HG10019192 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10019192
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Beta-glucosidase 11-like isoform X1
Location	Chr04: 18510728 .. 18512072 (+)
RNA-Seq Expression	HG10019192
Synteny	HG10019192

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGGTCATACCTTTTGCACTTCGGAAGTTCAAACAATAATACCACTTCTAAGGGAAGTATATGATGATAGCATGACCAAAGTGTTATACGTTGGCCCCGATTCTTGTTCGATGATGTCTGAATTACTCATAGACGAAGAGGATTATGAAGCTTGGGGTGTGGAACCATATGGCTCTGATGCTAGTGACTTGTATTGTTGGGATCTCATCCATAAAGGCATCATTCGTGTTGCCGATATGAAATATTCTCTGCCTTATAGGGAAAAGTCATTTTCTCATGTTATAATTTCAGATACTTTGGAATATTTCTCTTCACGATACCTTAACAACACAATTCCTGAGTTGATGAGGGTATCTAGAGATGGAGTTATCATATTTGCTGGTAAATCCCTTATTATAGTTTTTGTTTTATGGAGATTCAAAACGCTCGAACTTAGAGATGAATATAACATAATTTCTGATTCATTTTTCTCATTTTCAATGTTATCTAGGTTATCCAGATTATCCAGTTTCAAAATTTACCAGATACAAATTCAAGCGCCAGGTTAGAATCATGGAACTTGAAGTCTGTTCCTCTTAGGTTGTGTTAGGTTCACACAAAGATAAAACTGCACTGCAATATCAAAAGAAATTACAATATAACAATAGCTTTTTGAGAGGGCTATATCTCTTTCAAACAATCTACCAAGAATAGATAATTACAATATATGACCTCCCCTCATGAACCCTAACTCTCTCAATTTACAACCAAGACCACTAGCTAATTACCACTATACCTTAATAATAATATCCTACTAATATTTCCAATGTATCTCCTAATGATACTCTCACAGATAATAGGAAATTTGATTTGATTCACACAAGTTAAATGTTGAATGAACATGGACCATGACTATGAAACAATCCGGTGGGGTTTGTTCACTCGCATTGCATATTCTGAAACAAAATGTGATGGCCAAGAAACTACATTAGAAGTGATTGAATATATTCTACTTGTTGGGAGGCAATGTTTGCCTTTCCCAGAGTAACTTTAAGCTTGGTTTAGAATGTGTTTCATACTTGATAATCGATATTGCATATCCTTCACTTAGGCAATTGGTAATTAAAAATTACTAGGTTTACATGCATTGGAAGTTTGCCTACTAATTAACAATGACCCATTTGGTTTTGATTTTGTTTGTAAATTTTGCAGGCCAAACTCCGAAGTCCTTCGTGGTGGAAAAGGTATTTAGTTCAAAGGAAGTTGGAAGAGAATGAAGCTGCTAAAAAGAGGTTTAAGAAAATTTTACGGGATATCTCATATAAACCAGCCTGCCAAATCTTTTTTCTCAAGTCAGGATGA

mRNA sequence

ATGGCAGGTCATACCTTTTGCACTTCGGAAGTTCAAACAATAATACCACTTCTAAGGGAAGTATATGATGATAGCATGACCAAAGTGTTATACGTTGGCCCCGATTCTTGTTCGATGATGTCTGAATTACTCATAGACGAAGAGGATTATGAAGCTTGGGGTGTGGAACCATATGGCTCTGATGCTAGTGACTTGTATTGTTGGGATCTCATCCATAAAGGCATCATTCGTGTTGCCGATATGAAATATTCTCTGCCTTATAGGGAAAAGTCATTTTCTCATGTTATAATTTCAGATACTTTGGAATATTTCTCTTCACGATACCTTAACAACACAATTCCTGAGTTGATGAGGGTATCTAGAGATGGAGTTATCATATTTGCTGGTTATCCAGATTATCCAGTTTCAAAATTTACCAGATACAAATTCAAGCGCCAGGCCAAACTCCGAAGTCCTTCGTGGTGGAAAAGGTATTTAGTTCAAAGGAAGTTGGAAGAGAATGAAGCTGCTAAAAAGAGGTTTAAGAAAATTTTACGGGATATCTCATATAAACCAGCCTGCCAAATCTTTTTTCTCAAGTCAGGATGA

Coding sequence (CDS)

ATGGCAGGTCATACCTTTTGCACTTCGGAAGTTCAAACAATAATACCACTTCTAAGGGAAGTATATGATGATAGCATGACCAAAGTGTTATACGTTGGCCCCGATTCTTGTTCGATGATGTCTGAATTACTCATAGACGAAGAGGATTATGAAGCTTGGGGTGTGGAACCATATGGCTCTGATGCTAGTGACTTGTATTGTTGGGATCTCATCCATAAAGGCATCATTCGTGTTGCCGATATGAAATATTCTCTGCCTTATAGGGAAAAGTCATTTTCTCATGTTATAATTTCAGATACTTTGGAATATTTCTCTTCACGATACCTTAACAACACAATTCCTGAGTTGATGAGGGTATCTAGAGATGGAGTTATCATATTTGCTGGTTATCCAGATTATCCAGTTTCAAAATTTACCAGATACAAATTCAAGCGCCAGGCCAAACTCCGAAGTCCTTCGTGGTGGAAAAGGTATTTAGTTCAAAGGAAGTTGGAAGAGAATGAAGCTGCTAAAAAGAGGTTTAAGAAAATTTTACGGGATATCTCATATAAACCAGCCTGCCAAATCTTTTTTCTCAAGTCAGGATGA

Protein sequence

MAGHTFCTSEVQTIIPLLREVYDDSMTKVLYVGPDSCSMMSELLIDEEDYEAWGVEPYGSDASDLYCWDLIHKGIIRVADMKYSLPYREKSFSHVIISDTLEYFSSRYLNNTIPELMRVSRDGVIIFAGYPDYPVSKFTRYKFKRQAKLRSPSWWKRYLVQRKLEENEAAKKRFKKILRDISYKPACQIFFLKSG

Homology

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BLAST of HG10019192 vs. NCBI nr
Match: XP_038905892.1 (probable pectin methylesterase CGR3 [Benincasa hispida])

HSP 1 Score: 373.2 bits (957), Expect = 1.3e-99
Identity = 176/193 (91.19%), Postives = 186/193 (96.37%), Query Frame = 0


Query: 3   GHTFCTSEVQTIIPLLREVYDDSMTKVLYVGPDSCSMMSELLIDEEDYEAWGVEPYGSDA 62
           G TFC+ EVQT+IPLLREVYDDSMTKVLYVGPD+CSMMSELLIDEE+YEAWGVEPYGSD 
Sbjct: 79  GQTFCSLEVQTMIPLLREVYDDSMTKVLYVGPDTCSMMSELLIDEEEYEAWGVEPYGSDG 138

Query: 63  SDLYCWDLIHKGIIRVADMKYSLPYREKSFSHVIISDTLEYFSSRYLNNTIPELMRVSRD 122
           SD YCWDLIHKGIIRVADMK+SLPYRE SFSHVIISDTLEYFS RYLN+TIPELMRVSRD
Sbjct: 139 SDFYCWDLIHKGIIRVADMKFSLPYRENSFSHVIISDTLEYFSPRYLNSTIPELMRVSRD 198

Query: 123 GVIIFAGYPDYPVSKFTRYKFKRQAKLRSPSWWKRYLVQRKLEENEAAKKRFKKILRDIS 182
           GVIIFAGYPDYP+++FTRYKF R+AKLRSPSWWKRYLVQRKLEENEAAKKRFKKILRDIS
Sbjct: 199 GVIIFAGYPDYPITEFTRYKFNREAKLRSPSWWKRYLVQRKLEENEAAKKRFKKILRDIS 258

Query: 183 YKPACQIFFLKSG 196
           YKPACQIFFLKSG
Sbjct: 259 YKPACQIFFLKSG 271

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BLAST of HG10019192 vs. NCBI nr
Match: XP_008454502.1 (PREDICTED: uncharacterized protein At3g49720-like [Cucumis melo])

HSP 1 Score: 344.7 bits (883), Expect = 5.1e-91
Identity = 164/194 (84.54%), Postives = 183/194 (94.33%), Query Frame = 0


Query: 3   GHTFCTSEVQTIIPLLREVYDDSMTKVLYVGPDSCSMMSELLI-DEEDYEAWGVEPYGSD 62
           GHTFCTSEVQT IPLLREVYDDSMTKVLYVGPD+CSM+S+LLI DE+DYEAWG+EPYGSD
Sbjct: 81  GHTFCTSEVQTTIPLLREVYDDSMTKVLYVGPDTCSMISKLLIDDEDDYEAWGLEPYGSD 140

Query: 63  ASDLYCWDLIHKGIIRVADMKYSLPYREKSFSHVIISDTLEYFSSRYLNNTIPELMRVSR 122
           +S   CWDLIHKGIIRVAD+K++LPY E SFSHVIISDTLEYFSSRYLN+TI ELMRVSR
Sbjct: 141 SSYFNCWDLIHKGIIRVADVKFALPYGENSFSHVIISDTLEYFSSRYLNSTIFELMRVSR 200

Query: 123 DGVIIFAGYPDYPVSKFTRYKFKRQAKLRSPSWWKRYLVQRKLEENEAAKKRFKKILRDI 182
           +GVIIFAGYPDYP+S+FTR+KF RQAKLRSPSWWKRYL Q++LEENE A+KRFKKILR+I
Sbjct: 201 EGVIIFAGYPDYPISEFTRFKFDRQAKLRSPSWWKRYLNQKELEENEVARKRFKKILREI 260

Query: 183 SYKPACQIFFLKSG 196
           SYKPACQI+FLKSG
Sbjct: 261 SYKPACQIYFLKSG 274

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BLAST of HG10019192 vs. NCBI nr
Match: XP_011654354.1 (probable pectin methylesterase CGR3 [Cucumis sativus])

HSP 1 Score: 339.3 bits (869), Expect = 2.1e-89
Identity = 161/194 (82.99%), Postives = 180/194 (92.78%), Query Frame = 0


Query: 3   GHTFCTSEVQTIIPLLREVYDDSMTKVLYVGPDSCSMMSELLI-DEEDYEAWGVEPYGSD 62
           GHTFCTSEVQT IPLLREVYDD+MTKVLYVGPD+CSM+S+LLI DE+DYEAWGVEPY  D
Sbjct: 81  GHTFCTSEVQTTIPLLREVYDDTMTKVLYVGPDTCSMISKLLIVDEDDYEAWGVEPYDFD 140

Query: 63  ASDLYCWDLIHKGIIRVADMKYSLPYREKSFSHVIISDTLEYFSSRYLNNTIPELMRVSR 122
           +S  +CWDLIHKGIIRVAD+K+ LPY + SFSHVIISDTLEYFSSRYLN+TI ELMRVSR
Sbjct: 141 SSYFHCWDLIHKGIIRVADVKFDLPYEKNSFSHVIISDTLEYFSSRYLNSTIFELMRVSR 200

Query: 123 DGVIIFAGYPDYPVSKFTRYKFKRQAKLRSPSWWKRYLVQRKLEENEAAKKRFKKILRDI 182
           +GVIIFAG+PDYPVS+FTRYKF  +AKLRSPSWWKRYL Q+ LEENEAA+KRFKKILR+I
Sbjct: 201 EGVIIFAGHPDYPVSEFTRYKFDHEAKLRSPSWWKRYLSQKNLEENEAARKRFKKILREI 260

Query: 183 SYKPACQIFFLKSG 196
           SYKPACQ+FFLKSG
Sbjct: 261 SYKPACQVFFLKSG 274

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BLAST of HG10019192 vs. NCBI nr
Match: KAE8649381.1 (hypothetical protein Csa_011838 [Cucumis sativus])

HSP 1 Score: 339.3 bits (869), Expect = 2.1e-89
Identity = 161/194 (82.99%), Postives = 180/194 (92.78%), Query Frame = 0


Query: 3   GHTFCTSEVQTIIPLLREVYDDSMTKVLYVGPDSCSMMSELLI-DEEDYEAWGVEPYGSD 62
           GHTFCTSEVQT IPLLREVYDD+MTKVLYVGPD+CSM+S+LLI DE+DYEAWGVEPY  D
Sbjct: 9   GHTFCTSEVQTTIPLLREVYDDTMTKVLYVGPDTCSMISKLLIVDEDDYEAWGVEPYDFD 68

Query: 63  ASDLYCWDLIHKGIIRVADMKYSLPYREKSFSHVIISDTLEYFSSRYLNNTIPELMRVSR 122
           +S  +CWDLIHKGIIRVAD+K+ LPY + SFSHVIISDTLEYFSSRYLN+TI ELMRVSR
Sbjct: 69  SSYFHCWDLIHKGIIRVADVKFDLPYEKNSFSHVIISDTLEYFSSRYLNSTIFELMRVSR 128

Query: 123 DGVIIFAGYPDYPVSKFTRYKFKRQAKLRSPSWWKRYLVQRKLEENEAAKKRFKKILRDI 182
           +GVIIFAG+PDYPVS+FTRYKF  +AKLRSPSWWKRYL Q+ LEENEAA+KRFKKILR+I
Sbjct: 129 EGVIIFAGHPDYPVSEFTRYKFDHEAKLRSPSWWKRYLSQKNLEENEAARKRFKKILREI 188

Query: 183 SYKPACQIFFLKSG 196
           SYKPACQ+FFLKSG
Sbjct: 189 SYKPACQVFFLKSG 202

[Close]

BLAST of HG10019192 vs. NCBI nr
Match: XP_022996876.1 (uncharacterized protein At3g49720-like [Cucurbita maxima] >XP_022996886.1 uncharacterized protein At3g49720-like [Cucurbita maxima] >XP_022996895.1 uncharacterized protein At3g49720-like [Cucurbita maxima] >XP_022996905.1 uncharacterized protein At3g49720-like [Cucurbita maxima] >XP_022996912.1 uncharacterized protein At3g49720-like [Cucurbita maxima] >XP_022996921.1 uncharacterized protein At3g49720-like [Cucurbita maxima])

HSP 1 Score: 291.6 bits (745), Expect = 5.1e-75
Identity = 134/192 (69.79%), Postives = 162/192 (84.38%), Query Frame = 0


Query: 3   GHTFCTSEVQTIIPLLREVYDDSMTKVLYVGPDSCSMMSELLIDEEDYEAWGVEPYGSDA 62
           GHTFCTSEVQTII LL+EVYD +M KVLYVGPD+ S+M ELL D++DY  WG++PY +D 
Sbjct: 74  GHTFCTSEVQTIITLLKEVYDYNMNKVLYVGPDTGSVMPELLEDKDDYVDWGMDPYDTDG 133

Query: 63  SDLYCWDLIHKGIIRVADMKYSLPYREKSFSHVIISDTLEYFSSRYLNNTIPELMRVSRD 122
           +D  CWDLI + I+ V+DMK+ LPYREKSFSHVI+SDTLEY SSRYLN TIPE MRVSRD
Sbjct: 134 ADSCCWDLIEREIVHVSDMKFPLPYREKSFSHVIVSDTLEYMSSRYLNETIPEFMRVSRD 193

Query: 123 GVIIFAGYPDYPVSKFTRYKFKRQAKLRSPSWWKRYLVQRKLEENEAAKKRFKKILRDIS 182
           G++IFAG+PD+PVSKF R ++ RQAKLRSPSWWK YL QRK +E+ AAK+R   +L+DIS
Sbjct: 194 GIVIFAGHPDFPVSKFNRSRYNRQAKLRSPSWWKMYLAQRKFKEDAAAKERLNNMLKDIS 253

Query: 183 YKPACQIFFLKS 195
           ++PACQIF LKS
Sbjct: 254 FEPACQIFLLKS 265

[Close]

BLAST of HG10019192 vs. ExPASy Swiss-Prot
Match: Q0WPN7 (Probable pectin methylesterase CGR3 OS=Arabidopsis thaliana OX=3702 GN=CGR3 PE=2 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 4.2e-56
Identity = 108/194 (55.67%), Postives = 139/194 (71.65%), Query Frame = 0


Query: 1   MAGHTFCTSEVQTIIPLLREVYDDSMTKVLYVGPDSCSMMSELLIDEEDYEAWGVEPYGS 60
           + G   CT+EVQ  IP+L+  Y DSM KVL+VGP++CS++S LL +EE+ EAWGVEPY  
Sbjct: 63  ITGDYSCTAEVQRAIPILKSAYGDSMRKVLHVGPETCSVVSSLL-NEEETEAWGVEPYDV 122

Query: 61  DASDLYCWDLIHKGIIRVADMKYSLPYREKSFSHVIISDTLEYFSSRYLNNTIPELMRVS 120
           + +D  C  L+HKG++RVAD+K+ LPYR KSFS VI+SD L+Y S RYLN T+PEL RV+
Sbjct: 123 EDADSNCKSLLHKGLVRVADIKFPLPYRSKSFSLVIVSDALDYLSPRYLNKTVPELARVA 182

Query: 121 RDGVIIFAGYPDYPVSKFTRY-KFKRQAKLRSPSWWKRYLVQRKLEENEAAKKRFKKILR 180
            DGV++ AG P    +K     KF R AK+RS SWW R+  Q  LEENEAA K+F++   
Sbjct: 183 SDGVVLLAGNPGQQKAKGGELSKFGRPAKMRSSSWWIRFFSQTNLEENEAASKKFEQAAS 242

Query: 181 DISYKPACQIFFLK 194
             SYKPACQ+F LK
Sbjct: 243 KSSYKPACQVFHLK 255

[Close]

BLAST of HG10019192 vs. ExPASy Swiss-Prot
Match: Q9M2Y6 (Probable pectin methylesterase CGR2 OS=Arabidopsis thaliana OX=3702 GN=CGR2 PE=2 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 4.7e-55
Identity = 104/194 (53.61%), Postives = 138/194 (71.13%), Query Frame = 0


Query: 1   MAGHTFCTSEVQTIIPLLREVYDDSMTKVLYVGPDSCSMMSELLIDEEDYEAWGVEPYGS 60
           + G   CT+EVQ  IP+L++ Y D M KVL+VGPD+CS++S LL  EE+ EAWGVEPY  
Sbjct: 66  VTGDYSCTAEVQRAIPVLKKAYGDGMRKVLHVGPDTCSVVSSLL-KEEETEAWGVEPYDI 125

Query: 61  DASDLYCWDLIHKGIIRVADMKYSLPYREKSFSHVIISDTLEYFSSRYLNNTIPELMRVS 120
           + +D +C   + KG++RVAD+K+ LPYR KSFS VI+SD L+Y S +YLN T+PEL RV+
Sbjct: 126 EDADSHCKSFVSKGLVRVADIKFPLPYRAKSFSLVIVSDALDYLSPKYLNKTVPELARVA 185

Query: 121 RDGVIIFAGYPDYPVSKFTRY-KFKRQAKLRSPSWWKRYLVQRKLEENEAAKKRFKKILR 180
            DGV++FAG P    +K     KF R AK+RS SWW R+ VQ  LEEN+A  K+F++ + 
Sbjct: 186 SDGVVLFAGLPGQQRAKVAELSKFGRPAKMRSASWWNRFFVQTNLEENDAPSKKFEQAVS 245

Query: 181 DISYKPACQIFFLK 194
              YKPACQ+F LK
Sbjct: 246 KGLYKPACQVFHLK 258

[Close]

BLAST of HG10019192 vs. ExPASy TrEMBL
Match: A0A1S3BYV5 (uncharacterized protein At3g49720-like OS=Cucumis melo OX=3656 GN=LOC103494900 PE=4 SV=1)

HSP 1 Score: 344.7 bits (883), Expect = 2.5e-91
Identity = 164/194 (84.54%), Postives = 183/194 (94.33%), Query Frame = 0


Query: 3   GHTFCTSEVQTIIPLLREVYDDSMTKVLYVGPDSCSMMSELLI-DEEDYEAWGVEPYGSD 62
           GHTFCTSEVQT IPLLREVYDDSMTKVLYVGPD+CSM+S+LLI DE+DYEAWG+EPYGSD
Sbjct: 81  GHTFCTSEVQTTIPLLREVYDDSMTKVLYVGPDTCSMISKLLIDDEDDYEAWGLEPYGSD 140

Query: 63  ASDLYCWDLIHKGIIRVADMKYSLPYREKSFSHVIISDTLEYFSSRYLNNTIPELMRVSR 122
           +S   CWDLIHKGIIRVAD+K++LPY E SFSHVIISDTLEYFSSRYLN+TI ELMRVSR
Sbjct: 141 SSYFNCWDLIHKGIIRVADVKFALPYGENSFSHVIISDTLEYFSSRYLNSTIFELMRVSR 200

Query: 123 DGVIIFAGYPDYPVSKFTRYKFKRQAKLRSPSWWKRYLVQRKLEENEAAKKRFKKILRDI 182
           +GVIIFAGYPDYP+S+FTR+KF RQAKLRSPSWWKRYL Q++LEENE A+KRFKKILR+I
Sbjct: 201 EGVIIFAGYPDYPISEFTRFKFDRQAKLRSPSWWKRYLNQKELEENEVARKRFKKILREI 260

Query: 183 SYKPACQIFFLKSG 196
           SYKPACQI+FLKSG
Sbjct: 261 SYKPACQIYFLKSG 274

[Close]

BLAST of HG10019192 vs. ExPASy TrEMBL
Match: A0A6J1K5Y9 (uncharacterized protein At3g49720-like OS=Cucurbita maxima OX=3661 GN=LOC111491988 PE=4 SV=1)

HSP 1 Score: 291.6 bits (745), Expect = 2.5e-75
Identity = 134/192 (69.79%), Postives = 162/192 (84.38%), Query Frame = 0


Query: 3   GHTFCTSEVQTIIPLLREVYDDSMTKVLYVGPDSCSMMSELLIDEEDYEAWGVEPYGSDA 62
           GHTFCTSEVQTII LL+EVYD +M KVLYVGPD+ S+M ELL D++DY  WG++PY +D 
Sbjct: 74  GHTFCTSEVQTIITLLKEVYDYNMNKVLYVGPDTGSVMPELLEDKDDYVDWGMDPYDTDG 133

Query: 63  SDLYCWDLIHKGIIRVADMKYSLPYREKSFSHVIISDTLEYFSSRYLNNTIPELMRVSRD 122
           +D  CWDLI + I+ V+DMK+ LPYREKSFSHVI+SDTLEY SSRYLN TIPE MRVSRD
Sbjct: 134 ADSCCWDLIEREIVHVSDMKFPLPYREKSFSHVIVSDTLEYMSSRYLNETIPEFMRVSRD 193

Query: 123 GVIIFAGYPDYPVSKFTRYKFKRQAKLRSPSWWKRYLVQRKLEENEAAKKRFKKILRDIS 182
           G++IFAG+PD+PVSKF R ++ RQAKLRSPSWWK YL QRK +E+ AAK+R   +L+DIS
Sbjct: 194 GIVIFAGHPDFPVSKFNRSRYNRQAKLRSPSWWKMYLAQRKFKEDAAAKERLNNMLKDIS 253

Query: 183 YKPACQIFFLKS 195
           ++PACQIF LKS
Sbjct: 254 FEPACQIFLLKS 265

[Close]

BLAST of HG10019192 vs. ExPASy TrEMBL
Match: A0A6J1D594 (uncharacterized protein At3g49720-like OS=Momordica charantia OX=3673 GN=LOC111017728 PE=4 SV=1)

HSP 1 Score: 290.8 bits (743), Expect = 4.2e-75
Identity = 139/192 (72.40%), Postives = 163/192 (84.90%), Query Frame = 0


Query: 3   GHTFCTSEVQTIIPLLREVYDDSMTKVLYVGPDSCSMMSELLIDEEDYEAWGVEPYGSDA 62
           GH FCT EV+  +PLLREVYDD M KVLYVGPD+CS++S  L DEEDYEAWGV+P+G DA
Sbjct: 80  GHGFCTPEVEITMPLLREVYDDIMNKVLYVGPDTCSLVSGFL-DEEDYEAWGVDPFGFDA 139

Query: 63  SDLYCWDLIHKGIIRVADMKYSLPYREKSFSHVIISDTLEYFSSRYLNNTIPELMRVSRD 122
           +D  C DL+ +GI+RVAD+K+ LPYR+ SFSHV++SDTLEY SSRYLN+T+ EL RVS +
Sbjct: 140 NDSDCRDLVQQGIVRVADIKFPLPYRDSSFSHVVVSDTLEYLSSRYLNSTLAELTRVSSE 199

Query: 123 GVIIFAGYPDYPVSKFTRYKFKRQAKLRSPSWWKRYLVQRKLEENEAAKKRFKKILRDIS 182
           GVII+AGYP +PVS+FTRY   RQAK RSPSWW+RYLVQRKLEEN AAKKR KKIL+DIS
Sbjct: 200 GVIIYAGYPGFPVSEFTRY--SRQAKFRSPSWWRRYLVQRKLEENVAAKKRLKKILKDIS 259

Query: 183 YKPACQIFFLKS 195
           YKPACQI  LKS
Sbjct: 260 YKPACQILLLKS 268

[Close]

BLAST of HG10019192 vs. ExPASy TrEMBL
Match: A0A6J1FVH2 (uncharacterized protein At3g49720-like OS=Cucurbita moschata OX=3662 GN=LOC111447239 PE=4 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 3.9e-73
Identity = 130/192 (67.71%), Postives = 159/192 (82.81%), Query Frame = 0


Query: 3   GHTFCTSEVQTIIPLLREVYDDSMTKVLYVGPDSCSMMSELLIDEEDYEAWGVEPYGSDA 62
           G TFCTSEVQT I LL+EVYD +M KVLYVGPD+ S+M ELL D++DY  WG++PY ++ 
Sbjct: 74  GDTFCTSEVQTTITLLKEVYDYNMNKVLYVGPDTGSVMPELLEDKDDYVDWGMDPYDTEG 133

Query: 63  SDLYCWDLIHKGIIRVADMKYSLPYREKSFSHVIISDTLEYFSSRYLNNTIPELMRVSRD 122
           +D  CWDLI + I+ V+DMK+ LPYREKSFSHVI+SDTLEY SSRYLN TIPE MRVSRD
Sbjct: 134 ADSCCWDLIEREIVHVSDMKFPLPYREKSFSHVIVSDTLEYMSSRYLNETIPEFMRVSRD 193

Query: 123 GVIIFAGYPDYPVSKFTRYKFKRQAKLRSPSWWKRYLVQRKLEENEAAKKRFKKILRDIS 182
           G++IFAG+PD+P+SKF R ++ RQAKLRSPSWWK YL QRK EE+ AAK+R   +L+DIS
Sbjct: 194 GIVIFAGHPDFPISKFNRSRYNRQAKLRSPSWWKMYLAQRKFEEDAAAKERLNNMLKDIS 253

Query: 183 YKPACQIFFLKS 195
           ++P CQIF LKS
Sbjct: 254 FEPVCQIFLLKS 265

[Close]

BLAST of HG10019192 vs. ExPASy TrEMBL
Match: A0A5D3E063 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G00250 PE=4 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 7.2e-67
Identity = 124/150 (82.67%), Postives = 140/150 (93.33%), Query Frame = 0


Query: 1   MAGHTFCTSEVQTIIPLLREVYDDSMTKVLYVGPDSCSMMSELLI-DEEDYEAWGVEPYG 60
           MAGHTFCTSEVQT IPLLREVYDDSMTKVLYVGPD+CSM+S+LLI DE+DYEAWG+EPYG
Sbjct: 1   MAGHTFCTSEVQTTIPLLREVYDDSMTKVLYVGPDTCSMISKLLIDDEDDYEAWGLEPYG 60

Query: 61  SDASDLYCWDLIHKGIIRVADMKYSLPYREKSFSHVIISDTLEYFSSRYLNNTIPELMRV 120
           SD+S   CWDLIHKGIIRVAD+K++LPY E SFSHVIISDTLEYFSSRYLN+TI ELMRV
Sbjct: 61  SDSSYFNCWDLIHKGIIRVADVKFALPYGENSFSHVIISDTLEYFSSRYLNSTIFELMRV 120

Query: 121 SRDGVIIFAGYPDYPVSKFTRYKFKRQAKL 150
           SR+GVIIFAGYPDYP+S+FTR+KF RQ ++
Sbjct: 121 SREGVIIFAGYPDYPISEFTRFKFDRQVRI 150

[Close]

BLAST of HG10019192 vs. TAIR 10
Match: AT5G65810.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G49720.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 219.2 bits (557), Expect = 3.0e-57
Identity = 108/194 (55.67%), Postives = 139/194 (71.65%), Query Frame = 0


Query: 1   MAGHTFCTSEVQTIIPLLREVYDDSMTKVLYVGPDSCSMMSELLIDEEDYEAWGVEPYGS 60
           + G   CT+EVQ  IP+L+  Y DSM KVL+VGP++CS++S LL +EE+ EAWGVEPY  
Sbjct: 63  ITGDYSCTAEVQRAIPILKSAYGDSMRKVLHVGPETCSVVSSLL-NEEETEAWGVEPYDV 122

Query: 61  DASDLYCWDLIHKGIIRVADMKYSLPYREKSFSHVIISDTLEYFSSRYLNNTIPELMRVS 120
           + +D  C  L+HKG++RVAD+K+ LPYR KSFS VI+SD L+Y S RYLN T+PEL RV+
Sbjct: 123 EDADSNCKSLLHKGLVRVADIKFPLPYRSKSFSLVIVSDALDYLSPRYLNKTVPELARVA 182

Query: 121 RDGVIIFAGYPDYPVSKFTRY-KFKRQAKLRSPSWWKRYLVQRKLEENEAAKKRFKKILR 180
            DGV++ AG P    +K     KF R AK+RS SWW R+  Q  LEENEAA K+F++   
Sbjct: 183 SDGVVLLAGNPGQQKAKGGELSKFGRPAKMRSSSWWIRFFSQTNLEENEAASKKFEQAAS 242

Query: 181 DISYKPACQIFFLK 194
             SYKPACQ+F LK
Sbjct: 243 KSSYKPACQVFHLK 255

[Close]

BLAST of HG10019192 vs. TAIR 10
Match: AT3G49720.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, Golgi apparatus, plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G65810.1); Has 64 Blast hits to 64 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 215.7 bits (548), Expect = 3.3e-56
Identity = 104/194 (53.61%), Postives = 138/194 (71.13%), Query Frame = 0


Query: 1   MAGHTFCTSEVQTIIPLLREVYDDSMTKVLYVGPDSCSMMSELLIDEEDYEAWGVEPYGS 60
           + G   CT+EVQ  IP+L++ Y D M KVL+VGPD+CS++S LL  EE+ EAWGVEPY  
Sbjct: 66  VTGDYSCTAEVQRAIPVLKKAYGDGMRKVLHVGPDTCSVVSSLL-KEEETEAWGVEPYDI 125

Query: 61  DASDLYCWDLIHKGIIRVADMKYSLPYREKSFSHVIISDTLEYFSSRYLNNTIPELMRVS 120
           + +D +C   + KG++RVAD+K+ LPYR KSFS VI+SD L+Y S +YLN T+PEL RV+
Sbjct: 126 EDADSHCKSFVSKGLVRVADIKFPLPYRAKSFSLVIVSDALDYLSPKYLNKTVPELARVA 185

Query: 121 RDGVIIFAGYPDYPVSKFTRY-KFKRQAKLRSPSWWKRYLVQRKLEENEAAKKRFKKILR 180
            DGV++FAG P    +K     KF R AK+RS SWW R+ VQ  LEEN+A  K+F++ + 
Sbjct: 186 SDGVVLFAGLPGQQRAKVAELSKFGRPAKMRSASWWNRFFVQTNLEENDAPSKKFEQAVS 245

Query: 181 DISYKPACQIFFLK 194
              YKPACQ+F LK
Sbjct: 246 KGLYKPACQVFHLK 258

[Close]

BLAST of HG10019192 vs. TAIR 10
Match: AT3G49720.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, Golgi apparatus, plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G65810.1); Has 64 Blast hits to 64 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 215.7 bits (548), Expect = 3.3e-56
Identity = 104/194 (53.61%), Postives = 138/194 (71.13%), Query Frame = 0


Query: 1   MAGHTFCTSEVQTIIPLLREVYDDSMTKVLYVGPDSCSMMSELLIDEEDYEAWGVEPYGS 60
           + G   CT+EVQ  IP+L++ Y D M KVL+VGPD+CS++S LL  EE+ EAWGVEPY  
Sbjct: 66  VTGDYSCTAEVQRAIPVLKKAYGDGMRKVLHVGPDTCSVVSSLL-KEEETEAWGVEPYDI 125

Query: 61  DASDLYCWDLIHKGIIRVADMKYSLPYREKSFSHVIISDTLEYFSSRYLNNTIPELMRVS 120
           + +D +C   + KG++RVAD+K+ LPYR KSFS VI+SD L+Y S +YLN T+PEL RV+
Sbjct: 126 EDADSHCKSFVSKGLVRVADIKFPLPYRAKSFSLVIVSDALDYLSPKYLNKTVPELARVA 185

Query: 121 RDGVIIFAGYPDYPVSKFTRY-KFKRQAKLRSPSWWKRYLVQRKLEENEAAKKRFKKILR 180
            DGV++FAG P    +K     KF R AK+RS SWW R+ VQ  LEEN+A  K+F++ + 
Sbjct: 186 SDGVVLFAGLPGQQRAKVAELSKFGRPAKMRSASWWNRFFVQTNLEENDAPSKKFEQAVS 245

Query: 181 DISYKPACQIFFLK 194
              YKPACQ+F LK
Sbjct: 246 KGLYKPACQVFHLK 258

The following BLAST results are available for this feature:

BLAST of HG10019192 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038905892.1	1.3e-99	91.19	probable pectin methylesterase CGR3 [Benincasa hispida]	[more]
XP_008454502.1	5.1e-91	84.54	PREDICTED: uncharacterized protein At3g49720-like [Cucumis melo]	[more]
XP_011654354.1	2.1e-89	82.99	probable pectin methylesterase CGR3 [Cucumis sativus]	[more]
KAE8649381.1	2.1e-89	82.99	hypothetical protein Csa_011838 [Cucumis sativus]	[more]
XP_022996876.1	5.1e-75	69.79	uncharacterized protein At3g49720-like [Cucurbita maxima] >XP_022996886.1 unchar...	[more]

BLAST of HG10019192 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q0WPN7	4.2e-56	55.67	Probable pectin methylesterase CGR3 OS=Arabidopsis thaliana OX=3702 GN=CGR3 PE=2...	[more]
Q9M2Y6	4.7e-55	53.61	Probable pectin methylesterase CGR2 OS=Arabidopsis thaliana OX=3702 GN=CGR2 PE=2...	[more]

BLAST of HG10019192 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BYV5	2.5e-91	84.54	uncharacterized protein At3g49720-like OS=Cucumis melo OX=3656 GN=LOC103494900 P...	[more]
A0A6J1K5Y9	2.5e-75	69.79	uncharacterized protein At3g49720-like OS=Cucurbita maxima OX=3661 GN=LOC1114919...	[more]
A0A6J1D594	4.2e-75	72.40	uncharacterized protein At3g49720-like OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A6J1FVH2	3.9e-73	67.71	uncharacterized protein At3g49720-like OS=Cucurbita moschata OX=3662 GN=LOC11144...	[more]
A0A5D3E063	7.2e-67	82.67	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of HG10019192 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G65810.1	3.0e-57	55.67	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G49720.1	3.3e-56	53.61	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G49720.2	3.3e-56	53.61	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 160..180
None	No IPR available	GENE3D	3.40.50.150	Vaccinia Virus protein VP39	coord: 7..188 e-value: 8.1E-8 score: 33.9
None	No IPR available	PANTHER	PTHR34208:SF10	PECTIN METHYLESTERASE CGR3-RELATED	coord: 3..194
IPR044689	Pectin methyltransferase CGR2/3	PANTHER	PTHR34208	S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE-RELATED	coord: 3..194
IPR029063	S-adenosyl-L-methionine-dependent methyltransferase	SUPERFAMILY	53335	S-adenosyl-L-methionine-dependent methyltransferases	coord: 75..163

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10019192.1	HG10019192.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045488	pectin metabolic process
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0008168	methyltransferase activity