HG10019876 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10019876
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	40S ribosomal protein s2
Location	Chr04: 26442829 .. 26444567 (-)
RNA-Seq Expression	HG10019876
Synteny	HG10019876

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGAGCGCGGCGGATTTGGACGAGGTTTTGGCGGCAGAGGACGTGGCGCAGGTGACCGTGGACGCGGAGGTCGCCGCCGCGCCGGTCGACGTGATGAAGAAGAGAAATGGGTTCCAGTCACCAAGCTAGGGCGCCTCGTGAAAGAGGGAAAGATCCAGTCCTTGGAGCAGATCTATCTCCATTCTCTCCCCATTAAGGAGCATCAGATCGTTGATACCCTCGTTGGTCCTAGCCTCAAGGACGAGGTTATGAAGATTATGCCAGTCCAGAAGCAGACCCGTGCCGGACAGAGGACCCGTTTCAAGGCGTTCGTCGTCGTCGGCGATGGTAATGGCCATGTGGGTTTGGGAGTTAAGTGTAGTAAAGAAGTTGCTACAGCGATTCGTGGTTCGATTATTTTGGCTAAGTTGTCTGTGATCCCTGTGAGAAGAGGGTATTGGGGTAACAAGATTGGTAAGCCCCATACAGTGCCGTGTAAAGTTACTGGAAAATGTGGATCCGTTACCGTCCGCATGGTTCCGGCGCCACGAGGTGCTGGGATTGTGGCGGCTAGAGTGCCCAAGAAGGTCTTGCAGTTCGCTGGGATCGAGGACGTGTTTACGTCTTCTAGAGGATCGACTAAAACTCTCGGAAACTTTGTTAAGGTTTGGCCTAAATCTATGGTTACTCTGTTCTCATTGTTCAGATTTTGGCTTTGTTCTACTAACAATATGTTGATTTCGACATGGTGTGCTTTATCATTATGAATAGTAACAATAAGTTCTTCAACCTTAAAATTTTCCAACATTGCTTTAATGTTTTATGGACTTGGCATTTTTATGTTCTGTTGCATTCATTGTTACATTGTGTTAGAACTCACATTTTTTTTTATCCTGCATGAAGATGAACTCTGAAATTCACTCTTTGATATATATATATATATATATATATATATATATTTTGTAGTGTCATGATTTCAAATTTAACAAGGACTAATGAATTTTTGAAAGTTTAGAGATCAAATCTTGTACCAAAAAAAAAAAAAAAGTCTAGAGATCAAAACAAAATTTAGAAGGAAAAATAGAGTTAGGGCCTATATTATTTTTGGTTAATTACAAATTTGGTCCTAATGGTTTGGAGAAAGTGAGAATTTATGCCTTTTGGTTTGATGAAACCCGATAGAGACTAAATTCTTACTTTTTCTTCAAACCACAAGGACCAAATTTGCAATTTAACCTTAATTATAAGAACTTTAGGGACTATATTATCCATGGTCATTTGATGATGAATTTCATTTTAGATGGGTTGTTTGATTTCAATTCTAGGAGGGGTTGTTTGAAACTTTTTATACAGTAATGTTGTCTGGCTGTATGTTGTTGCTCTTCAATTATCTACTAATCACACAGTGTTGTATCGTTGTTGGTTGCTCATAACAGTGGAATTCTGTTCAACTTAAGAAACTTCTCCTTGGTTTTGTGTGTCAATTCAGATTGATTTGTAGCTATTTTCTTATTATTAATAGGAACTTTGTCATTTATCAGGTCGTATTTGATTTCATGTGGGTCTTATTTCTTCATCTTTACTTCCATTTCAGGCAACATTTGACTGTCTGCTGAAAACTTACGGCTTCTTAACACCTGAATTTTGGAGGGAAACACGCTTTACAAAATCCCCATTCCAAGAACACACAGATTTGTTGGCGAAACCCACCGTCAAGGCATTGTTGTTGGAAGATCCTGACAGGGTGACTGCTTGA

mRNA sequence

ATGGCGGAGCGCGGCGGATTTGGACGAGGTTTTGGCGGCAGAGGACGTGGCGCAGGTGACCGTGGACGCGGAGGTCGCCGCCGCGCCGGTCGACGTGATGAAGAAGAGAAATGGGTTCCAGTCACCAAGCTAGGGCGCCTCGTGAAAGAGGGAAAGATCCAGTCCTTGGAGCAGATCTATCTCCATTCTCTCCCCATTAAGGAGCATCAGATCGTTGATACCCTCGTTGGTCCTAGCCTCAAGGACGAGGTTATGAAGATTATGCCAGTCCAGAAGCAGACCCGTGCCGGACAGAGGACCCGTTTCAAGGCGTTCGTCGTCGTCGGCGATGGTAATGGCCATGTGGGTTTGGGAGTTAAGTGTAGTAAAGAAGTTGCTACAGCGATTCGTGGTTCGATTATTTTGGCTAAGTTGTCTGTGATCCCTGTGAGAAGAGGGTATTGGGGTAACAAGATTGGTAAGCCCCATACAGTGCCGTGTAAAGTTACTGGAAAATGTGGATCCGTTACCGTCCGCATGGTTCCGGCGCCACGAGGTGCTGGGATTGTGGCGGCTAGAGTGCCCAAGAAGGTCTTGCAGTTCGCTGGGATCGAGGACGTGTTTACGTCTTCTAGAGGATCGACTAAAACTCTCGGAAACTTTGTTAAGGCAACATTTGACTGTCTGCTGAAAACTTACGGCTTCTTAACACCTGAATTTTGGAGGGAAACACGCTTTACAAAATCCCCATTCCAAGAACACACAGATTTGTTGGCGAAACCCACCGTCAAGGCATTGTTGTTGGAAGATCCTGACAGGGTGACTGCTTGA

Coding sequence (CDS)

ATGGCGGAGCGCGGCGGATTTGGACGAGGTTTTGGCGGCAGAGGACGTGGCGCAGGTGACCGTGGACGCGGAGGTCGCCGCCGCGCCGGTCGACGTGATGAAGAAGAGAAATGGGTTCCAGTCACCAAGCTAGGGCGCCTCGTGAAAGAGGGAAAGATCCAGTCCTTGGAGCAGATCTATCTCCATTCTCTCCCCATTAAGGAGCATCAGATCGTTGATACCCTCGTTGGTCCTAGCCTCAAGGACGAGGTTATGAAGATTATGCCAGTCCAGAAGCAGACCCGTGCCGGACAGAGGACCCGTTTCAAGGCGTTCGTCGTCGTCGGCGATGGTAATGGCCATGTGGGTTTGGGAGTTAAGTGTAGTAAAGAAGTTGCTACAGCGATTCGTGGTTCGATTATTTTGGCTAAGTTGTCTGTGATCCCTGTGAGAAGAGGGTATTGGGGTAACAAGATTGGTAAGCCCCATACAGTGCCGTGTAAAGTTACTGGAAAATGTGGATCCGTTACCGTCCGCATGGTTCCGGCGCCACGAGGTGCTGGGATTGTGGCGGCTAGAGTGCCCAAGAAGGTCTTGCAGTTCGCTGGGATCGAGGACGTGTTTACGTCTTCTAGAGGATCGACTAAAACTCTCGGAAACTTTGTTAAGGCAACATTTGACTGTCTGCTGAAAACTTACGGCTTCTTAACACCTGAATTTTGGAGGGAAACACGCTTTACAAAATCCCCATTCCAAGAACACACAGATTTGTTGGCGAAACCCACCGTCAAGGCATTGTTGTTGGAAGATCCTGACAGGGTGACTGCTTGA

Protein sequence

MAERGGFGRGFGGRGRGAGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIVDTLVGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKALLLEDPDRVTA

Homology

[Close]

BLAST of HG10019876 vs. NCBI nr
Match: XP_038906344.1 (40S ribosomal protein S2-4-like [Benincasa hispida])

HSP 1 Score: 525.8 bits (1353), Expect = 2.2e-145
Identity = 267/269 (99.26%), Postives = 268/269 (99.63%), Query Frame = 0


Query: 1   MAERGGFGRGFGGRGRGAGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIY 60
           MAERGGFGRGFGGRGRG GDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIY
Sbjct: 1   MAERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIY 60

Query: 61  LHSLPIKEHQIVDTLVGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVK 120
           LHSLPIKEHQIVDTL+GPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVK
Sbjct: 61  LHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVK 120

Query: 121 CSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGA 180
           CSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGA
Sbjct: 121 CSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGA 180

Query: 181 GIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFT 240
           GIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFT
Sbjct: 181 GIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFT 240

Query: 241 KSPFQEHTDLLAKPTVKALLLEDPDRVTA 270
           KSPFQEHTDLLAKPTVKALLLEDPDRVTA
Sbjct: 241 KSPFQEHTDLLAKPTVKALLLEDPDRVTA 269

[Close]

BLAST of HG10019876 vs. NCBI nr
Match: XP_008443195.1 (PREDICTED: 40S ribosomal protein S2-3-like [Cucumis melo] >ADN33986.1 40S ribosomal protein s2 [Cucumis melo subsp. melo] >KAA0053922.1 40S ribosomal protein S2-3-like [Cucumis melo var. makuwa] >TYK25482.1 40S ribosomal protein S2-3-like [Cucumis melo var. makuwa])

HSP 1 Score: 524.6 bits (1350), Expect = 4.9e-145
Identity = 266/269 (98.88%), Postives = 268/269 (99.63%), Query Frame = 0


Query: 1   MAERGGFGRGFGGRGRGAGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIY 60
           MAERGGFGRGFGGRGRG GDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEG+IQSLEQIY
Sbjct: 1   MAERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGRIQSLEQIY 60

Query: 61  LHSLPIKEHQIVDTLVGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVK 120
           LHSLPIKEHQIVDTL+GPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVK
Sbjct: 61  LHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVK 120

Query: 121 CSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGA 180
           CSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGA
Sbjct: 121 CSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGA 180

Query: 181 GIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFT 240
           GIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFT
Sbjct: 181 GIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFT 240

Query: 241 KSPFQEHTDLLAKPTVKALLLEDPDRVTA 270
           KSPFQEHTDLLAKPTVKALLLEDPDRVTA
Sbjct: 241 KSPFQEHTDLLAKPTVKALLLEDPDRVTA 269

[Close]

BLAST of HG10019876 vs. NCBI nr
Match: KGN59555.2 (hypothetical protein Csa_001030 [Cucumis sativus])

HSP 1 Score: 524.6 bits (1350), Expect = 4.9e-145
Identity = 266/269 (98.88%), Postives = 268/269 (99.63%), Query Frame = 0


Query: 1   MAERGGFGRGFGGRGRGAGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIY 60
           MAERGGFGRGFGGRGRG GDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIY
Sbjct: 83  MAERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIY 142

Query: 61  LHSLPIKEHQIVDTLVGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVK 120
           LHSLPIKEHQIVDTL+GPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVK
Sbjct: 143 LHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVK 202

Query: 121 CSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGA 180
           CSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGA
Sbjct: 203 CSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGA 262

Query: 181 GIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFT 240
           GIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLL+TYGFLTPEFWRETRFT
Sbjct: 263 GIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLRTYGFLTPEFWRETRFT 322

Query: 241 KSPFQEHTDLLAKPTVKALLLEDPDRVTA 270
           KSPFQEHTDLLAKPTVKALLLEDPDRVTA
Sbjct: 323 KSPFQEHTDLLAKPTVKALLLEDPDRVTA 351

[Close]

BLAST of HG10019876 vs. NCBI nr
Match: XP_011652156.1 (40S ribosomal protein S2-4 [Cucumis sativus])

HSP 1 Score: 524.6 bits (1350), Expect = 4.9e-145
Identity = 266/269 (98.88%), Postives = 268/269 (99.63%), Query Frame = 0


Query: 1   MAERGGFGRGFGGRGRGAGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIY 60
           MAERGGFGRGFGGRGRG GDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIY
Sbjct: 1   MAERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIY 60

Query: 61  LHSLPIKEHQIVDTLVGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVK 120
           LHSLPIKEHQIVDTL+GPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVK
Sbjct: 61  LHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVK 120

Query: 121 CSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGA 180
           CSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGA
Sbjct: 121 CSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGA 180

Query: 181 GIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFT 240
           GIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLL+TYGFLTPEFWRETRFT
Sbjct: 181 GIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLRTYGFLTPEFWRETRFT 240

Query: 241 KSPFQEHTDLLAKPTVKALLLEDPDRVTA 270
           KSPFQEHTDLLAKPTVKALLLEDPDRVTA
Sbjct: 241 KSPFQEHTDLLAKPTVKALLLEDPDRVTA 269

[Close]

BLAST of HG10019876 vs. NCBI nr
Match: KAG7017612.1 (40S ribosomal protein S2-3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 522.7 bits (1345), Expect = 1.9e-144
Identity = 264/269 (98.14%), Postives = 268/269 (99.63%), Query Frame = 0


Query: 1   MAERGGFGRGFGGRGRGAGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIY 60
           MAERGGFGRGFGGRGRG GDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIY
Sbjct: 44  MAERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIY 103

Query: 61  LHSLPIKEHQIVDTLVGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVK 120
           LHSLPIKEHQI+DTL+GPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVK
Sbjct: 104 LHSLPIKEHQIIDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVK 163

Query: 121 CSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGA 180
           CSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGA
Sbjct: 164 CSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGA 223

Query: 181 GIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFT 240
           GIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFT
Sbjct: 224 GIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFT 283

Query: 241 KSPFQEHTDLLAKPTVKALLLEDPDRVTA 270
           KSPFQEHTDLLAKPTVKALLLEDPD+V+A
Sbjct: 284 KSPFQEHTDLLAKPTVKALLLEDPDKVSA 312

[Close]

BLAST of HG10019876 vs. ExPASy Swiss-Prot
Match: Q9SCM3 (40S ribosomal protein S2-4 OS=Arabidopsis thaliana OX=3702 GN=RPS2D PE=2 SV=1)

HSP 1 Score: 438.3 bits (1126), Expect = 6.1e-122
Identity = 225/257 (87.55%), Postives = 239/257 (93.00%), Query Frame = 0


Query: 3   ERGGFGRGFGGRGRG-AGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYL 62
           +RG FGRGFGGRG G  G RGRG  RRAGR  EEEKWVPVTKLGRLVKEGKI  +EQIYL
Sbjct: 11  DRGDFGRGFGGRGGGRGGPRGRG--RRAGRAPEEEKWVPVTKLGRLVKEGKITKIEQIYL 70

Query: 63  HSLPIKEHQIVDTLVGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVKC 122
           HSLP+KE+QI+D LVGPSLKDEVMKIMPVQKQTRAGQRTRFKAF+VVGD NGHVGLGVKC
Sbjct: 71  HSLPVKEYQIIDLLVGPSLKDEVMKIMPVQKQTRAGQRTRFKAFIVVGDSNGHVGLGVKC 130

Query: 123 SKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAG 182
           SKEVATAIRG+IILAKLSV+P+RRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRG+G
Sbjct: 131 SKEVATAIRGAIILAKLSVVPIRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGSG 190

Query: 183 IVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTK 242
           IVAARVPKKVLQFAGI+DVFTSSRGSTKTLGNFVKATFDCL KTYGFLTPEFW+ETRF+K
Sbjct: 191 IVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLQKTYGFLTPEFWKETRFSK 250

Query: 243 SPFQEHTD-LLAKPTVK 258
           SP+QEHTD LL  P VK
Sbjct: 251 SPYQEHTDFLLIPPGVK 265

[Close]

BLAST of HG10019876 vs. ExPASy Swiss-Prot
Match: P49688 (40S ribosomal protein S2-3 OS=Arabidopsis thaliana OX=3702 GN=RPS2C PE=1 SV=2)

HSP 1 Score: 437.2 bits (1123), Expect = 1.4e-121
Identity = 228/269 (84.76%), Postives = 243/269 (90.33%), Query Frame = 0


Query: 3   ERGGFGRGFGGR-GRG-AGDRGRGGR--RRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQ 62
           ERG FGRGFGGR GRG  G RGRGGR  RR GR  EEEKWVPVTKLGRLV  G I+ +EQ
Sbjct: 15  ERGDFGRGFGGRGGRGDRGGRGRGGRGGRRGGRASEEEKWVPVTKLGRLVAAGHIKQIEQ 74

Query: 63  IYLHSLPIKEHQIVDTLVGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLG 122
           IYLHSLP+KE+QI+D L+GP+LKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLG
Sbjct: 75  IYLHSLPVKEYQIIDMLIGPTLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLG 134

Query: 123 VKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR 182
           VKCSKEVATAIRG+IILAKLSV+PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR
Sbjct: 135 VKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR 194

Query: 183 GAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETR 242
           G+GIVAARVPKKVLQFAGI+DVFTSSRGSTKTLGNFVKATFDCL KTYGFLTPEFW+ETR
Sbjct: 195 GSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLQKTYGFLTPEFWKETR 254

Query: 243 FTKSPFQEHTDLLAKPTVKALLLEDPDRV 268
           F++SP+QEHTD LA    KAL    PD V
Sbjct: 255 FSRSPYQEHTDFLAS---KALSTSKPDPV 280

[Close]

BLAST of HG10019876 vs. ExPASy Swiss-Prot
Match: Q8L8Y0 (40S ribosomal protein S2-1 OS=Arabidopsis thaliana OX=3702 GN=RPS2A PE=2 SV=2)

HSP 1 Score: 429.5 bits (1103), Expect = 2.8e-119
Identity = 220/261 (84.29%), Postives = 235/261 (90.04%), Query Frame = 0


Query: 3   ERGGFGRGF-----GGRGRGAGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLE 62
           +RG FGRGF     GGRGR  G RGRG  RR GR  EE KWVPVTKLGRLV + KI  LE
Sbjct: 15  DRGDFGRGFGGGRGGGRGRDRGPRGRG--RRGGRASEETKWVPVTKLGRLVADNKITKLE 74

Query: 63  QIYLHSLPIKEHQIVDTLVGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGL 122
           QIYLHSLP+KE+QI+D LVGP+LKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGL
Sbjct: 75  QIYLHSLPVKEYQIIDHLVGPTLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGL 134

Query: 123 GVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAP 182
           GVKCSKEVATAIRG+IILAKLSV+PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAP
Sbjct: 135 GVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAP 194

Query: 183 RGAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRET 242
           RG+GIVAARVPKKVLQFAGI+DVFTSSRGSTKTLGNFVKATFDCL KTYGFLTPEFW+ET
Sbjct: 195 RGSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLQKTYGFLTPEFWKET 254

Query: 243 RFTKSPFQEHTDLLAKPTVKA 259
           RF++SP+QEHTD L+   V A
Sbjct: 255 RFSRSPYQEHTDFLSTKAVSA 273

[Close]

BLAST of HG10019876 vs. ExPASy Swiss-Prot
Match: Q93VB8 (40S ribosomal protein S2-2 OS=Arabidopsis thaliana OX=3702 GN=RPS2B PE=2 SV=1)

HSP 1 Score: 429.5 bits (1103), Expect = 2.8e-119
Identity = 220/261 (84.29%), Postives = 235/261 (90.04%), Query Frame = 0


Query: 3   ERGGFGRGF-----GGRGRGAGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLE 62
           +RG FGRGF     GGRGR  G RGRG  RR GR  EE KWVPVTKLGRLV + KI  LE
Sbjct: 15  DRGDFGRGFGGGRGGGRGRDRGPRGRG--RRGGRASEETKWVPVTKLGRLVADNKITKLE 74

Query: 63  QIYLHSLPIKEHQIVDTLVGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGL 122
           QIYLHSLP+KE+QI+D LVGP+LKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGL
Sbjct: 75  QIYLHSLPVKEYQIIDHLVGPTLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGL 134

Query: 123 GVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAP 182
           GVKCSKEVATAIRG+IILAKLSV+PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAP
Sbjct: 135 GVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAP 194

Query: 183 RGAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRET 242
           RG+GIVAARVPKKVLQFAGI+DVFTSSRGSTKTLGNFVKATFDCL KTYGFLTPEFW+ET
Sbjct: 195 RGSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLQKTYGFLTPEFWKET 254

Query: 243 RFTKSPFQEHTDLLAKPTVKA 259
           RF++SP+QEHTD L+   V A
Sbjct: 255 RFSRSPYQEHTDFLSTKAVSA 273

[Close]

BLAST of HG10019876 vs. ExPASy Swiss-Prot
Match: P49154 (40S ribosomal protein S2 OS=Urechis caupo OX=6431 GN=RPS2 PE=2 SV=1)

HSP 1 Score: 366.7 bits (940), Expect = 2.3e-100
Identity = 186/251 (74.10%), Postives = 215/251 (85.66%), Query Frame = 0


Query: 4   RGGFGRGFGGRGRGAG-DRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLH 63
           RGGF  GFGGRGRG G  RGRG  R  G +D +++WVPVTKLGRLVK+ KI++LE+IYL 
Sbjct: 11  RGGFRGGFGGRGRGRGRGRGRGRGRGRGAKDGDKEWVPVTKLGRLVKDMKIKTLEEIYLF 70

Query: 64  SLPIKEHQIVDTLVGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVKCS 123
           SLPIKE +I+D  +G +LKDEV+KIMPVQKQTRAGQRTRFKAFV +GD NGHVGLGVKCS
Sbjct: 71  SLPIKEFEIIDFFLGDALKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDYNGHVGLGVKCS 130

Query: 124 KEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGI 183
           KEVATAIRG+IILAKLSV+PVRRGYWGNKIGKPHTVPCKVTGKCGSV VR++PAPRG GI
Sbjct: 131 KEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVLVRLIPAPRGTGI 190

Query: 184 VAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKS 243
           V+A VPKK+L  AGI+D +TS+RG T TLGNF KAT+  +  TY +LTP+ WRET FTKS
Sbjct: 191 VSAPVPKKLLAMAGIDDCYTSARGQTATLGNFAKATYAAIAATYSYLTPDLWRETVFTKS 250

Query: 244 PFQEHTDLLAK 254
           P+QE+TD LAK
Sbjct: 251 PYQEYTDYLAK 261

[Close]

BLAST of HG10019876 vs. ExPASy TrEMBL
Match: A0A5D3DPL0 (40S ribosomal protein S2-3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G006280 PE=3 SV=1)

HSP 1 Score: 524.6 bits (1350), Expect = 2.4e-145
Identity = 266/269 (98.88%), Postives = 268/269 (99.63%), Query Frame = 0


Query: 1   MAERGGFGRGFGGRGRGAGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIY 60
           MAERGGFGRGFGGRGRG GDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEG+IQSLEQIY
Sbjct: 1   MAERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGRIQSLEQIY 60

Query: 61  LHSLPIKEHQIVDTLVGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVK 120
           LHSLPIKEHQIVDTL+GPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVK
Sbjct: 61  LHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVK 120

Query: 121 CSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGA 180
           CSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGA
Sbjct: 121 CSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGA 180

Query: 181 GIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFT 240
           GIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFT
Sbjct: 181 GIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFT 240

Query: 241 KSPFQEHTDLLAKPTVKALLLEDPDRVTA 270
           KSPFQEHTDLLAKPTVKALLLEDPDRVTA
Sbjct: 241 KSPFQEHTDLLAKPTVKALLLEDPDRVTA 269

[Close]

BLAST of HG10019876 vs. ExPASy TrEMBL
Match: E5GBY7 (40S ribosomal protein s2 OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1)

HSP 1 Score: 524.6 bits (1350), Expect = 2.4e-145
Identity = 266/269 (98.88%), Postives = 268/269 (99.63%), Query Frame = 0


Query: 1   MAERGGFGRGFGGRGRGAGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIY 60
           MAERGGFGRGFGGRGRG GDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEG+IQSLEQIY
Sbjct: 1   MAERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGRIQSLEQIY 60

Query: 61  LHSLPIKEHQIVDTLVGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVK 120
           LHSLPIKEHQIVDTL+GPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVK
Sbjct: 61  LHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVK 120

Query: 121 CSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGA 180
           CSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGA
Sbjct: 121 CSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGA 180

Query: 181 GIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFT 240
           GIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFT
Sbjct: 181 GIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFT 240

Query: 241 KSPFQEHTDLLAKPTVKALLLEDPDRVTA 270
           KSPFQEHTDLLAKPTVKALLLEDPDRVTA
Sbjct: 241 KSPFQEHTDLLAKPTVKALLLEDPDRVTA 269

[Close]

BLAST of HG10019876 vs. ExPASy TrEMBL
Match: A0A0A0LFC7 (S5 DRBM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G816100 PE=3 SV=1)

HSP 1 Score: 524.6 bits (1350), Expect = 2.4e-145
Identity = 266/269 (98.88%), Postives = 268/269 (99.63%), Query Frame = 0


Query: 1   MAERGGFGRGFGGRGRGAGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIY 60
           MAERGGFGRGFGGRGRG GDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIY
Sbjct: 1   MAERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIY 60

Query: 61  LHSLPIKEHQIVDTLVGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVK 120
           LHSLPIKEHQIVDTL+GPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVK
Sbjct: 61  LHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVK 120

Query: 121 CSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGA 180
           CSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGA
Sbjct: 121 CSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGA 180

Query: 181 GIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFT 240
           GIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLL+TYGFLTPEFWRETRFT
Sbjct: 181 GIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLRTYGFLTPEFWRETRFT 240

Query: 241 KSPFQEHTDLLAKPTVKALLLEDPDRVTA 270
           KSPFQEHTDLLAKPTVKALLLEDPDRVTA
Sbjct: 241 KSPFQEHTDLLAKPTVKALLLEDPDRVTA 269

[Close]

BLAST of HG10019876 vs. ExPASy TrEMBL
Match: A0A1S3B7F9 (40S ribosomal protein S2-3-like OS=Cucumis melo OX=3656 GN=LOC103486852 PE=3 SV=1)

HSP 1 Score: 524.6 bits (1350), Expect = 2.4e-145
Identity = 266/269 (98.88%), Postives = 268/269 (99.63%), Query Frame = 0


Query: 1   MAERGGFGRGFGGRGRGAGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIY 60
           MAERGGFGRGFGGRGRG GDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEG+IQSLEQIY
Sbjct: 1   MAERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGRIQSLEQIY 60

Query: 61  LHSLPIKEHQIVDTLVGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVK 120
           LHSLPIKEHQIVDTL+GPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVK
Sbjct: 61  LHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVK 120

Query: 121 CSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGA 180
           CSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGA
Sbjct: 121 CSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGA 180

Query: 181 GIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFT 240
           GIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFT
Sbjct: 181 GIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFT 240

Query: 241 KSPFQEHTDLLAKPTVKALLLEDPDRVTA 270
           KSPFQEHTDLLAKPTVKALLLEDPDRVTA
Sbjct: 241 KSPFQEHTDLLAKPTVKALLLEDPDRVTA 269

[Close]

BLAST of HG10019876 vs. ExPASy TrEMBL
Match: A0A6J1F4N7 (40S ribosomal protein S2-4-like OS=Cucurbita moschata OX=3662 GN=LOC111442079 PE=3 SV=1)

HSP 1 Score: 521.2 bits (1341), Expect = 2.6e-144
Identity = 263/269 (97.77%), Postives = 268/269 (99.63%), Query Frame = 0


Query: 1   MAERGGFGRGFGGRGRGAGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIY 60
           MAERGGFGRGFGGRGRG GDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIY
Sbjct: 1   MAERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIY 60

Query: 61  LHSLPIKEHQIVDTLVGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVK 120
           LHSLPIKEHQI+DTL+GPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVK
Sbjct: 61  LHSLPIKEHQIIDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVK 120

Query: 121 CSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGA 180
           CSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTV+MVPAPRGA
Sbjct: 121 CSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVQMVPAPRGA 180

Query: 181 GIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFT 240
           GIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFT
Sbjct: 181 GIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFT 240

Query: 241 KSPFQEHTDLLAKPTVKALLLEDPDRVTA 270
           KSPFQEHTDLLAKPTVKALLLEDPD+V+A
Sbjct: 241 KSPFQEHTDLLAKPTVKALLLEDPDKVSA 269

[Close]

BLAST of HG10019876 vs. TAIR 10
Match: AT3G57490.1 (Ribosomal protein S5 family protein )

HSP 1 Score: 438.3 bits (1126), Expect = 4.3e-123
Identity = 225/257 (87.55%), Postives = 239/257 (93.00%), Query Frame = 0


Query: 3   ERGGFGRGFGGRGRG-AGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYL 62
           +RG FGRGFGGRG G  G RGRG  RRAGR  EEEKWVPVTKLGRLVKEGKI  +EQIYL
Sbjct: 11  DRGDFGRGFGGRGGGRGGPRGRG--RRAGRAPEEEKWVPVTKLGRLVKEGKITKIEQIYL 70

Query: 63  HSLPIKEHQIVDTLVGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVKC 122
           HSLP+KE+QI+D LVGPSLKDEVMKIMPVQKQTRAGQRTRFKAF+VVGD NGHVGLGVKC
Sbjct: 71  HSLPVKEYQIIDLLVGPSLKDEVMKIMPVQKQTRAGQRTRFKAFIVVGDSNGHVGLGVKC 130

Query: 123 SKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAG 182
           SKEVATAIRG+IILAKLSV+P+RRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRG+G
Sbjct: 131 SKEVATAIRGAIILAKLSVVPIRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGSG 190

Query: 183 IVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTK 242
           IVAARVPKKVLQFAGI+DVFTSSRGSTKTLGNFVKATFDCL KTYGFLTPEFW+ETRF+K
Sbjct: 191 IVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLQKTYGFLTPEFWKETRFSK 250

Query: 243 SPFQEHTD-LLAKPTVK 258
           SP+QEHTD LL  P VK
Sbjct: 251 SPYQEHTDFLLIPPGVK 265

[Close]

BLAST of HG10019876 vs. TAIR 10
Match: AT2G41840.1 (Ribosomal protein S5 family protein )

HSP 1 Score: 437.2 bits (1123), Expect = 9.6e-123
Identity = 228/269 (84.76%), Postives = 243/269 (90.33%), Query Frame = 0


Query: 3   ERGGFGRGFGGR-GRG-AGDRGRGGR--RRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQ 62
           ERG FGRGFGGR GRG  G RGRGGR  RR GR  EEEKWVPVTKLGRLV  G I+ +EQ
Sbjct: 15  ERGDFGRGFGGRGGRGDRGGRGRGGRGGRRGGRASEEEKWVPVTKLGRLVAAGHIKQIEQ 74

Query: 63  IYLHSLPIKEHQIVDTLVGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLG 122
           IYLHSLP+KE+QI+D L+GP+LKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLG
Sbjct: 75  IYLHSLPVKEYQIIDMLIGPTLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLG 134

Query: 123 VKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR 182
           VKCSKEVATAIRG+IILAKLSV+PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR
Sbjct: 135 VKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR 194

Query: 183 GAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETR 242
           G+GIVAARVPKKVLQFAGI+DVFTSSRGSTKTLGNFVKATFDCL KTYGFLTPEFW+ETR
Sbjct: 195 GSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLQKTYGFLTPEFWKETR 254

Query: 243 FTKSPFQEHTDLLAKPTVKALLLEDPDRV 268
           F++SP+QEHTD LA    KAL    PD V
Sbjct: 255 FSRSPYQEHTDFLAS---KALSTSKPDPV 280

[Close]

BLAST of HG10019876 vs. TAIR 10
Match: AT1G58983.1 (Ribosomal protein S5 family protein )

HSP 1 Score: 429.5 bits (1103), Expect = 2.0e-120
Identity = 220/261 (84.29%), Postives = 235/261 (90.04%), Query Frame = 0


Query: 3   ERGGFGRGF-----GGRGRGAGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLE 62
           +RG FGRGF     GGRGR  G RGRG  RR GR  EE KWVPVTKLGRLV + KI  LE
Sbjct: 15  DRGDFGRGFGGGRGGGRGRDRGPRGRG--RRGGRASEETKWVPVTKLGRLVADNKITKLE 74

Query: 63  QIYLHSLPIKEHQIVDTLVGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGL 122
           QIYLHSLP+KE+QI+D LVGP+LKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGL
Sbjct: 75  QIYLHSLPVKEYQIIDHLVGPTLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGL 134

Query: 123 GVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAP 182
           GVKCSKEVATAIRG+IILAKLSV+PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAP
Sbjct: 135 GVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAP 194

Query: 183 RGAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRET 242
           RG+GIVAARVPKKVLQFAGI+DVFTSSRGSTKTLGNFVKATFDCL KTYGFLTPEFW+ET
Sbjct: 195 RGSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLQKTYGFLTPEFWKET 254

Query: 243 RFTKSPFQEHTDLLAKPTVKA 259
           RF++SP+QEHTD L+   V A
Sbjct: 255 RFSRSPYQEHTDFLSTKAVSA 273

[Close]

BLAST of HG10019876 vs. TAIR 10
Match: AT1G59359.1 (Ribosomal protein S5 family protein )

HSP 1 Score: 429.5 bits (1103), Expect = 2.0e-120
Identity = 220/261 (84.29%), Postives = 235/261 (90.04%), Query Frame = 0


Query: 3   ERGGFGRGF-----GGRGRGAGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLE 62
           +RG FGRGF     GGRGR  G RGRG  RR GR  EE KWVPVTKLGRLV + KI  LE
Sbjct: 15  DRGDFGRGFGGGRGGGRGRDRGPRGRG--RRGGRASEETKWVPVTKLGRLVADNKITKLE 74

Query: 63  QIYLHSLPIKEHQIVDTLVGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGL 122
           QIYLHSLP+KE+QI+D LVGP+LKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGL
Sbjct: 75  QIYLHSLPVKEYQIIDHLVGPTLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGL 134

Query: 123 GVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAP 182
           GVKCSKEVATAIRG+IILAKLSV+PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAP
Sbjct: 135 GVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAP 194

Query: 183 RGAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRET 242
           RG+GIVAARVPKKVLQFAGI+DVFTSSRGSTKTLGNFVKATFDCL KTYGFLTPEFW+ET
Sbjct: 195 RGSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLQKTYGFLTPEFWKET 254

Query: 243 RFTKSPFQEHTDLLAKPTVKA 259
           RF++SP+QEHTD L+   V A
Sbjct: 255 RFSRSPYQEHTDFLSTKAVSA 273

[Close]

BLAST of HG10019876 vs. TAIR 10
Match: AT1G58380.1 (Ribosomal protein S5 family protein )

HSP 1 Score: 429.5 bits (1103), Expect = 2.0e-120
Identity = 220/261 (84.29%), Postives = 235/261 (90.04%), Query Frame = 0


Query: 3   ERGGFGRGF-----GGRGRGAGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLE 62
           +RG FGRGF     GGRGR  G RGRG  RR GR  EE KWVPVTKLGRLV + KI  LE
Sbjct: 15  DRGDFGRGFGGGRGGGRGRDRGPRGRG--RRGGRASEETKWVPVTKLGRLVADNKITKLE 74

Query: 63  QIYLHSLPIKEHQIVDTLVGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGL 122
           QIYLHSLP+KE+QI+D LVGP+LKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGL
Sbjct: 75  QIYLHSLPVKEYQIIDHLVGPTLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGL 134

Query: 123 GVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAP 182
           GVKCSKEVATAIRG+IILAKLSV+PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAP
Sbjct: 135 GVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAP 194

Query: 183 RGAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRET 242
           RG+GIVAARVPKKVLQFAGI+DVFTSSRGSTKTLGNFVKATFDCL KTYGFLTPEFW+ET
Sbjct: 195 RGSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLQKTYGFLTPEFWKET 254

Query: 243 RFTKSPFQEHTDLLAKPTVKA 259
           RF++SP+QEHTD L+   V A
Sbjct: 255 RFSRSPYQEHTDFLSTKAVSA 273

The following BLAST results are available for this feature:

BLAST of HG10019876 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038906344.1	2.2e-145	99.26	40S ribosomal protein S2-4-like [Benincasa hispida]	[more]
XP_008443195.1	4.9e-145	98.88	PREDICTED: 40S ribosomal protein S2-3-like [Cucumis melo] >ADN33986.1 40S riboso...	[more]
KGN59555.2	4.9e-145	98.88	hypothetical protein Csa_001030 [Cucumis sativus]	[more]
XP_011652156.1	4.9e-145	98.88	40S ribosomal protein S2-4 [Cucumis sativus]	[more]
KAG7017612.1	1.9e-144	98.14	40S ribosomal protein S2-3, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of HG10019876 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SCM3	6.1e-122	87.55	40S ribosomal protein S2-4 OS=Arabidopsis thaliana OX=3702 GN=RPS2D PE=2 SV=1	[more]
P49688	1.4e-121	84.76	40S ribosomal protein S2-3 OS=Arabidopsis thaliana OX=3702 GN=RPS2C PE=1 SV=2	[more]
Q8L8Y0	2.8e-119	84.29	40S ribosomal protein S2-1 OS=Arabidopsis thaliana OX=3702 GN=RPS2A PE=2 SV=2	[more]
Q93VB8	2.8e-119	84.29	40S ribosomal protein S2-2 OS=Arabidopsis thaliana OX=3702 GN=RPS2B PE=2 SV=1	[more]
P49154	2.3e-100	74.10	40S ribosomal protein S2 OS=Urechis caupo OX=6431 GN=RPS2 PE=2 SV=1	[more]

BLAST of HG10019876 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DPL0	2.4e-145	98.88	40S ribosomal protein S2-3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
E5GBY7	2.4e-145	98.88	40S ribosomal protein s2 OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1	[more]
A0A0A0LFC7	2.4e-145	98.88	S5 DRBM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G816100 PE=...	[more]
A0A1S3B7F9	2.4e-145	98.88	40S ribosomal protein S2-3-like OS=Cucumis melo OX=3656 GN=LOC103486852 PE=3 SV=...	[more]
A0A6J1F4N7	2.6e-144	97.77	40S ribosomal protein S2-4-like OS=Cucurbita moschata OX=3662 GN=LOC111442079 PE...	[more]

BLAST of HG10019876 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G57490.1	4.3e-123	87.55	Ribosomal protein S5 family protein	[more]
AT2G41840.1	9.6e-123	84.76	Ribosomal protein S5 family protein	[more]
AT1G58983.1	2.0e-120	84.29	Ribosomal protein S5 family protein	[more]
AT1G59359.1	2.0e-120	84.29	Ribosomal protein S5 family protein	[more]
AT1G58380.1	2.0e-120	84.29	Ribosomal protein S5 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014721	Ribosomal protein S5 domain 2-type fold, subgroup	GENE3D	3.30.230.10		coord: 143..236 e-value: 9.5E-51 score: 171.9
IPR005324	Ribosomal protein S5, C-terminal	PFAM	PF03719	Ribosomal_S5_C	coord: 163..229 e-value: 8.6E-24 score: 82.8
IPR005711	Ribosomal protein S5, eukaryotic/archaeal	TIGRFAM	TIGR01020	TIGR01020	coord: 33..240 e-value: 8.5E-94 score: 310.9
None	No IPR available	GENE3D	3.30.160.20		coord: 37..142 e-value: 8.5E-56 score: 188.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 19..35
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..35
None	No IPR available	PANTHER	PTHR13718:SF101	40S RIBOSOMAL PROTEIN S2-1-RELATED	coord: 2..266
None	No IPR available	SUPERFAMILY	54768	dsRNA-binding domain-like	coord: 76..145
IPR013810	Ribosomal protein S5, N-terminal	PFAM	PF00333	Ribosomal_S5	coord: 80..144 e-value: 6.9E-30 score: 102.8
IPR013810	Ribosomal protein S5, N-terminal	PROSITE	PS50881	S5_DSRBD	coord: 80..143 score: 22.755819
IPR000851	Ribosomal protein S5	PANTHER	PTHR13718	RIBOSOMAL S SUBUNIT	coord: 2..266
IPR018192	Ribosomal protein S5, N-terminal, conserved site	PROSITE	PS00585	RIBOSOMAL_S5	coord: 97..129
IPR020568	Ribosomal protein S5 domain 2-type fold	SUPERFAMILY	54211	Ribosomal protein S5 domain 2-like	coord: 156..236

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10019876.1	HG10019876.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0022627	cytosolic small ribosomal subunit
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005840	ribosome
cellular_component	GO:0015935	small ribosomal subunit
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0003723	RNA binding