HG10019143 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10019143
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
LocationChr04: 17538209 .. 17538397 (+)
RNA-Seq ExpressionHG10019143
SyntenyHG10019143
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGGTGGTTGCCGGAGTTGGCTGTCAGAGGTGGTCGCTGGAGTTGGCAGCAACAATGGTGGTTGAATGTTGCCGGAGTTGGCTGCATGCAGTGGTCGCCGGAGTTGGTTGTCGGAGGTGGTCGCCGGAGTTGGGCATCGCATGTGGTTGCCGAAGTTGGTCGTAGGAGGTGGTCACTGGTAATGTGA

mRNA sequence

ATGTGGTGGTTGCCGGAGTTGGCTGTCAGAGGTGGTCGCTGGAGTTGGCAGCAACAATGGTGGTTGAATGTTGCCGGAGTTGGCTGCATGCAGTGGTCGCCGGAGTTGGTTGTCGGAGGTGGTCGCCGGAGTTGGGCATCGCATGTGGTTGCCGAAGTTGGTCGTAGGAGGTGGTCACTGGTAATGTGA

Coding sequence (CDS)

ATGTGGTGGTTGCCGGAGTTGGCTGTCAGAGGTGGTCGCTGGAGTTGGCAGCAACAATGGTGGTTGAATGTTGCCGGAGTTGGCTGCATGCAGTGGTCGCCGGAGTTGGTTGTCGGAGGTGGTCGCCGGAGTTGGGCATCGCATGTGGTTGCCGAAGTTGGTCGTAGGAGGTGGTCACTGGTAATGTGA

Protein sequence

MWWLPELAVRGGRWSWQQQWWLNVAGVGCMQWSPELVVGGGRRSWASHVVAEVGRRRWSLVM
Homology
[Close]
BLAST of HG10019143 vs. NCBI nr
Match: XP_010501877.1 (PREDICTED: uncharacterized protein LOC104779199 [Camelina sativa] >XP_010501878.1 PREDICTED: uncharacterized protein LOC104779200 [Camelina sativa])

HSP 1 Score: 55.1 bits (131), Expect = 2.5e-04
Identity = 29/54 (53.70%), Postives = 32/54 (59.26%), Query Frame = 0 

Query: 4  LPELAVRGGRWSWQQQWWLNVAGVGCMQWSPELVVGGGRRSWASHVVAEVGRRR 58
          LPEL   GGR SW       VAGVG   WSP +V G GRR W+  +VA  GRRR
Sbjct: 25 LPELVAGGGRRSWSP---AVVAGVGRRSWSPAMVAGVGRRRWSPELVAGDGRRR 75

The following BLAST results are available for this feature:
BLAST of HG10019143 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_010501877.12.5e-0453.70PREDICTED: uncharacterized protein LOC104779199 [Camelina sativa] >XP_010501878.... [more]
BLAST of HG10019143 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of HG10019143 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of HG10019143 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10019143.1HG10019143.1mRNA