HG10019209 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10019209
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	thymocyte nuclear protein 1
Location	Chr04: 18703439 .. 18704014 (+)
RNA-Seq Expression	HG10019209
Synteny	HG10019209

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATTTAGGCGGCAACATATTCACGATTTTCCCGCCGGAAAAATCACCGACGTCACTATCTCTTCTTCTCCCACTTAACCGCCACAAGCGAACGCAGAAAACAATGGCCAACGCCGTCGCCGGAGACAGAAAACAGTATTGGCTTCTGAAGACGGAGCCGGCAGAGTGGTCGTGGGCGGACCAAGCCGCCAACGAGGGACGAACAAAGTGGGACGGCGTCAAAAACAAGCAAGCTCAGAAGCATCTCAAGTCCATGAAACTCGGCGACCTCTGTTTCTTCTACCACTCCGGCGCCAAGGCCCGCCGCGTCGTCGGCGTGGTCGCCGTCGCACGCGAGTGGTACTCGGCAGTCGACGAAGATGTCGTCGTGGACGTGGAGGCGGTCGGAGAGATGAGGGAGCCGGTGGATTTGAAAGAGATGAAGAAGGGGATGGAAGGGATGAAGAATTTTGCTCTGTTTCGGCAACCAAGGCTGTCGGTTGTGCCAGTTGCGAAGGAGATTTGGGATAAGATCTGTGAATTGGGAGGCGGATTTGAAGGAGATGGAACAGAGGGCGGCCATGGGAGTGAGTGA

mRNA sequence

ATGAATTTAGGCGGCAACATATTCACGATTTTCCCGCCGGAAAAATCACCGACGTCACTATCTCTTCTTCTCCCACTTAACCGCCACAAGCGAACGCAGAAAACAATGGCCAACGCCGTCGCCGGAGACAGAAAACAGTATTGGCTTCTGAAGACGGAGCCGGCAGAGTGGTCGTGGGCGGACCAAGCCGCCAACGAGGGACGAACAAAGTGGGACGGCGTCAAAAACAAGCAAGCTCAGAAGCATCTCAAGTCCATGAAACTCGGCGACCTCTGTTTCTTCTACCACTCCGGCGCCAAGGCCCGCCGCGTCGTCGGCGTGGTCGCCGTCGCACGCGAGTGGTACTCGGCAGTCGACGAAGATGTCGTCGTGGACGTGGAGGCGGTCGGAGAGATGAGGGAGCCGGTGGATTTGAAAGAGATGAAGAAGGGGATGGAAGGGATGAAGAATTTTGCTCTGTTTCGGCAACCAAGGCTGTCGGTTGTGCCAGTTGCGAAGGAGATTTGGGATAAGATCTGTGAATTGGGAGGCGGATTTGAAGGAGATGGAACAGAGGGCGGCCATGGGAGTGAGTGA

Coding sequence (CDS)

ATGAATTTAGGCGGCAACATATTCACGATTTTCCCGCCGGAAAAATCACCGACGTCACTATCTCTTCTTCTCCCACTTAACCGCCACAAGCGAACGCAGAAAACAATGGCCAACGCCGTCGCCGGAGACAGAAAACAGTATTGGCTTCTGAAGACGGAGCCGGCAGAGTGGTCGTGGGCGGACCAAGCCGCCAACGAGGGACGAACAAAGTGGGACGGCGTCAAAAACAAGCAAGCTCAGAAGCATCTCAAGTCCATGAAACTCGGCGACCTCTGTTTCTTCTACCACTCCGGCGCCAAGGCCCGCCGCGTCGTCGGCGTGGTCGCCGTCGCACGCGAGTGGTACTCGGCAGTCGACGAAGATGTCGTCGTGGACGTGGAGGCGGTCGGAGAGATGAGGGAGCCGGTGGATTTGAAAGAGATGAAGAAGGGGATGGAAGGGATGAAGAATTTTGCTCTGTTTCGGCAACCAAGGCTGTCGGTTGTGCCAGTTGCGAAGGAGATTTGGGATAAGATCTGTGAATTGGGAGGCGGATTTGAAGGAGATGGAACAGAGGGCGGCCATGGGAGTGAGTGA

Protein sequence

MNLGGNIFTIFPPEKSPTSLSLLLPLNRHKRTQKTMANAVAGDRKQYWLLKTEPAEWSWADQAANEGRTKWDGVKNKQAQKHLKSMKLGDLCFFYHSGAKARRVVGVVAVAREWYSAVDEDVVVDVEAVGEMREPVDLKEMKKGMEGMKNFALFRQPRLSVVPVAKEIWDKICELGGGFEGDGTEGGHGSE

Homology

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BLAST of HG10019209 vs. NCBI nr
Match: XP_016901490.1 (PREDICTED: thymocyte nuclear protein 1 [Cucumis melo] >ADN33814.1 hypothetical protein [Cucumis melo subsp. melo])

HSP 1 Score: 347.4 bits (890), Expect = 7.7e-92
Identity = 172/197 (87.31%), Postives = 184/197 (93.40%), Query Frame = 0


Query: 1   MNLGGNIFTIFPPEKSPTSLSLL-LPLNRHK-----RTQKTMANAVAGDRKQYWLLKTEP 60
           +NLG NI TIFPP  SPTS SLL LPLNRHK     R++KTMAN VAGD++QYWLLKTEP
Sbjct: 5   INLGANITTIFPPVTSPTSTSLLPLPLNRHKRNAVIRSEKTMANPVAGDKRQYWLLKTEP 64

Query: 61  AEWSWADQAANEGRTKWDGVKNKQAQKHLKSMKLGDLCFFYHSGAKARRVVGVVAVAREW 120
           AEWSWADQAAN+GR+KWDGVKNKQAQKHLKSMKLGD CFFYHSGAKARRVVGVVAVAREW
Sbjct: 65  AEWSWADQAANDGRSKWDGVKNKQAQKHLKSMKLGDRCFFYHSGAKARRVVGVVAVAREW 124

Query: 121 YSAVDEDVVVDVEAVGEMREPVDLKEMKKGMEGMKNFALFRQPRLSVVPVAKEIWDKICE 180
           YS+V+++VVVDVEAVGEMREPVDLKEMKKGMEGMKNFALFRQPRLSVVPVAKEIWDKICE
Sbjct: 125 YSSVEDEVVVDVEAVGEMREPVDLKEMKKGMEGMKNFALFRQPRLSVVPVAKEIWDKICE 184

Query: 181 LGGGFEGDGTEGGHGSE 192
           LGGGFEGDGTEGGHGS+
Sbjct: 185 LGGGFEGDGTEGGHGSD 201

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BLAST of HG10019209 vs. NCBI nr
Match: XP_004150262.2 (thymocyte nuclear protein 1 [Cucumis sativus] >KGN52742.1 hypothetical protein Csa_014551 [Cucumis sativus])

HSP 1 Score: 332.8 bits (852), Expect = 2.0e-87
Identity = 169/198 (85.35%), Postives = 178/198 (89.90%), Query Frame = 0


Query: 1   MNLGGNIFTIFPPEKSPTSLSLL-LPLNRHK------RTQKTMANAVAGDRKQYWLLKTE 60
           M LGGNI TIFP E  P+  SLL LPLN HK      R++KTMANAVAGD++QYWLLKTE
Sbjct: 5   MYLGGNITTIFPLEILPSLPSLLPLPLNHHKQISAVIRSEKTMANAVAGDKRQYWLLKTE 64

Query: 61  PAEWSWADQAANEGRTKWDGVKNKQAQKHLKSMKLGDLCFFYHSGAKARRVVGVVAVARE 120
           PAEWSWADQAAN+GRT WDGVKNKQAQKHLKSMKLGD CFFYHSGAKARRVVGVVAVARE
Sbjct: 65  PAEWSWADQAANDGRTTWDGVKNKQAQKHLKSMKLGDRCFFYHSGAKARRVVGVVAVARE 124

Query: 121 WYSAVDEDVVVDVEAVGEMREPVDLKEMKKGMEGMKNFALFRQPRLSVVPVAKEIWDKIC 180
           WYS+VD++VVVDVEAVGEMREPVDLKEMKK MEGMKNFALFRQPRLSVVPV KEIWDKIC
Sbjct: 125 WYSSVDDEVVVDVEAVGEMREPVDLKEMKKRMEGMKNFALFRQPRLSVVPVTKEIWDKIC 184

Query: 181 ELGGGFEGDGTEGGHGSE 192
           ELGGGFEGDGTEGG GSE
Sbjct: 185 ELGGGFEGDGTEGGDGSE 202

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BLAST of HG10019209 vs. NCBI nr
Match: XP_038905606.1 (thymocyte nuclear protein 1 [Benincasa hispida])

HSP 1 Score: 311.2 bits (796), Expect = 6.1e-81
Identity = 151/156 (96.79%), Postives = 153/156 (98.08%), Query Frame = 0


Query: 36  MANAVAGDRKQYWLLKTEPAEWSWADQAANEGRTKWDGVKNKQAQKHLKSMKLGDLCFFY 95
           MA  VAGDRKQYWLLKTEPAEWSWADQAAN+GRTKWDGVKNKQAQKHLKSMKLGDLCFFY
Sbjct: 1   MAKDVAGDRKQYWLLKTEPAEWSWADQAANDGRTKWDGVKNKQAQKHLKSMKLGDLCFFY 60

Query: 96  HSGAKARRVVGVVAVAREWYSAVDEDVVVDVEAVGEMREPVDLKEMKKGMEGMKNFALFR 155
           HSGAKARRVVGVVAVAREWYSA D+DVVVDVEAVGEMREPVDLKEMKKGMEGMKNFALFR
Sbjct: 61  HSGAKARRVVGVVAVAREWYSADDDDVVVDVEAVGEMREPVDLKEMKKGMEGMKNFALFR 120

Query: 156 QPRLSVVPVAKEIWDKICELGGGFEGDGTEGGHGSE 192
           QPRLSVVPVAKEIWDKICELGGGFEGDGTEGGHGSE
Sbjct: 121 QPRLSVVPVAKEIWDKICELGGGFEGDGTEGGHGSE 156

[Close]

BLAST of HG10019209 vs. NCBI nr
Match: KAA0044320.1 (thymocyte nuclear protein 1 [Cucumis melo var. makuwa] >TYK29448.1 thymocyte nuclear protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 305.1 bits (780), Expect = 4.4e-79
Identity = 145/156 (92.95%), Postives = 154/156 (98.72%), Query Frame = 0


Query: 36  MANAVAGDRKQYWLLKTEPAEWSWADQAANEGRTKWDGVKNKQAQKHLKSMKLGDLCFFY 95
           MAN VAGD++QYWLLKTEPAEWSWADQAAN+GR+KWDGVKNKQAQKHLKSMKLGD CFFY
Sbjct: 1   MANPVAGDKRQYWLLKTEPAEWSWADQAANDGRSKWDGVKNKQAQKHLKSMKLGDRCFFY 60

Query: 96  HSGAKARRVVGVVAVAREWYSAVDEDVVVDVEAVGEMREPVDLKEMKKGMEGMKNFALFR 155
           HSGAKARRVVGVVAVAREWYS+V+++VVVDVEAVGEMREPVDLKEMKKGMEGMKNFALFR
Sbjct: 61  HSGAKARRVVGVVAVAREWYSSVEDEVVVDVEAVGEMREPVDLKEMKKGMEGMKNFALFR 120

Query: 156 QPRLSVVPVAKEIWDKICELGGGFEGDGTEGGHGSE 192
           QPRLSVVPVAKEIWDKICELGGGFEGDGTEGGHGS+
Sbjct: 121 QPRLSVVPVAKEIWDKICELGGGFEGDGTEGGHGSD 156

[Close]

BLAST of HG10019209 vs. NCBI nr
Match: KAG7030934.1 (Thymocyte nuclear protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 303.1 bits (775), Expect = 1.7e-78
Identity = 155/197 (78.68%), Postives = 169/197 (85.79%), Query Frame = 0


Query: 3   LGGNIFTIFPPEKSPTSLSLLLPLNRHKRT-------QKTMANAVAGDRKQYWLLKTEPA 62
           +G N+  IFPP KSPTSLS LLPL    +T        K MA+A AGD+KQ+WLLKTEPA
Sbjct: 107 IGANVSAIFPPGKSPTSLS-LLPLPTSTKTTITSTSSSKIMADAAAGDKKQFWLLKTEPA 166

Query: 63  EWSWADQAANEGRTKWDGVKNKQAQKHLKSMKLGDLCFFYHSGAKARRVVGVVAVAREWY 122
           EWSWADQAAN GRTKWDGVKNKQAQK+LKSMKLGDLCFFYHSGAKARR+VGV++VAREWY
Sbjct: 167 EWSWADQAANGGRTKWDGVKNKQAQKYLKSMKLGDLCFFYHSGAKARRIVGVISVAREWY 226

Query: 123 SAVD-EDVVVDVEAVGEMREPVDLKEMKKGMEGMKNFALFRQPRLSVVPVAKEIWDKICE 182
           S  D  D VVDVEAVGEMRE VDLKEMKKG+EGMK+FALFRQPRLSVVPVAKEIW+KICE
Sbjct: 227 SEGDGGDAVVDVEAVGEMREAVDLKEMKKGIEGMKDFALFRQPRLSVVPVAKEIWEKICE 286

Query: 183 LGGGFEGDGTEGGHGSE 192
           LGGGFEGDGT+  HGSE
Sbjct: 287 LGGGFEGDGTDCRHGSE 302

[Close]

BLAST of HG10019209 vs. ExPASy Swiss-Prot
Match: Q91YJ3 (Thymocyte nuclear protein 1 OS=Mus musculus OX=10090 GN=Thyn1 PE=1 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 1.6e-12
Identity = 56/164 (34.15%), Postives = 85/164 (51.83%), Query Frame = 0


Query: 47  YWLLKTEP---------AEWSWADQAANEGRTK-WDGVKNKQAQKHLKSMKLGDLCFFYH 106
           YWL+K+EP          ++S  D  A   +T  WDGV+N QA+  L++MKL D  FFYH
Sbjct: 57  YWLMKSEPESRLEKGIDMKFSIEDLKAQPKQTACWDGVRNYQARNFLRAMKLEDEAFFYH 116

Query: 107 SGAKARRVVGVVAVAREWY---------------SAVDED---VVVDVEAVGEMREPVDL 166
           S  K   +VG++ + +E Y               S+ ++D    +VDV+ V  M+  + L
Sbjct: 117 SNCKQPGIVGLMKIVKEAYPDHTQFEKSNPHYDPSSKEDDPKWSMVDVQFVRMMKRFIPL 176

Query: 167 KEMK------KGMEG-MKNFALFRQPRLSVVPVAKEIWDKICEL 176
           +E+K      K   G +K+  LF + RLSV P+ +E +D I  L
Sbjct: 177 EELKTYHQAHKATGGPLKSMTLFTRQRLSVQPLTQEEFDFILSL 220

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BLAST of HG10019209 vs. ExPASy Swiss-Prot
Match: Q6P3E0 (Thymocyte nuclear protein 1 OS=Rattus norvegicus OX=10116 GN=Thyn1 PE=2 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 3.7e-12
Identity = 61/196 (31.12%), Postives = 93/196 (47.45%), Query Frame = 0


Query: 15  KSPTSLSLLLPLNRHKRTQKTMANAVAGDRKQYWLLKTEP---------AEWSWAD-QAA 74
           K+  S S  + L      + T       +   YWL+K+EP          ++S  D QA 
Sbjct: 25  KTENSESASVKLENSSLEKTTTFKTCGKNLSNYWLMKSEPESRLEKGIDMKFSIEDLQAQ 84

Query: 75  NEGRTKWDGVKNKQAQKHLKSMKLGDLCFFYHSGAKARRVVGVVAVAREWY--------- 134
            +  T WDGV+N QA   L++MKL D  FFYHS  K   +VG++ + +E Y         
Sbjct: 85  PKQTTCWDGVRNYQAWNFLRAMKLEDEAFFYHSNCKQPGIVGLMKIVKEAYPDHTQFEKN 144

Query: 135 ------SAVDED---VVVDVEAVGEMREPVDLKEMK------KGMEG-MKNFALFRQPRL 176
                 S+ +++    +VDV+ V  M+  + L E+K      K   G +K+  LF + RL
Sbjct: 145 DPHYDPSSKEDNPKWSMVDVQFVRMMKRFISLDELKTYHQAHKATGGPLKSMTLFTRQRL 204

[Close]

BLAST of HG10019209 vs. ExPASy Swiss-Prot
Match: Q9P016 (Thymocyte nuclear protein 1 OS=Homo sapiens OX=9606 GN=THYN1 PE=1 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.4e-11
Identity = 52/164 (31.71%), Postives = 84/164 (51.22%), Query Frame = 0


Query: 47  YWLLKTEP---------AEWSWADQAANEGRTK-WDGVKNKQAQKHLKSMKLGDLCFFYH 106
           +WL+K+EP          ++S  D  A   +T  WDGV+N QA+  L++MKLG+  FFYH
Sbjct: 56  HWLMKSEPESRLEKGVDVKFSIEDLKAQPKQTTCWDGVRNYQARNFLRAMKLGEEAFFYH 115

Query: 107 SGAKARRVVGVVAVAREWY---------------SAVDED---VVVDVEAVGEMREPVDL 166
           S  K   + G++ + +E Y               S+ +++    +VDV+ V  M+  + L
Sbjct: 116 SNCKEPGIAGLMKIVKEAYPDHTQFEKNNPHYDPSSKEDNPKWSMVDVQFVRMMKRFIPL 175

Query: 167 KEMK------KGMEG-MKNFALFRQPRLSVVPVAKEIWDKICEL 176
            E+K      K   G +KN  LF + RLS+ P+ +E +D +  L
Sbjct: 176 AELKSYHQAHKATGGPLKNMVLFTRQRLSIQPLTQEEFDFVLSL 219

[Close]

BLAST of HG10019209 vs. ExPASy Swiss-Prot
Match: Q90679 (Thymocyte nuclear protein 1 OS=Gallus gallus OX=9031 GN=THYN1 PE=1 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 2.4e-11
Identity = 54/164 (32.93%), Postives = 82/164 (50.00%), Query Frame = 0


Query: 47  YWLLKTEP---------AEWSWADQAANEGRTK-WDGVKNKQAQKHLKSMKLGDLCFFYH 106
           +WLLK+EP          ++S  D  A   +T  W+GV+N QA+  L++MKLG   FFYH
Sbjct: 73  HWLLKSEPESRLEKGVDVKFSIEDLKAQPNQTTFWEGVRNYQARNFLRAMKLGQQAFFYH 132

Query: 107 SGAKARRVVGVVAVAREWY---------------SAVDED---VVVDVEAVGEMREPVDL 166
           S  K   +VG+V + +E Y               S+  E+    +VDV+ V   +  + L
Sbjct: 133 SNCKEPGIVGIVKIVKEAYPDHTQFDQKDPHYDSSSRKENPKWSMVDVQFVRMTKRFIPL 192

Query: 167 KEMK------KGMEG-MKNFALFRQPRLSVVPVAKEIWDKICEL 176
            E+K      K   G +KN  LF + RLS+ P+ +E +D +  L
Sbjct: 193 SEIKTHHLAHKADGGPLKNMMLFSRQRLSIQPLTQEEFDFVLSL 236

[Close]

BLAST of HG10019209 vs. ExPASy Swiss-Prot
Match: Q6PFL8 (Thymocyte nuclear protein 1 OS=Danio rerio OX=7955 GN=thyn1 PE=2 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 3.2e-08
Identity = 48/163 (29.45%), Postives = 78/163 (47.85%), Query Frame = 0


Query: 48  WLLKTEP---------AEWSWADQAANEGRTK-WDGVKNKQAQKHLKSMKLGDLCFFYHS 107
           WL+K+EP          ++   D  A   +T  WDGV+N QA+  ++ MK+G   FFYHS
Sbjct: 63  WLMKSEPESRIENGVDVKFGIEDLKALPNQTGCWDGVRNYQARNFMREMKVGQQAFFYHS 122

Query: 108 GAKARRVVGVVAVAREWY----------------SAVDEDV--VVDVEAVGEMREPVDLK 167
             K   + G++ + +E Y                S  D     +VDV+    ++  + L 
Sbjct: 123 NCKEPGIAGLMKIVKEAYVDHTQFDKKDVHYDPSSKADNPKWHMVDVQFERMVKRFIPLA 182

Query: 168 EMKK-----GMEG--MKNFALFRQPRLSVVPVAKEIWDKICEL 176
           E+KK      ++G  +K+ ALF + RLSV P+  E ++ +  L
Sbjct: 183 ELKKYHLEHRVKGGPLKDMALFTRARLSVQPLTAEEFEFVLSL 225

[Close]

BLAST of HG10019209 vs. ExPASy TrEMBL
Match: E5GBH2 (EVE domain-containing protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 347.4 bits (890), Expect = 3.7e-92
Identity = 172/197 (87.31%), Postives = 184/197 (93.40%), Query Frame = 0


Query: 1   MNLGGNIFTIFPPEKSPTSLSLL-LPLNRHK-----RTQKTMANAVAGDRKQYWLLKTEP 60
           +NLG NI TIFPP  SPTS SLL LPLNRHK     R++KTMAN VAGD++QYWLLKTEP
Sbjct: 5   INLGANITTIFPPVTSPTSTSLLPLPLNRHKRNAVIRSEKTMANPVAGDKRQYWLLKTEP 64

Query: 61  AEWSWADQAANEGRTKWDGVKNKQAQKHLKSMKLGDLCFFYHSGAKARRVVGVVAVAREW 120
           AEWSWADQAAN+GR+KWDGVKNKQAQKHLKSMKLGD CFFYHSGAKARRVVGVVAVAREW
Sbjct: 65  AEWSWADQAANDGRSKWDGVKNKQAQKHLKSMKLGDRCFFYHSGAKARRVVGVVAVAREW 124

Query: 121 YSAVDEDVVVDVEAVGEMREPVDLKEMKKGMEGMKNFALFRQPRLSVVPVAKEIWDKICE 180
           YS+V+++VVVDVEAVGEMREPVDLKEMKKGMEGMKNFALFRQPRLSVVPVAKEIWDKICE
Sbjct: 125 YSSVEDEVVVDVEAVGEMREPVDLKEMKKGMEGMKNFALFRQPRLSVVPVAKEIWDKICE 184

Query: 181 LGGGFEGDGTEGGHGSE 192
           LGGGFEGDGTEGGHGS+
Sbjct: 185 LGGGFEGDGTEGGHGSD 201

[Close]

BLAST of HG10019209 vs. ExPASy TrEMBL
Match: A0A1S4E0I6 (thymocyte nuclear protein 1 OS=Cucumis melo OX=3656 GN=LOC103494826 PE=4 SV=1)

HSP 1 Score: 347.4 bits (890), Expect = 3.7e-92
Identity = 172/197 (87.31%), Postives = 184/197 (93.40%), Query Frame = 0


Query: 1   MNLGGNIFTIFPPEKSPTSLSLL-LPLNRHK-----RTQKTMANAVAGDRKQYWLLKTEP 60
           +NLG NI TIFPP  SPTS SLL LPLNRHK     R++KTMAN VAGD++QYWLLKTEP
Sbjct: 5   INLGANITTIFPPVTSPTSTSLLPLPLNRHKRNAVIRSEKTMANPVAGDKRQYWLLKTEP 64

Query: 61  AEWSWADQAANEGRTKWDGVKNKQAQKHLKSMKLGDLCFFYHSGAKARRVVGVVAVAREW 120
           AEWSWADQAAN+GR+KWDGVKNKQAQKHLKSMKLGD CFFYHSGAKARRVVGVVAVAREW
Sbjct: 65  AEWSWADQAANDGRSKWDGVKNKQAQKHLKSMKLGDRCFFYHSGAKARRVVGVVAVAREW 124

Query: 121 YSAVDEDVVVDVEAVGEMREPVDLKEMKKGMEGMKNFALFRQPRLSVVPVAKEIWDKICE 180
           YS+V+++VVVDVEAVGEMREPVDLKEMKKGMEGMKNFALFRQPRLSVVPVAKEIWDKICE
Sbjct: 125 YSSVEDEVVVDVEAVGEMREPVDLKEMKKGMEGMKNFALFRQPRLSVVPVAKEIWDKICE 184

Query: 181 LGGGFEGDGTEGGHGSE 192
           LGGGFEGDGTEGGHGS+
Sbjct: 185 LGGGFEGDGTEGGHGSD 201

[Close]

BLAST of HG10019209 vs. ExPASy TrEMBL
Match: A0A0A0KWC0 (EVE domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G000630 PE=4 SV=1)

HSP 1 Score: 332.8 bits (852), Expect = 9.4e-88
Identity = 169/198 (85.35%), Postives = 178/198 (89.90%), Query Frame = 0


Query: 1   MNLGGNIFTIFPPEKSPTSLSLL-LPLNRHK------RTQKTMANAVAGDRKQYWLLKTE 60
           M LGGNI TIFP E  P+  SLL LPLN HK      R++KTMANAVAGD++QYWLLKTE
Sbjct: 5   MYLGGNITTIFPLEILPSLPSLLPLPLNHHKQISAVIRSEKTMANAVAGDKRQYWLLKTE 64

Query: 61  PAEWSWADQAANEGRTKWDGVKNKQAQKHLKSMKLGDLCFFYHSGAKARRVVGVVAVARE 120
           PAEWSWADQAAN+GRT WDGVKNKQAQKHLKSMKLGD CFFYHSGAKARRVVGVVAVARE
Sbjct: 65  PAEWSWADQAANDGRTTWDGVKNKQAQKHLKSMKLGDRCFFYHSGAKARRVVGVVAVARE 124

Query: 121 WYSAVDEDVVVDVEAVGEMREPVDLKEMKKGMEGMKNFALFRQPRLSVVPVAKEIWDKIC 180
           WYS+VD++VVVDVEAVGEMREPVDLKEMKK MEGMKNFALFRQPRLSVVPV KEIWDKIC
Sbjct: 125 WYSSVDDEVVVDVEAVGEMREPVDLKEMKKRMEGMKNFALFRQPRLSVVPVTKEIWDKIC 184

Query: 181 ELGGGFEGDGTEGGHGSE 192
           ELGGGFEGDGTEGG GSE
Sbjct: 185 ELGGGFEGDGTEGGDGSE 202

[Close]

BLAST of HG10019209 vs. ExPASy TrEMBL
Match: A0A5D3E131 (Thymocyte nuclear protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G00410 PE=4 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 2.1e-79
Identity = 145/156 (92.95%), Postives = 154/156 (98.72%), Query Frame = 0


Query: 36  MANAVAGDRKQYWLLKTEPAEWSWADQAANEGRTKWDGVKNKQAQKHLKSMKLGDLCFFY 95
           MAN VAGD++QYWLLKTEPAEWSWADQAAN+GR+KWDGVKNKQAQKHLKSMKLGD CFFY
Sbjct: 1   MANPVAGDKRQYWLLKTEPAEWSWADQAANDGRSKWDGVKNKQAQKHLKSMKLGDRCFFY 60

Query: 96  HSGAKARRVVGVVAVAREWYSAVDEDVVVDVEAVGEMREPVDLKEMKKGMEGMKNFALFR 155
           HSGAKARRVVGVVAVAREWYS+V+++VVVDVEAVGEMREPVDLKEMKKGMEGMKNFALFR
Sbjct: 61  HSGAKARRVVGVVAVAREWYSSVEDEVVVDVEAVGEMREPVDLKEMKKGMEGMKNFALFR 120

Query: 156 QPRLSVVPVAKEIWDKICELGGGFEGDGTEGGHGSE 192
           QPRLSVVPVAKEIWDKICELGGGFEGDGTEGGHGS+
Sbjct: 121 QPRLSVVPVAKEIWDKICELGGGFEGDGTEGGHGSD 156

[Close]

BLAST of HG10019209 vs. ExPASy TrEMBL
Match: A0A6J1FML1 (thymocyte nuclear protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111447187 PE=4 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 8.0e-71
Identity = 136/157 (86.62%), Postives = 146/157 (92.99%), Query Frame = 0


Query: 36  MANAVAGDRKQYWLLKTEPAEWSWADQAANEGRTKWDGVKNKQAQKHLKSMKLGDLCFFY 95
           MA+A AGD+KQ+WLLKTEPAEWSWADQAAN GRTKWDGVKNKQAQK+LKSMKLGDLCFFY
Sbjct: 1   MADAAAGDKKQFWLLKTEPAEWSWADQAANGGRTKWDGVKNKQAQKYLKSMKLGDLCFFY 60

Query: 96  HSGAKARRVVGVVAVAREWYSAVD-EDVVVDVEAVGEMREPVDLKEMKKGMEGMKNFALF 155
           HSGAKARR+VGVV+VAREWY   D  D VVDVEAVGEMRE VDLKEMKKG+EGMK+FALF
Sbjct: 61  HSGAKARRIVGVVSVAREWYLEGDGGDAVVDVEAVGEMREAVDLKEMKKGIEGMKDFALF 120

Query: 156 RQPRLSVVPVAKEIWDKICELGGGFEGDGTEGGHGSE 192
           RQPRLSVVPVAKEIW+KICELGGGFEGDGT+  HGSE
Sbjct: 121 RQPRLSVVPVAKEIWEKICELGGGFEGDGTDCRHGSE 157

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BLAST of HG10019209 vs. TAIR 10
Match: AT2G14660.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0310 (InterPro:IPR002740); Has 2761 Blast hits to 2761 proteins in 686 species: Archae - 5; Bacteria - 1143; Metazoa - 73; Fungi - 78; Plants - 42; Viruses - 0; Other Eukaryotes - 1420 (source: NCBI BLink). )

HSP 1 Score: 198.4 bits (503), Expect = 5.4e-51
Identity = 102/156 (65.38%), Postives = 122/156 (78.21%), Query Frame = 0


Query: 42  GDRKQYWLLKTEPAEWSWADQAANEGRTKWDGVKNKQAQKHLKSMKLGDLCFFYHSGAKA 101
           G  K+YWLLKTEP EWSW+DQ +N G +KWDGVKNKQAQK+LKSM LGDLCFFYHSG K+
Sbjct: 2   GKTKRYWLLKTEPNEWSWSDQESNGGISKWDGVKNKQAQKNLKSMTLGDLCFFYHSGTKS 61

Query: 102 RRVVGVVAVAREWYS----AVDEDVVVDVEAVGEMREPVDLKEMKKGMEGM--KNFALFR 161
           R VVGVV V+REWY+     V+ +  VDV+A+GEMR+ VDLKEM KG +G+  K F LFR
Sbjct: 62  RCVVGVVEVSREWYTDDAEGVEGEGAVDVKAIGEMRKCVDLKEM-KGDKGIITKGFVLFR 121

Query: 162 QPRLSVVPVAKEIWDKICELGGGFEGDGTEGGHGSE 192
           QPRLSVVPV +++W+ ICELG GF GDG E    S+
Sbjct: 122 QPRLSVVPVEEDVWNMICELGNGFCGDGKEDCESSD 156

The following BLAST results are available for this feature:

BLAST of HG10019209 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016901490.1	7.7e-92	87.31	PREDICTED: thymocyte nuclear protein 1 [Cucumis melo] >ADN33814.1 hypothetical p...	[more]
XP_004150262.2	2.0e-87	85.35	thymocyte nuclear protein 1 [Cucumis sativus] >KGN52742.1 hypothetical protein C...	[more]
XP_038905606.1	6.1e-81	96.79	thymocyte nuclear protein 1 [Benincasa hispida]	[more]
KAA0044320.1	4.4e-79	92.95	thymocyte nuclear protein 1 [Cucumis melo var. makuwa] >TYK29448.1 thymocyte nuc...	[more]
KAG7030934.1	1.7e-78	78.68	Thymocyte nuclear protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma...	[more]

BLAST of HG10019209 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q91YJ3	1.6e-12	34.15	Thymocyte nuclear protein 1 OS=Mus musculus OX=10090 GN=Thyn1 PE=1 SV=1	[more]
Q6P3E0	3.7e-12	31.12	Thymocyte nuclear protein 1 OS=Rattus norvegicus OX=10116 GN=Thyn1 PE=2 SV=1	[more]
Q9P016	1.4e-11	31.71	Thymocyte nuclear protein 1 OS=Homo sapiens OX=9606 GN=THYN1 PE=1 SV=1	[more]
Q90679	2.4e-11	32.93	Thymocyte nuclear protein 1 OS=Gallus gallus OX=9031 GN=THYN1 PE=1 SV=1	[more]
Q6PFL8	3.2e-08	29.45	Thymocyte nuclear protein 1 OS=Danio rerio OX=7955 GN=thyn1 PE=2 SV=1	[more]

BLAST of HG10019209 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
E5GBH2	3.7e-92	87.31	EVE domain-containing protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
A0A1S4E0I6	3.7e-92	87.31	thymocyte nuclear protein 1 OS=Cucumis melo OX=3656 GN=LOC103494826 PE=4 SV=1	[more]
A0A0A0KWC0	9.4e-88	85.35	EVE domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G000630 PE=4 SV...	[more]
A0A5D3E131	2.1e-79	92.95	Thymocyte nuclear protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A6J1FML1	8.0e-71	86.62	thymocyte nuclear protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111447187 PE=4 S...	[more]

BLAST of HG10019209 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G14660.1	5.4e-51	65.38	unknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.590.10	ph1033 like domains	coord: 44..185 e-value: 5.2E-43 score: 148.4
None	No IPR available	PANTHER	PTHR14087	THYMOCYTE NUCLEAR PROTEIN 1	coord: 31..183
IPR002740	EVE domain	PFAM	PF01878	EVE	coord: 46..175 e-value: 1.4E-38 score: 132.2
IPR015947	PUA-like superfamily	SUPERFAMILY	88697	PUA domain-like	coord: 45..177

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10019209.1	HG10019209.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007166	cell surface receptor signaling pathway
biological_process	GO:0006468	protein phosphorylation
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004672	protein kinase activity