HG10019714 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10019714
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	ribonuclease MC-like
Location	Chr04: 24788838 .. 24790492 (-)
RNA-Seq Expression	HG10019714
Synteny	HG10019714

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGAAGAAAGAAATTGTGTTGATTTTGAGTATGTTGGTGATGATAGTAAGTTGTTGTGAGGGGGTCAATGAGTTTGACTATTTGCAAGTTGTAATTCAATGGCAGCCTGCCACATGTAGTGATTGGACTAAGCCTAATCCTTATTGTTTTCGAAACCCAGATAATAGATTCAGTATCCATGGCGTGTGGCCTAGCCTATATAACGGCGGCCAAACCTATTGCTCTGGTAGTCCATTCGATGTAAACCAGGTAAAATTTACATACTTTTTGAACTAATGTTCTCAATCATTACTCAAAGTGTCGCTAATCACAAGTTAGAACTATTATTAAATTAATGTTTTGTTAACATATATACATGTATTGATATGCGACTCAAATGATATTTTATATGTGACACCTAAGCTATCTATCGTCAAAAACTCAATTTGCCCATCAACAAAAATTCTTATTCTTTCTAAGTGACATAGTAATTTTAAGATTGTATTTGAAAAAAAAAAGAGTAGACTTCATCATTTGTATTTGTATGAGATATTCGAGTTAGTCCTCTCATTATTGATTGCTTTTGAGATAGAACCTCATTTTTATCTAATATGATATTACAATCCATGAAGTCCGAACAAGCATTCGGTTAAAAAAAAATCAAATTCCATGAATGACAAACCTAATTAAAGAGATTATCTTGAGGGAGCATATCGAAGATCTCACATATTGAAACAATGAAGATATACTTCACAATCTTTATAAGATACATAAGTTACTTTTCTCATTGTTAATTGGTCTTGAACTATAAGATACATGTGCTACTTCTAACCTAGCTAATTGATTTTCATATAGAATGGAACCCTATTTTTTTTTATCTAAGATATGAGAATCTATATAAAAACTTTTAACATATAGAAAGGTAAGTTTTTTTTTTTTTTTGGGTTAGAAAAGGGTCGTTATTCCATTAACAAACCAGAATGTGAGAAACATACGACATAGTTAAAAAAAAAAACAGATAAATTCATAGCAATAGATGAAGAGCTGTAATTTGTAAAATGCTTTGATCTGTATGACCAAAGACCAACAAAATTTCTAACACAGCTTCCCAAATCTGCACATTATTACTGTTGGTGTTCTTGAAAATGAGATTATTTCTTTCATTCCAAAGAGACGAAGATATTGGAATATATATAACTAAAAGTTATTTTATATTGATTATACAGATTAGCATACTCCAACCTGGAATTAGTGAAATATGGCCAAATGTTGCGACAGGAGACAATCTATGGCTATGGGGACATGAGTGGGACAAACATGGAACTTGTACTGAGCCAATTTTATTTGACCAAGAACAATATTTCAGTTTTGCAATGGACACATATATTGAAAACAATATGTTGTTTATTCTTGAGAATAGCCAAATTACACCAAATGGACAAGTTTACTATTCAAGGGATCAAGTTTATACAGCAATAAGAGCAAGGACTGGAAAAACACCAGCCGTTCGATGCAACTACAATTATTGGACTGAACTTCAACAATTGCATGAAATAAGTCTTTGTTATAATTGGAATGCTACGGCTTTTGTGGACTGCCCTTTGAATGCCAACAAATGCGACAATAATTTTGTGTGGTATCCATGGAGCTCTGCTAAGGCTTTATCTATTTAA

mRNA sequence

ATGGGGAAGAAAGAAATTGTGTTGATTTTGAGTATGTTGGTGATGATAGTAAGTTGTTGTGAGGGGGTCAATGAGTTTGACTATTTGCAAGTTGTAATTCAATGGCAGCCTGCCACATGTAGTGATTGGACTAAGCCTAATCCTTATTGTTTTCGAAACCCAGATAATAGATTCAGTATCCATGGCGTGTGGCCTAGCCTATATAACGGCGGCCAAACCTATTGCTCTGGTAGTCCATTCGATGTAAACCAGATTAGCATACTCCAACCTGGAATTAGTGAAATATGGCCAAATGTTGCGACAGGAGACAATCTATGGCTATGGGGACATGAGTGGGACAAACATGGAACTTGTACTGAGCCAATTTTATTTGACCAAGAACAATATTTCAGTTTTGCAATGGACACATATATTGAAAACAATATGTTGTTTATTCTTGAGAATAGCCAAATTACACCAAATGGACAAGTTTACTATTCAAGGGATCAAGTTTATACAGCAATAAGAGCAAGGACTGGAAAAACACCAGCCGTTCGATGCAACTACAATTATTGGACTGAACTTCAACAATTGCATGAAATAAGTCTTTGTTATAATTGGAATGCTACGGCTTTTGTGGACTGCCCTTTGAATGCCAACAAATGCGACAATAATTTTGTGTGGTATCCATGGAGCTCTGCTAAGGCTTTATCTATTTAA

Coding sequence (CDS)

ATGGGGAAGAAAGAAATTGTGTTGATTTTGAGTATGTTGGTGATGATAGTAAGTTGTTGTGAGGGGGTCAATGAGTTTGACTATTTGCAAGTTGTAATTCAATGGCAGCCTGCCACATGTAGTGATTGGACTAAGCCTAATCCTTATTGTTTTCGAAACCCAGATAATAGATTCAGTATCCATGGCGTGTGGCCTAGCCTATATAACGGCGGCCAAACCTATTGCTCTGGTAGTCCATTCGATGTAAACCAGATTAGCATACTCCAACCTGGAATTAGTGAAATATGGCCAAATGTTGCGACAGGAGACAATCTATGGCTATGGGGACATGAGTGGGACAAACATGGAACTTGTACTGAGCCAATTTTATTTGACCAAGAACAATATTTCAGTTTTGCAATGGACACATATATTGAAAACAATATGTTGTTTATTCTTGAGAATAGCCAAATTACACCAAATGGACAAGTTTACTATTCAAGGGATCAAGTTTATACAGCAATAAGAGCAAGGACTGGAAAAACACCAGCCGTTCGATGCAACTACAATTATTGGACTGAACTTCAACAATTGCATGAAATAAGTCTTTGTTATAATTGGAATGCTACGGCTTTTGTGGACTGCCCTTTGAATGCCAACAAATGCGACAATAATTTTGTGTGGTATCCATGGAGCTCTGCTAAGGCTTTATCTATTTAA

Protein sequence

MGKKEIVLILSMLVMIVSCCEGVNEFDYLQVVIQWQPATCSDWTKPNPYCFRNPDNRFSIHGVWPSLYNGGQTYCSGSPFDVNQISILQPGISEIWPNVATGDNLWLWGHEWDKHGTCTEPILFDQEQYFSFAMDTYIENNMLFILENSQITPNGQVYYSRDQVYTAIRARTGKTPAVRCNYNYWTELQQLHEISLCYNWNATAFVDCPLNANKCDNNFVWYPWSSAKALSI

Homology

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BLAST of HG10019714 vs. NCBI nr
Match: XP_038903744.1 (ribonuclease MC-like [Benincasa hispida])

HSP 1 Score: 428.3 bits (1100), Expect = 4.1e-116
Identity = 189/232 (81.47%), Postives = 209/232 (90.09%), Query Frame = 0


Query: 1   MGKKEIVLILSMLVMIVSCCEGVNEFDYLQVVIQWQPATCSDWTKPNPYCFRNPDNRFSI 60
           M KKEI LILSMLVMIVSCCEGVN++DYLQVVIQWQPATC+DW KP PYCF++PDNRFSI
Sbjct: 1   MEKKEIGLILSMLVMIVSCCEGVNDYDYLQVVIQWQPATCTDWKKPYPYCFQDPDNRFSI 60

Query: 61  HGVWPSLYNGGQTYCSGSPFDVNQISILQPGISEIWPNVATGDNLWLWGHEWDKHGTCTE 120
           HG+WPSLY+G QT+C GSPFDVNQISILQPGISEIWPNV TG N WLWGHEWDKHGTCTE
Sbjct: 61  HGMWPSLYSGAQTHCFGSPFDVNQISILQPGISEIWPNVVTGKNQWLWGHEWDKHGTCTE 120

Query: 121 PILFDQEQYFSFAMDTYIENNMLFILENSQITPNGQVYYSRDQVYTAIRARTGKTPAVRC 180
            ILFDQE+YFSF MD YIENN+ FIL  SQITPNGQ+ YSR Q+Y AI A+TGKTPAVRC
Sbjct: 121 SILFDQEEYFSFTMDKYIENNLSFILGKSQITPNGQL-YSRAQIYAAISAKTGKTPAVRC 180

Query: 181 NYNYWTELQQLHEISLCYNWNATAFVDCPLNANKCDNNFVWYPWSSAKALSI 233
           NYNYW+ ++QLHEI+LCYNWNATAF DCPLNANKCDN F+WYPWS+ KALS+
Sbjct: 181 NYNYWSGVEQLHEITLCYNWNATAFEDCPLNANKCDNTFMWYPWSTTKALSV 231

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BLAST of HG10019714 vs. NCBI nr
Match: AEM42996.1 (S-RNase [Siraitia grosvenorii])

HSP 1 Score: 392.9 bits (1008), Expect = 1.9e-105
Identity = 177/231 (76.62%), Postives = 202/231 (87.45%), Query Frame = 0


Query: 1   MGKKEIVLILSMLVMIVSCCEGVNEFDYLQVVIQWQPATCSDWTKPNPYCFRNPDNRFSI 60
           M K+EIVL+LSMLV+I S CEG+NEFDYLQVV+QWQPATCS   KP P C++NPDNR+SI
Sbjct: 1   MAKREIVLVLSMLVLIAS-CEGLNEFDYLQVVMQWQPATCSASNKPYPICYQNPDNRYSI 60

Query: 61  HGVWPSLYNGGQTYCSGSPFDVNQISILQPGISEIWPNVATGDNLWLWGHEWDKHGTCTE 120
           HGVWPSLY+G  T CSGSPF+ N ISILQPGISEIWPN+  G+NLWLWGHEWDKHGTCTE
Sbjct: 61  HGVWPSLYSGAATQCSGSPFNANAISILQPGISEIWPNIINGNNLWLWGHEWDKHGTCTE 120

Query: 121 PILFDQEQYFSFAMDTYIENNMLFILENSQITPNGQVYYSRDQVYTAIRARTGKTPAVRC 180
            ILFDQ++YFSFAMDTYI+ N+L +L NSQITPNGQ+ YSRDQVY AIRA+TGKTPAVRC
Sbjct: 121 EILFDQDRYFSFAMDTYIDYNLLVLLGNSQITPNGQI-YSRDQVYAAIRAKTGKTPAVRC 180

Query: 181 NYNYWTELQQLHEISLCYNWNATAFVDCPLNANKCDNNFVWYPWSSAKALS 232
           NYN WT  QQ+HE+SLCYN +A+A VDCPLNANKCDN FVWY WS+ KA+S
Sbjct: 181 NYNRWTGEQQMHEVSLCYNHDASAVVDCPLNANKCDNYFVWYSWSTQKAVS 229

[Close]

BLAST of HG10019714 vs. NCBI nr
Match: XP_022149793.1 (ribonuclease MC-like [Momordica charantia])

HSP 1 Score: 347.1 bits (889), Expect = 1.2e-91
Identity = 156/231 (67.53%), Postives = 187/231 (80.95%), Query Frame = 0


Query: 1   MGKKEIVLILSMLVMIVSCCEGVNEFDYLQVVIQWQPATCSDWTKPNPYCFRNPDNRFSI 60
           M ++EI++++  ++++V+ CEG+NEFDYLQVVIQWQPATCSD+ K  P CF+ P NRFSI
Sbjct: 1   MAQREIIVLVLSMLVLVAICEGLNEFDYLQVVIQWQPATCSDYNK--PACFQAPGNRFSI 60

Query: 61  HGVWPSLYNGGQTYCSGSPFDVNQISILQPGISEIWPNVATGDNLWLWGHEWDKHGTCTE 120
           HGVWPSLY+G  T CSGSPFD NQIS LQPGISEIWPNVATGDN WLW HEWDKHGTC+E
Sbjct: 61  HGVWPSLYDGYPTQCSGSPFDRNQISGLQPGISEIWPNVATGDNFWLWQHEWDKHGTCSE 120

Query: 121 PILFDQEQYFSFAMDTYIENNMLFILENSQITPNGQVYYSRDQVYTAIRARTGKTPAVRC 180
              +DQ++YF F MD YI NN+  IL N+QITPNG+  Y+RDQVY AIRA+TGKTPAVRC
Sbjct: 121 STFYDQQEYFGFGMDAYIHNNLQVILSNNQITPNGRT-YTRDQVYAAIRAKTGKTPAVRC 180

Query: 181 NYNYWTELQQLHEISLCYNWNATAFVDCPLNANKCDNNFVWYPWSSAKALS 232
           NYN  T   QLHEISLC+  +A+ F DCPLNANKC  +FVW  W++ KA+S
Sbjct: 181 NYNSRTGASQLHEISLCFKKDASVFEDCPLNANKCGASFVWNSWNTVKAIS 228

[Close]

BLAST of HG10019714 vs. NCBI nr
Match: XP_022158939.1 (ribonuclease MC-like [Momordica charantia])

HSP 1 Score: 223.4 bits (568), Expect = 2.0e-54
Identity = 111/232 (47.84%), Postives = 147/232 (63.36%), Query Frame = 0


Query: 1   MGKKEIVLILSMLVMIVSCCEGVNEFDYLQVVIQWQPATCSDWTKPNPYCFRNPDNRFSI 60
           MGK+EI+L+LSM  + +S  EGVNEFDY QVV+QWQPATCS  T     C + P++R+S+
Sbjct: 1   MGKREILLVLSMF-LAISSSEGVNEFDYYQVVLQWQPATCSSATL-KTVCVQPPEDRYSV 60

Query: 61  HGVWPSLYNGGQTYCSGS-PFDVNQISILQPGISEIWPNVATGDNLWLWGHEWDKHGTCT 120
           HGVWPSL +G    CSG+ P+D   I  +Q  + + WPNV TG N   W +EW KHGTC+
Sbjct: 61  HGVWPSLSSGYLPTCSGTPPYDARMILTIQARLDQDWPNVITGQNPQFWSYEWTKHGTCS 120

Query: 121 EPILFDQEQYFSFAMDTYIENNMLFILENSQITPNGQVYYSRDQVYTAIRARTGKTPAVR 180
              L +Q  YF+F +  Y   ++  IL    I PNGQ  Y++  V  AI + TGK PA+R
Sbjct: 121 SAYL-NQFHYFNFGLWVYTNYDLQSILYQYGIYPNGQ-QYTKTVVQNAIYSATGKWPALR 180

Query: 181 CNYNYWTELQQLHEISLCYNWNATAFVDCPLNANKCDNNFVWYPWSSAKALS 232
           CN NY T   QLHEISLC++ N    +DCP N   C+  FVW  WS + +++
Sbjct: 181 CNNNYRTGNMQLHEISLCFSKNGQILIDCPFNVVTCNEYFVWNSWSYSASVA 228

[Close]

BLAST of HG10019714 vs. NCBI nr
Match: XP_038904516.1 (ribonuclease MC-like [Benincasa hispida])

HSP 1 Score: 221.5 bits (563), Expect = 7.7e-54
Identity = 109/242 (45.04%), Postives = 138/242 (57.02%), Query Frame = 0


Query: 20  CEGVNEFDYLQVVIQWQPATCSDWTKPNPYCFRNPDNRFSI------------------- 79
           CEGVNE+D+L+VV QWQPATC   TKP PYC++ P NRF +                   
Sbjct: 2   CEGVNEYDFLRVVFQWQPATCGVATKPYPYCYQTPQNRFGLDYTMAKPNVQASSSQVNLL 61

Query: 80  -----HGVWPS-------------LYNGGQTYCSGSPFDVNQISILQPGISEIWPNVATG 139
                H V  S             L+ G + Y         ++ +L+P ++E+W NV TG
Sbjct: 62  FYPKAHFVQTSKQLTRARAHITLVLFKGRENY---------KVKVLEPRLNEMWGNVITG 121

Query: 140 DNLWLWGHEWDKHGTCTEPILFDQEQYFSFAMDTYIENNMLFILENSQITPNGQVYYSRD 199
           DN WLW  EWDKHGTC E ILFDQ  YF + M+T    N   IL+N  I P  + YY+ D
Sbjct: 122 DNQWLWKPEWDKHGTCIEDILFDQSGYFEYTMNTLYYFNPEEILKNGGIWPTQEGYYTLD 181

Query: 200 QVYTAIRARTGKTPAVRCNYNYWTELQQLHEISLCYNWNATAFVDCPLNANKCD-NNFVW 224
           ++ + I+ARTGK PAV CNYN+WT  QQLHEIS C       FVDCP NANKC+ ++ +W
Sbjct: 182 EIKSVIKARTGKLPAVGCNYNHWTSYQQLHEISYCVTKEGQTFVDCPSNANKCNGHSAMW 234

[Close]

BLAST of HG10019714 vs. ExPASy Swiss-Prot
Match: P23540 (Ribonuclease MC OS=Momordica charantia OX=3673 PE=1 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 1.5e-28
Identity = 68/197 (34.52%), Postives = 103/197 (52.28%), Query Frame = 0


Query: 26  FDYLQVVIQWQPATCSDWTKPNPYCFRNPDNRFSIHGVWPSLYNGGQTYC-SGSPFDVNQ 85
           FD    V QW PA CS   + +  C  +    F+IHG+WP       T C  GSPFD+ +
Sbjct: 1   FDSFWFVQQWPPAVCS--FQKSGSCPGSGLRTFTIHGLWPQGSGTSLTNCPQGSPFDITK 60

Query: 86  ISILQPGISEIWPNVATGDNLWLWGHEWDKHGTCTEPILFDQEQYFSFAMDTYIENNMLF 145
           IS LQ  ++ +WPNV   +N   W HEW KHGTC+E   F+Q  YF  A+D     +++ 
Sbjct: 61  ISHLQSQLNTLWPNVLRANNQQFWSHEWTKHGTCSES-TFNQAAYFKLAVDMRNNYDIIG 120

Query: 146 ILENSQITPNGQVYYSRDQVYTAIRARTGKTPAVRCNYNYWTELQQLHEISLCYNWNATA 205
            L      PNG+   SR  +   ++A+ GK P +RC  +  T++  L ++  C+  + + 
Sbjct: 121 ALRPHAAGPNGRT-KSRQAIKGFLKAKFGKFPGLRCRTDPQTKVSYLVQVVACFAQDGST 180

Query: 206 FVDCPLNANKCDNNFVW 222
            +DC    + C  NF++
Sbjct: 181 LIDC--TRDTCGANFIF 191

[Close]

BLAST of HG10019714 vs. ExPASy Swiss-Prot
Match: O80324 (Ribonuclease S-6 OS=Pyrus pyrifolia OX=3767 PE=1 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 1.7e-27
Identity = 76/228 (33.33%), Postives = 118/228 (51.75%), Query Frame = 0


Query: 6   IVLILSMLVMIVSCCEGVNEFDYLQVVIQWQPATCSDWTKPNPYCFRNPDNRFSIHGVWP 65
           + ++ S++V+I   C     ++Y Q   Q+QPA C+  + P P C   PD  F++HG+WP
Sbjct: 10  VPMVFSLIVLI--SCSSTMGYNYFQFTQQYQPAVCN--SNPTP-CKDPPDKLFTVHGLWP 69

Query: 66  SLYNGGQ-TYCSGSPFDVNQISILQPGISEIWPNVA-TGDNLWLWGHEWDKHGTCTE-PI 125
           S   G    YC        QI  L   +  IWPNV    D++  W  +W+KHG+C + P 
Sbjct: 70  SNDVGDDPIYCKNKTIKSQQIGNLTAQLIIIWPNVLDRTDHVGFWNRQWNKHGSCGKAPT 129

Query: 126 LFDQEQYFSFAMDTYI--ENNMLFILENSQITPNGQVYYSRDQVYTAIRART-GKTPAVR 185
           + D+  YF   +  YI  + N+  IL  ++I P G++   RD +  AIR  T  K P ++
Sbjct: 130 IKDEMHYFKTVIKMYITQKQNVSEILSRAKIEPEGKI-RRRDDIINAIRLGTKDKKPKLK 189

Query: 186 CNYNYWTELQQLHEISLCYNWNATAFVDCPLNANK-----CDNNFVWY 223
           C  N   +  +L EI++C + N T F+DCP ++ K     C  N + Y
Sbjct: 190 CQKN--NQTTELVEITICSDRNLTQFIDCPRSSFKGSPFHCPTNHILY 229

[Close]

BLAST of HG10019714 vs. ExPASy Swiss-Prot
Match: P80022 (Extracellular ribonuclease LE OS=Solanum lycopersicum OX=4081 PE=1 SV=2)

HSP 1 Score: 123.2 bits (308), Expect = 3.7e-27
Identity = 70/214 (32.71%), Postives = 116/214 (54.21%), Query Frame = 0


Query: 6   IVLILSMLVMIVSCCEGVNEFDYLQVVIQWQPATCSDWTKPNPYCF---RNPDNRFSIHG 65
           + LIL ++   +S      +FD+   V QW  + C   TK +  C+     P   F IHG
Sbjct: 9   LFLILLIITQCLSVLNAAKDFDFFYFVQQWPGSYCD--TKQS-CCYPTTGKPAADFGIHG 68

Query: 66  VWPSLYNGGQTYCS----GSPFDVNQISILQPGISEIWPNVA--TGDNLWLWGHEWDKHG 125
           +WP+  N   TY S     SP+D +QIS L   + + WP +A  +G     W HEW+KHG
Sbjct: 69  LWPN--NNDGTYPSNCDPNSPYDQSQISDLISSMQQNWPTLACPSGSGSTFWSHEWEKHG 128

Query: 126 TCTEPILFDQEQYFSFAMDTYIENNMLFILENSQITPNGQVYYSRDQVYTAIRARTGKTP 185
           TC E +L +Q  YF  A+D   + ++L IL+ + I P+G+  Y    +  AI++  G TP
Sbjct: 129 TCAESVLTNQHAYFKKALDLKNQIDLLSILQGADIHPDGE-SYDLVNIRNAIKSAIGYTP 188

Query: 186 AVRCNYNYWTELQQLHEISLCYNWNATAFVDCPL 211
            ++CN +  +   QL+++ +C + + ++ ++CP+
Sbjct: 189 WIQCNVDQ-SGNSQLYQVYICVDGSGSSLIECPI 215

[Close]

BLAST of HG10019714 vs. ExPASy Swiss-Prot
Match: P80196 (Intracellular ribonuclease LX OS=Solanum lycopersicum OX=4081 GN=RNALX PE=1 SV=2)

HSP 1 Score: 121.3 bits (303), Expect = 1.4e-26
Identity = 75/231 (32.47%), Postives = 119/231 (51.52%), Query Frame = 0


Query: 3   KKEIVLILSMLVMIVSCCEGVNEFDYLQVVIQWQPATCSDWTKPNPY-CFRNPDNRFSIH 62
           KK ++ I+ +  ++V C     +FD+   V QW PA+  D  +   Y     PD  FSIH
Sbjct: 6   KKLLIKIIVVQCLLVLCVTS-QDFDFFYFVQQW-PASYCDTRRSCCYPTTGKPDEDFSIH 65

Query: 63  GVWPSLYNG--GQTYCSGSPFDVNQISILQPGISEIWPNVA--TGDNLWLWGHEWDKHGT 122
           G+WP+  +G   Q     S  D ++ S L   + + WP++A  + D L  W HEW KHGT
Sbjct: 66  GLWPNYKDGKWPQNCDRESSLDESEFSDLISTMEKNWPSLACPSSDGLKFWSHEWLKHGT 125

Query: 123 CTEPILFDQEQYFSFAMDTYIENNMLFILENSQITPNGQVYYSRDQVYTAIRARTGKTPA 182
           C+     +Q  YF  A+D   ++N+L  L N+ I P    YY  + +  AI    G TP 
Sbjct: 126 CS---ALNQHAYFQTALDFKTKSNLLQNLNNAGIKPRNGDYYGVESIKKAIEKGVGHTPF 185

Query: 183 VRCNYNYWTELQQLHEISLCYNWNATAFVDCPL--NANKCDNNFVWYPWSS 227
           + CN +      QL+++ LC + +A+ F+DCP+  +  KC +   +  +S+
Sbjct: 186 IECNVDSQGN-HQLYQVYLCVDSSASKFIDCPIFPHGGKCGSKIEFPSFST 230

[Close]

BLAST of HG10019714 vs. ExPASy Swiss-Prot
Match: P42813 (Ribonuclease 1 OS=Arabidopsis thaliana OX=3702 GN=RNS1 PE=1 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 1.6e-25
Identity = 70/214 (32.71%), Postives = 114/214 (53.27%), Query Frame = 0


Query: 6   IVLILSMLVMIVSCCEGVNEFDYLQVVIQWQPATCSDWTKPNPYCFRN---PDNRFSIHG 65
           ++ +L +L  + S      +FD+   V QW  + C    K    C+ N   P   F IHG
Sbjct: 10  LISLLVILPSVFSASSSSEDFDFFYFVQQWPGSYCDTQKK---CCYPNSGKPAADFGIHG 69

Query: 66  VWPSLYNGGQTY---CSGS-PFDVNQISILQPGISEIWPNVA--TGDNLWLWGHEWDKHG 125
           +WP+  +G  TY   C  S PFD + IS L   + + WP +A  +G     W HEW+KHG
Sbjct: 70  LWPNYKDG--TYPSNCDASKPFDSSTISDLLTSMKKSWPTLACPSGSGEAFWEHEWEKHG 129

Query: 126 TCTEPILFDQEQYFSFAMDTYIENNMLFILENSQITPNGQVYYSRDQVYTAIRARTGKTP 185
           TC+E ++ DQ +YF  A++   + N+L  L  + I P+G+  YS + +  +I+   G TP
Sbjct: 130 TCSESVI-DQHEYFQTALNLKQKTNLLGALTKAGINPDGK-SYSLESIRDSIKESIGFTP 189

Query: 186 AVRCNYNYWTELQQLHEISLCYNWNATAFVDCPL 211
            V CN +  +   QL+++ LC + + +  ++CP+
Sbjct: 190 WVECNRD-GSGNSQLYQVYLCVDRSGSGLIECPV 215

[Close]

BLAST of HG10019714 vs. ExPASy TrEMBL
Match: K7NBR4 (S-RNase OS=Siraitia grosvenorii OX=190515 PE=2 SV=1)

HSP 1 Score: 392.9 bits (1008), Expect = 9.3e-106
Identity = 177/231 (76.62%), Postives = 202/231 (87.45%), Query Frame = 0


Query: 1   MGKKEIVLILSMLVMIVSCCEGVNEFDYLQVVIQWQPATCSDWTKPNPYCFRNPDNRFSI 60
           M K+EIVL+LSMLV+I S CEG+NEFDYLQVV+QWQPATCS   KP P C++NPDNR+SI
Sbjct: 1   MAKREIVLVLSMLVLIAS-CEGLNEFDYLQVVMQWQPATCSASNKPYPICYQNPDNRYSI 60

Query: 61  HGVWPSLYNGGQTYCSGSPFDVNQISILQPGISEIWPNVATGDNLWLWGHEWDKHGTCTE 120
           HGVWPSLY+G  T CSGSPF+ N ISILQPGISEIWPN+  G+NLWLWGHEWDKHGTCTE
Sbjct: 61  HGVWPSLYSGAATQCSGSPFNANAISILQPGISEIWPNIINGNNLWLWGHEWDKHGTCTE 120

Query: 121 PILFDQEQYFSFAMDTYIENNMLFILENSQITPNGQVYYSRDQVYTAIRARTGKTPAVRC 180
            ILFDQ++YFSFAMDTYI+ N+L +L NSQITPNGQ+ YSRDQVY AIRA+TGKTPAVRC
Sbjct: 121 EILFDQDRYFSFAMDTYIDYNLLVLLGNSQITPNGQI-YSRDQVYAAIRAKTGKTPAVRC 180

Query: 181 NYNYWTELQQLHEISLCYNWNATAFVDCPLNANKCDNNFVWYPWSSAKALS 232
           NYN WT  QQ+HE+SLCYN +A+A VDCPLNANKCDN FVWY WS+ KA+S
Sbjct: 181 NYNRWTGEQQMHEVSLCYNHDASAVVDCPLNANKCDNYFVWYSWSTQKAVS 229

[Close]

BLAST of HG10019714 vs. ExPASy TrEMBL
Match: A0A6J1D7Q5 (ribonuclease MC-like OS=Momordica charantia OX=3673 GN=LOC111018138 PE=3 SV=1)

HSP 1 Score: 347.1 bits (889), Expect = 5.9e-92
Identity = 156/231 (67.53%), Postives = 187/231 (80.95%), Query Frame = 0


Query: 1   MGKKEIVLILSMLVMIVSCCEGVNEFDYLQVVIQWQPATCSDWTKPNPYCFRNPDNRFSI 60
           M ++EI++++  ++++V+ CEG+NEFDYLQVVIQWQPATCSD+ K  P CF+ P NRFSI
Sbjct: 1   MAQREIIVLVLSMLVLVAICEGLNEFDYLQVVIQWQPATCSDYNK--PACFQAPGNRFSI 60

Query: 61  HGVWPSLYNGGQTYCSGSPFDVNQISILQPGISEIWPNVATGDNLWLWGHEWDKHGTCTE 120
           HGVWPSLY+G  T CSGSPFD NQIS LQPGISEIWPNVATGDN WLW HEWDKHGTC+E
Sbjct: 61  HGVWPSLYDGYPTQCSGSPFDRNQISGLQPGISEIWPNVATGDNFWLWQHEWDKHGTCSE 120

Query: 121 PILFDQEQYFSFAMDTYIENNMLFILENSQITPNGQVYYSRDQVYTAIRARTGKTPAVRC 180
              +DQ++YF F MD YI NN+  IL N+QITPNG+  Y+RDQVY AIRA+TGKTPAVRC
Sbjct: 121 STFYDQQEYFGFGMDAYIHNNLQVILSNNQITPNGRT-YTRDQVYAAIRAKTGKTPAVRC 180

Query: 181 NYNYWTELQQLHEISLCYNWNATAFVDCPLNANKCDNNFVWYPWSSAKALS 232
           NYN  T   QLHEISLC+  +A+ F DCPLNANKC  +FVW  W++ KA+S
Sbjct: 181 NYNSRTGASQLHEISLCFKKDASVFEDCPLNANKCGASFVWNSWNTVKAIS 228

[Close]

BLAST of HG10019714 vs. ExPASy TrEMBL
Match: A0A6J1E0X1 (ribonuclease MC-like OS=Momordica charantia OX=3673 GN=LOC111025395 PE=3 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 9.8e-55
Identity = 111/232 (47.84%), Postives = 147/232 (63.36%), Query Frame = 0


Query: 1   MGKKEIVLILSMLVMIVSCCEGVNEFDYLQVVIQWQPATCSDWTKPNPYCFRNPDNRFSI 60
           MGK+EI+L+LSM  + +S  EGVNEFDY QVV+QWQPATCS  T     C + P++R+S+
Sbjct: 1   MGKREILLVLSMF-LAISSSEGVNEFDYYQVVLQWQPATCSSATL-KTVCVQPPEDRYSV 60

Query: 61  HGVWPSLYNGGQTYCSGS-PFDVNQISILQPGISEIWPNVATGDNLWLWGHEWDKHGTCT 120
           HGVWPSL +G    CSG+ P+D   I  +Q  + + WPNV TG N   W +EW KHGTC+
Sbjct: 61  HGVWPSLSSGYLPTCSGTPPYDARMILTIQARLDQDWPNVITGQNPQFWSYEWTKHGTCS 120

Query: 121 EPILFDQEQYFSFAMDTYIENNMLFILENSQITPNGQVYYSRDQVYTAIRARTGKTPAVR 180
              L +Q  YF+F +  Y   ++  IL    I PNGQ  Y++  V  AI + TGK PA+R
Sbjct: 121 SAYL-NQFHYFNFGLWVYTNYDLQSILYQYGIYPNGQ-QYTKTVVQNAIYSATGKWPALR 180

Query: 181 CNYNYWTELQQLHEISLCYNWNATAFVDCPLNANKCDNNFVWYPWSSAKALS 232
           CN NY T   QLHEISLC++ N    +DCP N   C+  FVW  WS + +++
Sbjct: 181 CNNNYRTGNMQLHEISLCFSKNGQILIDCPFNVVTCNEYFVWNSWSYSASVA 228

[Close]

BLAST of HG10019714 vs. ExPASy TrEMBL
Match: A0A6J1DQK2 (ribonuclease MC-like OS=Momordica charantia OX=3673 GN=LOC111023418 PE=3 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 1.2e-49
Identity = 110/226 (48.67%), Postives = 142/226 (62.83%), Query Frame = 0


Query: 3   KKEIVLILSMLVMIVSCCEGVNEFDYLQVVIQWQPATCSDWTKPNPYCFRNPDNRFSIHG 62
           + EIVLILSML +++   EGVNEFDY QVV+QWQPATCS  T  +  C + PD RFSIHG
Sbjct: 4   RSEIVLILSML-LLIGWSEGVNEFDYYQVVLQWQPATCSSSTLVDE-CVQPPDERFSIHG 63

Query: 63  VWPSLYNGGQTYCSGS-PFDVNQI-SILQPGISEIWPNVATGDNLWLWGHEWDKHGTCTE 122
           VWPSL + G   CSG+ P+D  Q+ S ++  + + WP+V    +   W HEW  HGTC+ 
Sbjct: 64  VWPSLLS-GDAVCSGTPPYDGTQLNSSIRARLHQDWPSVVHRVDPPFWSHEWTLHGTCSY 123

Query: 123 PILFDQEQYFSFAMDTYIENNMLFILENSQITPNGQVYYSRDQVYTAIRARTGKTPAVRC 182
             L DQ  YF F +  Y   ++L IL    + PNG + Y+R  V   I + TGK PA+RC
Sbjct: 124 AYL-DQFHYFDFGLFVYGNYDVLGILNYYNVYPNGNL-YARSDVENIIYSATGKWPALRC 183

Query: 183 NYNYWTELQQLHEISLCYNWNATAFVDCPLNANKCDNNFVWYPWSS 227
           N N+W+   QLHEISLC+     +  DCP NA KC++ FVW  WSS
Sbjct: 184 NNNFWSGDVQLHEISLCFRKQDFSLEDCPYNAVKCNDYFVWNSWSS 224

[Close]

BLAST of HG10019714 vs. ExPASy TrEMBL
Match: A0A6J1E266 (ribonuclease MC-like OS=Momordica charantia OX=3673 GN=LOC111025771 PE=3 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 1.4e-48
Identity = 101/225 (44.89%), Postives = 136/225 (60.44%), Query Frame = 0


Query: 1   MGKKEIVLILSMLVMIVSCCEGVNEFDYLQVVIQWQPATCSDWTKPNPYCFRNPDNRFSI 60
           M KK IVL+ S LV+I SC     +++Y QV +QWQPATCSD     P C   P +RFSI
Sbjct: 1   MEKKGIVLVFSTLVVIASC-----DYNYYQVTLQWQPATCSDANLQTP-CVNTPQDRFSI 60

Query: 61  HGVWPSLYNGGQTYCSGSP-FDVNQISILQPGISEIWPNVATGDNLWLWGHEWDKHGTCT 120
           HGVWP+L +G    C G+P +D ++IS ++  ++  WP+V  G N  LW HEW  HGTC+
Sbjct: 61  HGVWPTLSSGSYPQCPGTPAYDGSKISTIRNRLNADWPSVIYGTNPTLWSHEWTTHGTCS 120

Query: 121 EPILFDQEQYFSFAMDTYIENNMLFILENSQITPNGQVYYSRDQVYTAIRARTGKTPAVR 180
            P L  Q  YF+F +DTY + ++   L+   I P+  V YS+  +  AIR  T K P +R
Sbjct: 121 YPSL-SQLDYFTFGLDTYAKYDIYSALDKEDIYPSEDV-YSKSSINNAIRKITQKLPGLR 180

Query: 181 CNYNYWTELQQLHEISLCYNWNATAFVDCPLNANKCDNNFVWYPW 225
           CN N ++  +QLHEI LC+  +  A +DCP N   C N   WYPW
Sbjct: 181 CNTNDYSRERQLHEIILCFAKSNRAIIDCPSNVVTCGNYVYWYPW 217

[Close]

BLAST of HG10019714 vs. TAIR 10
Match: AT1G14220.1 (Ribonuclease T2 family protein )

HSP 1 Score: 124.0 bits (310), Expect = 1.6e-28
Identity = 77/218 (35.32%), Postives = 120/218 (55.05%), Query Frame = 0


Query: 1   MGKKEIVLILSMLVMI--VSCCEGVNEFDYLQVVIQWQPATCSDWTKPNPY-CFRNPDNR 60
           MG K  V +L  L++   +       +FD+   V+QW  A C D ++   Y     P   
Sbjct: 1   MGAKGCVNVLLKLLVFQGLFVSRPQEDFDFFYFVLQWPGAYC-DTSRACCYPTSGKPAAD 60

Query: 61  FSIHGVWPSLYNGGQ--TYCS-GSPFDVNQISILQPGISEIWPNVA--TGDNLWLWGHEW 120
           F IHG+WP+ YNGG   + C   S FD +QIS L   + + WP ++  + +    W HEW
Sbjct: 61  FGIHGLWPN-YNGGSWPSNCDPDSQFDRSQISDLVSSLKKNWPTLSCPSNEGFNFWEHEW 120

Query: 121 DKHGTCTEPILFDQEQYFSFAMDTYIENNMLFILENSQITPNGQVYYSRDQVYTAIRART 180
           +KHGTC+E ++ DQ +YF  A+    + N+L IL+NS I P+   +Y+ D++  AI+   
Sbjct: 121 EKHGTCSESVM-DQHEYFENALKLKQKANLLQILKNSGINPD-DGFYNLDKITNAIKDGI 180

Query: 181 GKTPAVRCNYNYWTELQQLHEISLCYNWNATAFVDCPL 211
           G TP + CN +      QLH+I +C + + T F++CP+
Sbjct: 181 GFTPGIECNKDP-ERNAQLHQIYICVDTSGTEFIECPV 213

[Close]

BLAST of HG10019714 vs. TAIR 10
Match: AT2G02990.1 (ribonuclease 1 )

HSP 1 Score: 117.9 bits (294), Expect = 1.1e-26
Identity = 70/214 (32.71%), Postives = 114/214 (53.27%), Query Frame = 0


Query: 6   IVLILSMLVMIVSCCEGVNEFDYLQVVIQWQPATCSDWTKPNPYCFRN---PDNRFSIHG 65
           ++ +L +L  + S      +FD+   V QW  + C    K    C+ N   P   F IHG
Sbjct: 10  LISLLVILPSVFSASSSSEDFDFFYFVQQWPGSYCDTQKK---CCYPNSGKPAADFGIHG 69

Query: 66  VWPSLYNGGQTY---CSGS-PFDVNQISILQPGISEIWPNVA--TGDNLWLWGHEWDKHG 125
           +WP+  +G  TY   C  S PFD + IS L   + + WP +A  +G     W HEW+KHG
Sbjct: 70  LWPNYKDG--TYPSNCDASKPFDSSTISDLLTSMKKSWPTLACPSGSGEAFWEHEWEKHG 129

Query: 126 TCTEPILFDQEQYFSFAMDTYIENNMLFILENSQITPNGQVYYSRDQVYTAIRARTGKTP 185
           TC+E ++ DQ +YF  A++   + N+L  L  + I P+G+  YS + +  +I+   G TP
Sbjct: 130 TCSESVI-DQHEYFQTALNLKQKTNLLGALTKAGINPDGK-SYSLESIRDSIKESIGFTP 189

Query: 186 AVRCNYNYWTELQQLHEISLCYNWNATAFVDCPL 211
            V CN +  +   QL+++ LC + + +  ++CP+
Sbjct: 190 WVECNRD-GSGNSQLYQVYLCVDRSGSGLIECPV 215

[Close]

BLAST of HG10019714 vs. TAIR 10
Match: AT1G26820.1 (ribonuclease 3 )

HSP 1 Score: 112.5 bits (280), Expect = 4.7e-25
Identity = 69/222 (31.08%), Postives = 111/222 (50.00%), Query Frame = 0


Query: 4   KEIVLILSMLVMIVSCCEGVNEFDYLQVVIQWQPATCSDWTKPNPYCF---RNPDNRFSI 63
           K  + IL++  + V       +FD+   V+QW  A C      +  C+     P   F I
Sbjct: 2   KFFIFILALQQLYVQ--SFAQDFDFFYFVLQWPGAYCD---SRHSCCYPQTGKPAADFGI 61

Query: 64  HGVWPSLYNGG--QTYCSGSPFDVNQISILQPGISEIWPNVA--TGDNLWLWGHEWDKHG 123
           HG+WP+   GG  Q     S FD  ++S L   +   WP ++  + D +  W HEW+KHG
Sbjct: 62  HGLWPNYKTGGWPQNCNPDSRFDDLRVSDLMSDLQREWPTLSCPSNDGMKFWTHEWEKHG 121

Query: 124 TCTEPILFDQEQYFSFAMDTYIENNMLFILENSQITPNGQVYYSRDQVYTAIRARTGKTP 183
           TC E  L DQ  YF   +    + N+L  L N+ I P+ + Y  +D +   I+   G  P
Sbjct: 122 TCAESEL-DQHDYFEAGLKLKQKANLLHALTNAGIKPDDKFYEMKD-IENTIKQVVGFAP 181

Query: 184 AVRCNYNYWTELQQLHEISLCYNWNATAFVDCPLNAN-KCDN 218
            + CN +  +   QL++I LC + +A+ F++CP+  + +CD+
Sbjct: 182 GIECNKDS-SHNSQLYQIYLCVDTSASKFINCPVMPHGRCDS 215

[Close]

BLAST of HG10019714 vs. TAIR 10
Match: AT1G14210.1 (Ribonuclease T2 family protein )

HSP 1 Score: 104.4 bits (259), Expect = 1.3e-22
Identity = 69/226 (30.53%), Postives = 111/226 (49.12%), Query Frame = 0


Query: 7   VLILSMLV---MIVSCCEGVNEFDYLQVVIQWQPATCSDWTKPNPYCFRNPDNRFSIHGV 66
           ++I+S+L+   ++VS  +   +F++   V  W  A C       P    N  + F IHG+
Sbjct: 4   IIIVSLLILQSLVVSSSQTEPDFNFFYWVNYWPGAICDSQKGCCPPTKGNTASDFIIHGL 63

Query: 67  WPSLYNG-GQTYCSGSP-FDVNQISILQPGISEIWPN----VATGDNLWLWGHEWDKHGT 126
           WP   NG    +C  +  FD+++IS L   + + W          +   LW HEW+KHGT
Sbjct: 64  WPQFNNGTWPAFCDQTNLFDISKISDLVCQMEKKWTEWGVWACPSNETNLWEHEWNKHGT 123

Query: 127 CTEPILFDQEQYFSFAMDTYIENNMLFILENSQITPNGQVYYSRDQVYTAIRARTGKTPA 186
           C + I FDQ  YF   +    + ++L IL    I PN   +YS D++  AI+   G  P 
Sbjct: 124 CVQSI-FDQHSYFRTNLKFKHKVHLLNILIQKGIKPN-DGFYSLDEIKNAIKCAIGFAPG 183

Query: 187 VRCNYNYWTELQQLHEISLCYNWNATAFVDCPLNANKCDNNFVWYP 224
           + CN +     +QL +I +C +  A  FV+CP   +K   + + +P
Sbjct: 184 IECNEDVKGN-KQLFQIYICLDNYAKEFVECPYVPDKSCASKIKFP 226

[Close]

BLAST of HG10019714 vs. TAIR 10
Match: AT2G39780.1 (ribonuclease 2 )

HSP 1 Score: 103.2 bits (256), Expect = 2.8e-22
Identity = 63/212 (29.72%), Postives = 99/212 (46.70%), Query Frame = 0


Query: 13  LVMIVSCCEGV------------NEFDYLQVVIQWQPATCSDWTK---PNPYCFRNPD-- 72
           L+++V+C  G              EFDY  + +QW P T    T+       C R  D  
Sbjct: 7   LLLLVACIAGAFAGDVIELNRSQREFDYFALSLQW-PGTYCRGTRHCCSKNACCRGSDAP 66

Query: 73  NRFSIHGVWPSLYNGGQ--TYCSGSPFDVNQISILQPGISEIWPNVA-------TGDNLW 132
            +F+IHG+WP  YN G   + C  S F   +IS L  G+ + WP+++        G    
Sbjct: 67  TQFTIHGLWPD-YNDGSWPSCCYRSDFKEKEISTLMDGLEKYWPSLSCGSPSSCNGGKGS 126

Query: 133 LWGHEWDKHGTCTEPILFDQEQYFSFAMDTYIENNMLFILENSQITPNGQVYYSRDQVYT 192
            WGHEW+KHGTC+ P+  D+  YF   ++ Y+++N+  +L  +    +    Y    + T
Sbjct: 127 FWGHEWEKHGTCSSPVFHDEYNYFLTTLNLYLKHNVTDVLYQAGYVASNSEKYPLGGIVT 186

Query: 193 AIRARTGKTPAVRCNYNYWTELQQLHEISLCY 199
           AI+     TP V C      +   + EI +C+
Sbjct: 187 AIQNAFHITPEVVC------KRDAIDEIRICF 210

The following BLAST results are available for this feature:

BLAST of HG10019714 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038903744.1	4.1e-116	81.47	ribonuclease MC-like [Benincasa hispida]	[more]
AEM42996.1	1.9e-105	76.62	S-RNase [Siraitia grosvenorii]	[more]
XP_022149793.1	1.2e-91	67.53	ribonuclease MC-like [Momordica charantia]	[more]
XP_022158939.1	2.0e-54	47.84	ribonuclease MC-like [Momordica charantia]	[more]
XP_038904516.1	7.7e-54	45.04	ribonuclease MC-like [Benincasa hispida]	[more]

BLAST of HG10019714 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P23540	1.5e-28	34.52	Ribonuclease MC OS=Momordica charantia OX=3673 PE=1 SV=1	[more]
O80324	1.7e-27	33.33	Ribonuclease S-6 OS=Pyrus pyrifolia OX=3767 PE=1 SV=1	[more]
P80022	3.7e-27	32.71	Extracellular ribonuclease LE OS=Solanum lycopersicum OX=4081 PE=1 SV=2	[more]
P80196	1.4e-26	32.47	Intracellular ribonuclease LX OS=Solanum lycopersicum OX=4081 GN=RNALX PE=1 SV=2	[more]
P42813	1.6e-25	32.71	Ribonuclease 1 OS=Arabidopsis thaliana OX=3702 GN=RNS1 PE=1 SV=1	[more]

BLAST of HG10019714 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
K7NBR4	9.3e-106	76.62	S-RNase OS=Siraitia grosvenorii OX=190515 PE=2 SV=1	[more]
A0A6J1D7Q5	5.9e-92	67.53	ribonuclease MC-like OS=Momordica charantia OX=3673 GN=LOC111018138 PE=3 SV=1	[more]
A0A6J1E0X1	9.8e-55	47.84	ribonuclease MC-like OS=Momordica charantia OX=3673 GN=LOC111025395 PE=3 SV=1	[more]
A0A6J1DQK2	1.2e-49	48.67	ribonuclease MC-like OS=Momordica charantia OX=3673 GN=LOC111023418 PE=3 SV=1	[more]
A0A6J1E266	1.4e-48	44.89	ribonuclease MC-like OS=Momordica charantia OX=3673 GN=LOC111025771 PE=3 SV=1	[more]

BLAST of HG10019714 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G14220.1	1.6e-28	35.32	Ribonuclease T2 family protein	[more]
AT2G02990.1	1.1e-26	32.71	ribonuclease 1	[more]
AT1G26820.1	4.7e-25	31.08	ribonuclease 3	[more]
AT1G14210.1	1.3e-22	30.53	Ribonuclease T2 family protein	[more]
AT2G39780.1	2.8e-22	29.72	ribonuclease 2	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 227..232
None	No IPR available	PANTHER	PTHR11240:SF49	RIBONUCLEASE 3	coord: 12..224
None	No IPR available	PROSITE	PS51257	PROKAR_LIPOPROTEIN	coord: 1..19 score: 6.0
IPR036430	Ribonuclease T2-like superfamily	GENE3D	3.90.730.10		coord: 21..230 e-value: 2.0E-50 score: 173.7
IPR036430	Ribonuclease T2-like superfamily	SUPERFAMILY	55895	Ribonuclease Rh-like	coord: 26..220
IPR001568	Ribonuclease T2-like	PFAM	PF00445	Ribonuclease_T2	coord: 26..208 e-value: 1.1E-39 score: 136.5
IPR001568	Ribonuclease T2-like	PANTHER	PTHR11240	RIBONUCLEASE T2	coord: 12..224
IPR033130	Ribonuclease T2, His active site 2	PROSITE	PS00531	RNASE_T2_2	coord: 107..118
IPR033697	Ribonuclease T2, eukaryotic	CDD	cd01061	RNase_T2_euk	coord: 26..222 e-value: 3.49922E-57 score: 178.295

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10019714.1	HG10019714.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic
molecular_function	GO:0033897	ribonuclease T2 activity
molecular_function	GO:0003723	RNA binding