYRKALRS
Sbjct: 121 GYRKALRS 128

[Close]
BLAST of HG10019893 vs. ExPASy TrEMBL
Match: A0A1S3B7G5 (protein PLANT CADMIUM RESISTANCE 10 OS=Cucumis melo OX=3656 GN=LOC103486838 PE=4 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 3.7e-64
Identity = 114/128 (89.06%), Postives = 123/128 (96.09%), Query Frame = 0 

Query: 26  MDGRRSYVPPAYVPLGQSDSEAEIISRDESHPTPDELKDGLSQWSSGICACCDDMQSCVI 85
           MDG RSYVPPAYVP+ QSDSE EIISRDES+PTP++LKDGLSQWSSGICACCDDMQSC I
Sbjct: 1   MDGPRSYVPPAYVPISQSDSETEIISRDESNPTPNQLKDGLSQWSSGICACCDDMQSCFI 60

Query: 86  GLFCPCFLFGKNAELLGSRTMFGSCATHFILWALMNTVCCLLTDGVLWNIPGCFLACYAC 145
           GLFCPCFLFGKNAELLGS+T+FGSCATHFILWAL NTVCCLL+DG+LWN+PGCFLACYAC
Sbjct: 61  GLFCPCFLFGKNAELLGSQTIFGSCATHFILWALTNTVCCLLSDGLLWNVPGCFLACYAC 120

Query: 146 GYRKALRS 154
           GYRKALRS
Sbjct: 121 GYRKALRS 128

[Close]
BLAST of HG10019893 vs. ExPASy TrEMBL
Match: A0A6J1I689 (protein PLANT CADMIUM RESISTANCE 10-like OS=Cucurbita maxima OX=3661 GN=LOC111470294 PE=4 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 1.7e-61
Identity = 116/129 (89.92%), Postives = 119/129 (92.25%), Query Frame = 0 

Query: 26  MDGRRSYVPPAYVPLGQSDSEAEIISRDES-HPTPDELKDGLSQWSSGICACCDDMQSCV 85
           MDG  SYVPPAYVPLGQSDSEAEIISRDE  H TP+ELKDGLSQWSSGICACCDDMQSC 
Sbjct: 1   MDGGISYVPPAYVPLGQSDSEAEIISRDEGIHSTPNELKDGLSQWSSGICACCDDMQSCF 60

Query: 86  IGLFCPCFLFGKNAELLGSRTMFGSCATHFILWALMNTVCCLLTDGVLWNIPGCFLACYA 145
           IGLFCPCFLFGKNAELLGSRTMFGSCATHFILWAL NTVCCLLTDG+  N+PGC LACYA
Sbjct: 61  IGLFCPCFLFGKNAELLGSRTMFGSCATHFILWALTNTVCCLLTDGLFLNLPGCVLACYA 120

Query: 146 CGYRKALRS 154
           CGYRKALRS
Sbjct: 121 CGYRKALRS 129

[Close]
BLAST of HG10019893 vs. ExPASy TrEMBL
Match: A0A6J1GI45 (protein PLANT CADMIUM RESISTANCE 10-like OS=Cucurbita moschata OX=3662 GN=LOC111454399 PE=4 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 3.9e-61
Identity = 116/129 (89.92%), Postives = 119/129 (92.25%), Query Frame = 0 

Query: 26  MDGRRSYVPPAYVPLGQSDSEAEIISRDE-SHPTPDELKDGLSQWSSGICACCDDMQSCV 85
           MDG  SYVPPAYVPLGQSDSEAEIISRDE SH TP+ELKDGLSQWSSGICACCDDMQSC 
Sbjct: 1   MDGGISYVPPAYVPLGQSDSEAEIISRDEGSHSTPNELKDGLSQWSSGICACCDDMQSCF 60

Query: 86  IGLFCPCFLFGKNAELLGSRTMFGSCATHFILWALMNTVCCLLTDGVLWNIPGCFLACYA 145
           IGL CPCFLFGKNAELLGSRTMFGSCATHFILWAL NTVCCLLTDG+  N+PGC LACYA
Sbjct: 61  IGLVCPCFLFGKNAELLGSRTMFGSCATHFILWALTNTVCCLLTDGLFLNLPGCVLACYA 120

Query: 146 CGYRKALRS 154
           CGYRKALRS
Sbjct: 121 CGYRKALRS 129

[Close]
BLAST of HG10019893 vs. ExPASy TrEMBL
Match: A0A6J1F1V0 (protein PLANT CADMIUM RESISTANCE 10-like OS=Cucurbita moschata OX=3662 GN=LOC111441625 PE=4 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 8.6e-61
Identity = 111/128 (86.72%), Postives = 115/128 (89.84%), Query Frame = 0 

Query: 26  MDGRRSYVPPAYVPLGQSDSEAEIISRDESHPTPDELKDGLSQWSSGICACCDDMQSCVI 85
           MDG RSYVPPAYVP+GQS SEAEIIS+DE HP P+EL D LSQWSSGICACCDDMQSC I
Sbjct: 1   MDGHRSYVPPAYVPIGQSVSEAEIISKDEGHPIPNELNDELSQWSSGICACCDDMQSCFI 60

Query: 86  GLFCPCFLFGKNAELLGSRTMFGSCATHFILWALMNTVCCLLTDGVLWNIPGCFLACYAC 145
           GL CPCFLFGKNA LLGSRTMFGSCATHFILWALMN VCCL TDG LWN+ GCFLACYAC
Sbjct: 61  GLCCPCFLFGKNAALLGSRTMFGSCATHFILWALMNAVCCLSTDGALWNVAGCFLACYAC 120

Query: 146 GYRKALRS 154
           GYRKALRS
Sbjct: 121 GYRKALRS 128

[Close]
BLAST of HG10019893 vs. TAIR 10
Match: AT2G40935.1 (PLAC8 family protein )

HSP 1 Score: 167.5 bits (423), Expect = 1.2e-41
Identity = 74/124 (59.68%), Postives = 93/124 (75.00%), Query Frame = 0 

Query: 32  YVPPAYVPLGQSDSEAEI--ISRDESHPTPDELKDGLSQWSSGICACCDDMQSCVIGLFC 91
           YVPP+Y+PL QSD++ E+   + +      +  KD   QWSSGICAC DDMQSC +GLFC
Sbjct: 8   YVPPSYIPLTQSDADTEVETTTPNLEIAVSESTKDDPRQWSSGICACFDDMQSCCVGLFC 67

Query: 92  PCFLFGKNAELLGSRTMFGSCATHFILWALMNTVCCLLTDGVLWNIPGCFLACYACGYRK 151
           PC++FGKNAELLGS T  G C TH I WAL+NT+CC  T+G L  +PGCF++CYACGYRK
Sbjct: 68  PCYIFGKNAELLGSGTFAGPCLTHCISWALVNTICCFATNGALLGLPGCFVSCYACGYRK 127

Query: 152 ALRS 154
           +LR+
Sbjct: 128 SLRA 131

[Close]
BLAST of HG10019893 vs. TAIR 10
Match: AT2G40935.3 (PLAC8 family protein )

HSP 1 Score: 137.5 bits (345), Expect = 1.3e-32
Identity = 64/124 (51.61%), Postives = 83/124 (66.94%), Query Frame = 0 

Query: 32  YVPPAYVPLGQSDSEAEI--ISRDESHPTPDELKDGLSQWSSGICACCDDMQSCVIGLFC 91
           YVPP+Y+PL QSD++ E+   + +      +  KD   QWSSG            +GLFC
Sbjct: 8   YVPPSYIPLTQSDADTEVETTTPNLEIAVSESTKDDPRQWSSG-----------CVGLFC 67

Query: 92  PCFLFGKNAELLGSRTMFGSCATHFILWALMNTVCCLLTDGVLWNIPGCFLACYACGYRK 151
           PC++FGKNAELLGS T  G C TH I WAL+NT+CC  T+G L  +PGCF++CYACGYRK
Sbjct: 68  PCYIFGKNAELLGSGTFAGPCLTHCISWALVNTICCFATNGALLGLPGCFVSCYACGYRK 120

Query: 152 ALRS 154
           +LR+
Sbjct: 128 SLRA 120

[Close]
BLAST of HG10019893 vs. TAIR 10
Match: AT2G40935.2 (PLAC8 family protein )

HSP 1 Score: 113.2 bits (282), Expect = 2.6e-25
Identity = 46/69 (66.67%), Postives = 57/69 (82.61%), Query Frame = 0 

Query: 85  IGLFCPCFLFGKNAELLGSRTMFGSCATHFILWALMNTVCCLLTDGVLWNIPGCFLACYA 144
           +GLFCPC++FGKNAELLGS T  G C TH I WAL+NT+CC  T+G L  +PGCF++CYA
Sbjct: 39  VGLFCPCYIFGKNAELLGSGTFAGPCLTHCISWALVNTICCFATNGALLGLPGCFVSCYA 98

Query: 145 CGYRKALRS 154
           CGYRK+LR+
Sbjct: 99  CGYRKSLRA 107

The following BLAST results are available for this feature:
BLAST of HG10019893 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8651159.18.2e-7490.34hypothetical protein Csa_002610 [Cucumis sativus][more]
XP_038903486.12.7e-6997.66protein PLANT CADMIUM RESISTANCE 10 [Benincasa hispida][more]
XP_004136605.12.0e-6490.63protein PLANT CADMIUM RESISTANCE 10 [Cucumis sativus][more]
KAG7017604.14.5e-6486.03Protein PLANT CADMIUM RESISTANCE 10, partial [Cucurbita argyrosperma subsp. argy... [more]
XP_008443175.17.7e-6489.06PREDICTED: protein PLANT CADMIUM RESISTANCE 10 [Cucumis melo][more]
BLAST of HG10019893 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8S8T81.6e-4059.68Protein PLANT CADMIUM RESISTANCE 10 OS=Arabidopsis thaliana OX=3702 GN=PCR10 PE=... [more]
B4FF802.2e-3755.04Cell number regulator 5 OS=Zea mays OX=4577 GN=CNR5 PE=2 SV=1[more]
BLAST of HG10019893 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LH649.8e-6590.63Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G815450 PE=4 SV=1[more]
A0A1S3B7G53.7e-6489.06protein PLANT CADMIUM RESISTANCE 10 OS=Cucumis melo OX=3656 GN=LOC103486838 PE=4... [more]
A0A6J1I6891.7e-6189.92protein PLANT CADMIUM RESISTANCE 10-like OS=Cucurbita maxima OX=3661 GN=LOC11147... [more]
A0A6J1GI453.9e-6189.92protein PLANT CADMIUM RESISTANCE 10-like OS=Cucurbita moschata OX=3662 GN=LOC111... [more]
A0A6J1F1V08.6e-6186.72protein PLANT CADMIUM RESISTANCE 10-like OS=Cucurbita moschata OX=3662 GN=LOC111... [more]
BLAST of HG10019893 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G40935.11.2e-4159.68PLAC8 family protein [more]
AT2G40935.31.3e-3251.61PLAC8 family protein [more]
AT2G40935.22.6e-2566.67PLAC8 family protein [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006461PLAC8 motif-containing proteinTIGRFAMTIGR01571TIGR01571coord: 67..153
e-value: 6.9E-19
score: 66.5
IPR006461PLAC8 motif-containing proteinPFAMPF04749PLAC8coord: 69..153
e-value: 9.0E-11
score: 42.5
IPR006461PLAC8 motif-containing proteinPANTHERPTHR15907DUF614 FAMILY PROTEIN-RELATEDcoord: 28..153
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 174..218
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 162..218
NoneNo IPR availablePANTHERPTHR15907:SF177PROTEIN PLANT CADMIUM RESISTANCE 10coord: 28..153

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10019893.1HG10019893.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane