HG10019373 (gene) Bottle gourd (Hangzhou Gourd) v1

BLAST of HG10019373 vs. NCBI nr
Match: XP_022934819.1 (large ribosomal RNA subunit accumulation protein YCED homolog 2, chloroplastic isoform X1 [Cucurbita moschata])

HSP 1 Score: 193.7 bits (491), Expect = 8.8e-46
Identity = 101/119 (84.87%), Postives = 109/119 (91.60%), Query Frame = 0

Query: 1   MRFQFSNITIKVLTHSIISMKQITANFNVLVLSSNRANREIHLPDIGGDDPSVIYVKPGL 60
           MR QFS+I  +VLT +II ++QI ANFNVLVLSSNRA RE  LPDIGGDDPSVIYVKPGL
Sbjct: 160 MRVQFSSIPTEVLTPTIILIQQINANFNVLVLSSNRAKRETTLPDIGGDDPSVIYVKPGL 219

Query: 61  EADLDSLVCDTIRLTTSTKDTCSELCEKSQPTVQYIGAQNAASIDKRWSRLLELRKSNA 120
           EADLDSLV DTIRLTTSTKDTCSELCEKSQP+VQYIGAQNAASIDKRWSRLLELRKS++
Sbjct: 220 EADLDSLVRDTIRLTTSTKDTCSELCEKSQPSVQYIGAQNAASIDKRWSRLLELRKSHS 278

BLAST of HG10019373 vs. NCBI nr
Match: XP_022983268.1 (large ribosomal RNA subunit accumulation protein YCED homolog 2, chloroplastic isoform X2 [Cucurbita maxima])

HSP 1 Score: 191.8 bits (486), Expect = 3.4e-45
Identity = 100/119 (84.03%), Postives = 108/119 (90.76%), Query Frame = 0

Query: 1   MRFQFSNITIKVLTHSIISMKQITANFNVLVLSSNRANREIHLPDIGGDDPSVIYVKPGL 60
           MR QFS+I  +VLT  II ++QI ANFNVLVLSSNRA RE  LP+IGGDDPSVIYVKPGL
Sbjct: 160 MRVQFSSIPTEVLTPKIILIQQINANFNVLVLSSNRAKRETTLPEIGGDDPSVIYVKPGL 219

Query: 61  EADLDSLVCDTIRLTTSTKDTCSELCEKSQPTVQYIGAQNAASIDKRWSRLLELRKSNA 120
           EADLDSLV DTIRLTTSTKDTCSELCEKSQP+VQYIGAQNAASIDKRWSRLLELRKS++
Sbjct: 220 EADLDSLVRDTIRLTTSTKDTCSELCEKSQPSVQYIGAQNAASIDKRWSRLLELRKSHS 278

BLAST of HG10019373 vs. NCBI nr
Match: KAG6581325.1 (Large ribosomal RNA subunit accumulation protein YCED-like 2, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 191.0 bits (484), Expect = 5.7e-45
Identity = 100/119 (84.03%), Postives = 108/119 (90.76%), Query Frame = 0

Query: 1   MRFQFSNITIKVLTHSIISMKQITANFNVLVLSSNRANREIHLPDIGGDDPSVIYVKPGL 60
           MR Q S+I  +VLT +II ++QI ANFNVLVLSSNRA RE  LPDIGGDDPSVIYVKPGL
Sbjct: 1   MRVQVSSIPTEVLTPTIILIQQINANFNVLVLSSNRAKRETTLPDIGGDDPSVIYVKPGL 60

Query: 61  EADLDSLVCDTIRLTTSTKDTCSELCEKSQPTVQYIGAQNAASIDKRWSRLLELRKSNA 120
           EADLDSLV DTIRLTTSTKDTCSELCEKSQP+VQYIGAQNAASIDKRWSRLLELRKS++
Sbjct: 61  EADLDSLVRDTIRLTTSTKDTCSELCEKSQPSVQYIGAQNAASIDKRWSRLLELRKSHS 119

BLAST of HG10019373 vs. NCBI nr
Match: XP_011651803.2 (large ribosomal RNA subunit accumulation protein YCED homolog 2, chloroplastic isoform X1 [Cucumis sativus] >KAE8650945.1 hypothetical protein Csa_002331 [Cucumis sativus])

HSP 1 Score: 187.6 bits (475), Expect = 6.3e-44
Identity = 93/99 (93.94%), Postives = 97/99 (97.98%), Query Frame = 0

Query: 21  KQITANFNVLVLSSNRANREIHLPDIGGDDPSVIYVKPGLEADLDSLVCDTIRLTTSTKD 80
           ++I ANFNVLVLSSNRANREIHLPDIGGDDPSVIYVKPGLEADLDSLV DTIRLTTSTKD
Sbjct: 133 REINANFNVLVLSSNRANREIHLPDIGGDDPSVIYVKPGLEADLDSLVRDTIRLTTSTKD 192

Query: 81  TCSELCEKSQPTVQYIGAQNAASIDKRWSRLLELRKSNA 120
           TCSE+CEKSQPTVQYIGAQNAASIDKRWSRLLELRKSN+
Sbjct: 193 TCSEMCEKSQPTVQYIGAQNAASIDKRWSRLLELRKSNS 231

BLAST of HG10019373 vs. NCBI nr
Match: XP_031738565.1 (large ribosomal RNA subunit accumulation protein YCED homolog 2, chloroplastic [Cucumis sativus] >KAE8650911.1 hypothetical protein Csa_001037 [Cucumis sativus])

HSP 1 Score: 187.6 bits (475), Expect = 6.3e-44
Identity = 93/99 (93.94%), Postives = 97/99 (97.98%), Query Frame = 0

Query: 21  KQITANFNVLVLSSNRANREIHLPDIGGDDPSVIYVKPGLEADLDSLVCDTIRLTTSTKD 80
           ++I ANFNVLVLSSNRANREIHLPDIGGDDPSVIYVKPGLEADLDSLV DTIRLTTSTKD
Sbjct: 132 REINANFNVLVLSSNRANREIHLPDIGGDDPSVIYVKPGLEADLDSLVRDTIRLTTSTKD 191

Query: 81  TCSELCEKSQPTVQYIGAQNAASIDKRWSRLLELRKSNA 120
           TCSE+CEKSQPTVQYIGAQNAASIDKRWSRLLELRKSN+
Sbjct: 192 TCSEMCEKSQPTVQYIGAQNAASIDKRWSRLLELRKSNS 230

BLAST of HG10019373 vs. ExPASy Swiss-Prot
Match: Q9C5M1 (Large ribosomal RNA subunit accumulation protein YCED homolog 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g19800 PE=2 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 2.0e-29
Identity = 66/111 (59.46%), Postives = 82/111 (73.87%), Query Frame = 0

Query: 6   SNITIKVLTHSIISMKQITANFNVLVLSSNRANREIHLPDIGGDDPSVIYVKPGLEADLD 65
           ++I  K    S +  + I  +F V +L S+R NR   LP+IGGDDPSVIYV+PG EA+LD
Sbjct: 118 TSIARKCSICSSLYPRLIDTSFTVWILPSSRENRASTLPEIGGDDPSVIYVRPGYEANLD 177

Query: 66  SLVCDTIRLTTSTKDTCSELCEKSQPTVQYIGAQNAASIDKRWSRLLELRK 117
           SLV DTIRLTT  KD CS+ CEKS+PT+ Y+G  N AS+DKRWSRLLEL+K
Sbjct: 178 SLVQDTIRLTTYAKDICSDSCEKSEPTLHYVGQTNTASVDKRWSRLLELKK 228

BLAST of HG10019373 vs. ExPASy TrEMBL
Match: A0A6J1F3N3 (large ribosomal RNA subunit accumulation protein YCED homolog 2, chloroplastic isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111441878 PE=4 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 4.3e-46
Identity = 101/119 (84.87%), Postives = 109/119 (91.60%), Query Frame = 0

Query: 1   MRFQFSNITIKVLTHSIISMKQITANFNVLVLSSNRANREIHLPDIGGDDPSVIYVKPGL 60
           MR QFS+I  +VLT +II ++QI ANFNVLVLSSNRA RE  LPDIGGDDPSVIYVKPGL
Sbjct: 160 MRVQFSSIPTEVLTPTIILIQQINANFNVLVLSSNRAKRETTLPDIGGDDPSVIYVKPGL 219

Query: 61  EADLDSLVCDTIRLTTSTKDTCSELCEKSQPTVQYIGAQNAASIDKRWSRLLELRKSNA 120
           EADLDSLV DTIRLTTSTKDTCSELCEKSQP+VQYIGAQNAASIDKRWSRLLELRKS++
Sbjct: 220 EADLDSLVRDTIRLTTSTKDTCSELCEKSQPSVQYIGAQNAASIDKRWSRLLELRKSHS 278

BLAST of HG10019373 vs. ExPASy TrEMBL
Match: A0A6J1J7A5 (large ribosomal RNA subunit accumulation protein YCED homolog 2, chloroplastic isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111481900 PE=4 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 1.6e-45
Identity = 100/119 (84.03%), Postives = 108/119 (90.76%), Query Frame = 0

Query: 1   MRFQFSNITIKVLTHSIISMKQITANFNVLVLSSNRANREIHLPDIGGDDPSVIYVKPGL 60
           MR QFS+I  +VLT  II ++QI ANFNVLVLSSNRA RE  LP+IGGDDPSVIYVKPGL
Sbjct: 160 MRVQFSSIPTEVLTPKIILIQQINANFNVLVLSSNRAKRETTLPEIGGDDPSVIYVKPGL 219

Query: 61  EADLDSLVCDTIRLTTSTKDTCSELCEKSQPTVQYIGAQNAASIDKRWSRLLELRKSNA 120
           EADLDSLV DTIRLTTSTKDTCSELCEKSQP+VQYIGAQNAASIDKRWSRLLELRKS++
Sbjct: 220 EADLDSLVRDTIRLTTSTKDTCSELCEKSQPSVQYIGAQNAASIDKRWSRLLELRKSHS 278

BLAST of HG10019373 vs. ExPASy TrEMBL
Match: A0A0A0L9P4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G656510 PE=4 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 3.1e-44
Identity = 93/99 (93.94%), Postives = 97/99 (97.98%), Query Frame = 0

Query: 21  KQITANFNVLVLSSNRANREIHLPDIGGDDPSVIYVKPGLEADLDSLVCDTIRLTTSTKD 80
           ++I ANFNVLVLSSNRANREIHLPDIGGDDPSVIYVKPGLEADLDSLV DTIRLTTSTKD
Sbjct: 171 REINANFNVLVLSSNRANREIHLPDIGGDDPSVIYVKPGLEADLDSLVRDTIRLTTSTKD 230

Query: 81  TCSELCEKSQPTVQYIGAQNAASIDKRWSRLLELRKSNA 120
           TCSE+CEKSQPTVQYIGAQNAASIDKRWSRLLELRKSN+
Sbjct: 231 TCSEMCEKSQPTVQYIGAQNAASIDKRWSRLLELRKSNS 269

BLAST of HG10019373 vs. ExPASy TrEMBL
Match: A0A5D3C1F8 (DUF177 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1856G00270 PE=4 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 3.4e-43
Identity = 96/114 (84.21%), Postives = 101/114 (88.60%), Query Frame = 0

Query: 6   SNITIKVLTHSIISMKQITANFNVLVLSSNRANREIHLPDIGGDDPSVIYVKPGLEADLD 65
           ++ T K  T S+   ++I ANFNVLVLSSNRANREIHLPDIGGDDPSVIYVKPGLEADLD
Sbjct: 118 TSFTRKCCTCSLPYCREIKANFNVLVLSSNRANREIHLPDIGGDDPSVIYVKPGLEADLD 177

Query: 66  SLVCDTIRLTTSTKDTCSELCEKSQPTVQYIGAQNAASIDKRWSRLLELRKSNA 120
           SLV DTIRLTTSTKDTCSE CEKSQPTVQYIGAQNAASIDKRW RLLELRKS A
Sbjct: 178 SLVRDTIRLTTSTKDTCSESCEKSQPTVQYIGAQNAASIDKRWFRLLELRKSKA 231

BLAST of HG10019373 vs. ExPASy TrEMBL
Match: A0A1S3CFK7 (uncharacterized protein LOC103500366 OS=Cucumis melo OX=3656 GN=LOC103500366 PE=4 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 3.4e-43
Identity = 96/114 (84.21%), Postives = 101/114 (88.60%), Query Frame = 0

Query: 6   SNITIKVLTHSIISMKQITANFNVLVLSSNRANREIHLPDIGGDDPSVIYVKPGLEADLD 65
           ++ T K  T S+   ++I ANFNVLVLSSNRANREIHLPDIGGDDPSVIYVKPGLEADLD
Sbjct: 118 TSFTRKCCTCSLPYCREIKANFNVLVLSSNRANREIHLPDIGGDDPSVIYVKPGLEADLD 177

Query: 66  SLVCDTIRLTTSTKDTCSELCEKSQPTVQYIGAQNAASIDKRWSRLLELRKSNA 120
           SLV DTIRLTTSTKDTCSE CEKSQPTVQYIGAQNAASIDKRW RLLELRKS A
Sbjct: 178 SLVRDTIRLTTSTKDTCSESCEKSQPTVQYIGAQNAASIDKRWFRLLELRKSKA 231

BLAST of HG10019373 vs. TAIR 10
Match: AT3G19800.1 (Protein of unknown function (DUF177) )

HSP 1 Score: 129.8 bits (325), Expect = 1.5e-30
Identity = 66/111 (59.46%), Postives = 82/111 (73.87%), Query Frame = 0

Query: 6   SNITIKVLTHSIISMKQITANFNVLVLSSNRANREIHLPDIGGDDPSVIYVKPGLEADLD 65
           ++I  K    S +  + I  +F V +L S+R NR   LP+IGGDDPSVIYV+PG EA+LD
Sbjct: 118 TSIARKCSICSSLYPRLIDTSFTVWILPSSRENRASTLPEIGGDDPSVIYVRPGYEANLD 177

Query: 66  SLVCDTIRLTTSTKDTCSELCEKSQPTVQYIGAQNAASIDKRWSRLLELRK 117
           SLV DTIRLTT  KD CS+ CEKS+PT+ Y+G  N AS+DKRWSRLLEL+K
Sbjct: 178 SLVQDTIRLTTYAKDICSDSCEKSEPTLHYVGQTNTASVDKRWSRLLELKK 228

BLAST of HG10019373 vs. TAIR 10
Match: AT3G19800.2 (Protein of unknown function (DUF177) )

HSP 1 Score: 129.8 bits (325), Expect = 1.5e-30
Identity = 66/111 (59.46%), Postives = 82/111 (73.87%), Query Frame = 0

Query: 6   SNITIKVLTHSIISMKQITANFNVLVLSSNRANREIHLPDIGGDDPSVIYVKPGLEADLD 65
           ++I  K    S +  + I  +F V +L S+R NR   LP+IGGDDPSVIYV+PG EA+LD
Sbjct: 115 TSIARKCSICSSLYPRLIDTSFTVWILPSSRENRASTLPEIGGDDPSVIYVRPGYEANLD 174

Query: 66  SLVCDTIRLTTSTKDTCSELCEKSQPTVQYIGAQNAASIDKRWSRLLELRK 117
           SLV DTIRLTT  KD CS+ CEKS+PT+ Y+G  N AS+DKRWSRLLEL+K
Sbjct: 175 SLVQDTIRLTTYAKDICSDSCEKSEPTLHYVGQTNTASVDKRWSRLLELKK 225