HG10019829 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10019829
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionrRNA-processing protein FCF1 homolog
LocationChr04: 25858907 .. 25865045 (+)
RNA-Seq ExpressionHG10019829
SyntenyHG10019829
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCGGAATGCAATACAACTTCTTTCCTACAGATTTCTACTACCCTCGTCCACCGTCGCCGCTGCCTAATTCCGTTCAAATCTCCACCAAGCCACCACTGTCTACAGTTGCTCCTCTGCCGAGCAAAACAGTTGAAGACGATCGAGAAGCTGACCGGTCACTCGACAAACCGAAAGCATTGTCGTCGTTGTCGTCGTCTGTGACCATGGACAAGAAGGAGGTTGGAGCTTCTACTTCCATGGCGTTTCATCCTCCTCCCTCTTATATCCTCAAACAATGAAACCGTCACCATTATTTTTCCCTCTCTCCCTTAGATTTGAATAAAGTATTTTGTCATGTTGGAAAATTGCTCTTGGTTTGTATTTAATGAATTATATATAAACATATGCTTGTAAATGAAAGTGATACTTGACATAAATTTCTAATCACTCGTTTGATAACTATTTTGTTTTTATTTTTTATTTGGACTATAGTTTTATAAATTAATATACTTTTATAAAAATGTTGGACTCACTTTATCATATTTTTAAATATATTATTTGAGATTGGTACTAATTTAATAGTTCAATAAATCAAATTGTTAATGGTCAAATTCGAATGAAAAAAGAATAATTGAGCGGTAAGTAATAATATGGTCCTGAAGCTAGTGCATCTTTGGGTTCACTAATCTTTGGATCAATTTTTTTTTCTTTTTTGGATCAAATGCCCGTTTGGGCTTTTTGAATTTTGATACCATATTAGATTGACAGTGAGAGAGGTAATCTGTCTAAGATTGTGAAGTCCCTAATTTTTCAACCCAAAATTGTCAATAGCATACCATTATTCATGCATAGCTTTTGCTTTCTATTGTTCTTATTTAGGACAATGAAAAAGAATTAAATCATAAGATATTTTCATAACTTTGTCCTAACTTAAATGAATTTTATTTAAAGCCAAAAGACATAAGGTTCTCAACAAGAACAAATACAACTTTATCGAATGAAATAGAGAAAAAAAGTATTTATATAGATTAAATTGGTTATGAAGTGAAAATTTAAATTAATTTTAATAATGATAAAAGAATAGTGAAAATTAATTAATAGACATTAACATAAAGATTGTACATGAATATTTGGTAAAAAATCGAGGCTAAAAGCGTAAGTCTTGAATTTGAGAGACTAAAGTGTAACATTTTGAAATTTAAAGACCAAATAAAAATTAAGTCAAATTTTTTTTAGACAATATATGAGATAGGAGATTGAACCTCTAATTTCAAAGTTGATGGTAAGTTATGCTTTTTTTTTTTTTTTTTTTTTGGACAGGTAAACCAAAAACTTACGAATAAGAAATCACATATTAAATGTTTATATGATGAACCATGAAACAAACGAGCCCTCATTCCATTATTATTATTTTTTATTATTTTTTTTTAAGAACGAAAACTCAGCCCAATTTGTAAAATAAATAATAATAATAAATATAATTATAGAAAGAGGCAAAACCCTAACCTCCATCATCGTCCTCTCCCTCTCACGTGCTCCACGACACCTTCTTCTTCTTCTTCACTCTGTTTCCTCCTTCCTTTCAGCACTTAGTGCCGCCGCCGACTCTCTCCCGTTCCGTGCCGCCGCCGCCGCCGTTTTTCCTCTGCTTGTGCCGCCCCAGCCTCTCTCCTAACCGGTTTGCACTGATTGTCTAATATCTTGTTTTACTGGTATCGTCCCAATCTCCATCTATGTCTATCATCTCAGTTGAACAACATAAATTAGGGCTTGTCTAATGAAAGAATGGAGGAGTTATTTTCATTTTATTTTTAAATTTTTAAAAATATCCGAAAAGAACAGCAACGAGTAACCAAAAAAAAGCTTGCGGCAAATTGGTACTTCTCGCCTATTGATTTGTAACATTTACATACATCTGTCAATAAAGGCTTTAATCATCTGTTTATCTCTTTGGTTTATGCTGAAAATTGCCTTGTTTCTCCGACCACGAATTAGTTCTAGCATCTCCTTTCTTTATTTATCAGAGGATTAGGCTGAATAATCTATCCTATTATAAAATTCTCTTTTAATCCTTAGTTTGTAGTATTAATTTTTATTTACATTTATCTAACAAATTCAACCAATTTATTCTTGTATATTTGTAGATTATAGTTGGGGAGAAGACAATGAGTTGAAAATATTCATAGTAAAATAAAATACCTTAAATTTGGATGGCTTAAATGGCACCTAAAGACTCTTCCTTTTAGTTTTAGCCACTTCTAGACTTGTAATTTTCATGGGAATATTATGAAGGAACAAAAATGTTTTATGGAGAAATTAAGTGCTTTTTTTTTTTTTTTTTAATAATTATTATTATTATTTTTTAAACTAACAAGTAACACAGTAGACATCTCTATTTTCCCCCTCAGGGATCCTTAGAATTACCCCCTGCTTAGCTTTCAATTTGTCTTTTGACCATCAAATGAGGTGTGAATAACCCGTCCTCCTCTCTTTGAAATATGGGACCCTTTTGTACTGTCGGGTGCTCAAAACAATTTAGTCTTCTCTATATTTCTATCTCTAGAGTCAATAATTTTATATGTGAAGTGAACTCAATATATGTTAACATGTATGGTATGCATGAGTTTTGTGGAAATTGGTGCAAATATATTACTTTTTGATTGTCCTGTTGAGATTTTGGGATTCATATAAATGATTATAAGTTGTTTCCTCGTTACCAAACATTGCAGACAGTGAACAAATCCTCCTCTAAGCATCAAAACATTGAAATTGCATCTGAGAAGAGCGAGAGAGAATTTAGACAGCCATTTGGTGGCACAACTTCAATTATTCTTTTTCCTTCAATCAACGAGATGGGGAGGGCGAAGAAAGGACCCAAATTTGCAGTCATGAAGAAGATGGTCACCTCTAAAGCAATTAAGAGGTATGCCTTCCGTTTCTTTTAATTGATAACTTTATCCAACTCTTTTTTTAAAAAAATATTTTTTGCTTATGTTCATTTTGTTTTGCTATTTATCTTAGCTATAAGGAAGAGGTCTTGAATCCAAAAAGAAAAGATCTTACAAAAGAAAGTCTCCCAAGAAATGTGTAAGGAACTTCTTGAGCTGACTATTTTCTACTTTATCTTTCCATAACATTTTCTAAGTTTATTGTCGAACATAAAAATTTGTTTTCTACTGTTGGTGTTGTCTACGTCAAATTCATACTTATATTGCTGTTAATTCAGTCCAAATGTTCCTTCGGCACTTTTCTTCAAGTATAACACTGCATTGGGGCCACCTTATCGGGTTTTGGTGGATACAAACTTCATCAATTTCTCCATTCAAAACAAAGTGAGTGCTTCACATTTTTAATGAGACTATATTATATTATAACTGTGTGATTCCTATGGAAATGTAAATCCCATTTTATTATGAATATGTTTGTGAATGATTTGAAAAGCATATGTAATTTTTTTGAAAACTGGTGGAATTTTTCTCGTCAAATTTCATAATGATGAGAAAGCACTACATCATGCAACTTGCAAGTGAAAATAAGGATAAAATTTATTTTTACTTGATGATTGAAGTGGTTTTTTTTTTTTTTTTTTTTCTTTTTCTTTCCCCTTTTCTATTGCAGTTGGACTTGGAAAAGGGAATGATGGACTGTCTATATGCAAAATGTAAGTTGCACATTTATAGAAATTTTTTGTAATTTTGGTAGAATTCAAAATATGAGAAGTGATATTCTTTGTGGACATGGATACTTATCTATGATCATGTTATAGGCACTCCTTGTATAACAGACTGCGTGATGGCTGAGCTTGAGCGATTAGGTCAGAAGTATCGTGTTGCTCTTAGGTAAGTACGTGTTTCATTTGTGATGTTTTGGAAGATGAATTCTCTATGCTCTCTCATTTTCTGGTACTATACACATGTCACATGTGTGTTCACATTCAGATGCTTTTGAAGTTGGGCTGGAGTTGGTTGATATTGTGTGCACGAGTTTGTGTTTTTCTTTACCTGTTCATCTTCAATTTTGTTGTTGGGGGAAATTCAACAACTCATAATAATTTGGAATGATCTTATCCAAAAAATAATAATTTGGAATGCCAGCACTAATCAAATAGTAGGTTAAAAGAAAAATCTATGAAAAATTTAGTATTATGATTGGAAAGAAATAATATAGGCTTTTAATATACTTTCCGAAATATGATTTTTTGGGAACAATACCATATTGTATGTTTCTCTTTGGTGTTCTCTTTCTTGTTAGTTTTGTGAATATATATATTATATATATATTTTAAACATTACTGCTTGTTTCCTTCTTTTGCATCTCTCTTGTTTGTATTGTTTACTATTTTTGGGCTTGAGCAGAATAGCTAAGGACCCTCGATTTGAGAGACTACCCTGTACTCATAAAGGAACCTATGCTGATGATTGCCTTGTTGAAAGGGTGACTCAGGTGAGAACTGAAGGCTTCTTGCTTATTATACTGTTCGTTGACTATGGGTGTTCCAATTTCATATTTCATTTCTTTTTAATTTCTACTACATTTATCTAGATATCTACTTCTTAGATGGTTGACATTCTCAATACTTAAAAGATATGTATATTTTATATAAGGGAAGTTGGGAGTAACTTGTAACCTAGGAAGTATTTATTACGTAGCTTGGTTCATTTAAATTTTCTTGGATATATGCTGGATCATGGCTCACTTTCAGATACTGCTTTATGTTTGTCCACTTGTATTAGAATTTAGGACATTAGAGTTACTATTGTTTCCAAAAAAACAACTATTTTTCCATAGTAATTTTTGACACTATGGACATGTGCGAAACTTACTTGGGCCAGTTGTCATATTTGCACGCATTGTAGACGCACTGGAGCATGTGAATGCAGGTGAAAAGAGGAAAACTAACATGTTTATTCAGCATTAAATATAGAGTACATAGTAAACCAGTGTAAATTATAGTTCTCTTCTTTCAACTGATGTTCATAATGAAACTAACATATATTTAGTTACAGACTTACAGTATGGTTTATTATATAAATATTTTTAGCTATTAAATACAACAAGGATAACCAACATTGTATTAAGTTATCAGAAAAAAGGGGAACCAAGATCTCACGTTGTATCAGATAAAGATGATAAGAAAAAAGGATGAATTAGTGTTGTGAAGTTGAAGTAGAGATAGTGAGCTACATGCTGCTTTTTCACTGTTTTGGTATGTTTTTAACAGAAGCTTTCTTTTCGTGCAGCATAAGTGTTATATCGTTGCTACTTGTGATAGAGATTTGAAGCGTAGGATTCGCAAGGTATAATCAGACCGTAATAGTTGGCAACACAGGATGTTGGATTTAGATGTAGTAACTCGCCTATTTTCTTGCAGATTCCTGGTGTACCAATCATGTACATAACTCGGCATCAGTATTCAATTGAGCGGTTGCCTGAAGCAACAATTGGAGGAGGTAGGCTTAACATTTCTAGTCCATATAATAAATATTATCGTTTAGAACATAATGCCCTGAATTGTTGCCCTTTATTGATGTATTATTCTCAATTTTATTGAACTTTTGACTTATGAAGGTTTAGTCTATAACAGTTATTCTCAAATTTACTATGCATTTTTTCATACGCCTCACCCAAAAGAAAAAACTTTTTTCTGTGCCGGGCACTTAAGCCCCAAAAGACTATTGCGCCTTGAGCTTTCCAAAACCACCCCGGGGTTCTGGTGTGTTTGGAGAGAGGAATAATAGTATGTGTTGATAGGGACTCAATGATGTTTGATCTTTTGTTGGATTCTTTGTTTTTAAATCTTATTTTACTTAACTAGAGTGAGCCTCTTTCCTAGTCTTTTTTTTGTTTGGCTCTGTTTTTGTGGCCTTGATTTTCTTGTATGCTGTTATATTCTTTTTCTTCTTTCCCGACAAAAATCAATTATTCATTAATTTTTTTTTTCTTGATCAAATAATTGGTGATGCTACCACAAGTGTTCTTATTTTTGACACTTTGACTATTAAGTACATTCTTTAGGTGATGTTCATTATTGATGGTATAATTTTTTATTTTTTATTTTTTAAAAAATGGAGAAATCCCATGAAAAACGTTGAGTAGTAATATTTGACGTTTGTTTTTAATTTTTATTTTATTGTTGATGCAGCTCCAAGGATGTAA

mRNA sequence

ATGGCCGGAATGCAATACAACTTCTTTCCTACAGATTTCTACTACCCTCGTCCACCGTCGCCGCTGCCTAATTCCGTTCAAATCTCCACCAAGCCACCACTGTCTACAGTTGCTCCTCTGCCGAGCAAAACAGTTGAAGACGATCGAGAAGCTGACCGGTCACTCGACAAACCGAAAGCATTGTCGTCGTTGTCGTCGTCTGTGACCATGGACAAGAAGGAGACAGTGAACAAATCCTCCTCTAAGCATCAAAACATTGAAATTGCATCTGAGAAGAGCGAGAGAGAATTTAGACAGCCATTTGGTGGCACAACTTCAATTATTCTTTTTCCTTCAATCAACGAGATGGGGAGGGCGAAGAAAGGACCCAAATTTGCAGTCATGAAGAAGATGGTCACCTCTAAAGCAATTAAGAGCTATAAGGAAGAGGTCTTGAATCCAAAAAGAAAAGATCTTACAAAAGAAAGTCTCCCAAGAAATGTTCCAAATGTTCCTTCGGCACTTTTCTTCAAGTATAACACTGCATTGGGGCCACCTTATCGGGTTTTGGTGGATACAAACTTCATCAATTTCTCCATTCAAAACAAATTGGACTTGGAAAAGGGAATGATGGACTGTCTATATGCAAAATGCACTCCTTGTATAACAGACTGCGTGATGGCTGAGCTTGAGCGATTAGGTCAGAAGTATCGTGTTGCTCTTAGAATAGCTAAGGACCCTCGATTTGAGAGACTACCCTGTACTCATAAAGGAACCTATGCTGATGATTGCCTTGTTGAAAGGGTGACTCAGCATAAGTGTTATATCGTTGCTACTTGTGATAGAGATTTGAAGCGTAGGATTCGCAAGATTCCTGGTGTACCAATCATGTACATAACTCGGCATCAGTATTCAATTGAGCGGTTGCCTGAAGCAACAATTGGAGGAGCTCCAAGGATGTAA

Coding sequence (CDS)

ATGGCCGGAATGCAATACAACTTCTTTCCTACAGATTTCTACTACCCTCGTCCACCGTCGCCGCTGCCTAATTCCGTTCAAATCTCCACCAAGCCACCACTGTCTACAGTTGCTCCTCTGCCGAGCAAAACAGTTGAAGACGATCGAGAAGCTGACCGGTCACTCGACAAACCGAAAGCATTGTCGTCGTTGTCGTCGTCTGTGACCATGGACAAGAAGGAGACAGTGAACAAATCCTCCTCTAAGCATCAAAACATTGAAATTGCATCTGAGAAGAGCGAGAGAGAATTTAGACAGCCATTTGGTGGCACAACTTCAATTATTCTTTTTCCTTCAATCAACGAGATGGGGAGGGCGAAGAAAGGACCCAAATTTGCAGTCATGAAGAAGATGGTCACCTCTAAAGCAATTAAGAGCTATAAGGAAGAGGTCTTGAATCCAAAAAGAAAAGATCTTACAAAAGAAAGTCTCCCAAGAAATGTTCCAAATGTTCCTTCGGCACTTTTCTTCAAGTATAACACTGCATTGGGGCCACCTTATCGGGTTTTGGTGGATACAAACTTCATCAATTTCTCCATTCAAAACAAATTGGACTTGGAAAAGGGAATGATGGACTGTCTATATGCAAAATGCACTCCTTGTATAACAGACTGCGTGATGGCTGAGCTTGAGCGATTAGGTCAGAAGTATCGTGTTGCTCTTAGAATAGCTAAGGACCCTCGATTTGAGAGACTACCCTGTACTCATAAAGGAACCTATGCTGATGATTGCCTTGTTGAAAGGGTGACTCAGCATAAGTGTTATATCGTTGCTACTTGTGATAGAGATTTGAAGCGTAGGATTCGCAAGATTCCTGGTGTACCAATCATGTACATAACTCGGCATCAGTATTCAATTGAGCGGTTGCCTGAAGCAACAATTGGAGGAGCTCCAAGGATGTAA

Protein sequence

MAGMQYNFFPTDFYYPRPPSPLPNSVQISTKPPLSTVAPLPSKTVEDDREADRSLDKPKALSSLSSSVTMDKKETVNKSSSKHQNIEIASEKSEREFRQPFGGTTSIILFPSINEMGRAKKGPKFAVMKKMVTSKAIKSYKEEVLNPKRKDLTKESLPRNVPNVPSALFFKYNTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCITDCVMAELERLGQKYRVALRIAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYITRHQYSIERLPEATIGGAPRM
Homology
[Close]
BLAST of HG10019829 vs. NCBI nr
Match: XP_004136642.1 (rRNA-processing protein FCF1 homolog [Cucumis sativus] >KGN59454.1 hypothetical protein Csa_002627 [Cucumis sativus])

HSP 1 Score: 406.8 bits (1044), Expect = 1.7e-109
Identity = 195/198 (98.48%), Postives = 198/198 (100.00%), Query Frame = 0 

Query: 116 MGRAKKGPKFAVMKKMVTSKAIKSYKEEVLNPKRKDLTKESLPRNVPNVPSALFFKYNTA 175
           MGRAKKGPKFAVMKKMVTSKAIK+YKEEVLNPKRKDLTKE+LPRNVPNVPSALFFKYNTA
Sbjct: 1   MGRAKKGPKFAVMKKMVTSKAIKNYKEEVLNPKRKDLTKENLPRNVPNVPSALFFKYNTA 60

Query: 176 LGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCITDCVMAELERLGQKYRVALR 235
           LGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCITDCVMAELERLGQKYRVALR
Sbjct: 61  LGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCITDCVMAELERLGQKYRVALR 120

Query: 236 IAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYITRH 295
           IAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRK+PGVPIMYITRH
Sbjct: 121 IAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKVPGVPIMYITRH 180

Query: 296 QYSIERLPEATIGGAPRM 314
           QYSIERLPEATIGGAPRM
Sbjct: 181 QYSIERLPEATIGGAPRM 198

[Close]
BLAST of HG10019829 vs. NCBI nr
Match: XP_038903189.1 (rRNA-processing protein FCF1 homolog [Benincasa hispida])

HSP 1 Score: 406.0 bits (1042), Expect = 3.0e-109
Identity = 195/198 (98.48%), Postives = 198/198 (100.00%), Query Frame = 0 

Query: 116 MGRAKKGPKFAVMKKMVTSKAIKSYKEEVLNPKRKDLTKESLPRNVPNVPSALFFKYNTA 175
           MGRAKKGPKFAVMKKMVTSKAIK+YKE+VLNPKRKDLTKE+LPRNVPNVPSALFFKYNTA
Sbjct: 1   MGRAKKGPKFAVMKKMVTSKAIKNYKEQVLNPKRKDLTKENLPRNVPNVPSALFFKYNTA 60

Query: 176 LGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCITDCVMAELERLGQKYRVALR 235
           LGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCITDCVMAELERLGQKYRVALR
Sbjct: 61  LGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCITDCVMAELERLGQKYRVALR 120

Query: 236 IAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYITRH 295
           IAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYITRH
Sbjct: 121 IAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYITRH 180

Query: 296 QYSIERLPEATIGGAPRM 314
           QYSIERLPEATIGGAPRM
Sbjct: 181 QYSIERLPEATIGGAPRM 198

[Close]
BLAST of HG10019829 vs. NCBI nr
Match: XP_022158778.1 (rRNA-processing protein FCF1 homolog [Momordica charantia] >XP_022158779.1 rRNA-processing protein FCF1 homolog [Momordica charantia])

HSP 1 Score: 403.3 bits (1035), Expect = 1.9e-108
Identity = 192/198 (96.97%), Postives = 198/198 (100.00%), Query Frame = 0 

Query: 116 MGRAKKGPKFAVMKKMVTSKAIKSYKEEVLNPKRKDLTKESLPRNVPNVPSALFFKYNTA 175
           MG+AKKGPKFAVMKKMVTSKAIK+YK+EVLNPK+KDLTKE+LPRNVPNVPSALFFKYNTA
Sbjct: 1   MGKAKKGPKFAVMKKMVTSKAIKNYKQEVLNPKKKDLTKENLPRNVPNVPSALFFKYNTA 60

Query: 176 LGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCITDCVMAELERLGQKYRVALR 235
           LGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCITDCVMAELERLGQKYRVALR
Sbjct: 61  LGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCITDCVMAELERLGQKYRVALR 120

Query: 236 IAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYITRH 295
           IAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRK+PGVPIMYITRH
Sbjct: 121 IAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKVPGVPIMYITRH 180

Query: 296 QYSIERLPEATIGGAPRM 314
           QYSIERLPEATIGGAPRM
Sbjct: 181 QYSIERLPEATIGGAPRM 198

[Close]
BLAST of HG10019829 vs. NCBI nr
Match: XP_008443271.1 (PREDICTED: rRNA-processing protein FCF1 homolog [Cucumis melo] >XP_008443272.1 PREDICTED: rRNA-processing protein FCF1 homolog [Cucumis melo])

HSP 1 Score: 402.9 bits (1034), Expect = 2.5e-108
Identity = 193/198 (97.47%), Postives = 198/198 (100.00%), Query Frame = 0 

Query: 116 MGRAKKGPKFAVMKKMVTSKAIKSYKEEVLNPKRKDLTKESLPRNVPNVPSALFFKYNTA 175
           MGRAKKGPKFAVMKK+VTSKAIK+YK+EVLNPKRKDLTKE+LPRNVPNVPSALFFK+NTA
Sbjct: 1   MGRAKKGPKFAVMKKLVTSKAIKNYKQEVLNPKRKDLTKENLPRNVPNVPSALFFKHNTA 60

Query: 176 LGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCITDCVMAELERLGQKYRVALR 235
           LGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCITDCVMAELERLGQKYRVALR
Sbjct: 61  LGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCITDCVMAELERLGQKYRVALR 120

Query: 236 IAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYITRH 295
           IAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYITRH
Sbjct: 121 IAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYITRH 180

Query: 296 QYSIERLPEATIGGAPRM 314
           QYSIERLPEATIGGAPRM
Sbjct: 181 QYSIERLPEATIGGAPRM 198

[Close]
BLAST of HG10019829 vs. NCBI nr
Match: XP_022935178.1 (rRNA-processing protein FCF1 homolog [Cucurbita moschata] >XP_022983875.1 rRNA-processing protein FCF1 homolog [Cucurbita maxima] >XP_022983876.1 rRNA-processing protein FCF1 homolog [Cucurbita maxima] >KAG6580887.1 rRNA-processing protein FCF1-like protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7017645.1 rRNA-processing protein FCF1-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 402.1 bits (1032), Expect = 4.3e-108
Identity = 191/198 (96.46%), Postives = 198/198 (100.00%), Query Frame = 0 

Query: 116 MGRAKKGPKFAVMKKMVTSKAIKSYKEEVLNPKRKDLTKESLPRNVPNVPSALFFKYNTA 175
           MGRAKKGPKFAV+KKM++SKAIK+YKEEVLNPKRKDLTKE+LPRN+PNVPSALFFKYNTA
Sbjct: 1   MGRAKKGPKFAVVKKMISSKAIKNYKEEVLNPKRKDLTKENLPRNIPNVPSALFFKYNTA 60

Query: 176 LGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCITDCVMAELERLGQKYRVALR 235
           LGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCITDCVMAELERLGQKYRVALR
Sbjct: 61  LGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCITDCVMAELERLGQKYRVALR 120

Query: 236 IAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYITRH 295
           IAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYITRH
Sbjct: 121 IAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYITRH 180

Query: 296 QYSIERLPEATIGGAPRM 314
           QYSIERLPEAT+GGAPRM
Sbjct: 181 QYSIERLPEATMGGAPRM 198

[Close]
BLAST of HG10019829 vs. ExPASy Swiss-Prot
Match: Q32PD0 (rRNA-processing protein FCF1 homolog OS=Bos taurus OX=9913 GN=FCF1 PE=2 SV=1)

HSP 1 Score: 287.3 bits (734), Expect = 2.0e-76
Identity = 140/199 (70.35%), Postives = 164/199 (82.41%), Query Frame = 0 

Query: 116 MGRAKKGPKFAVMKKMVTSKAIKSYKEEVLNPKRKDLTKESL--PRNVPNVPSALFFKYN 175
           MG+ KK  K+A MK+M++ +  +  +++ L PK+K+    S    R VP  PS LFF+YN
Sbjct: 1   MGKQKKTRKYATMKRMLSLRDQRLKEKDRLKPKKKEKKDPSALKEREVPQHPSCLFFQYN 60

Query: 176 TALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCITDCVMAELERLGQKYRVA 235
           T LGPPY +LVDTNFINFSI+ KLDL + MMDCLYAKC PCITDCVMAE+E+LGQKYRVA
Sbjct: 61  TQLGPPYHILVDTNFINFSIKAKLDLVQSMMDCLYAKCIPCITDCVMAEIEKLGQKYRVA 120

Query: 236 LRIAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYIT 295
           LRIAKDPRFERLPCTHKGTYADDCLV+RVTQHKCYIVAT DRDLKRRIRKIPGVPIMYI+
Sbjct: 121 LRIAKDPRFERLPCTHKGTYADDCLVQRVTQHKCYIVATVDRDLKRRIRKIPGVPIMYIS 180

Query: 296 RHQYSIERLPEATIGGAPR 313
            H+Y+IER+P+    GAPR
Sbjct: 181 NHRYNIERMPDDY--GAPR 197

[Close]
BLAST of HG10019829 vs. ExPASy Swiss-Prot
Match: Q9Y324 (rRNA-processing protein FCF1 homolog OS=Homo sapiens OX=9606 GN=FCF1 PE=1 SV=1)

HSP 1 Score: 287.3 bits (734), Expect = 2.0e-76
Identity = 140/199 (70.35%), Postives = 164/199 (82.41%), Query Frame = 0 

Query: 116 MGRAKKGPKFAVMKKMVTSKAIKSYKEEVLNPKRKDLTKESL--PRNVPNVPSALFFKYN 175
           MG+ KK  K+A MK+M++ +  +  +++ L PK+K+    S    R VP  PS LFF+YN
Sbjct: 1   MGKQKKTRKYATMKRMLSLRDQRLKEKDRLKPKKKEKKDPSALKEREVPQHPSCLFFQYN 60

Query: 176 TALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCITDCVMAELERLGQKYRVA 235
           T LGPPY +LVDTNFINFSI+ KLDL + MMDCLYAKC PCITDCVMAE+E+LGQKYRVA
Sbjct: 61  TQLGPPYHILVDTNFINFSIKAKLDLVQSMMDCLYAKCIPCITDCVMAEIEKLGQKYRVA 120

Query: 236 LRIAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYIT 295
           LRIAKDPRFERLPCTHKGTYADDCLV+RVTQHKCYIVAT DRDLKRRIRKIPGVPIMYI+
Sbjct: 121 LRIAKDPRFERLPCTHKGTYADDCLVQRVTQHKCYIVATVDRDLKRRIRKIPGVPIMYIS 180

Query: 296 RHQYSIERLPEATIGGAPR 313
            H+Y+IER+P+    GAPR
Sbjct: 181 NHRYNIERMPDDY--GAPR 197

[Close]
BLAST of HG10019829 vs. ExPASy Swiss-Prot
Match: Q5RFQ0 (rRNA-processing protein FCF1 homolog OS=Pongo abelii OX=9601 GN=FCF1 PE=2 SV=1)

HSP 1 Score: 287.3 bits (734), Expect = 2.0e-76
Identity = 140/199 (70.35%), Postives = 164/199 (82.41%), Query Frame = 0 

Query: 116 MGRAKKGPKFAVMKKMVTSKAIKSYKEEVLNPKRKDLTKESL--PRNVPNVPSALFFKYN 175
           MG+ KK  K+A MK+M++ +  +  +++ L PK+K+    S    R VP  PS LFF+YN
Sbjct: 1   MGKQKKTRKYATMKRMLSLRDQRLKEKDRLKPKKKEKKDPSALKEREVPQHPSCLFFQYN 60

Query: 176 TALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCITDCVMAELERLGQKYRVA 235
           T LGPPY +LVDTNFINFSI+ KLDL + MMDCLYAKC PCITDCVMAE+E+LGQKYRVA
Sbjct: 61  TQLGPPYHILVDTNFINFSIKAKLDLVQSMMDCLYAKCIPCITDCVMAEIEKLGQKYRVA 120

Query: 236 LRIAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYIT 295
           LRIAKDPRFERLPCTHKGTYADDCLV+RVTQHKCYIVAT DRDLKRRIRKIPGVPIMYI+
Sbjct: 121 LRIAKDPRFERLPCTHKGTYADDCLVQRVTQHKCYIVATVDRDLKRRIRKIPGVPIMYIS 180

Query: 296 RHQYSIERLPEATIGGAPR 313
            H+Y+IER+P+    GAPR
Sbjct: 181 NHRYNIERMPDDY--GAPR 197

[Close]
BLAST of HG10019829 vs. ExPASy Swiss-Prot
Match: Q9CTH6 (rRNA-processing protein FCF1 homolog OS=Mus musculus OX=10090 GN=Fcf1 PE=2 SV=2)

HSP 1 Score: 283.9 bits (725), Expect = 2.2e-75
Identity = 137/199 (68.84%), Postives = 164/199 (82.41%), Query Frame = 0 

Query: 116 MGRAKKGPKFAVMKKMVTSKAIKSYKEEVLNPKRKDLTKESL--PRNVPNVPSALFFKYN 175
           MG+ KK  K+A MK+M++ +  +  +++ L PK+K+    S    R VP  PS LFF+YN
Sbjct: 1   MGKQKKTRKYATMKRMLSLRDERLKEKDRLKPKKKEKKDPSALKEREVPQHPSCLFFQYN 60

Query: 176 TALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCITDCVMAELERLGQKYRVA 235
           T LGPPY +LVDTNFINFSI+ KLDL + MMDCLYAKC PCITDCVMAE+E+LGQK+RVA
Sbjct: 61  TQLGPPYHILVDTNFINFSIKAKLDLVQSMMDCLYAKCIPCITDCVMAEIEKLGQKFRVA 120

Query: 236 LRIAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYIT 295
           LRIAKDPRF+RLPCTHKGTYADDCLV+RVTQHKCYIVAT DRDLKRRIRKIPGVPIMY++
Sbjct: 121 LRIAKDPRFDRLPCTHKGTYADDCLVQRVTQHKCYIVATVDRDLKRRIRKIPGVPIMYLS 180

Query: 296 RHQYSIERLPEATIGGAPR 313
            H+Y+IER+P+    GAPR
Sbjct: 181 NHRYNIERMPDDY--GAPR 197

[Close]
BLAST of HG10019829 vs. ExPASy Swiss-Prot
Match: Q05498 (rRNA-processing protein FCF1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=FCF1 PE=1 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 6.7e-64
Identity = 117/189 (61.90%), Postives = 147/189 (77.78%), Query Frame = 0 

Query: 116 MGRAKKGPKFAVMKKMVTSKAIKSYKEEVLNPKRKDLTKESLPRNVPNVPSALFFKYNTA 175
           MG+AKK  KF ++K+ + +K  +  K+   N K K+     L RN+P V SALFF+YN A
Sbjct: 1   MGKAKKTRKFGLVKRTLNTKKDQRLKKNQENIKTKE--DPELTRNIPQVSSALFFQYNQA 60

Query: 176 LGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCITDCVMAELERLGQKYRVALR 235
           + PPY+VL+DTNFINFSIQ K+D+ +GMMDCL AKC P ITDCVMAELE+LG KYR+AL+
Sbjct: 61  IKPPYQVLIDTNFINFSIQKKVDIVRGMMDCLLAKCNPLITDCVMAELEKLGPKYRIALK 120

Query: 236 IAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYITRH 295
           +A+DPR +RL C+HKGTYADDCLV RV QHKCYIVAT D  LK+RIRKIPG+P+M +  H
Sbjct: 121 LARDPRIKRLSCSHKGTYADDCLVHRVLQHKCYIVATNDAGLKQRIRKIPGIPLMSVGGH 180

Query: 296 QYSIERLPE 305
            Y IE+LP+
Sbjct: 181 AYVIEKLPD 187

[Close]
BLAST of HG10019829 vs. ExPASy TrEMBL
Match: A0A0A0LEW8 (PINc domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G821570 PE=3 SV=1)

HSP 1 Score: 406.8 bits (1044), Expect = 8.4e-110
Identity = 195/198 (98.48%), Postives = 198/198 (100.00%), Query Frame = 0 

Query: 116 MGRAKKGPKFAVMKKMVTSKAIKSYKEEVLNPKRKDLTKESLPRNVPNVPSALFFKYNTA 175
           MGRAKKGPKFAVMKKMVTSKAIK+YKEEVLNPKRKDLTKE+LPRNVPNVPSALFFKYNTA
Sbjct: 1   MGRAKKGPKFAVMKKMVTSKAIKNYKEEVLNPKRKDLTKENLPRNVPNVPSALFFKYNTA 60

Query: 176 LGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCITDCVMAELERLGQKYRVALR 235
           LGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCITDCVMAELERLGQKYRVALR
Sbjct: 61  LGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCITDCVMAELERLGQKYRVALR 120

Query: 236 IAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYITRH 295
           IAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRK+PGVPIMYITRH
Sbjct: 121 IAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKVPGVPIMYITRH 180

Query: 296 QYSIERLPEATIGGAPRM 314
           QYSIERLPEATIGGAPRM
Sbjct: 181 QYSIERLPEATIGGAPRM 198

[Close]
BLAST of HG10019829 vs. ExPASy TrEMBL
Match: A0A6J1DX25 (rRNA-processing protein FCF1 homolog OS=Momordica charantia OX=3673 GN=LOC111025245 PE=3 SV=1)

HSP 1 Score: 403.3 bits (1035), Expect = 9.3e-109
Identity = 192/198 (96.97%), Postives = 198/198 (100.00%), Query Frame = 0 

Query: 116 MGRAKKGPKFAVMKKMVTSKAIKSYKEEVLNPKRKDLTKESLPRNVPNVPSALFFKYNTA 175
           MG+AKKGPKFAVMKKMVTSKAIK+YK+EVLNPK+KDLTKE+LPRNVPNVPSALFFKYNTA
Sbjct: 1   MGKAKKGPKFAVMKKMVTSKAIKNYKQEVLNPKKKDLTKENLPRNVPNVPSALFFKYNTA 60

Query: 176 LGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCITDCVMAELERLGQKYRVALR 235
           LGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCITDCVMAELERLGQKYRVALR
Sbjct: 61  LGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCITDCVMAELERLGQKYRVALR 120

Query: 236 IAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYITRH 295
           IAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRK+PGVPIMYITRH
Sbjct: 121 IAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKVPGVPIMYITRH 180

Query: 296 QYSIERLPEATIGGAPRM 314
           QYSIERLPEATIGGAPRM
Sbjct: 181 QYSIERLPEATIGGAPRM 198

[Close]
BLAST of HG10019829 vs. ExPASy TrEMBL
Match: A0A1S3B8E3 (rRNA-processing protein FCF1 homolog OS=Cucumis melo OX=3656 GN=LOC103486894 PE=3 SV=1)

HSP 1 Score: 402.9 bits (1034), Expect = 1.2e-108
Identity = 193/198 (97.47%), Postives = 198/198 (100.00%), Query Frame = 0 

Query: 116 MGRAKKGPKFAVMKKMVTSKAIKSYKEEVLNPKRKDLTKESLPRNVPNVPSALFFKYNTA 175
           MGRAKKGPKFAVMKK+VTSKAIK+YK+EVLNPKRKDLTKE+LPRNVPNVPSALFFK+NTA
Sbjct: 1   MGRAKKGPKFAVMKKLVTSKAIKNYKQEVLNPKRKDLTKENLPRNVPNVPSALFFKHNTA 60

Query: 176 LGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCITDCVMAELERLGQKYRVALR 235
           LGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCITDCVMAELERLGQKYRVALR
Sbjct: 61  LGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCITDCVMAELERLGQKYRVALR 120

Query: 236 IAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYITRH 295
           IAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYITRH
Sbjct: 121 IAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYITRH 180

Query: 296 QYSIERLPEATIGGAPRM 314
           QYSIERLPEATIGGAPRM
Sbjct: 181 QYSIERLPEATIGGAPRM 198

[Close]
BLAST of HG10019829 vs. ExPASy TrEMBL
Match: A0A6J1J3K9 (rRNA-processing protein FCF1 homolog OS=Cucurbita maxima OX=3661 GN=LOC111482358 PE=3 SV=1)

HSP 1 Score: 402.1 bits (1032), Expect = 2.1e-108
Identity = 191/198 (96.46%), Postives = 198/198 (100.00%), Query Frame = 0 

Query: 116 MGRAKKGPKFAVMKKMVTSKAIKSYKEEVLNPKRKDLTKESLPRNVPNVPSALFFKYNTA 175
           MGRAKKGPKFAV+KKM++SKAIK+YKEEVLNPKRKDLTKE+LPRN+PNVPSALFFKYNTA
Sbjct: 1   MGRAKKGPKFAVVKKMISSKAIKNYKEEVLNPKRKDLTKENLPRNIPNVPSALFFKYNTA 60

Query: 176 LGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCITDCVMAELERLGQKYRVALR 235
           LGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCITDCVMAELERLGQKYRVALR
Sbjct: 61  LGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCITDCVMAELERLGQKYRVALR 120

Query: 236 IAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYITRH 295
           IAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYITRH
Sbjct: 121 IAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYITRH 180

Query: 296 QYSIERLPEATIGGAPRM 314
           QYSIERLPEAT+GGAPRM
Sbjct: 181 QYSIERLPEATMGGAPRM 198

[Close]
BLAST of HG10019829 vs. ExPASy TrEMBL
Match: A0A6J1F9T9 (rRNA-processing protein FCF1 homolog OS=Cucurbita moschata OX=3662 GN=LOC111442132 PE=3 SV=1)

HSP 1 Score: 402.1 bits (1032), Expect = 2.1e-108
Identity = 191/198 (96.46%), Postives = 198/198 (100.00%), Query Frame = 0 

Query: 116 MGRAKKGPKFAVMKKMVTSKAIKSYKEEVLNPKRKDLTKESLPRNVPNVPSALFFKYNTA 175
           MGRAKKGPKFAV+KKM++SKAIK+YKEEVLNPKRKDLTKE+LPRN+PNVPSALFFKYNTA
Sbjct: 1   MGRAKKGPKFAVVKKMISSKAIKNYKEEVLNPKRKDLTKENLPRNIPNVPSALFFKYNTA 60

Query: 176 LGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCITDCVMAELERLGQKYRVALR 235
           LGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCITDCVMAELERLGQKYRVALR
Sbjct: 61  LGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCITDCVMAELERLGQKYRVALR 120

Query: 236 IAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYITRH 295
           IAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYITRH
Sbjct: 121 IAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYITRH 180

Query: 296 QYSIERLPEATIGGAPRM 314
           QYSIERLPEAT+GGAPRM
Sbjct: 181 QYSIERLPEATMGGAPRM 198

[Close]
BLAST of HG10019829 vs. TAIR 10
Match: AT2G46230.1 (PIN domain-like family protein )

HSP 1 Score: 343.6 bits (880), Expect = 1.7e-94
Identity = 162/197 (82.23%), Postives = 180/197 (91.37%), Query Frame = 0 

Query: 116 MGRAKKGPKFAVMKKMVTSKAIKSYKEEVLNPKRKDLTKESLPRNVPNVPSALFFKYNTA 175
           MG+AKK  KFAV+KKM++ KA+K YKEEVLNP +KDLT+  LPRNVP+VP+ LFF YN+ 
Sbjct: 1   MGKAKKPQKFAVVKKMISHKALKHYKEEVLNPNKKDLTE--LPRNVPSVPAGLFFSYNST 60

Query: 176 LGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCITDCVMAELERLGQKYRVALR 235
           L PPYRVLVDTNFINFSIQNK+DLEKGM DCLYA CTPCITDCVMAELE+LGQKYRVALR
Sbjct: 61  LVPPYRVLVDTNFINFSIQNKIDLEKGMRDCLYANCTPCITDCVMAELEKLGQKYRVALR 120

Query: 236 IAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYITRH 295
           IAKDP FERLPC HKGTYADDCLV+RVTQHKC+IVATCDRDLKRRIRKIPGVPIMY+T  
Sbjct: 121 IAKDPHFERLPCIHKGTYADDCLVDRVTQHKCFIVATCDRDLKRRIRKIPGVPIMYVTNR 180

Query: 296 QYSIERLPEATIGGAPR 313
           +YSIE+LPEAT+GGAPR
Sbjct: 181 KYSIEKLPEATLGGAPR 195

[Close]
BLAST of HG10019829 vs. TAIR 10
Match: AT2G46230.2 (PIN domain-like family protein )

HSP 1 Score: 293.5 bits (750), Expect = 2.0e-79
Identity = 139/169 (82.25%), Postives = 154/169 (91.12%), Query Frame = 0 

Query: 116 MGRAKKGPKFAVMKKMVTSKAIKSYKEEVLNPKRKDLTKESLPRNVPNVPSALFFKYNTA 175
           MG+AKK  KFAV+KKM++ KA+K YKEEVLNP +KDLT+  LPRNVP+VP+ LFF YN+ 
Sbjct: 1   MGKAKKPQKFAVVKKMISHKALKHYKEEVLNPNKKDLTE--LPRNVPSVPAGLFFSYNST 60

Query: 176 LGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCITDCVMAELERLGQKYRVALR 235
           L PPYRVLVDTNFINFSIQNK+DLEKGM DCLYA CTPCITDCVMAELE+LGQKYRVALR
Sbjct: 61  LVPPYRVLVDTNFINFSIQNKIDLEKGMRDCLYANCTPCITDCVMAELEKLGQKYRVALR 120

Query: 236 IAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKI 285
           IAKDP FERLPC HKGTYADDCLV+RVTQHKC+IVATCDRDLKRRIRK+
Sbjct: 121 IAKDPHFERLPCIHKGTYADDCLVDRVTQHKCFIVATCDRDLKRRIRKV 167

[Close]
BLAST of HG10019829 vs. TAIR 10
Match: AT1G26530.1 (PIN domain-like family protein )

HSP 1 Score: 265.8 bits (678), Expect = 4.5e-71
Identity = 136/197 (69.04%), Postives = 155/197 (78.68%), Query Frame = 0 

Query: 116 MGRAKKGPKFAVMKKMVTSKAIKSYKEEVLNPKRKDLTKESLPRNVPNVPSALFFKYNTA 175
           MGR KK  KFAVMK M++ KA+K YKEEVLNP +KDLT+  LPRNVP+VPS LFF +N++
Sbjct: 1   MGRTKKPQKFAVMKMMISHKALKHYKEEVLNPNKKDLTE--LPRNVPSVPSGLFFSHNSS 60

Query: 176 LGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCITDCVMAELERLGQKYRVALR 235
           L PPYRVLVDTNFINFSIQNK+DLEKGM                M  + ++   Y     
Sbjct: 61  LVPPYRVLVDTNFINFSIQNKIDLEKGM----------------MVFVRKMHSLYYGL-- 120

Query: 236 IAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYITRH 295
           IAKDPRFERLPC  KGTYADDCLV+RVTQHKC+IVATCDRDLKRRIRKIPGVPIMY+T+ 
Sbjct: 121 IAKDPRFERLPCVLKGTYADDCLVDRVTQHKCFIVATCDRDLKRRIRKIPGVPIMYVTQR 177

Query: 296 QYSIERLPEATIGGAPR 313
           +YSIE+LPEATIGGAPR
Sbjct: 181 KYSIEKLPEATIGGAPR 177

[Close]
BLAST of HG10019829 vs. TAIR 10
Match: AT2G34570.1 (PIN domain-like family protein )

HSP 1 Score: 55.1 bits (131), Expect = 1.2e-07
Identity = 39/149 (26.17%), Postives = 73/149 (48.99%), Query Frame = 0 

Query: 159 RNVPNVPSALFFKYNTALGPPYRVLVDTNFINFSIQNKL-DLEKGMMDCLYAKCTPCITD 218
           R   N  +  FF        PY+VL D  F++  + N++   +  + + L        T 
Sbjct: 5   RQKKNRRTVRFFTVCYGFRQPYKVLCDGTFVHHLVTNEITPADTAVSELLGGPVKLFTTR 64

Query: 219 CVMAELERLGQKYRVALRIAKDPRFERLPCTH-KGTYADDCLVERV----TQHKCYIVAT 278
           CV+AELE+LG+ +  +L  A+        C H +   AD+CL E +    T+H  + + T
Sbjct: 65  CVIAELEKLGKDFAESLEAAQ--TLNTATCEHEEAKTADECLSEVIGVQNTEH--FFLGT 124

Query: 279 CDRDLKRRIRKIPGVPIMYITRHQYSIER 302
            D + +R++++   VP+++  R+   I++
Sbjct: 125 QDAEFRRKLQQESIVPLVFGLRNILLIDQ 149

The following BLAST results are available for this feature:
BLAST of HG10019829 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004136642.11.7e-10998.48rRNA-processing protein FCF1 homolog [Cucumis sativus] >KGN59454.1 hypothetical ... [more]
XP_038903189.13.0e-10998.48rRNA-processing protein FCF1 homolog [Benincasa hispida][more]
XP_022158778.11.9e-10896.97rRNA-processing protein FCF1 homolog [Momordica charantia] >XP_022158779.1 rRNA-... [more]
XP_008443271.12.5e-10897.47PREDICTED: rRNA-processing protein FCF1 homolog [Cucumis melo] >XP_008443272.1 P... [more]
XP_022935178.14.3e-10896.46rRNA-processing protein FCF1 homolog [Cucurbita moschata] >XP_022983875.1 rRNA-p... [more]
BLAST of HG10019829 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q32PD02.0e-7670.35rRNA-processing protein FCF1 homolog OS=Bos taurus OX=9913 GN=FCF1 PE=2 SV=1[more]
Q9Y3242.0e-7670.35rRNA-processing protein FCF1 homolog OS=Homo sapiens OX=9606 GN=FCF1 PE=1 SV=1[more]
Q5RFQ02.0e-7670.35rRNA-processing protein FCF1 homolog OS=Pongo abelii OX=9601 GN=FCF1 PE=2 SV=1[more]
Q9CTH62.2e-7568.84rRNA-processing protein FCF1 homolog OS=Mus musculus OX=10090 GN=Fcf1 PE=2 SV=2[more]
Q054986.7e-6461.90rRNA-processing protein FCF1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S... [more]
BLAST of HG10019829 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LEW88.4e-11098.48PINc domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G821570 PE=3 S... [more]
A0A6J1DX259.3e-10996.97rRNA-processing protein FCF1 homolog OS=Momordica charantia OX=3673 GN=LOC111025... [more]
A0A1S3B8E31.2e-10897.47rRNA-processing protein FCF1 homolog OS=Cucumis melo OX=3656 GN=LOC103486894 PE=... [more]
A0A6J1J3K92.1e-10896.46rRNA-processing protein FCF1 homolog OS=Cucurbita maxima OX=3661 GN=LOC111482358... [more]
A0A6J1F9T92.1e-10896.46rRNA-processing protein FCF1 homolog OS=Cucurbita moschata OX=3662 GN=LOC1114421... [more]
BLAST of HG10019829 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G46230.11.7e-9482.23PIN domain-like family protein [more]
AT2G46230.22.0e-7982.25PIN domain-like family protein [more]
AT1G26530.14.5e-7169.04PIN domain-like family protein [more]
AT2G34570.11.2e-0726.17PIN domain-like family protein [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002716PIN domainSMARTSM00670PIN_9coord: 180..279
e-value: 8.6E-15
score: 65.1
IPR006984rRNA-processing protein Fcf1/Utp23PFAMPF04900Fcf1coord: 205..301
e-value: 1.7E-39
score: 134.2
NoneNo IPR availableGENE3D3.40.50.1010coord: 166..307
e-value: 4.7E-50
score: 171.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 19..95
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 59..74
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 75..95
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 43..57
NoneNo IPR availablePANTHERPTHR12416UNCHARACTERIZEDcoord: 116..312
NoneNo IPR availablePANTHERPTHR12416:SF2RRNA-PROCESSING PROTEIN FCF1 HOMOLOGcoord: 116..312
IPR037503rRNA-processing protein Fcf1, PIN domainCDDcd09864PIN_Fcf1-likecoord: 170..300
e-value: 5.026E-108
score: 308.31
IPR029060PIN-like domain superfamilySUPERFAMILY88723PIN domain-likecoord: 178..302

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10019829.1HG10019829.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006364 rRNA processing
cellular_component GO:0005730 nucleolus
cellular_component GO:0032040 small-subunit processome