HG10019731 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10019731
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Vesicle transport v-SNARE family protein
Location	Chr04: 24933782 .. 24944255 (+)
RNA-Seq Expression	HG10019731
Synteny	HG10019731

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCGAGGTATTCGAAGGATACGAGCGTCAATATTGCGAGCTTTCTGCCAATCTTTCCAGAAAGTGCACCTCCGCCAGTGCCCTAGACGGAGGTATAATGATCCAATTCTTCTTTTCTGAGTATCCATACTCGTTATTGTCTCTCAAGTGTGTTAAATACTGCGATTTTCTTGGATTTTCTTTGGAGTTTGATTGTTTTTGTTTCCTTCGTGATTCTGCAGAGCAGAAGAAGCAAAAGCTTTCTGAGATAAAAGGTGGTATTGATGAAGCCGAATCTCTGGTACTTGTACAAGTTTTTCGCACTAATTGAATTGGAATTTTACACTAAATTATTGACTTAACCTAAAGCTTATTGCAATTCTTTAGATACGGAAAATGAATCTCGACGCAAGGAGTTTGCAGCCCAGTGTAAAGGCTGTTCTTCTTGCTAAGCTAAGGGAGTATAAATCGGATTTGAGCAATCTCAAAAGTGAAGTAAAACGAATTACGTTGGGCAACTTAAATGCAGCTGCACGCGATGAGCTGCTGGAATCTGGATTGGCTGATACCTTCACTGTATGGATATATTTACTTGCTTGACCTCTTCTTGCAAATTGGTGTCATATGCAGGGACGTGATTGACCCTACATCCTGGAAAATGCATATTTACTCTTCTTTTTTGCTTCTATGTATGATTCTTAAAATATTGGAAGTTGTTTACTTGTTTGTGTATAAAATAAATTTAATCGACTTTTTGTTTGGGTAACGGAGTTCAAGAAACCATTAAGGGGTTGTTTGTGAGGTTGAAATGTAATTAGGATTACAGTAATTAGAGGAGTGTTGGAATGCGTGAGGTATCAAGGGCGGAACGAAAATGAGATTGTGAAACATGAAAACAGCAGGAAAGAGAGTTTGGTTAAAAACTGTCGGAACGGAATGAGTTTAATATTACAAATTGGGCCCAAAACGCTCAGTTCAAACATGAGTTTTTTATTATATTACAATTCAAACTCATTCCATTACGAGCCTCCAAACAGCATGGGTTGGCCTAGTGGGAAATAAAGGGCATGACTTTGATAAAGGACTAAGAGGTCATAGATTGAATCCTAGTGACCACCTACTTAGGATTTAATATCTTACGAGTTTTCTAGACACCCAAATATTGTAGGGTCGGGTGGGTTCTACTAGACACTCACGAATATCAAAAGAAGAAAAAAAAAACCATTGACTGTACAAATCATTACTTGTTAGTTCTAGTTCTGACAATCCACCAAGAATTAAAAACATGTTCAAGCTATATATTGGTTGAGTGTTGCTTGTAGTTGGGTGAGAAAGTCTGCATGATTAGAAGGTAGGTATTGAGAGAAAATGTGAGAGAGATTAATGAGACAAGGTGTGTGTAGAGAAAGCTAGAGCAAAAAAGTGTATAGAGAGAATTTAGTGGGAGAAAGCATGTGGAGTGTAATTAAAGAAAGAAAATGTGTTATGAGAGGTTGAGTATGAAGTGGTTAAGTAAATTCCATTTGATAAATCAGCTATCAATTGTTTCTTTAAAAGCACATCTTAATGCTTTAGCTTTTTAAAAGTGCTTCTAAATTGTAGTGAATGGTAGATTAATAGGAAGTTCTTTTAACCATCTAAAAGTATTTATGCCATGGTTCAGAGCATTCTCAAACATAGCCAGTTTAGGAAAGATTTTTACATGTTAGCTTCTACTGATTTGATAACTTATGTTTTTGGGTGGAGTTTACTAAAATGTGGATTTATGCCCATCTACTGATTTGATAACTTATGTTTTTGGGAGGAGTTTGCTAAAATGTGGATTTACGTGCTGATGCTTAAGTTTTCAAATCTATTTGCTTTATCTTCCCTTTCTCTCTGAAATTTATGGAGCAATCTTCTAATACTGAGGATGAAAACATAACCTTTAGGTCTCAGCTGATCAAAGAACTAGACTAATGACCACAACAGAGAGATTAGGCAATATGAGTGACAGGATTAAGGATAGTCAAAGAACTATGCTCGAAACTGAAGACCTTGGTGTCTCAATCCTAGAAGACTTGCATTCACAGAGACAATCACTTTTGCGTGGCCATGACACGGTAATCCTTCTCATTAGCTGGAAACTGTCAATAAATCTTGCTTTAGTTAGTTTCTTTGTCTTTCCTTTTGCAGTTAATCTCTCTCGTCTTAAAATACATTGGTGCTTTCAGCATTTCATTATCCTTGACCTCTTTTTCGACTGAAAGATATGTCATTGTGACAGCATTTACGATACTTTTTCCTCTTCCCTTAGCAACCATAGATTAATATCATGTTGTTATTTAATTAATTGCACGTCTTCTTGGCAGAAAATAGGTATCTATCCTCCGATTGTAAATCTGTAATTCGTTTTTCTTATTGAAATTAGGGAAAGAAAAAAATAACTTCGTTCGCCATTTCATCAGCACCAAAATGAATTCAATATAATCACGTAATTGCTGCCTTTTTTTTTTTTTTTTTAATCTTCCTCTGTTTGCAGCTTCATGGTGTGGATGATAACGTAGGAAGAAGCAAAAGAATTTTAACCAATATGACAAGGAGGATGAACAAAAATAAGTGGACAATTTCCTGCATAGTTACTGTCCTTGTTATTGCCATCATTGTGATATTATACGTCAAACTTAAATAGGTAAAGACATTCCTGGTACAAAGTTACTTTCACCTTTTTTTTTTTTTTTTGGATGTGAGCTTGCTGTTGGGAGATTAGTTGATGGTCATTTTCAACTCCTTGTTTCTCTGTCTGTTACTATTCTGTGGAATGTATAAAGAAATCTCTCTTTTACACAGAACATGAGATGGGTTTTGTCATGGATAGTTTTTATCCTTGTTTCTTAGGCGGGTTTTGATTTTTCAAAACATGGATATTAATTGTCTAGGATAAGAAAAAAAAAAGTTCCTCTAAACATGGATTTTTATTAATCACTTGGATGGTGGGTTTTGGGGTTCTGAGTTCTTATCTGTAGTTTTCTGAGTATGAGATGGAAAAGATTTTTGAAGTTTTGGATCTTCTGAAAAGAAAAATGGACATTCATTTTTGTTTTGTTACTTTTTAAAATTATATACGTACATTCTCTGTTCTTATTCTTGTTTAGCTTATGACGGTTTTTTCCCTTTCCCTCTCTTTTCCCCTGCCTCGTTTGGGAGACAAGGTGGGTCTCCTTGGGGAAAAAGACATTGATATTGATATATGAAATACATTAGTGATTATATGTTAGTTTTTGGTATATCATTGATATAACTATAACGGTTATATATATTCGAAAAGGTTTTCTTTTTGGCTATATTTTCAACTCAGAGAGTTAGTTACTATATTTATAATTAACTATTTACCTATATAAATATTATGGGTGATCATCGGTCGGTTTTATTGATCTAATTCCAAATATGACATATATCAATGCCTGGTATACTATGTCATTGTAGTTGATATTAACTACAATTAACGTATAGTATTAGAGTTGTCTTTTCTTATTTTTCTTTTGGGGCTGAAACCTCTGTTTAAGTGGTGCTTATATTGACAATTAACTATTTAAATATATAATTAGAATAGTAATCGATGATATATTTCGTATTAGGTATCTCACTGGTTGAAAAATAGTCGATGAATTAAAGGAAAACTACACAACTTCAAAATTAGAGAATGACCAAGATACACAAAAAGAAACTCTGTTATGTGAAAATTTATTATGATTACAAAAAAAAAAAATTTCACTAGGATTCCAATTAGAAGACATTGTTCTCCCAAAGATCAAGTTTCTATTTGAGATGATTTAGAACCAAAATCATAGTTTCTTTTTGTAATACTTGGTGAGCATCACATCCTTGTACTTATAAAATTATTAAAATATTCTAAAAAAGAAACTAGAAGAATTTGCTACATGTCAAATTATGATAGGATAATTTGATGGGATATACAAAGATAGGTGATAGGTGATGCATCCACCTAAGTATTTTTTTTAATTTTCTCTTCCCATACACCATTTAGTTTCCAACAATGAATAATATATATTATCTATTCCAACCTACAATTCCCATGTGAATAGCATCCAAAAACAAACACATCTCTCTCTTCATTCAACACCCACAGACCACTTGCACTTACCCATAACATTTCTTTATTTTAATTCCTTTAAAATTTATTATTATTGATTATAAACATATAGTTTTTAATGCATTTTAATTAATTAGTTTAAAATATAGAAAAAAAAGTATTATATTAATTATAATATGTATGATTCTTATTTCAATTTTCGATAAACTATAGTAAAAAACACTAACAAAGTTTTTACTTTCATTTTAAAATACTCTTTATATAAACGATATAAAAAAATATCGCTATAATTTGATTTCATTTCTAAAAAATTTTCATAAAAATAAAAGGAACCTAATTAGAATGAGTTGACTATCTTTACATTATTTTTTAAACTTAGAATATTAAATAAAAAAAAATCCAAACAAATTGAAAAATAAAATAATAAAAATGAAGATGCAAGAGGGCCACAATTATATTCCAATTGTAAGATGCAATTTAGAGCTGTGTGTTCCCAATCTCAACTTCAAGACAACTCAAAGCTTCTTTCAGTTGACTTTTGTTGCATCCGGCAGCCATGGCCGACGAGCTTCGAGCTCAACACGAAAATTGGATGTACGACGTTTTCTTAAGTTTTAGAGGCGAAGATACTCGCAAAAATTTCACAGATCATCTCTACTATTCATTGAAAGATGCAGGCATCAACGTCTTTCGAGACGATCCAGAGCTCGATCGAGGGGAAGACATAAGTTCGGAGCTCGAGCGAGCGATCGAAGGATCGAAGGTAGCTGTTATTGTGTTCTCGGAAAAGTACGCGGAGTCGGGATGGTGTTTGGAGGAGTTGGTAAAGATCATGGAGTGTAGAAGAAGTTTAAGGCAATTGGTTTTGCCTATATTTTATAATGTGGATCCTTCTATTGTGAGGAAGCAAAAGGGTGGATTTGAAGAGGCTTTTGTTGAACATGAAGAGCGTTATTTTAGGGATATTGATAGAGTTCTTAGGTGGAGAATGGCTCTCACTGAAGCTGCTAATTTATCTGGTTGGGATTTGAGGAACATTGCAGATGGGTATTTATTTTCTTCCTTTGATCTATTATTTAAGAACTTTCAATTTAGTTGATTATATGTTTTAATATTTTTAGTTTAGTCACTTCTAACTGTTAATAACTGTTAACATTGGTTGATGAACAACTTTCTTAACAAAATACTTTATAAATTACTATATTAGAATAGTAAAGTTTCTAAACTATTTCTCAAAATTTTAAGTCTTGTTTGAATTATAATTATAAACACTATTTTTCCACCATTCTTTGTTTTATATATATATATTTGTTCATCTCTCGTTATTGGTAGTAAGTGTTAAAATTGGCTAATCAGCAACTTTCTTAACGTAATACTTTGCAAATTAGCATAATTTAAGTATAGAAAGATGCCTCCAAGATTAGAGAAATTTCTAATTTATTTTCCAAATTTTAAAGCCTCGTTTCACAACCATTTGGATTTTGATTTTTTTTCTTATCGAAAATTAAGTTATAATTACTATTGTCCATCTCATAGCTGGCCTATAAGTTTTATTTTTATTTTTTATTTTTATTATTCATTTTTTATCAACGTTTTCAAAAATTAAGTTAAGTTTTGAAAACTAAAAATGTATTTTTATTTTTGAAAATTGACTAAGAATTTAAATATGTTTTTTTTAAAGAATATGAAAACCATGACGAGAGAATCAAGAGGACGCAAGCATAACTTTCAAAAACAACAAATTATTAAAACAAAATTGTTTTCAAACACGCCTAAGAAATGTTTAGAAAGTTTGAGTTTTCTTCTCCTTGAAGTCCTTCGTTCTCTTCTAAATTTTCATCAATCATGTAAATTTATTTGAGAAAATGCTTATATATATATATATAGTCTTTGAGTACAACAATTTCGAGAGTGGGGGATTGAACCTCCAATCTATTGGAAAACGGATTGTCTTGTCAATACCACTGAGCCAAACTCGGCTCACTTTGGCAAATGCTTTTATGTATATACAAAAATGAATTTTCTTAAGTTTTGATGACTAACTTTGAATCTTTGTATATGGCAGACATGAGGCAAAATTCATAAGGTTGATTGTTGAAAAGATATCAAAGGAAGTGAACAGCAAATACTTATTCATAGCTCTTTATCCAGTGGGAATTGAGTCTAGAATTCAACTTCTTTTATCACATCTTCATATTGGTTCAAATGATGTTAGGTTTGTAGGGATTTTGGGGATGGGAGGATTGGGCAAAACCACCATTGCAAAAGCACTTTACAATCAACTTTATCACAACTTTGAAGCCAAATGTTTCCTTTCCAATATCAAACAAACCTCCAACCAACCCAATGCCCTAATTCACTTACAACAACAACTCCTCTCTTCTATCACAAAATCCACCAACATCAATCTCGAAAACGTCGACCGAGGAATCGCCGTGTTGCAAGAAAGACTTCGTCGCAAAAAGCTTCTTTTGATATTAGACGACGTAGACGAAATAAGTCAGTTAAATGCAATAGCAAGAAGTCGTGAATGGTTCGGTTCAGGTAGTAGAATTATCATAACAACTCGAGATCGACATTTACTAAATCAGCTTGAAGTAGACGGACTTTGTTCCATTGATGAAATGAATGACGCTGAAGCGCTCGAACTCTTTAGTTGGCATGCCTTCCGCAATAGTTATCCATCGGAAACTTTTCATCCACTTTCGAAACTCGTTGTCGATTATTGTGGAGGATTGCCATTAGCCCTTGAAGTGTTGGGTTCTTTCCTTTTTGGTAGAAGTAGACAAGAATGGGAAGATACATTGAATAAATTGAAGAAAATTCCAAATGATCAAATTCAAAGAAAGCTTAGAATAAGCTTTGATGGGCTCGATGATCATACTTATAAAGATATATTTCTTGATGTGTCTTGTTTCTTTATTGGAATGAACAGAAATTATGTTGAACAAATCTTAGATGGGTGTGGATTTTTTCCAAGGATTGGAATAAGCGTTCTTCTTCAAAGATGTCTTTTAACAATTGGTGACAAAAACAGATTAATGATGCATGATTTGTTAAGAGATATGGGGAGAGAAATTGTTCATGAAAGTTTCCCAAAATACCCTGAAAAACACACTAGACTTTTTCTTCATGAGGAAGTGCTTTCTCTACTTACAAGACAAAAGGTAAAAAGAAAGTCTTGATTTGATGGAATTTCCTTTTTGTTGTTAAGCACTTCTTTTTATGTTCAATGTTTTGTTTGTTTTTTTGTTTGTTTTTTTTTTTTGTTTTTTTTTTAATTATTTCATTATATTAGGGAACTGATGCAATTGAAGGCCTAAGTTTGAAGTTGCCAAGATTTAGCAAGGAAAAGTTGAGCACAAAAGCATTTAATGAAATGCAAAATTTGAGGTTACTTCAACTTAATTTTGTTAACATAACAGGAGATTTCAAGCATATTTCTCAAGAGATAAGATGGGTTTGTTGGCATGGATTTCCTTTGAAGTTCTTACCTAAAGACTTTCATATGGATAAATTGGTTGCTATGGACTTGAGATATAGCCAAATCAGATTCTTTTGGAAGGAGCCTAAGGTACACATTTTTTTTTTATTTGGAATTCGAATATTTATTTTAGTCTCAATACTATTGATTCCTTCTATTTTAGTCTATGTGCACTTTCAATAAATCTTAACACCCGTCTTTATCATGTCTGTTAAAGTAGTGTTGATATAATTAAATTTACCATAACCCACCAACTTAAGCTTTTCCTAAAATTGGTGATTTAACATGGTATCAGAGCAGAAAAACTTGTATATTCAAACCCTTACAAATGTCATTTCCTTCCCAATTAATATTGATTTCCACTTAATGGGTCTTCAACAAATTTTCAACCCCACAAGTAGAGGTGTTTGTGGATTGGGTTGGGTTGGGTTGAAGGATTTTTTAGACCCAACCCAGTTATTCGGGTTATAAATTTCTTCAACCCAAATAACCCATACTAAAAAATGAACCCCACCCAACCCAATCCAACTATGAAACGTTTGTTGGGTTGGGTTGGTTCGGGTTACTCGGGTCATTTATTTAAATTTGTGTTCTAAAAAAAGTAAAATGTTAATATGTAAAAAAAATTATTTAATTGTTTTCATATATTAAATTAAAATTAACAACTCATTTTCAATTTATATTATGAAAATTTTCTTTCTAAAGTACTAAAAAATTGTTTATAGGAGTTGTTGGAGAAAAAATTAATAAAAAAAACATGAAATTAAATAAAACTAAAATAAATATATGTATCTATAATTTTATCATAAGTAAAAAAGTATATACATTTTAAAATTAATAATAAATTCGGGTTGGTTTGGGTTATTTTAGGTGAACTCATGAACCAACCAAACCCATAACGTTTATGCATTTATTTGAACACATGGGTCATCGGATTTTTTGAATACCCCTACCCACAAATGAAGGGAAATGTTAAAATATTGATATACTTAAATTTACTCTAATCTTTAAACTTTTAGGTCAATATATAAGTGATTTAATTAACAAATACTTTTCATGAAAGCTAATATGCTATCAAATTTGGTAAAACCAATAGAAAAGACGTCATGTGAATATATTTAGAAGATTTATAGTCAAATACATTATCAGATTCATTGAAAGTGCTAAGACTAAAACAGAACGAATATGAATTACATTCCTTTAAAACTTGATATATATCACAATTCTCCCACTAACTTTTTCTTTTTTATCTCTCTCTTTGCTCTCTTTTGTGAACAGTTTCTCAAGAACTTGAAATTTCTTAATCTAAGCCATTCTCATTACTTGACCCACACTCCAAATTTCTCCAAACTCCCAAATCTAGAGAAACTCAAACTCAAAGATTGCAAGAGTTTGGTTGAGTTGCACCCAACCATTGGAGAATTGAAAGCCCTCATTTCTCTAAATTTAAAAGATTGCAAATGCCTCAACTCACTTCCAAAGGGTTTCTCCAACTTAAAATCTTTACAAACTCTCATTCTTTCAGGTTGTTCAAAGCTTAGAACTTTGCCTGAGGATTTAGGAGAAATGAAATCATTAATAACTCTAATAGCTGATAACACACCAATCCAAAAAATTCCTACTACAATTATAAACTTAAAAAATCTCAAATATTTATCTTTATGTGGGTGTAAAGGGCCTCCATCCAAATTATCATTCTTCCCTTCAATGATTTGGTCTTGGATTTCACCAACCAAAAATCCAAACTCAATTGTTCTTCCTTCTTCTTTACAAGGCTTAAACTCCTTAAGAACTCTATGCCTTAAAAACTGCAACTTGTCAAATAACACAATCCCAAAAGATATAGGGAGTTTGGTTTCTTTGAAAGAATTAGATTTGAGAGAGAATTCATTCCATAGTTTACCTTCAAGTATTAGTGGGCTTTTGAAACTTGAAACTCTTTTGTTGGATCATTGCACTGAGCTTCAATTTATACCAAATTTACCACAAAATTTGAATTCATTGTATGCATCAAATTGTACTTCATTGGAAAGGACATCAGATTTGTCAAATGTGAAGCAAATGACAGCTTTGTCTATGAGTAATTGCCCAAAACTTGTGGATGTTCCTGGCTTGGACAAATTGTTGGACTCTATTAGAGTTATTCACATGGAAGGATGTAGCAACATGACCAACTCCTTCAAGGAAACCATTCTACAGGTTCTCATCTCTCTATCTTTATCTCACGGAAATTACACGTCGTGCCATTTAAATGCCGTTTTGATCAACTATTTCCTTTTGCTTTTTTGAATTTTAAAGGGATGGACAGTTAGTGGATTTGGAGGAGTTTGTCTTCCAGGCAAGGAAATTCCAGATTGGTTTGCATACAAGGATGAAGGTCACTCAATATTTTTAGAATTGCCTCAATTTATTGATTGCAATTTAGAAGGCTTCATTTTGTGCATTGTTTACTCTTCTTCTTTTCACAACACAATCTCAACTGACCTTCCAAGTTTATCCGTCATAAATTATACAAAATGTGTCATTACAACCAACAAACCTGTTACCAATGATGTAATAATGTCAACTGAAGATCATTTGTGGCAAGGCCATTTATCAAACAAAACCTTCAAGATGGAAGCTGGCGATGAAGTCGAGATCATCGTTGATTTTGGAGCTGAAATCACCGTGAAGAAGATCGGTATCTCTCTTGTGTTTGACAAGTATGTCGATCGAACTATGTTAGAGTTTGGTTCGACCTCTAATGACGATGATGTTGTCGTCGTGGATAACCGAGACGAAAATGTAATTGAAAATAAAGGAGGAGTTGGGAGTAAGAGAGGTTTTGACAATGATGATGAAGGATTGCGGAATTTATACCAAATGCCTAAAAGGTTGAAAGATGAGATTAACTCTGAGATGAAAATTGATGAGTAG

mRNA sequence

ATGAGCGAGGTATTCGAAGGATACGAGCGTCAATATTGCGAGCTTTCTGCCAATCTTTCCAGAAAGTGCACCTCCGCCAGTGCCCTAGACGGAGAGCAGAAGAAGCAAAAGCTTTCTGAGATAAAAGGTGGTATTGATGAAGCCGAATCTCTGATACGGAAAATGAATCTCGACGCAAGGAGTTTGCAGCCCAGTGTAAAGGCTGTTCTTCTTGCTAAGCTAAGGGAGTATAAATCGGATTTGAGCAATCTCAAAAGTGAAGTAAAACGAATTACGTTGGGCAACTTAAATGCAGCTGCACGCGATGAGCTGCTGGAATCTGGATTGGCTGATACCTTCACTGTCTCAGCTGATCAAAGAACTAGACTAATGACCACAACAGAGAGATTAGGCAATATGAGTGACAGGATTAAGGATAGTCAAAGAACTATGCTCGAAACTGAAGACCTTGGTGTCTCAATCCTAGAAGACTTGCATTCACAGAGACAATCACTTTTGCGTGGCCATGACACGGGATGGACAGTTAGTGGATTTGGAGGAGTTTGTCTTCCAGGCAAGGAAATTCCAGATTGGTTTGCATACAAGGATGAAGGTCACTCAATATTTTTAGAATTGCCTCAATTTATTGATTGCAATTTAGAAGGCTTCATTTTGTGCATTGTTTACTCTTCTTCTTTTCACAACACAATCTCAACTGACCTTCCAAGTTTATCCGTCATAAATTATACAAAATGTGTCATTACAACCAACAAACCTGTTACCAATGATGTAATAATGTCAACTGAAGATCATTTGTGGCAAGGCCATTTATCAAACAAAACCTTCAAGATGGAAGCTGGCGATGAAGTCGAGATCATCGTTGATTTTGGAGCTGAAATCACCGTGAAGAAGATCGGTATCTCTCTTGTGTTTGACAAGTATGTCGATCGAACTATGTTAGAGTTTGGTTCGACCTCTAATGACGATGATGTTGTCGTCGTGGATAACCGAGACGAAAATGTAATTGAAAATAAAGGAGGAGTTGGGAGTAAGAGAGGTTTTGACAATGATGATGAAGGATTGCGGAATTTATACCAAATGCCTAAAAGGTTGAAAGATGAGATTAACTCTGAGATGAAAATTGATGAGTAG

Coding sequence (CDS)

ATGAGCGAGGTATTCGAAGGATACGAGCGTCAATATTGCGAGCTTTCTGCCAATCTTTCCAGAAAGTGCACCTCCGCCAGTGCCCTAGACGGAGAGCAGAAGAAGCAAAAGCTTTCTGAGATAAAAGGTGGTATTGATGAAGCCGAATCTCTGATACGGAAAATGAATCTCGACGCAAGGAGTTTGCAGCCCAGTGTAAAGGCTGTTCTTCTTGCTAAGCTAAGGGAGTATAAATCGGATTTGAGCAATCTCAAAAGTGAAGTAAAACGAATTACGTTGGGCAACTTAAATGCAGCTGCACGCGATGAGCTGCTGGAATCTGGATTGGCTGATACCTTCACTGTCTCAGCTGATCAAAGAACTAGACTAATGACCACAACAGAGAGATTAGGCAATATGAGTGACAGGATTAAGGATAGTCAAAGAACTATGCTCGAAACTGAAGACCTTGGTGTCTCAATCCTAGAAGACTTGCATTCACAGAGACAATCACTTTTGCGTGGCCATGACACGGGATGGACAGTTAGTGGATTTGGAGGAGTTTGTCTTCCAGGCAAGGAAATTCCAGATTGGTTTGCATACAAGGATGAAGGTCACTCAATATTTTTAGAATTGCCTCAATTTATTGATTGCAATTTAGAAGGCTTCATTTTGTGCATTGTTTACTCTTCTTCTTTTCACAACACAATCTCAACTGACCTTCCAAGTTTATCCGTCATAAATTATACAAAATGTGTCATTACAACCAACAAACCTGTTACCAATGATGTAATAATGTCAACTGAAGATCATTTGTGGCAAGGCCATTTATCAAACAAAACCTTCAAGATGGAAGCTGGCGATGAAGTCGAGATCATCGTTGATTTTGGAGCTGAAATCACCGTGAAGAAGATCGGTATCTCTCTTGTGTTTGACAAGTATGTCGATCGAACTATGTTAGAGTTTGGTTCGACCTCTAATGACGATGATGTTGTCGTCGTGGATAACCGAGACGAAAATGTAATTGAAAATAAAGGAGGAGTTGGGAGTAAGAGAGGTTTTGACAATGATGATGAAGGATTGCGGAATTTATACCAAATGCCTAAAAGGTTGAAAGATGAGATTAACTCTGAGATGAAAATTGATGAGTAG

Protein sequence

MSEVFEGYERQYCELSANLSRKCTSASALDGEQKKQKLSEIKGGIDEAESLIRKMNLDARSLQPSVKAVLLAKLREYKSDLSNLKSEVKRITLGNLNAAARDELLESGLADTFTVSADQRTRLMTTTERLGNMSDRIKDSQRTMLETEDLGVSILEDLHSQRQSLLRGHDTGWTVSGFGGVCLPGKEIPDWFAYKDEGHSIFLELPQFIDCNLEGFILCIVYSSSFHNTISTDLPSLSVINYTKCVITTNKPVTNDVIMSTEDHLWQGHLSNKTFKMEAGDEVEIIVDFGAEITVKKIGISLVFDKYVDRTMLEFGSTSNDDDVVVVDNRDENVIENKGGVGSKRGFDNDDEGLRNLYQMPKRLKDEINSEMKIDE

Homology

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BLAST of HG10019731 vs. NCBI nr
Match: XP_038905549.1 (disease resistance protein RPV1-like isoform X1 [Benincasa hispida])

HSP 1 Score: 354.4 bits (908), Expect = 1.2e-93
Identity = 175/200 (87.50%), Postives = 187/200 (93.50%), Query Frame = 0


Query: 173  WTVSGFGGVCLPGKEIPDWFAYKDEGHSIFLELPQFIDCNLEGFILCIVYSSSFHNTIST 232
            WTVSGFGGVCLPGKEIPDWF YKDEGHSIFLELPQF DCNLEGFI+C VYSS F NTIST
Sbjct: 931  WTVSGFGGVCLPGKEIPDWFVYKDEGHSIFLELPQFSDCNLEGFIVCTVYSSCFDNTIST 990

Query: 233  DLPSLSVINYTKCVITTNKPVTNDVIMSTEDHLWQGHLSNKTFKMEAGDEVEIIVDFGAE 292
            DLPSLSVINYTKCV+TTNKP+TNDVIMST+DHLWQGHLSNK FKMEAGDEVEIIVDFGAE
Sbjct: 991  DLPSLSVINYTKCVVTTNKPLTNDVIMSTQDHLWQGHLSNKAFKMEAGDEVEIIVDFGAE 1050

Query: 293  ITVKKIGISLVFDKYVD-RTMLEFGSTSNDDDVVVVDNRDENVIENKGGVGSKRGFDNDD 352
            ITVKKIGISLVF++Y+D RTMLEFGSTSN DD+VVVDN+ +NVIEN+GGVGSKR FDNDD
Sbjct: 1051 ITVKKIGISLVFNEYIDRRTMLEFGSTSN-DDIVVVDNQGKNVIENEGGVGSKRDFDNDD 1110

Query: 353  EGLRNLYQMPKRLKDEINSE 372
            EG RNLYQMPKRLK E NS+
Sbjct: 1111 EGSRNLYQMPKRLKYEDNSD 1129

[Close]

BLAST of HG10019731 vs. NCBI nr
Match: KAE8651209.1 (hypothetical protein Csa_001090 [Cucumis sativus])

HSP 1 Score: 348.6 bits (893), Expect = 6.8e-92
Identity = 175/206 (84.95%), Postives = 188/206 (91.26%), Query Frame = 0


Query: 172  GWTVSGFGGVCLPGKEIPDWFAYKDEGHSIFLELPQFIDCNLEGFILCIVYSSSFHNTIS 231
            GWTVSGFGGVCLPGKE+PDWFAYKDEGHSIFLELPQ+ + NLEGFI+CIVY S F+NT+S
Sbjct: 930  GWTVSGFGGVCLPGKEVPDWFAYKDEGHSIFLELPQYNNSNLEGFIVCIVYCSCFNNTVS 989

Query: 232  TDLPSLSVINYTKCVITTNKPVTNDVIMSTEDHLWQGHLSNKTFKMEAGDEVEIIVDFGA 291
            TDLPSLSVINYTK  ITTNKP+TNDVIMST+DHLWQGHLSNK FKME GDEVEIIVDFGA
Sbjct: 990  TDLPSLSVINYTKSSITTNKPLTNDVIMSTQDHLWQGHLSNKAFKMEPGDEVEIIVDFGA 1049

Query: 292  EITVKKIGISLVFDKYVDRTMLEFGSTSNDDDVVVVDNRDENVIENKGGVGSKRGFD-ND 351
            EITVKKIGISLVFDKYVD+TMLEF STSNDDD VVVDN+DENV E  G VGSKRGFD ND
Sbjct: 1050 EITVKKIGISLVFDKYVDQTMLEFASTSNDDD-VVVDNQDENVSEKDGEVGSKRGFDEND 1109

Query: 352  DEGLRNLYQMPKRLKDEINSEMKIDE 377
            DEGL+N YQ+PKRLK EI+S MKIDE
Sbjct: 1110 DEGLKNSYQIPKRLKCEIDSNMKIDE 1134

[Close]

BLAST of HG10019731 vs. NCBI nr
Match: XP_031737598.1 (TMV resistance protein N [Cucumis sativus])

HSP 1 Score: 348.6 bits (893), Expect = 6.8e-92
Identity = 175/206 (84.95%), Postives = 188/206 (91.26%), Query Frame = 0


Query: 172  GWTVSGFGGVCLPGKEIPDWFAYKDEGHSIFLELPQFIDCNLEGFILCIVYSSSFHNTIS 231
            GWTVSGFGGVCLPGKE+PDWFAYKDEGHSIFLELPQ+ + NLEGFI+CIVY S F+NT+S
Sbjct: 1569 GWTVSGFGGVCLPGKEVPDWFAYKDEGHSIFLELPQYNNSNLEGFIVCIVYCSCFNNTVS 1628

Query: 232  TDLPSLSVINYTKCVITTNKPVTNDVIMSTEDHLWQGHLSNKTFKMEAGDEVEIIVDFGA 291
            TDLPSLSVINYTK  ITTNKP+TNDVIMST+DHLWQGHLSNK FKME GDEVEIIVDFGA
Sbjct: 1629 TDLPSLSVINYTKSSITTNKPLTNDVIMSTQDHLWQGHLSNKAFKMEPGDEVEIIVDFGA 1688

Query: 292  EITVKKIGISLVFDKYVDRTMLEFGSTSNDDDVVVVDNRDENVIENKGGVGSKRGFD-ND 351
            EITVKKIGISLVFDKYVD+TMLEF STSNDDD VVVDN+DENV E  G VGSKRGFD ND
Sbjct: 1689 EITVKKIGISLVFDKYVDQTMLEFASTSNDDD-VVVDNQDENVSEKDGEVGSKRGFDEND 1748

Query: 352  DEGLRNLYQMPKRLKDEINSEMKIDE 377
            DEGL+N YQ+PKRLK EI+S MKIDE
Sbjct: 1749 DEGLKNSYQIPKRLKCEIDSNMKIDE 1773

[Close]

BLAST of HG10019731 vs. NCBI nr
Match: XP_008443388.1 (PREDICTED: TMV resistance protein N [Cucumis melo] >KAA0053781.1 TMV resistance protein N [Cucumis melo var. makuwa] >TYK25623.1 TMV resistance protein N [Cucumis melo var. makuwa])

HSP 1 Score: 343.6 bits (880), Expect = 2.2e-90
Identity = 172/206 (83.50%), Postives = 188/206 (91.26%), Query Frame = 0


Query: 172  GWTVSGFGGVCLPGKEIPDWFAYKDEGHSIFLELPQFIDCNLEGFILCIVYSSSFHNTIS 231
            GWTVSGFGGVCLPGKE+PDWF YKDEGHS+F ELPQF   NLEGFI+CIVY S F+NTIS
Sbjct: 934  GWTVSGFGGVCLPGKEVPDWFTYKDEGHSLFFELPQFNGSNLEGFIVCIVYCSCFNNTIS 993

Query: 232  TDLPSLSVINYTKCVITTNKPVTNDVIMSTEDHLWQGHLSNKTFKMEAGDEVEIIVDFGA 291
            TDLPSLSVINYTK VITTNKP+TNDVIMST+DHLWQGHLSNK FKME GDEVEIIVDFGA
Sbjct: 994  TDLPSLSVINYTKSVITTNKPLTNDVIMSTQDHLWQGHLSNKAFKMEPGDEVEIIVDFGA 1053

Query: 292  EITVKKIGISLVFDKYVDRTMLEFGSTSNDDDVVVVDNRDENVIENKGGVGSKRGF-DND 351
            EITVKKIGISLVF+KYVD TMLEFGSTSN D+V+VVDN+DENV E+ G VGSKRGF D+D
Sbjct: 1054 EITVKKIGISLVFNKYVDGTMLEFGSTSN-DNVIVVDNQDENVSEDYGEVGSKRGFDDSD 1113

Query: 352  DEGLRNLYQMPKRLKDEINSEMKIDE 377
            DEGL+NLYQMPKRLK EI+S++ IDE
Sbjct: 1114 DEGLKNLYQMPKRLKYEIDSDVNIDE 1138

[Close]

BLAST of HG10019731 vs. NCBI nr
Match: XP_022983687.1 (TMV resistance protein N [Cucurbita maxima])

HSP 1 Score: 339.7 bits (870), Expect = 3.1e-89
Identity = 167/200 (83.50%), Postives = 183/200 (91.50%), Query Frame = 0


Query: 172  GWTVSGFGGVCLPGKEIPDWFAYKDEGHSIFLELPQFIDCNLEGFILCIVYSSSFHNTIS 231
            GWTVSGFGGVC+PGKEIPDWFAYKDEGHS+F +LPQF DCNLEGFI+CIVYSS F N +S
Sbjct: 934  GWTVSGFGGVCVPGKEIPDWFAYKDEGHSVFFDLPQFTDCNLEGFIVCIVYSSCFDNAVS 993

Query: 232  TDLPSLSVINYTKCVITTNKPVTNDVIMSTEDHLWQGHLSNKTFKMEAGDEVEIIVDFGA 291
            +DLPSLSVINYTK VITTNKP+TNDV+MSTEDHLWQGHLSNKTFKMEAGDEVEII++FGA
Sbjct: 994  SDLPSLSVINYTKGVITTNKPLTNDVVMSTEDHLWQGHLSNKTFKMEAGDEVEIIINFGA 1053

Query: 292  EITVKKIGISLVFDKYVDRTMLEFGSTSNDDDVVVVDNRDENVIENKGGVGSKRGFDNDD 351
            EITVKKIGISLVFDKYV R MLEFGSTSNDDD  VV+NRD +VIEN+GGVGSKRG D+DD
Sbjct: 1054 EITVKKIGISLVFDKYVKRKMLEFGSTSNDDD-GVVNNRDGDVIENEGGVGSKRGCDHDD 1113

Query: 352  EGLRNLYQMPKRLKDEINSE 372
            EG  + YQ+PKRLK E NSE
Sbjct: 1114 EGPSDWYQLPKRLKYENNSE 1132

[Close]

BLAST of HG10019731 vs. ExPASy Swiss-Prot
Match: Q9LVP9 (Vesicle transport v-SNARE 13 OS=Arabidopsis thaliana OX=3702 GN=VTI13 PE=2 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 9.6e-65
Identity = 126/171 (73.68%), Postives = 152/171 (88.89%), Query Frame = 0


Query: 1   MSEVFEGYERQYCELSANLSRKCTSASALDGEQKKQKLSEIKGGIDEAESLIRKMNLDAR 60
           MS+ FE YERQYCE+SANLS+KCTSA ALDGEQKKQ LSEIK G++EAE+L++KM+L+AR
Sbjct: 1   MSQGFERYERQYCEISANLSKKCTSAIALDGEQKKQNLSEIKSGVEEAEALVKKMDLEAR 60

Query: 61  SLQPSVKAVLLAKLREYKSDLSNLKSEVKRITLGNLNAAARDELLESGLADTFTVSADQR 120
           +L P+VK+ LL KLREYKSDL+N K+EVKRIT GNLNA ARDELLE+G+ADT T SADQR
Sbjct: 61  NLPPNVKSSLLVKLREYKSDLNNFKTEVKRITSGNLNATARDELLEAGMADTLTASADQR 120

Query: 121 TRLMTTTERLGNMSDRIKDSQRTMLETEDLGVSILEDLHSQRQSLLRGHDT 172
           +RLM +T+ LG  +DRIKDS+RT+LETE+LGVSIL+DLH QRQSLLR H+T
Sbjct: 121 SRLMMSTDHLGRTTDRIKDSRRTILETEELGVSILQDLHGQRQSLLRAHET 171

[Close]

BLAST of HG10019731 vs. ExPASy Swiss-Prot
Match: Q9SEL6 (Vesicle transport v-SNARE 11 OS=Arabidopsis thaliana OX=3702 GN=VTI11 PE=1 SV=2)

HSP 1 Score: 247.3 bits (630), Expect = 2.8e-64
Identity = 125/171 (73.10%), Postives = 153/171 (89.47%), Query Frame = 0


Query: 1   MSEVFEGYERQYCELSANLSRKCTSASALDGEQKKQKLSEIKGGIDEAESLIRKMNLDAR 60
           MS+VF+GYERQYCELSA+LS+KC+SA +LDGEQKKQKLSEIK G++ AE LIRKM+L+AR
Sbjct: 1   MSDVFDGYERQYCELSASLSKKCSSAISLDGEQKKQKLSEIKSGLENAEVLIRKMDLEAR 60

Query: 61  SLQPSVKAVLLAKLREYKSDLSNLKSEVKRITLGNLNAAARDELLESGLADTFTVSADQR 120
           +L P++K+ LL KLRE+KSDL+N K+EVKRIT G LNAAARDELLE+G+ADT T SADQR
Sbjct: 61  TLPPNLKSSLLVKLREFKSDLNNFKTEVKRITSGQLNAAARDELLEAGMADTKTASADQR 120

Query: 121 TRLMTTTERLGNMSDRIKDSQRTMLETEDLGVSILEDLHSQRQSLLRGHDT 172
            RLM +TERLG  +DR+KDS+RTM+ETE++GVSIL+DLH QRQSLLR H+T
Sbjct: 121 ARLMMSTERLGRTTDRVKDSRRTMMETEEIGVSILQDLHGQRQSLLRAHET 171

[Close]

BLAST of HG10019731 vs. ExPASy Swiss-Prot
Match: Q9SEL5 (Vesicle transport v-SNARE 12 OS=Arabidopsis thaliana OX=3702 GN=VTI12 PE=1 SV=3)

HSP 1 Score: 209.5 bits (532), Expect = 6.4e-53
Identity = 110/171 (64.33%), Postives = 139/171 (81.29%), Query Frame = 0


Query: 1   MSEVFEGYERQYCELSANLSRKCTSASAL-DGEQKKQKLSEIKGGIDEAESLIRKMNLDA 60
           MS+VFEGYERQYCELS NLSRKC SAS L +GE+KK K++EIK GIDEA+ LIRKM+L+A
Sbjct: 1   MSDVFEGYERQYCELSTNLSRKCHSASVLSNGEEKKGKIAEIKSGIDEADVLIRKMDLEA 60

Query: 61  RSLQPSVKAVLLAKLREYKSDLSNLKSEVKRITLGNLNAAARDELLESGLADTFTVSADQ 120
           RSLQPS KAV L+KLREYKSDL+ LK E KR++  +   ++R+EL+ESG+AD   VSADQ
Sbjct: 61  RSLQPSAKAVCLSKLREYKSDLNQLKKEFKRVSSADAKPSSREELMESGMADLHAVSADQ 120

Query: 121 RTRLMTTTERLGNMSDRIKDSQRTMLETEDLGVSILEDLHSQRQSLLRGHD 171
           R RL  + ERL   SDRI++S+R MLETE++G+SI++DL  QRQ+LL  H+
Sbjct: 121 RGRLAMSVERLDQSSDRIRESRRLMLETEEVGISIVQDLSQQRQTLLHAHN 171

[Close]

BLAST of HG10019731 vs. ExPASy Swiss-Prot
Match: O89116 (Vesicle transport through interaction with t-SNAREs homolog 1A OS=Mus musculus OX=10090 GN=Vti1a PE=1 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 2.6e-17
Identity = 52/170 (30.59%), Postives = 92/170 (54.12%), Query Frame = 0


Query: 1   MSEVFEGYERQYCELSANLSRKCTSASALDGEQKKQKLSEIKGGIDEAESLIRKMNLDAR 60
           MS  FEGYE+ +  L+A ++ K      L  ++KKQ ++ ++  ++EA  L+ +M+L+ R
Sbjct: 1   MSSDFEGYEQDFAVLTAEITSKIARVPRLPPDEKKQMVANVEKQLEEARELLEQMDLEVR 60

Query: 61  SLQPSVKAVLLAKLREYKSDLSNLKSEVKRITLGNLNAAARDELLESGLADTFTVSADQR 120
            + P  + +   ++R YK ++  L+++ KR  +     A  DE+    L D    S +QR
Sbjct: 61  EIPPQSRGMYSNRMRSYKQEMGKLETDFKRSRI-----AYSDEVRNELLGDAGNSSENQR 120

Query: 121 TRLMTTTERLGNMSDRIKDSQRTMLETEDLGVSILEDLHSQRQSLLRGHD 171
             L+  TERL   S R++   +  +ETE +G  +LE+L   R+ + R  D
Sbjct: 121 AHLLDNTERLERSSRRLEAGYQIAVETEQIGQEMLENLSHDREKIQRARD 165

[Close]

BLAST of HG10019731 vs. ExPASy Swiss-Prot
Match: Q96AJ9 (Vesicle transport through interaction with t-SNAREs homolog 1A OS=Homo sapiens OX=9606 GN=VTI1A PE=1 SV=2)

HSP 1 Score: 89.7 bits (221), Expect = 7.4e-17
Identity = 51/170 (30.00%), Postives = 93/170 (54.71%), Query Frame = 0


Query: 1   MSEVFEGYERQYCELSANLSRKCTSASALDGEQKKQKLSEIKGGIDEAESLIRKMNLDAR 60
           MS  FEGYE+ +  L+A ++ K      L  ++KKQ ++ ++  ++EA+ L+ +M+L+ R
Sbjct: 1   MSSDFEGYEQDFAVLTAEITSKIARVPRLPPDEKKQMVANVEKQLEEAKELLEQMDLEVR 60

Query: 61  SLQPSVKAVLLAKLREYKSDLSNLKSEVKRITLGNLNAAARDELLESGLADTFTVSADQR 120
            + P  + +   ++R YK ++  L+++ KR  +     A  DE+    L D    S +QR
Sbjct: 61  EIPPQSRGMYSNRMRSYKQEMGKLETDFKRSRI-----AYSDEVRNELLGDDGNSSENQR 120

Query: 121 TRLMTTTERLGNMSDRIKDSQRTMLETEDLGVSILEDLHSQRQSLLRGHD 171
             L+  TERL   S R++   +  +ETE +G  +LE+L   R+ + R  +
Sbjct: 121 AHLLDNTERLERSSRRLEAGYQIAVETEQIGQEMLENLSHDREKIQRARE 165

[Close]

BLAST of HG10019731 vs. ExPASy TrEMBL
Match: A0A0A0LG09 (TIR domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G824920 PE=4 SV=1)

HSP 1 Score: 348.6 bits (893), Expect = 3.3e-92
Identity = 175/206 (84.95%), Postives = 188/206 (91.26%), Query Frame = 0


Query: 172  GWTVSGFGGVCLPGKEIPDWFAYKDEGHSIFLELPQFIDCNLEGFILCIVYSSSFHNTIS 231
            GWTVSGFGGVCLPGKE+PDWFAYKDEGHSIFLELPQ+ + NLEGFI+CIVY S F+NT+S
Sbjct: 930  GWTVSGFGGVCLPGKEVPDWFAYKDEGHSIFLELPQYNNSNLEGFIVCIVYCSCFNNTVS 989

Query: 232  TDLPSLSVINYTKCVITTNKPVTNDVIMSTEDHLWQGHLSNKTFKMEAGDEVEIIVDFGA 291
            TDLPSLSVINYTK  ITTNKP+TNDVIMST+DHLWQGHLSNK FKME GDEVEIIVDFGA
Sbjct: 990  TDLPSLSVINYTKSSITTNKPLTNDVIMSTQDHLWQGHLSNKAFKMEPGDEVEIIVDFGA 1049

Query: 292  EITVKKIGISLVFDKYVDRTMLEFGSTSNDDDVVVVDNRDENVIENKGGVGSKRGFD-ND 351
            EITVKKIGISLVFDKYVD+TMLEF STSNDDD VVVDN+DENV E  G VGSKRGFD ND
Sbjct: 1050 EITVKKIGISLVFDKYVDQTMLEFASTSNDDD-VVVDNQDENVSEKDGEVGSKRGFDEND 1109

Query: 352  DEGLRNLYQMPKRLKDEINSEMKIDE 377
            DEGL+N YQ+PKRLK EI+S MKIDE
Sbjct: 1110 DEGLKNSYQIPKRLKCEIDSNMKIDE 1134

[Close]

BLAST of HG10019731 vs. ExPASy TrEMBL
Match: A0A5A7UJV4 (TMV resistance protein N OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G007830 PE=4 SV=1)

HSP 1 Score: 343.6 bits (880), Expect = 1.1e-90
Identity = 172/206 (83.50%), Postives = 188/206 (91.26%), Query Frame = 0


Query: 172  GWTVSGFGGVCLPGKEIPDWFAYKDEGHSIFLELPQFIDCNLEGFILCIVYSSSFHNTIS 231
            GWTVSGFGGVCLPGKE+PDWF YKDEGHS+F ELPQF   NLEGFI+CIVY S F+NTIS
Sbjct: 934  GWTVSGFGGVCLPGKEVPDWFTYKDEGHSLFFELPQFNGSNLEGFIVCIVYCSCFNNTIS 993

Query: 232  TDLPSLSVINYTKCVITTNKPVTNDVIMSTEDHLWQGHLSNKTFKMEAGDEVEIIVDFGA 291
            TDLPSLSVINYTK VITTNKP+TNDVIMST+DHLWQGHLSNK FKME GDEVEIIVDFGA
Sbjct: 994  TDLPSLSVINYTKSVITTNKPLTNDVIMSTQDHLWQGHLSNKAFKMEPGDEVEIIVDFGA 1053

Query: 292  EITVKKIGISLVFDKYVDRTMLEFGSTSNDDDVVVVDNRDENVIENKGGVGSKRGF-DND 351
            EITVKKIGISLVF+KYVD TMLEFGSTSN D+V+VVDN+DENV E+ G VGSKRGF D+D
Sbjct: 1054 EITVKKIGISLVFNKYVDGTMLEFGSTSN-DNVIVVDNQDENVSEDYGEVGSKRGFDDSD 1113

Query: 352  DEGLRNLYQMPKRLKDEINSEMKIDE 377
            DEGL+NLYQMPKRLK EI+S++ IDE
Sbjct: 1114 DEGLKNLYQMPKRLKYEIDSDVNIDE 1138

[Close]

BLAST of HG10019731 vs. ExPASy TrEMBL
Match: A0A1S3B7V8 (TMV resistance protein N OS=Cucumis melo OX=3656 GN=LOC103486984 PE=4 SV=1)

HSP 1 Score: 343.6 bits (880), Expect = 1.1e-90
Identity = 172/206 (83.50%), Postives = 188/206 (91.26%), Query Frame = 0


Query: 172  GWTVSGFGGVCLPGKEIPDWFAYKDEGHSIFLELPQFIDCNLEGFILCIVYSSSFHNTIS 231
            GWTVSGFGGVCLPGKE+PDWF YKDEGHS+F ELPQF   NLEGFI+CIVY S F+NTIS
Sbjct: 934  GWTVSGFGGVCLPGKEVPDWFTYKDEGHSLFFELPQFNGSNLEGFIVCIVYCSCFNNTIS 993

Query: 232  TDLPSLSVINYTKCVITTNKPVTNDVIMSTEDHLWQGHLSNKTFKMEAGDEVEIIVDFGA 291
            TDLPSLSVINYTK VITTNKP+TNDVIMST+DHLWQGHLSNK FKME GDEVEIIVDFGA
Sbjct: 994  TDLPSLSVINYTKSVITTNKPLTNDVIMSTQDHLWQGHLSNKAFKMEPGDEVEIIVDFGA 1053

Query: 292  EITVKKIGISLVFDKYVDRTMLEFGSTSNDDDVVVVDNRDENVIENKGGVGSKRGF-DND 351
            EITVKKIGISLVF+KYVD TMLEFGSTSN D+V+VVDN+DENV E+ G VGSKRGF D+D
Sbjct: 1054 EITVKKIGISLVFNKYVDGTMLEFGSTSN-DNVIVVDNQDENVSEDYGEVGSKRGFDDSD 1113

Query: 352  DEGLRNLYQMPKRLKDEINSEMKIDE 377
            DEGL+NLYQMPKRLK EI+S++ IDE
Sbjct: 1114 DEGLKNLYQMPKRLKYEIDSDVNIDE 1138

[Close]

BLAST of HG10019731 vs. ExPASy TrEMBL
Match: A0A6J1J021 (TMV resistance protein N OS=Cucurbita maxima OX=3661 GN=LOC111482231 PE=4 SV=1)

HSP 1 Score: 339.7 bits (870), Expect = 1.5e-89
Identity = 167/200 (83.50%), Postives = 183/200 (91.50%), Query Frame = 0


Query: 172  GWTVSGFGGVCLPGKEIPDWFAYKDEGHSIFLELPQFIDCNLEGFILCIVYSSSFHNTIS 231
            GWTVSGFGGVC+PGKEIPDWFAYKDEGHS+F +LPQF DCNLEGFI+CIVYSS F N +S
Sbjct: 934  GWTVSGFGGVCVPGKEIPDWFAYKDEGHSVFFDLPQFTDCNLEGFIVCIVYSSCFDNAVS 993

Query: 232  TDLPSLSVINYTKCVITTNKPVTNDVIMSTEDHLWQGHLSNKTFKMEAGDEVEIIVDFGA 291
            +DLPSLSVINYTK VITTNKP+TNDV+MSTEDHLWQGHLSNKTFKMEAGDEVEII++FGA
Sbjct: 994  SDLPSLSVINYTKGVITTNKPLTNDVVMSTEDHLWQGHLSNKTFKMEAGDEVEIIINFGA 1053

Query: 292  EITVKKIGISLVFDKYVDRTMLEFGSTSNDDDVVVVDNRDENVIENKGGVGSKRGFDNDD 351
            EITVKKIGISLVFDKYV R MLEFGSTSNDDD  VV+NRD +VIEN+GGVGSKRG D+DD
Sbjct: 1054 EITVKKIGISLVFDKYVKRKMLEFGSTSNDDD-GVVNNRDGDVIENEGGVGSKRGCDHDD 1113

Query: 352  EGLRNLYQMPKRLKDEINSE 372
            EG  + YQ+PKRLK E NSE
Sbjct: 1114 EGPSDWYQLPKRLKYENNSE 1132

[Close]

BLAST of HG10019731 vs. ExPASy TrEMBL
Match: A0A6J1F3C0 (TMV resistance protein N OS=Cucurbita moschata OX=3662 GN=LOC111441805 PE=4 SV=1)

HSP 1 Score: 331.3 bits (848), Expect = 5.4e-87
Identity = 164/201 (81.59%), Postives = 182/201 (90.55%), Query Frame = 0


Query: 172  GWTVSGFGGVCLPGKEIPDWFAYKDEGHSIFLELPQFIDCNLEGFILCIVYSSSFHNTIS 231
            GWTVSGFGGVC+PGKEIPDWFAYKDEGHS+F +LPQF DCNLEGFI+CIVYSS F N +S
Sbjct: 934  GWTVSGFGGVCVPGKEIPDWFAYKDEGHSVFFDLPQFTDCNLEGFIVCIVYSSCFDNAVS 993

Query: 232  TDLPSLSVINYTKCVITTNKPVTNDVIMSTEDHLWQGHLSNKTFKMEAGDEVEIIVDFGA 291
            +DL SLSVINYTK VITTNKP+TNDV+MSTEDHLWQGHLSNKTFKME+ DEVEIIVDFGA
Sbjct: 994  SDLSSLSVINYTKGVITTNKPLTNDVVMSTEDHLWQGHLSNKTFKMESSDEVEIIVDFGA 1053

Query: 292  EITVKKIGISLVFDKYVDRTMLEFGSTSNDDDVVVVDNRDENVIENKGGVGSKRGFD-ND 351
            EITVKKIGISLVFDKYV+R MLEFGSTSN DDV +V+NRD +VIEN+GGVGSKRG D +D
Sbjct: 1054 EITVKKIGISLVFDKYVERKMLEFGSTSN-DDVAIVNNRDGDVIENEGGVGSKRGCDHDD 1113

Query: 352  DEGLRNLYQMPKRLKDEINSE 372
            DEG  + YQ+PKRLK E NS+
Sbjct: 1114 DEGPSDSYQLPKRLKYENNSD 1133

[Close]

BLAST of HG10019731 vs. TAIR 10
Match: AT5G39510.1 (Vesicle transport v-SNARE family protein )

HSP 1 Score: 247.3 bits (630), Expect = 2.0e-65
Identity = 125/171 (73.10%), Postives = 153/171 (89.47%), Query Frame = 0


Query: 1   MSEVFEGYERQYCELSANLSRKCTSASALDGEQKKQKLSEIKGGIDEAESLIRKMNLDAR 60
           MS+VF+GYERQYCELSA+LS+KC+SA +LDGEQKKQKLSEIK G++ AE LIRKM+L+AR
Sbjct: 1   MSDVFDGYERQYCELSASLSKKCSSAISLDGEQKKQKLSEIKSGLENAEVLIRKMDLEAR 60

Query: 61  SLQPSVKAVLLAKLREYKSDLSNLKSEVKRITLGNLNAAARDELLESGLADTFTVSADQR 120
           +L P++K+ LL KLRE+KSDL+N K+EVKRIT G LNAAARDELLE+G+ADT T SADQR
Sbjct: 61  TLPPNLKSSLLVKLREFKSDLNNFKTEVKRITSGQLNAAARDELLEAGMADTKTASADQR 120

Query: 121 TRLMTTTERLGNMSDRIKDSQRTMLETEDLGVSILEDLHSQRQSLLRGHDT 172
            RLM +TERLG  +DR+KDS+RTM+ETE++GVSIL+DLH QRQSLLR H+T
Sbjct: 121 ARLMMSTERLGRTTDRVKDSRRTMMETEEIGVSILQDLHGQRQSLLRAHET 171

[Close]

BLAST of HG10019731 vs. TAIR 10
Match: AT1G26670.1 (Vesicle transport v-SNARE family protein )

HSP 1 Score: 209.5 bits (532), Expect = 4.6e-54
Identity = 110/171 (64.33%), Postives = 139/171 (81.29%), Query Frame = 0


Query: 1   MSEVFEGYERQYCELSANLSRKCTSASAL-DGEQKKQKLSEIKGGIDEAESLIRKMNLDA 60
           MS+VFEGYERQYCELS NLSRKC SAS L +GE+KK K++EIK GIDEA+ LIRKM+L+A
Sbjct: 1   MSDVFEGYERQYCELSTNLSRKCHSASVLSNGEEKKGKIAEIKSGIDEADVLIRKMDLEA 60

Query: 61  RSLQPSVKAVLLAKLREYKSDLSNLKSEVKRITLGNLNAAARDELLESGLADTFTVSADQ 120
           RSLQPS KAV L+KLREYKSDL+ LK E KR++  +   ++R+EL+ESG+AD   VSADQ
Sbjct: 61  RSLQPSAKAVCLSKLREYKSDLNQLKKEFKRVSSADAKPSSREELMESGMADLHAVSADQ 120

Query: 121 RTRLMTTTERLGNMSDRIKDSQRTMLETEDLGVSILEDLHSQRQSLLRGHD 171
           R RL  + ERL   SDRI++S+R MLETE++G+SI++DL  QRQ+LL  H+
Sbjct: 121 RGRLAMSVERLDQSSDRIRESRRLMLETEEVGISIVQDLSQQRQTLLHAHN 171

[Close]

BLAST of HG10019731 vs. TAIR 10
Match: AT3G29100.1 (vesicle transport V-snare 13 )

HSP 1 Score: 170.6 bits (431), Expect = 2.4e-42
Identity = 86/120 (71.67%), Postives = 106/120 (88.33%), Query Frame = 0


Query: 52  IRKMNLDARSLQPSVKAVLLAKLREYKSDLSNLKSEVKRITLGNLNAAARDELLESGLAD 111
           ++KM+L+AR+L P+VK+ LL KLREYKSDL+N K+EVKRIT GNLNA ARDELLE+G+AD
Sbjct: 26  VKKMDLEARNLPPNVKSSLLVKLREYKSDLNNFKTEVKRITSGNLNATARDELLEAGMAD 85

Query: 112 TFTVSADQRTRLMTTTERLGNMSDRIKDSQRTMLETEDLGVSILEDLHSQRQSLLRGHDT 171
           T T SADQR+RLM +T+ LG  +DRIKDS+RT+LETE+LGVSIL+DLH QRQSLLR H+T
Sbjct: 86  TLTASADQRSRLMMSTDHLGRTTDRIKDSRRTILETEELGVSILQDLHGQRQSLLRAHET 145

[Close]

BLAST of HG10019731 vs. TAIR 10
Match: AT3G29100.2 (vesicle transport V-snare 13 )

HSP 1 Score: 167.2 bits (422), Expect = 2.6e-41
Identity = 85/117 (72.65%), Postives = 103/117 (88.03%), Query Frame = 0


Query: 55  MNLDARSLQPSVKAVLLAKLREYKSDLSNLKSEVKRITLGNLNAAARDELLESGLADTFT 114
           M+L+AR+L P+VK+ LL KLREYKSDL+N K+EVKRIT GNLNA ARDELLE+G+ADT T
Sbjct: 1   MDLEARNLPPNVKSSLLVKLREYKSDLNNFKTEVKRITSGNLNATARDELLEAGMADTLT 60

Query: 115 VSADQRTRLMTTTERLGNMSDRIKDSQRTMLETEDLGVSILEDLHSQRQSLLRGHDT 172
            SADQR+RLM +T+ LG  +DRIKDS+RT+LETE+LGVSIL+DLH QRQSLLR H+T
Sbjct: 61  ASADQRSRLMMSTDHLGRTTDRIKDSRRTILETEELGVSILQDLHGQRQSLLRAHET 117

[Close]

BLAST of HG10019731 vs. TAIR 10
Match: AT5G39630.1 (Vesicle transport v-SNARE family protein )

HSP 1 Score: 149.8 bits (377), Expect = 4.3e-36
Identity = 85/165 (51.52%), Postives = 117/165 (70.91%), Query Frame = 0


Query: 1   MSEVFEGYERQYCELSANLSRKCTSASALDGEQKKQKLSEIKGGIDEAESLIRKMNLDAR 60
           MS VF  Y++QY ELS NLS+KC+ A +L G +KK+KLSEI   ++ AE LI KM+  A 
Sbjct: 1   MSNVFHEYDQQYSELSINLSKKCSLAFSLKGGEKKEKLSEITYDLENAEKLISKMDHAAS 60

Query: 61  SLQPSVKAVLLAKLREYKSDLSNLKSEVKRITLGNLNAAARDELLESGLADTFTVSADQR 120
           +L P++K++LL KL+E KS L  L++E+KR T  NL    R+E+LE+  AD     ADQR
Sbjct: 61  NLPPNIKSILLEKLKESKSSLKRLRNEIKRNTSENLKVTTREEVLEAEKADL----ADQR 120

Query: 121 TRLMTTTERLGNMSDRIKDSQRTMLETEDLGVSILEDLHSQRQSL 166
           +RLM +TE L    + IKDSQR +LETE++G+SILE+L  Q++SL
Sbjct: 121 SRLMKSTEGLVRTREMIKDSQRKLLETENIGISILENLQRQKESL 161

The following BLAST results are available for this feature:

BLAST of HG10019731 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038905549.1	1.2e-93	87.50	disease resistance protein RPV1-like isoform X1 [Benincasa hispida]	[more]
KAE8651209.1	6.8e-92	84.95	hypothetical protein Csa_001090 [Cucumis sativus]	[more]
XP_031737598.1	6.8e-92	84.95	TMV resistance protein N [Cucumis sativus]	[more]
XP_008443388.1	2.2e-90	83.50	PREDICTED: TMV resistance protein N [Cucumis melo] >KAA0053781.1 TMV resistance ...	[more]
XP_022983687.1	3.1e-89	83.50	TMV resistance protein N [Cucurbita maxima]	[more]

BLAST of HG10019731 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LVP9	9.6e-65	73.68	Vesicle transport v-SNARE 13 OS=Arabidopsis thaliana OX=3702 GN=VTI13 PE=2 SV=1	[more]
Q9SEL6	2.8e-64	73.10	Vesicle transport v-SNARE 11 OS=Arabidopsis thaliana OX=3702 GN=VTI11 PE=1 SV=2	[more]
Q9SEL5	6.4e-53	64.33	Vesicle transport v-SNARE 12 OS=Arabidopsis thaliana OX=3702 GN=VTI12 PE=1 SV=3	[more]
O89116	2.6e-17	30.59	Vesicle transport through interaction with t-SNAREs homolog 1A OS=Mus musculus O...	[more]
Q96AJ9	7.4e-17	30.00	Vesicle transport through interaction with t-SNAREs homolog 1A OS=Homo sapiens O...	[more]

BLAST of HG10019731 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LG09	3.3e-92	84.95	TIR domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G824920 PE=4 SV...	[more]
A0A5A7UJV4	1.1e-90	83.50	TMV resistance protein N OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A1S3B7V8	1.1e-90	83.50	TMV resistance protein N OS=Cucumis melo OX=3656 GN=LOC103486984 PE=4 SV=1	[more]
A0A6J1J021	1.5e-89	83.50	TMV resistance protein N OS=Cucurbita maxima OX=3661 GN=LOC111482231 PE=4 SV=1	[more]
A0A6J1F3C0	5.4e-87	81.59	TMV resistance protein N OS=Cucurbita moschata OX=3662 GN=LOC111441805 PE=4 SV=1	[more]

BLAST of HG10019731 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G39510.1	2.0e-65	73.10	Vesicle transport v-SNARE family protein	[more]
AT1G26670.1	4.6e-54	64.33	Vesicle transport v-SNARE family protein	[more]
AT3G29100.1	2.4e-42	71.67	vesicle transport V-snare 13	[more]
AT3G29100.2	2.6e-41	72.65	vesicle transport V-snare 13	[more]
AT5G39630.1	4.3e-36	51.52	Vesicle transport v-SNARE family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 67..87
None	No IPR available	GENE3D	1.20.5.110		coord: 117..174 e-value: 1.8E-13 score: 52.5
None	No IPR available	PFAM	PF12352	V-SNARE_C	coord: 128..169 e-value: 3.0E-11 score: 43.5
None	No IPR available	PANTHER	PTHR21230:SF67	VESICLE TRANSPORT V-SNARE 13-LIKE	coord: 1..174
None	No IPR available	PANTHER	PTHR21230	VESICLE TRANSPORT V-SNARE PROTEIN VTI1-RELATED	coord: 1..174
None	No IPR available	CDD	cd15862	SNARE_Vti1	coord: 127..171 e-value: 1.3863E-15 score: 68.7096
None	No IPR available	SUPERFAMILY	58038	SNARE fusion complex	coord: 131..173
IPR007705	Vesicle transport v-SNARE, N-terminal	PFAM	PF05008	V-SNARE	coord: 12..90 e-value: 4.9E-23 score: 81.3
IPR038407	Vesicle transport v-SNARE, N-terminal domain superfamily	GENE3D	1.20.58.400		coord: 1..96 e-value: 8.5E-32 score: 111.3
IPR010989	SNARE	SUPERFAMILY	47661	t-snare proteins	coord: 6..92

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10019731.1	HG10019731.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006952	defense response
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0007165	signal transduction
biological_process	GO:0006906	vesicle fusion
biological_process	GO:0016192	vesicle-mediated transport
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0012507	ER to Golgi transport vesicle membrane
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0031902	late endosome membrane
cellular_component	GO:0031201	SNARE complex
cellular_component	GO:0016020	membrane
molecular_function	GO:0043531	ADP binding
molecular_function	GO:0003953	NAD+ nucleosidase activity
molecular_function	GO:0005484	SNAP receptor activity
molecular_function	GO:0000149	SNARE binding