HG10019474 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10019474
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Phytocyanin domain-containing protein
Location	Chr04: 22213663 .. 22215228 (-)
RNA-Seq Expression	HG10019474
Synteny	HG10019474

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCGGCCTCGCCCCACCTCATTGCCTTCTTCCTCCTCCTCTGCGCCGCCGTCGCCGTCTTCCCCGTCTCTGCCACCGACCACATCGTCGGCGCCAACCGCGGCTGGAACCCCGGCATTAACTACACTCTCTGGGCTAACAACCACACCTTCTACGTTGGCGACCTCATCTGTAAGTTATAAATCCTCTCTCTCTCTCTCTCTCTCTACCCTGAAATTTTGTATAGATCTTTCCACAAGGGAGGTTATAGAAGCTTTTTTTTTTGTGTTATAATCTTTTGAATTCAATGAAAAGTATGATTCACGTGTTATTCCTATTTTGAGAGATCAAACGTTGGAATTCTCATTCATAGTTACAATGTTGTATTCTTTGAAGATGTGCAATTGTTCAGTCCTTCCTTCTCTGCCCTACCCTTGTAAGTTAATGAAAATAATAAATGACTCGACGAAGGAAGTAACTCTTGTGGTCACTTGTTTAAGGTTTAGGTAGTAGTGTGGGCTCTTGATTATAAATAATCTCAGCAAAAACCAAGGTAGTAGAGTTAAATAGTTGTCTCTTGAGAGTAATAGTGGTGTGGACAAGCTGACTTGGATACTTACAAATATTACTTGATATTGGTAGTTTTGTTGCATTTCAAATGGTTATTGATAGGGAGAGAGTTGGCAAAGATAAAAGTTAGGTATAATTTTTGGAAGTTAGTCCATTATGGGTTTGTGGTAGTAAAACTAGAAAGACAACTCTCCAGTAAACTATTGTTATAGTGTAATGTACGGTGATCATTGGTCAGCCGGTGTCGGCTTTGGGCTCAGACTGATGCTAACCACTGGTATTTCAATGTTCGTCAGTTTTGACGAAGATGGTAATGCCGATCGACCAACTGCTCGTCGGTCGGCCGATTTTTTGATTTCATGTCTCAGGTGAGCTAGCTGGAGAAAAAAAACGAAGGGGGAGATGGAAAGCTGAAAAAGCAGCAAAATCGATTTTTTCGGTTCCATGTCTCGGTCGGTTTGAGCCTCTTTGGGCTCATCAGCGACCGACCTCCGACCAAAATATCATTAAACTGACTGACCGAAGTCGGTTTGGTCAGTTTTGGTCGGCTGACTCTATTTTTCGGTCTTCCTTGCTGACCCCTAATGTAATGTCTCTTTTGATATTGAAGTATAGTTAGTGTTACATTATCCCAAGTCCTAACGCCTTGCTTACAAACCAAATATTTGGCAGCATTTAGGTATCAGAAGAACCAATACAATGTGTTCGAGGTGAACCAATCAGGATACGGCAACTGCACCACAGATGGGGCGTTTGGGAATTGGAGCAGTGGCAAGGACTTCATTCCTCTCAACAAGGCCCAAAGGTACTACTTCATTTGTGGCAATGGACAGTGTTTTAATGGCATGAAGGTGACCATTCTTGTTCATCCTCTTCCTCCTCCTCCATCTTCTCCTCTCGCCACCAAGCATCTCTCACCCTCCTCCGCCACAGCCTGGGCGGGTTCTCGACAATGGCGGATTCGTGCTCTGCTCATCTCTCTGGCTTTGATTTGGTTTGGATCTGACTGGATTTAG

mRNA sequence

ATGCCGGCCTCGCCCCACCTCATTGCCTTCTTCCTCCTCCTCTGCGCCGCCGTCGCCGTCTTCCCCGTCTCTGCCACCGACCACATCGTCGGCGCCAACCGCGGCTGGAACCCCGGCATTAACTACACTCTCTGGGCTAACAACCACACCTTCTACGTTGGCGACCTCATCTCCGGTGTCGGCTTTGGGCTCAGACTGATGCTAACCACTGGTATTTCAATGTTCGTCAGTTTTGACGAAGATGGTAATGCCGATCGACCAACTGCTCGTCGGTCGGCCGATTTTTTGATTTCATGTCTCAGTATAGTTAGTGTTACATTATCCCAAGTCCTAACGCCTTGCTTACAAACCAAATATTTGGCAGCATTTAGGTATCAGAAGAACCAATACAATGTGTTCGAGGTGAACCAATCAGGATACGGCAACTGCACCACAGATGGGGCGTTTGGGAATTGGAGCAGTGGCAAGGACTTCATTCCTCTCAACAAGGCCCAAAGGTACTACTTCATTTGTGGCAATGGACAGTGTTTTAATGGCATGAAGGTGACCATTCTTGTTCATCCTCTTCCTCCTCCTCCATCTTCTCCTCTCGCCACCAAGCATCTCTCACCCTCCTCCGCCACAGCCTGGGCGGGTTCTCGACAATGGCGGATTCGTGCTCTGCTCATCTCTCTGGCTTTGATTTGGTTTGGATCTGACTGGATTTAG

Coding sequence (CDS)

ATGCCGGCCTCGCCCCACCTCATTGCCTTCTTCCTCCTCCTCTGCGCCGCCGTCGCCGTCTTCCCCGTCTCTGCCACCGACCACATCGTCGGCGCCAACCGCGGCTGGAACCCCGGCATTAACTACACTCTCTGGGCTAACAACCACACCTTCTACGTTGGCGACCTCATCTCCGGTGTCGGCTTTGGGCTCAGACTGATGCTAACCACTGGTATTTCAATGTTCGTCAGTTTTGACGAAGATGGTAATGCCGATCGACCAACTGCTCGTCGGTCGGCCGATTTTTTGATTTCATGTCTCAGTATAGTTAGTGTTACATTATCCCAAGTCCTAACGCCTTGCTTACAAACCAAATATTTGGCAGCATTTAGGTATCAGAAGAACCAATACAATGTGTTCGAGGTGAACCAATCAGGATACGGCAACTGCACCACAGATGGGGCGTTTGGGAATTGGAGCAGTGGCAAGGACTTCATTCCTCTCAACAAGGCCCAAAGGTACTACTTCATTTGTGGCAATGGACAGTGTTTTAATGGCATGAAGGTGACCATTCTTGTTCATCCTCTTCCTCCTCCTCCATCTTCTCCTCTCGCCACCAAGCATCTCTCACCCTCCTCCGCCACAGCCTGGGCGGGTTCTCGACAATGGCGGATTCGTGCTCTGCTCATCTCTCTGGCTTTGATTTGGTTTGGATCTGACTGGATTTAG

Protein sequence

MPASPHLIAFFLLLCAAVAVFPVSATDHIVGANRGWNPGINYTLWANNHTFYVGDLISGVGFGLRLMLTTGISMFVSFDEDGNADRPTARRSADFLISCLSIVSVTLSQVLTPCLQTKYLAAFRYQKNQYNVFEVNQSGYGNCTTDGAFGNWSSGKDFIPLNKAQRYYFICGNGQCFNGMKVTILVHPLPPPPSSPLATKHLSPSSATAWAGSRQWRIRALLISLALIWFGSDWI

Homology

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BLAST of HG10019474 vs. NCBI nr
Match: KAG6581622.1 (Lamin-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 308.9 bits (790), Expect = 3.7e-80
Identity = 156/235 (66.38%), Postives = 163/235 (69.36%), Query Frame = 0


Query: 1   MPASPHLIAFFLLLCAAVAVFPVSATDHIVGANRGWNPGINYTLWANNHTFYVGDLISGV 60
           MPASP L+AFFLLLC A +VFPVSATDHIVGANRGWNPGINYTLWANNHTF+VGDLIS  
Sbjct: 1   MPASPQLLAFFLLLCTAASVFPVSATDHIVGANRGWNPGINYTLWANNHTFFVGDLIS-- 60

Query: 61  GFGLRLMLTTGISMFVSFDEDGNADRPTARRSADFLISCLSIVSVTLSQVLTPCLQTKYL 120
                                                                       
Sbjct: 61  ------------------------------------------------------------ 120

Query: 121 AAFRYQKNQYNVFEVNQSGYGNCTTDGAFGNWSSGKDFIPLNKAQRYYFICGNGQCFNGM 180
             FRYQKNQYNVFEVNQSGY NCTT+GAFGNWSSGKDFIPLNKAQRYYFICGNGQCFNGM
Sbjct: 121 --FRYQKNQYNVFEVNQSGYDNCTTEGAFGNWSSGKDFIPLNKAQRYYFICGNGQCFNGM 171

Query: 181 KVTILVHPLPPPPSSPLATKHLSPSSATAWAGSRQWRIRALLISLALIWFGSDWI 236
           KVTILVHPLPPPPSSPLA+K  SPSSAT W GSRQW+IRALL+SLALIWFGSDWI
Sbjct: 181 KVTILVHPLPPPPSSPLASKDSSPSSATPWTGSRQWQIRALLVSLALIWFGSDWI 171

[Close]

BLAST of HG10019474 vs. NCBI nr
Match: XP_023526524.1 (lamin-like protein [Cucurbita pepo subsp. pepo])

HSP 1 Score: 306.6 bits (784), Expect = 1.8e-79
Identity = 156/235 (66.38%), Postives = 163/235 (69.36%), Query Frame = 0


Query: 1   MPASPHLIAFFLLLCAAVAVFPVSATDHIVGANRGWNPGINYTLWANNHTFYVGDLISGV 60
           MPASPHL+AFFLLLC A +VFPVSATDHIVGANRGWNPGINYTLWANNHTF+VGDLIS  
Sbjct: 1   MPASPHLLAFFLLLCTAASVFPVSATDHIVGANRGWNPGINYTLWANNHTFFVGDLIS-- 60

Query: 61  GFGLRLMLTTGISMFVSFDEDGNADRPTARRSADFLISCLSIVSVTLSQVLTPCLQTKYL 120
                                                                       
Sbjct: 61  ------------------------------------------------------------ 120

Query: 121 AAFRYQKNQYNVFEVNQSGYGNCTTDGAFGNWSSGKDFIPLNKAQRYYFICGNGQCFNGM 180
             FRYQKNQYNVFEVNQSGY NCTT+GAFGNWSSGKDFIPLNKAQRYYFICGNGQCFNGM
Sbjct: 121 --FRYQKNQYNVFEVNQSGYDNCTTEGAFGNWSSGKDFIPLNKAQRYYFICGNGQCFNGM 171

Query: 181 KVTILVHPLPPPPSSPLATKHLSPSSATAWAGSRQWRIRALLISLALIWFGSDWI 236
           KVTILVHPLPPPPSSPLA+K  SPSSAT   GSRQW+IRALL+SLALIWFGSDWI
Sbjct: 181 KVTILVHPLPPPPSSPLASKDSSPSSATPRTGSRQWQIRALLVSLALIWFGSDWI 171

[Close]

BLAST of HG10019474 vs. NCBI nr
Match: XP_038903873.1 (lamin-like protein [Benincasa hispida])

HSP 1 Score: 305.4 bits (781), Expect = 4.1e-79
Identity = 156/233 (66.95%), Postives = 162/233 (69.53%), Query Frame = 0


Query: 3   ASPHLIAFFLLLCAAVAVFPVSATDHIVGANRGWNPGINYTLWANNHTFYVGDLISGVGF 62
           ASPHL+AFFLLLCAAV+VFPVSATDHIVGANRGWNPGINYTLWANNHTFYVGDLIS    
Sbjct: 4   ASPHLLAFFLLLCAAVSVFPVSATDHIVGANRGWNPGINYTLWANNHTFYVGDLIS---- 63

Query: 63  GLRLMLTTGISMFVSFDEDGNADRPTARRSADFLISCLSIVSVTLSQVLTPCLQTKYLAA 122
                                                                       
Sbjct: 64  ------------------------------------------------------------ 123

Query: 123 FRYQKNQYNVFEVNQSGYGNCTTDGAFGNWSSGKDFIPLNKAQRYYFICGNGQCFNGMKV 182
           FRYQKNQYNVFEVNQSGY NCTT+GA GNWSSGKDFIPL KAQRYYFICGNGQCFNGMKV
Sbjct: 124 FRYQKNQYNVFEVNQSGYDNCTTEGALGNWSSGKDFIPLQKAQRYYFICGNGQCFNGMKV 172

Query: 183 TILVHPLPPPPSSPLATKHLSPSSATAWAGSRQWRIRALLISLALIWFGSDWI 236
           T+LVHPLPPPPSSPL T+H SPSSATA  GS+QWRIRALLISLALIWFGSDWI
Sbjct: 184 TVLVHPLPPPPSSPLGTEHSSPSSATAPEGSQQWRIRALLISLALIWFGSDWI 172

[Close]

BLAST of HG10019474 vs. NCBI nr
Match: KAG7018121.1 (Lamin-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 303.9 bits (777), Expect = 1.2e-78
Identity = 155/235 (65.96%), Postives = 162/235 (68.94%), Query Frame = 0


Query: 1   MPASPHLIAFFLLLCAAVAVFPVSATDHIVGANRGWNPGINYTLWANNHTFYVGDLISGV 60
           MPASP L+AFFLLLC A +VFPVSATDHIVGANRGWNPGINYTLWANNHTF+VGDLIS  
Sbjct: 1   MPASPQLLAFFLLLCTAASVFPVSATDHIVGANRGWNPGINYTLWANNHTFFVGDLIS-- 60

Query: 61  GFGLRLMLTTGISMFVSFDEDGNADRPTARRSADFLISCLSIVSVTLSQVLTPCLQTKYL 120
                                                                       
Sbjct: 61  ------------------------------------------------------------ 120

Query: 121 AAFRYQKNQYNVFEVNQSGYGNCTTDGAFGNWSSGKDFIPLNKAQRYYFICGNGQCFNGM 180
             FRYQKNQYNVFEVNQSGY NCTT+GAFGNWSSGKDFIPLNKAQRYYFICGNGQCFNGM
Sbjct: 121 --FRYQKNQYNVFEVNQSGYDNCTTEGAFGNWSSGKDFIPLNKAQRYYFICGNGQCFNGM 171

Query: 181 KVTILVHPLPPPPSSPLATKHLSPSSATAWAGSRQWRIRALLISLALIWFGSDWI 236
           KVTILVHPLPPPPSSPLA+K  SPSSAT   GSRQW+IRALL+SLALIWFGSDWI
Sbjct: 181 KVTILVHPLPPPPSSPLASKDSSPSSATPRTGSRQWKIRALLVSLALIWFGSDWI 171

[Close]

BLAST of HG10019474 vs. NCBI nr
Match: XP_022934432.1 (lamin-like protein [Cucurbita moschata])

HSP 1 Score: 302.0 bits (772), Expect = 4.5e-78
Identity = 154/235 (65.53%), Postives = 161/235 (68.51%), Query Frame = 0


Query: 1   MPASPHLIAFFLLLCAAVAVFPVSATDHIVGANRGWNPGINYTLWANNHTFYVGDLISGV 60
           MPASP L+AFFLLLC A +VFPVSATDHIVGANRGWNPGINYTLWANNHTF+VGDLIS  
Sbjct: 1   MPASPQLLAFFLLLCTAASVFPVSATDHIVGANRGWNPGINYTLWANNHTFFVGDLIS-- 60

Query: 61  GFGLRLMLTTGISMFVSFDEDGNADRPTARRSADFLISCLSIVSVTLSQVLTPCLQTKYL 120
                                                                       
Sbjct: 61  ------------------------------------------------------------ 120

Query: 121 AAFRYQKNQYNVFEVNQSGYGNCTTDGAFGNWSSGKDFIPLNKAQRYYFICGNGQCFNGM 180
             FRYQKNQYNVFEVNQSGY NCTT+GAFGNWSSGKDFIPLNKAQRYYFICGNGQCFNGM
Sbjct: 121 --FRYQKNQYNVFEVNQSGYDNCTTEGAFGNWSSGKDFIPLNKAQRYYFICGNGQCFNGM 171

Query: 181 KVTILVHPLPPPPSSPLATKHLSPSSATAWAGSRQWRIRALLISLALIWFGSDWI 236
           KVTILVHPLPPPPSSPLA+K  SPSSAT   GSRQW+IRAL +SLALIWFGSDWI
Sbjct: 181 KVTILVHPLPPPPSSPLASKDSSPSSATPRTGSRQWQIRALFVSLALIWFGSDWI 171

[Close]

BLAST of HG10019474 vs. ExPASy Swiss-Prot
Match: Q39131 (Lamin-like protein OS=Arabidopsis thaliana OX=3702 GN=At5g15350 PE=2 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 4.6e-17
Identity = 62/229 (27.07%), Postives = 90/229 (39.30%), Query Frame = 0


Query: 10  FFLLLCAAVAVF-------PVSATDHIVGANRGWNPGINYTLWANNHTFYVGDLISGVGF 69
           F +L+ A V  F        V+A  + VG N+ WNP INYT+WA    FY+GD +     
Sbjct: 4   FTVLITAVVLAFLMAAPMPGVTAKKYTVGENKFWNPNINYTIWAQGKHFYLGDWL----- 63

Query: 70  GLRLMLTTGISMFVSFDEDGNADRPTARRSADFLISCLSIVSVTLSQVLTPCLQTKYLAA 129
                                                                       
Sbjct: 64  -----------------------------------------------------------Y 123

Query: 130 FRYQKNQYNVFEVNQSGYGNCTTDGAFGNWS--SGKDFIPLNKAQRYYFICGNGQCFNGM 189
           F + +NQ+N+ EVN++ Y  C  D    NW+  +G+D + LN+ + YY + G G C+ GM
Sbjct: 124 FVFDRNQHNILEVNKTDYEGCIADHPIRNWTRGAGRDIVTLNQTKHYYLLDGKGGCYGGM 165

Query: 190 KVTILVHPLPPPPSSPLATKHLSPSSATAWAGSRQWRIRALLISLALIW 230
           K+++ V  LPPPP S       S S  T   G  Q+ I   L +   +W
Sbjct: 184 KLSVKVEKLPPPPKSAPVKNIGSVSMVT---GLAQFMIPVSLFAFPAMW 165

[Close]

BLAST of HG10019474 vs. ExPASy Swiss-Prot
Match: A0A0M4FTF3 (Blue copper protein OS=Petunia hybrida OX=4102 GN=BCP PE=2 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 9.7e-07
Identity = 44/182 (24.18%), Postives = 68/182 (37.36%), Query Frame = 0


Query: 25  ATDHIVGANRGWNPGINYTLWANNHTFYVGDLIS-------GVGFGLRLMLTTGISMFVS 84
           AT ++VG +RGW    +Y  WA N TF VGD ++         G+ +  +   G   ++ 
Sbjct: 24  ATQYLVGDDRGWTLDFDYQTWAKNKTFKVGDTLAPPPSEGLTSGYDVITLTKPGKKWYI- 83

Query: 85  FDEDGNADRPTARRSADFLISCLSIVSVTLSQVLTPCLQTKY------------------ 144
                    PT     +  +              +P  QT+Y                  
Sbjct: 84  ------CGVPTHCSDYNQKLVITVEDGAPAPAPASPAPQTEYWVGDDKGWTIDVDYQAWA 143

Query: 145 ---------LAAFRYQKNQYNVFEVNQSGYGNCTTDGAFGNWSSGKDFIPLNKAQRYYFI 173
                       F+Y K  +NVF+VNQ+G+ NC         +SG D I L    + ++I
Sbjct: 144 KGKTFKVGDTLVFKYTKGHHNVFKVNQTGFQNCIAPPPSEGLTSGHDVITLAAPGKKWYI 198

[Close]

BLAST of HG10019474 vs. ExPASy Swiss-Prot
Match: Q9SK27 (Early nodulin-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=At2g25060 PE=2 SV=2)

HSP 1 Score: 53.5 bits (127), Expect = 3.7e-06
Identity = 26/80 (32.50%), Postives = 45/80 (56.25%), Query Frame = 0


Query: 123 FRYQKNQYNVFEVNQSGYGNCTTDGAFGNWSSGKDFIPLNKAQRYYFICG-NGQCFNGMK 182
           FRY+  + +V EV +  Y +C T     N++ G+  + L+++  +YFI G NG C  G K
Sbjct: 67  FRYESGKDSVLEVTKEAYNSCNTTNPLANYTDGETKVKLDRSGPFYFISGANGHCEKGQK 126

Query: 183 VTILV----HPLPPPPSSPL 198
           ++++V    H +  P  SP+
Sbjct: 127 LSLVVISPRHSVISPAPSPV 146

[Close]

BLAST of HG10019474 vs. ExPASy Swiss-Prot
Match: P00303 (Basic blue protein OS=Cucumis sativus OX=3659 PE=1 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 2.4e-05
Identity = 23/62 (37.10%), Postives = 32/62 (51.61%), Query Frame = 0


Query: 123 FRYQKNQYNVFEVNQSGYGNCTTDGAFGNWSSGKDFIPLNKAQRYYFICGNGQCFNGMKV 182
           F Y    +NV  VNQ G+  C T      ++SG+D I L K Q Y+     G C +GMK+
Sbjct: 32  FNYNPXMHNVVVVNQGGFSTCNTPAGAKVYTSGRDQIKLPKGQSYFICNFPGHCQSGMKI 91

Query: 183 TI 185
            +
Sbjct: 92  AV 93

[Close]

BLAST of HG10019474 vs. ExPASy TrEMBL
Match: A0A6J1F2R0 (lamin-like protein OS=Cucurbita moschata OX=3662 GN=LOC111441613 PE=4 SV=1)

HSP 1 Score: 302.0 bits (772), Expect = 2.2e-78
Identity = 154/235 (65.53%), Postives = 161/235 (68.51%), Query Frame = 0


Query: 1   MPASPHLIAFFLLLCAAVAVFPVSATDHIVGANRGWNPGINYTLWANNHTFYVGDLISGV 60
           MPASP L+AFFLLLC A +VFPVSATDHIVGANRGWNPGINYTLWANNHTF+VGDLIS  
Sbjct: 1   MPASPQLLAFFLLLCTAASVFPVSATDHIVGANRGWNPGINYTLWANNHTFFVGDLIS-- 60

Query: 61  GFGLRLMLTTGISMFVSFDEDGNADRPTARRSADFLISCLSIVSVTLSQVLTPCLQTKYL 120
                                                                       
Sbjct: 61  ------------------------------------------------------------ 120

Query: 121 AAFRYQKNQYNVFEVNQSGYGNCTTDGAFGNWSSGKDFIPLNKAQRYYFICGNGQCFNGM 180
             FRYQKNQYNVFEVNQSGY NCTT+GAFGNWSSGKDFIPLNKAQRYYFICGNGQCFNGM
Sbjct: 121 --FRYQKNQYNVFEVNQSGYDNCTTEGAFGNWSSGKDFIPLNKAQRYYFICGNGQCFNGM 171

Query: 181 KVTILVHPLPPPPSSPLATKHLSPSSATAWAGSRQWRIRALLISLALIWFGSDWI 236
           KVTILVHPLPPPPSSPLA+K  SPSSAT   GSRQW+IRAL +SLALIWFGSDWI
Sbjct: 181 KVTILVHPLPPPPSSPLASKDSSPSSATPRTGSRQWQIRALFVSLALIWFGSDWI 171

[Close]

BLAST of HG10019474 vs. ExPASy TrEMBL
Match: A0A6J1J7T1 (lamin-like protein OS=Cucurbita maxima OX=3661 GN=LOC111482049 PE=4 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 2.4e-77
Identity = 153/235 (65.11%), Postives = 161/235 (68.51%), Query Frame = 0


Query: 1   MPASPHLIAFFLLLCAAVAVFPVSATDHIVGANRGWNPGINYTLWANNHTFYVGDLISGV 60
           MPAS  L+ FFLLLC A +VFPVSATDHIVGANRGWNPGINYTLWANNHTF+VGDLIS  
Sbjct: 1   MPASLQLLPFFLLLCTAASVFPVSATDHIVGANRGWNPGINYTLWANNHTFFVGDLIS-- 60

Query: 61  GFGLRLMLTTGISMFVSFDEDGNADRPTARRSADFLISCLSIVSVTLSQVLTPCLQTKYL 120
                                                                       
Sbjct: 61  ------------------------------------------------------------ 120

Query: 121 AAFRYQKNQYNVFEVNQSGYGNCTTDGAFGNWSSGKDFIPLNKAQRYYFICGNGQCFNGM 180
             FRYQKNQYNVFEVNQSGY NCTT+GAFGNWSSGKDFIPLNKAQRYYFICGNGQCFNGM
Sbjct: 121 --FRYQKNQYNVFEVNQSGYDNCTTEGAFGNWSSGKDFIPLNKAQRYYFICGNGQCFNGM 171

Query: 181 KVTILVHPLPPPPSSPLATKHLSPSSATAWAGSRQWRIRALLISLALIWFGSDWI 236
           KVTILVHPLPPPPSSPLA+K+ SPSSAT   GSRQW+IRALL+SLALIWFGSDWI
Sbjct: 181 KVTILVHPLPPPPSSPLASKNSSPSSATPRTGSRQWQIRALLVSLALIWFGSDWI 171

[Close]

BLAST of HG10019474 vs. ExPASy TrEMBL
Match: A0A1S3CN34 (lamin-like protein OS=Cucumis melo OX=3656 GN=LOC103502815 PE=4 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 4.6e-76
Identity = 152/235 (64.68%), Postives = 160/235 (68.09%), Query Frame = 0


Query: 1   MPASPHLIAFFLLLCAAVAVFPVSATDHIVGANRGWNPGINYTLWANNHTFYVGDLISGV 60
           M ASPHL+ FFLLLCAAV++FPVSATDHIVGANRGWNPGINYTLWANNHTFYVGDLIS  
Sbjct: 1   MLASPHLLPFFLLLCAAVSLFPVSATDHIVGANRGWNPGINYTLWANNHTFYVGDLIS-- 60

Query: 61  GFGLRLMLTTGISMFVSFDEDGNADRPTARRSADFLISCLSIVSVTLSQVLTPCLQTKYL 120
                                                                       
Sbjct: 61  ------------------------------------------------------------ 120

Query: 121 AAFRYQKNQYNVFEVNQSGYGNCTTDGAFGNWSSGKDFIPLNKAQRYYFICGNGQCFNGM 180
             FRYQKNQYNVFEVNQ+GY NCTT+GAFGNWSSGKDFIPLNKAQRYYFICGNGQCFNGM
Sbjct: 121 --FRYQKNQYNVFEVNQTGYDNCTTEGAFGNWSSGKDFIPLNKAQRYYFICGNGQCFNGM 171

Query: 181 KVTILVHPLPPPPSSPLATKHLSPSSATAWAGSRQWRIRALLISLALIWFGSDWI 236
           KVTILVHPLPPPPSSPLAT+H SPSSAT   GS+QW  RALLISLA+I FGS WI
Sbjct: 181 KVTILVHPLPPPPSSPLATEHHSPSSATPCVGSQQWGFRALLISLAMILFGSHWI 171

[Close]

BLAST of HG10019474 vs. ExPASy TrEMBL
Match: A0A0A0LCI9 (Phytocyanin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G710810 PE=4 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 4.7e-73
Identity = 147/235 (62.55%), Postives = 155/235 (65.96%), Query Frame = 0


Query: 1   MPASPHLIAFFLLLCAAVAVFPVSATDHIVGANRGWNPGINYTLWANNHTFYVGDLISGV 60
           M  SP L+ FFLLLCAAV++FPVSATDHIVGANRGWNPGINYTLWANNHTFYVGDLIS  
Sbjct: 1   MLTSPRLLPFFLLLCAAVSLFPVSATDHIVGANRGWNPGINYTLWANNHTFYVGDLIS-- 60

Query: 61  GFGLRLMLTTGISMFVSFDEDGNADRPTARRSADFLISCLSIVSVTLSQVLTPCLQTKYL 120
                                                                       
Sbjct: 61  ------------------------------------------------------------ 120

Query: 121 AAFRYQKNQYNVFEVNQSGYGNCTTDGAFGNWSSGKDFIPLNKAQRYYFICGNGQCFNGM 180
             FRYQKNQYNVFEVNQ+GY NCT +GA GNWSSGKDFIPL+KAQRYYFICGNGQCFNGM
Sbjct: 121 --FRYQKNQYNVFEVNQTGYDNCTIEGASGNWSSGKDFIPLDKAQRYYFICGNGQCFNGM 171

Query: 181 KVTILVHPLPPPPSSPLATKHLSPSSATAWAGSRQWRIRALLISLALIWFGSDWI 236
           KVTILVHPLPPPPSSPLA +H SPSSAT W GSRQW  RALLISLA+I  GS WI
Sbjct: 181 KVTILVHPLPPPPSSPLAMEHNSPSSATPWVGSRQWGFRALLISLAMILLGSHWI 171

[Close]

BLAST of HG10019474 vs. ExPASy TrEMBL
Match: A0A6J1DHI7 (lamin-like protein OS=Momordica charantia OX=3673 GN=LOC111020966 PE=4 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 5.6e-66
Identity = 140/232 (60.34%), Postives = 149/232 (64.22%), Query Frame = 0


Query: 4   SPHLIAFFLLLCAAVAVFPVSATDHIVGANRGWNPGINYTLWANNHTFYVGDLISGVGFG 63
           SPHL   FL+L AA AV  VSATDHIVGANRGWNPGINYTLWANNHTF+VGD IS     
Sbjct: 6   SPHLAFSFLILAAAAAV--VSATDHIVGANRGWNPGINYTLWANNHTFFVGDFIS----- 65

Query: 64  LRLMLTTGISMFVSFDEDGNADRPTARRSADFLISCLSIVSVTLSQVLTPCLQTKYLAAF 123
                                                                      F
Sbjct: 66  -----------------------------------------------------------F 125

Query: 124 RYQKNQYNVFEVNQSGYGNCTTDGAFGNWSSGKDFIPLNKAQRYYFICGNGQCFNGMKVT 183
           RYQK QYNVFEVNQSGYGNCTT+GAFGNWSSGKDFI L +A+RYYFICGNGQC+NGMKVT
Sbjct: 126 RYQKIQYNVFEVNQSGYGNCTTEGAFGNWSSGKDFILLKEAKRYYFICGNGQCYNGMKVT 171

Query: 184 ILVHPLPPPPSSPLATKHLSPSSATAWAGSRQWRIRALLISLALIWFGSDWI 236
           ILVHPLPPPPSSPLA KH SPSSA A  GS   RI+ALL+SLALIWFGS+WI
Sbjct: 186 ILVHPLPPPPSSPLAAKHSSPSSAPARLGSWPTRIQALLVSLALIWFGSEWI 171

[Close]

BLAST of HG10019474 vs. TAIR 10
Match: AT5G15350.1 (early nodulin-like protein 17 )

HSP 1 Score: 89.7 bits (221), Expect = 3.3e-18
Identity = 62/229 (27.07%), Postives = 90/229 (39.30%), Query Frame = 0


Query: 10  FFLLLCAAVAVF-------PVSATDHIVGANRGWNPGINYTLWANNHTFYVGDLISGVGF 69
           F +L+ A V  F        V+A  + VG N+ WNP INYT+WA    FY+GD +     
Sbjct: 4   FTVLITAVVLAFLMAAPMPGVTAKKYTVGENKFWNPNINYTIWAQGKHFYLGDWL----- 63

Query: 70  GLRLMLTTGISMFVSFDEDGNADRPTARRSADFLISCLSIVSVTLSQVLTPCLQTKYLAA 129
                                                                       
Sbjct: 64  -----------------------------------------------------------Y 123

Query: 130 FRYQKNQYNVFEVNQSGYGNCTTDGAFGNWS--SGKDFIPLNKAQRYYFICGNGQCFNGM 189
           F + +NQ+N+ EVN++ Y  C  D    NW+  +G+D + LN+ + YY + G G C+ GM
Sbjct: 124 FVFDRNQHNILEVNKTDYEGCIADHPIRNWTRGAGRDIVTLNQTKHYYLLDGKGGCYGGM 165

Query: 190 KVTILVHPLPPPPSSPLATKHLSPSSATAWAGSRQWRIRALLISLALIW 230
           K+++ V  LPPPP S       S S  T   G  Q+ I   L +   +W
Sbjct: 184 KLSVKVEKLPPPPKSAPVKNIGSVSMVT---GLAQFMIPVSLFAFPAMW 165

[Close]

BLAST of HG10019474 vs. TAIR 10
Match: AT3G01070.1 (early nodulin-like protein 16 )

HSP 1 Score: 87.4 bits (215), Expect = 1.6e-17
Identity = 56/192 (29.17%), Postives = 81/192 (42.19%), Query Frame = 0


Query: 12  LLLCAAVAVFPVSATD-----HIVGANRGWNPGINYTLWANNHTFYVGDLISGVGFGLRL 71
           +L+  AV  F ++AT+       VG N+ WNP INYT+WA +  FY+ D +         
Sbjct: 6   VLVAGAVLAFLLAATNVTAKRWTVGDNKFWNPNINYTIWAQDKHFYLDDWL--------- 65

Query: 72  MLTTGISMFVSFDEDGNADRPTARRSADFLISCLSIVSVTLSQVLTPCLQTKYLAAFRYQ 131
                                                                   F Y+
Sbjct: 66  -------------------------------------------------------YFVYE 125

Query: 132 KNQYNVFEVNQSGYGNCTTDGAFGNWS--SGKDFIPLNKAQRYYFICGN-GQCFNGMKVT 191
           +NQYNV EVN++ Y +C  +    NWS  +G+D + LN  + YY I GN G C+ GMK+ 
Sbjct: 126 RNQYNVIEVNETNYISCNPNNPIANWSRGAGRDLVHLNVTRHYYLISGNGGGCYGGMKLA 133

Query: 192 ILVHPLPPPPSS 196
           +LV   PPPP++
Sbjct: 186 VLVEKPPPPPAA 133

[Close]

BLAST of HG10019474 vs. TAIR 10
Match: AT4G12880.1 (early nodulin-like protein 19 )

HSP 1 Score: 80.5 bits (197), Expect = 2.0e-15
Identity = 52/191 (27.23%), Postives = 78/191 (40.84%), Query Frame = 0


Query: 9   AFFLLLCAAVAVFPVSATDHIVGANRGWNPGINYTLWANNHTFYVGDLISGVGFGLRLML 68
           A  L    A  +  V+A  ++VG  + WNP INYTLWA    FYVGD +           
Sbjct: 10  AVVLAFLVAAPIPEVTAKKYLVGDKKFWNPNINYTLWAQGKHFYVGDWL----------- 69

Query: 69  TTGISMFVSFDEDGNADRPTARRSADFLISCLSIVSVTLSQVLTPCLQTKYLAAFRYQKN 128
                                                                 F + ++
Sbjct: 70  -----------------------------------------------------YFVFYRD 129

Query: 129 QYNVFEVNQSGYGNCTTDGAFGNWS--SGKDFIPLNKAQRYYFICGNGQCFNGMKVTILV 188
           Q+N+ EVN++ Y  C ++    N++  +G+D +PL + +RYY + G G C  GMK+ +LV
Sbjct: 130 QHNILEVNKADYEKCISNRPIRNYTRGAGRDIVPLYETRRYYLLDGRGGCVQGMKLDVLV 136

Query: 189 H-PLPPPPSSP 197
             P PPPP +P
Sbjct: 190 ETPPPPPPFTP 136

[Close]

BLAST of HG10019474 vs. TAIR 10
Match: AT4G12880.2 (early nodulin-like protein 19 )

HSP 1 Score: 67.0 bits (162), Expect = 2.3e-11
Identity = 30/77 (38.96%), Postives = 50/77 (64.94%), Query Frame = 0


Query: 123 FRYQKNQYNVFEVNQSGYGNCTTDGAFGNWS--SGKDFIPLNKAQRYYFICGNGQCFNGM 182
           F + ++Q+N+ EVN++ Y  C ++    N++  +G+D +PL + +RYY + G G C  GM
Sbjct: 22  FVFYRDQHNILEVNKADYEKCISNRPIRNYTRGAGRDIVPLYETRRYYLLDGRGGCVQGM 81

Query: 183 KVTILVH-PLPPPPSSP 197
           K+ +LV  P PPPP +P
Sbjct: 82  KLDVLVETPPPPPPFTP 98

[Close]

BLAST of HG10019474 vs. TAIR 10
Match: AT2G27035.1 (early nodulin-like protein 20 )

HSP 1 Score: 65.1 bits (157), Expect = 8.7e-11
Identity = 47/196 (23.98%), Postives = 71/196 (36.22%), Query Frame = 0


Query: 11  FLLLCAAVAVFPVSATDHIVGANR-GWNPGINYTLWANNHTFYVGDLISGVGFGLRLMLT 70
           ++ +   + V  V ++ H VG  R  WN  +N++ WAN+  FY GD +            
Sbjct: 11  YVTVMILIIVVEVESSLHRVGGGRYTWNSDVNFSDWANHQRFYSGDWL------------ 70

Query: 71  TGISMFVSFDEDGNADRPTARRSADFLISCLSIVSVTLSQVLTPCLQTKYLAAFRYQKNQ 130
                                                                F + + +
Sbjct: 71  ----------------------------------------------------YFGFNRTR 130

Query: 131 YNVFEVNQSGYGNCT-TDGAFGNWSSGKDFIPLNKAQRYYFICGNGQCFNGMKVTILVHP 190
           +N+ +VN+S Y  C   D  F     G+D   L + + YYFICG G C  GMK+ I V P
Sbjct: 131 HNILQVNKSSYEQCVDNDYIFNITRGGRDVFQLLEPKPYYFICGRGYCLKGMKLAITVLP 142

Query: 191 LPPPPSSPLATKHLSP 205
            PPP +    T   +P
Sbjct: 191 QPPPSAPTNFTSTTTP 142

The following BLAST results are available for this feature:

BLAST of HG10019474 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6581622.1	3.7e-80	66.38	Lamin-like protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023526524.1	1.8e-79	66.38	lamin-like protein [Cucurbita pepo subsp. pepo]	[more]
XP_038903873.1	4.1e-79	66.95	lamin-like protein [Benincasa hispida]	[more]
KAG7018121.1	1.2e-78	65.96	Lamin-like protein [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022934432.1	4.5e-78	65.53	lamin-like protein [Cucurbita moschata]	[more]

BLAST of HG10019474 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q39131	4.6e-17	27.07	Lamin-like protein OS=Arabidopsis thaliana OX=3702 GN=At5g15350 PE=2 SV=1	[more]
A0A0M4FTF3	9.7e-07	24.18	Blue copper protein OS=Petunia hybrida OX=4102 GN=BCP PE=2 SV=1	[more]
Q9SK27	3.7e-06	32.50	Early nodulin-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=At2g25060 PE=2 S...	[more]
P00303	2.4e-05	37.10	Basic blue protein OS=Cucumis sativus OX=3659 PE=1 SV=1	[more]

BLAST of HG10019474 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F2R0	2.2e-78	65.53	lamin-like protein OS=Cucurbita moschata OX=3662 GN=LOC111441613 PE=4 SV=1	[more]
A0A6J1J7T1	2.4e-77	65.11	lamin-like protein OS=Cucurbita maxima OX=3661 GN=LOC111482049 PE=4 SV=1	[more]
A0A1S3CN34	4.6e-76	64.68	lamin-like protein OS=Cucumis melo OX=3656 GN=LOC103502815 PE=4 SV=1	[more]
A0A0A0LCI9	4.7e-73	62.55	Phytocyanin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G710810...	[more]
A0A6J1DHI7	5.6e-66	60.34	lamin-like protein OS=Momordica charantia OX=3673 GN=LOC111020966 PE=4 SV=1	[more]

BLAST of HG10019474 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G15350.1	3.3e-18	27.07	early nodulin-like protein 17	[more]
AT3G01070.1	1.6e-17	29.17	early nodulin-like protein 16	[more]
AT4G12880.1	2.0e-15	27.23	early nodulin-like protein 19	[more]
AT4G12880.2	2.3e-11	38.96	early nodulin-like protein 19	[more]
AT2G27035.1	8.7e-11	23.98	early nodulin-like protein 20	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003245	Phytocyanin domain	PFAM	PF02298	Cu_bind_like	coord: 122..180 e-value: 1.1E-10 score: 41.3
IPR003245	Phytocyanin domain	PROSITE	PS51485	PHYTOCYANIN	coord: 26..188 score: 26.16004
IPR008972	Cupredoxin	GENE3D	2.60.40.420		coord: 24..189 e-value: 7.7E-27 score: 95.6
IPR008972	Cupredoxin	SUPERFAMILY	49503	Cupredoxins	coord: 122..187
IPR008972	Cupredoxin	SUPERFAMILY	49503	Cupredoxins	coord: 23..57
None	No IPR available	PANTHER	PTHR33021:SF13	OS09G0557900 PROTEIN	coord: 9..212
IPR039391	Phytocyanin	PANTHER	PTHR33021	BLUE COPPER PROTEIN	coord: 9..212

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10019474.1	HG10019474.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022900	electron transport chain
cellular_component	GO:0031224	intrinsic component of membrane
molecular_function	GO:0009055	electron transfer activity