HG10019067 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10019067
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionDisease resistance protein RGA2-like
LocationChr04: 15550614 .. 15558324 (+)
RNA-Seq ExpressionHG10019067
SyntenyHG10019067
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTAACAATGCTGAGAATCCTTCTTATTCCTCAAACCCTAATGTTCATGTGAATCCTTCTGTGATTCGAGCGGTGACTTTATCTACTGTGAATCCTTCTTCTGGTTCGTCTTTTCAATCGATGAATTCTATTATTCTTGAGCAATATGCTAATCCATATTTTCTTCACCACTCCTATTTATCTTGAATAGCATTATGCTAAGAAGGATTAGCATTCCCATTTCCACGAGATCTTCATTGCTATGACTCTGGCAAGGATCATCGTACTATAGGAGTGGTGAAGAAAATATGGATTAGCATATTGCTCAAGAACAATAGGATTCATTGATGACTTTATCTTGAGCAATTCTCCTATTTTATAATCTCAACCGGTTGTAGTTGTACGATGATCCTTGCTAGAGTCATAGCAATGAAAGCTAACAATGTTAATCTTTATTCATTGCTTGTGGGAACTGCTCTTGAAAGATGAGAGGGAATGAGGAAGGAGAATTTTCAAAGAACCTTTCTCTAAAGATTAGGAGAGTTTTTTTTGGAGAGAATCTCTACAAAATAGCTTAAGAGGATTGAGTTGTAGTAATGTGTTCCATGAGGGCTCCCTAGGGCCCTATTTATAGAACTCTACAAGGTAACTCCTAATCTTATTACAATAACCTATCTGCAAAGATTTTAAATTAATTATCTATTAATATCCAACATTAAAAGACAATTACCCATTTAATATTTCATATTAAAAGATTTTAAATATTTAAATCATATTTAAATTTTTATTCTATGTAGTATCTCTTTAATTTAAATCTCATTCAAATTAAATAATTAATTAGTTGAAATATATTCAAATAAATTAATTCTCTCATTATTTATTTAATTAGAATCTCAATCAAATTAAATAATTTATTTATTTAAATCTCATTGAAATAAATTAATTCTCCATATTATAAAATTATAATTTGAATCTTAGTCAAATAAACTTTATAATAAAATATGTATTTAATGGTATCAATACAATTAATATTTTCCCTCATAAAATTTGAACGTTTCAAATTTTCTTTCAATATATTTTATCCTTGTTGGTCCATGATGAGCTAGCAAGGGGACCCTATAGACCTACAGATTATAAGCTTCAATGATTCAAGATTAATTAATTAAACTCTTTAATTAAATTAACCTTCATTCATTAACTATAGGGCAAACCACTATAGACCCATAGTTGAACTTGTATATATGCATTGTAGCAAGTTGTATCCATGGATATAATCGATATAATCAAGTTGATCCTTCACGAGTTGTCCATAAATAATAGTTACTAAAATAACTTAGTTTAACTAGCATAAGTATATGCGAGCGATCAAGAGATATGTGGTTCGAATCTCTACTCCTATTGCACTAAAATAATCATAAATAATAGTTTGCATATCATGGAAAATGTTAAACCATTTATAGAATTAATAACAAATACTTTAAAAGCTAACTTATGCTCAGTTTAATAGCCATTCAATTTTTATTTTTTATTTTTAAAATTGGGCTTATTTTTTAAAGGTTAAAAAACATTTTTGGTCCCTAGTCTTTCATGAAAGTAACAATTTAGTCCATGAACTTTAATTGATAATGATTTAGTTCCTATATTTTTAAGTTTATAACAATTGAGTCTATTCCCTACGCTTTACAATTAGAAACGGTTTATTTCCCATTCGTGATAACCCTGTTCATATGTTCACCAAGTCAGTTCCACATGACAAGTTTCAACATATTGCTTGGAATTGTTGAATGTTTTGAGTTGTTGATGGTTCTTTTTGGGACACTCTGAAACATGAGCAAAAAGTTTGGGTACATCTGACAATGTTTTGTATTTCATTCGGTAAATTTGTTATATATGAGAAAATTCTAGTCAAGGTGGAGTTTTGTTGGAATGTCTTAAATATGTTATTTAGCACTTCAAACAACTAAGTACAAGGGTCTCACTTACCGAAACCTTGTGGGAGTTTGGGGGGCAATGCCCCGAAAACCAAAGTTATATTCGTATTTATGTTATTTACGATCTTGACTTTAGAGGTTAGAGAACTGCTCTATATATAAACTCTTTAACTCTAGATGCACCTCTAATCTGTAATCTAAAATCATTTTCTCTAATAGTAAAATTTTTTCACTCTTCTTGTAGACATAACTAACATATTGTTAGTGAACAACGTAAATCTTTGTGTAAATTTTTGACTGTTTTACGTTTTTCCTTTTTTTTTATTTTTCGATTCCATAACAATCTTATTGTTAGTTATTTTATGTATTCGTCTTTTGTCACACACTTGATATTTACTTGGTGGAATTACAAGTTTCGTCCATAAATTTTTGAAGTTCATTGCATCTAAACGGTTGTATTTATCCTAATAGGCCCTTGAGTCTAATTTATTATATCAAATATATTTTTATGAATCTTGAATTTGATGTCTACAAAAAAAAATAAAAAATTAAACAACTACTACATACAAAAATTGAAAGTCTACAGTACACTTAAAAAATTTTAAGTTAGAGCTACCATTTAGGTTTATTTTCCCTTTATTTCTTTTATTATAATTTATTTCAAAACATAAAAGTAGCTTTTTAGCCATTCTTTTATTATAATTCTTCAAGACCATATATGTATGTAATGACAAAGTATTAGTTCACCTAACACCATTATCTGAGTGGATAGACCAAGACTTCATATTTTTATAAAATATAAGCTGAATTCATGAATCCTCCTTTACCTTGCAATATAATAATAACAAAAAATAAAATATTCAGTGTATTTTTTAGGTTTTTTTTTCCTCTTACTCAATTATCTATTATAATTTGACACATGATACTCTTCTCAATTGTTTAAAAAAATATTTTTAATTTTTTATAGTTAGAGTGAGATGTATAAATATAAGTCTACTATTTTGCATTTATAATAATTACACCATTTGTGAAAATAATAATAGTTACACTGATCCCTCATTTTTCATTATTGGCAGAATACATTGTCTTCAACCTTGCTGGAAACGTTATCATCAAATTGGGCTCTTTAGCATTCCAAGAGCTTGAGTTATGAGCTTCACAATCTGAAAAATATTATTTTATTCTTTTAAATCCATTGTATTGAAACTTTTATTTATTTATTTACTGAAGTGGTATTTTAAAGTCCTTTTTAAAGGTCCTTTATATTGATTTTATAAGGATATAAAAATAGGTTCTTTTTGGGTTGGTTTCAAATATAGAAAATCGAGTCAAACTATTTACAAATATAGAAAAATTTTACAATCTATCAGTGATAGACCGCGATAGAATTTATTTGCTTGAGCGATAGAAAGCGATAGAATTCTATAGCGGTCTATCACTGATAGACAGTTAAATTTTTCTATATTTGTAAATAGTTTGATATTTTTTCTGTTTAGAGTAATTTTATCTTTTTTTTTTTTTTTTTTATTAAAAACATACCTAAAAAGTTAATTCAAACCATTGTTCACATAGATGAGGACGATAATAAATTTGTATGAGATTTAGAAATACTTAATTAAACTGGCACCACCATTCTAAAAGAAGATAAGAAGCTCAAACAAAAAAGACATCTAATAAAACAACAATGGTAAAACTGCTAGAAATATTTTTAAATATAGTCAAATGTCACTGTCTATCATTAGATGTCTATCACTCATAGATGTCTATCAGTGTCTAGATAGTGATATTTTGTTATATTTGTGAATAAGTTGACTTATTTTGCTATATTTGAAAACAATTCTATTATTAATTGTAAAAAAAAAAAAAAAAAAAAAGAGCAATAAAACCCTCCAATTTTTAGGAGCCCTAAACTTCTACAAGTGTTAAAATTGGACTCTCAAGCTTACAGTATTATAGAAATTGGACCCACAAATGATAAAAAAAAATTGAACTCTTAACCTATACAAATGTTACAATTTAGGAAAATTTTTACAAATAGAAAAAATCTCAAACTATTTACAGAAAATAGCAAAAAACTCACTGATAGACATTGATGTCTATCAGCATCTATCAATGATAGATTTCTATCATTTCTATCACCGATAGACCCTGATAGACTTCTATCATCATCTATCCAACTATCTAAAAATTTTGCTATTTTGTGTAAATAGTTTTTTTTTTTTTTTTTAAAAAGTCCCTTACAAGTTATACAATTATATAAGTTTGAAAGTCCAATTTGACCCGATTTTAATATTTATATAATTTTGAAGGTTTAATTTTTCAAATTAAGGATGTAATTGCAACTACCACCATACTTCAGAGGTAGTTTTTGCAATTTGCCAATAATAATAATAATAATAAAATTATTATTAGGGAAATTTTTTAAAATAGAAAAATAAGGAAAATTATTTACACAAAATAACACAATTTTTAGATAGTTGTGATAGACACTGATAGAAGTCTATCAAGGTCTATCAGTGATAGAAATGATAGAAGTCTATCACTCATAGATGCTGATAGAAGTCTATCAATGTCTATTCGTATTTTTTTTATTATTTTCTGTAAAATATTTGACATTTTTTCTATTTGTGAAAATTTCTTTATTATTATTGAAGTGAATACACTAAGGCTTTGTTTGTATCCACCCACAATTTTAAATAGGCCATGACTTTTGTTTTACCTTTGCAACACTAATTTCACATTACAAATATTTGGCCAAGCCTCAGGTCCTCACATTCCCAGTCCATAACCTCTGCTCAGCCTTCCTCCAAAATTTCTCCAACTAATCTGATCATTTTTCATCCATGGCCGAATCAATTATCTTCGACGTTGCTGGAAGCGTTATAACCAAATTACGCTCTTCTGCACTCCGAGAGCTTGGATCGTTGTGGGGTGTCAATGACGAGCTTGACAGACTCCAAAACACTCTTTCGACCATTAAAGCCGTGCTTCTTGATGCAGAGGAGCAGCAGTCCAAGAGCCACAGAGTCAAGGATTGGATTTCAAAGCTTAAAGATGTTTTCTACGACATTGATGATTTGATTGACTAGTTCTCATATGAAACCTTGAGAAGACAAGTTCTAAACAAAGATACAAGAATCATCAAACAAGTACGTATCTTCTTCTCCAAATCTAATCAGATTTCGTTTGGTTTCAAAATGGGTCAAAAAATTAAACAAGTTAGGGAGAAACTAGATGCTATTGCTGCTGATAAAGCTCAACTCCATCTTTCTATGCGTACGAGGGAGATACAAGATGATGAAGTGTCAAGGAAGGTACGAGAGACTTCCTCTTTCATACCTGAGGGAGAAGTGATTGGTAGGGATGATGACAAGAAAGCTATTATAGATTTTCTAATGGATACCAAAACCAAAAAGGATAATGTTGAAGTGGTTTCCATAGTTGGCATGGGAGGATTAGGAAAGACCGCACTTGCTCAATCTATCTATAATGATGAGAATATAAACAAACATTTTAAGTTGAAATTATGGGTGTGTATTTCTGAGGAATTTGATGTCCAAACAATTGTCGAAAACAGTATAGAGTTTGTCTAGGAAAAGAAACCTGAGCCCCTTCAATTGGATAAATTACAAAGTGTGCTTCGAGAGAGAATTAATGGGAAAAAGTATTTGTTGGTCATGGATGATGTGTGGAATGAAAGCCATGAGAAATGGAGGGATCTAAAAAGATTTTTAATTGGTGGTGCCAAGGGAAGTAAGATTTTGGTGGCAACTCGTAATCAACAAGTTTCGCAGGCTTCTGACACAGTTTTGTTCCATCACTTAAAAGAACTTGACAAGGACAACTCTTGGGTGTGTTTTAGAAAAATGGCATTCTTAAACGAAGAAGAAGAGCTTGAGAATTCAAATTAGTTAGAATCAAGGACAACTCTTGGGTGTTGTTTAGAAAAATGGCATTCTTAAACGAAGAAGAAGAGCTTGAGAATTCAAATTAGTTAGAATCGGTAAAGAGATTGTAGCAAAGTTGAAAGGGTCTCCTCTTGCAATAAGGGTATTTGGGCGCCTGTTATATTTCAAAAACACAGAAATTGATTGGTTGTCGTTCAAGGACAACGAACTTTGTACAGTTTTGCAACAAGAAAATCAGATTCAGCCTTCCATCTCATTTGAAGCAATGTTTTACGTATTGTGCTTTGTTTCCCAAAGATTATGAGTTTCAAAAGGATGGATTGTAAAAACAATGGATGGCACAAGGTTTCATTCAACCACATAATAAGAAGGCAATGGAAGATGTTGGTGATGATTATTTTAAAGAGTTAGTGGGGAGGTCATTCTTTCAAGACATAAGAAAAAATAAATGGGGCGACATCAAGAAGTGCAAGATGCATGATTTGACGCATGATCTTGCGTGTTTGATAGTAGAAAATGAATAGTGGTTTTTAAGTGATGGCATTGGGTCCATTGACAAAAGGACTCGACATGTCTTATTTTCCTACAACACAAGGTCAATGCCAAGGAAAGTTGTACCAAAATCATTCATTGAGGCAAAGAGTTTGAGAACATTGAATGTTGATCGTGATGCTTCTTTTCGTTATTTCAAGAAAACTTATCACCTTAACCTTTTTCGATTACGAACATTGAGTTTGGACTATGACTGTTGTCATCCTCCCAAGTTTATTGATAAGTTGAAACATTTGAGATATCTTAATCTTTCTGGTTTGGATATAGATTTCCTTCCCAGTTTTATTACCAAATTGTATAATTTGGAAACATATATCCCTCGCGACTGCTTTTGGCTAAGAAAATTACCAAGAGATATTAAGAATTTGATGAATCTTAGGCATCTTGATATACATAAATGCTTAAGATTGACTCACATGCCAAAAGGATTAGGTGGGATGAGTAGCCTTCAGACAATGAATTTGTTTGTATTAGGGAAGGATAAGGGTGGTGATTTAAGTGAATTGAATGGACCTTAAAGCTTGAGAGGATCATTAAGTATAAGGGAATTACAATTTTGTGCAGCTTCTGATTTAAAAAATGCAAAATACTTGGAAGAAAAGTATGGAATTCAAAAGTTGGAATTACATTGGGACACAGATAAGAGGAAGCTAAAACTTGATGATGCCTCAGATGATGAGGGAGTTTTGGAGTGCTTAAAACCACATTCAAATGTTGGCAAAATGAGTATAGAAGGATACAGAGGAACAAAGTTATGTAATTGGGTATCTTCTGATTACTTGGGTAGTTTGGTGAGCATAGAGCTTCGGCATTGTGAAAAATTGGAGTATCTCCCTGAATTTGATCAATTTCCATATCTGAAGCATCTTCATCTTGAAAACTTACCCAATATCGAATACATAATTGATAATACCAGAAATCCCATTGAAATCTGCTCAATACACTGCTTCCCTTCCAATAGCATTACATCACCTTTCAATATTAAAGATTTCTGGATGTCCTCAGTTTGTTTCTATTCCACACTATCCACCTTTGCAATTATTGACAATAGATGGTGTTGGTTTGCAACTTTTTGCTATGGTAATAAGAATGGCTACAACTCTTGCTGTGGATTCTTCATCTTCTTCAACTTTGTCTAAATTATCTACTCTTGTGATTGGAAATATTGATCTTCAGTTCCTACCAGTCGAGTTATTCTGCAATATGAAAGATGTTGAGTTCCTTCGCATACAACATTGCAAAAATTTACAGATGTTTTCTTCCAATTTTGTGGGTGAGGAAGATGATAGCCTACTGTATTGGAAAGAACTTTGCAATCTCCGCAATTTTTCTCTATAG

mRNA sequence

ATGGCTAACAATGCTGAGAATCCTTCTTATTCCTCAAACCCTAATGTTCATGTGAATCCTTCTGTGATTCGAGCGGTGACTTTATCTACTGTGAATCCTTCTTCTGCTTCTGATTTAAAAAATGCAAAATACTTGGAAGAAAAGTATGGAATTCAAAAGTTGGAATTACATTGGGACACAGATAAGAGGAAGCTAAAACTTGATGATGCCTCAGATGATGAGGGAGTTTTGGAGTGCTTAAAACCACATTCAAATGTTGGCAAAATGAGTATAGAAGGATACAGAGGAACAAAGTTATGTAATTGGGTATCTTCTGATTACTTGGGTAGTTTGTTTGTTTCTATTCCACACTATCCACCTTTGCAATTATTGACAATAGATGGTGTTGGTTTGCAACTTTTTGCTATGGTAATAAGAATGGCTACAACTCTTGCTGTGGATTCTTCATCTTCTTCAACTTTGTCTAAATTATCTACTCTTGTGATTGGAAATATTGATCTTCAGTTCCTACCAGTCGAGTTATTCTGCAATATGAAAGATGTTGAGTTCCTTCGCATACAACATTGCAAAAATTTACAGATGTTTTCTTCCAATTTTGTGGGTGAGGAAGATGATAGCCTACTGTATTGGAAAGAACTTTGCAATCTCCGCAATTTTTCTCTATAG

Coding sequence (CDS)

ATGGCTAACAATGCTGAGAATCCTTCTTATTCCTCAAACCCTAATGTTCATGTGAATCCTTCTGTGATTCGAGCGGTGACTTTATCTACTGTGAATCCTTCTTCTGCTTCTGATTTAAAAAATGCAAAATACTTGGAAGAAAAGTATGGAATTCAAAAGTTGGAATTACATTGGGACACAGATAAGAGGAAGCTAAAACTTGATGATGCCTCAGATGATGAGGGAGTTTTGGAGTGCTTAAAACCACATTCAAATGTTGGCAAAATGAGTATAGAAGGATACAGAGGAACAAAGTTATGTAATTGGGTATCTTCTGATTACTTGGGTAGTTTGTTTGTTTCTATTCCACACTATCCACCTTTGCAATTATTGACAATAGATGGTGTTGGTTTGCAACTTTTTGCTATGGTAATAAGAATGGCTACAACTCTTGCTGTGGATTCTTCATCTTCTTCAACTTTGTCTAAATTATCTACTCTTGTGATTGGAAATATTGATCTTCAGTTCCTACCAGTCGAGTTATTCTGCAATATGAAAGATGTTGAGTTCCTTCGCATACAACATTGCAAAAATTTACAGATGTTTTCTTCCAATTTTGTGGGTGAGGAAGATGATAGCCTACTGTATTGGAAAGAACTTTGCAATCTCCGCAATTTTTCTCTATAG

Protein sequence

MANNAENPSYSSNPNVHVNPSVIRAVTLSTVNPSSASDLKNAKYLEEKYGIQKLELHWDTDKRKLKLDDASDDEGVLECLKPHSNVGKMSIEGYRGTKLCNWVSSDYLGSLFVSIPHYPPLQLLTIDGVGLQLFAMVIRMATTLAVDSSSSSTLSKLSTLVIGNIDLQFLPVELFCNMKDVEFLRIQHCKNLQMFSSNFVGEEDDSLLYWKELCNLRNFSL
Homology
[Close]
BLAST of HG10019067 vs. NCBI nr
Match: TYK10400.1 (disease resistance protein RGA2-like [Cucumis melo var. makuwa])

HSP 1 Score: 207.2 bits (526), Expect = 1.4e-49
Identity = 129/285 (45.26%), Postives = 146/285 (51.23%), Query Frame = 0 

Query: 38  DLKNAKYLEEKYGIQKLELHWDTDKRKLKLDDAS--DDEGVLECLKPHSNVGKMSIEGYR 97
           D++N KY EEK  I+KLELHWDTDK+K ++DDAS  +DE  LECLKPHSNVGKMSI+GYR
Sbjct: 711 DIENVKYFEEKSEIRKLELHWDTDKKKPRIDDASYAEDERTLECLKPHSNVGKMSIKGYR 770

Query: 98  GTKLCNWVSSDYLGSLFVS----------------------------------------- 157
           G KLC+WVSSDY     VS                                         
Sbjct: 771 GMKLCDWVSSDYFLDGLVSIELCHCEKLEHLPQFDQFPYLKNLHLEDLTNIEYIDDSNSV 830

Query: 158 ------------------------------------------------------------ 217
                                                                       
Sbjct: 831 SSSTTFFPSLEKLRIKKMPKLKGWWRRGEIPSNYSAQYNASLPTALHQLSQLWILDCPQL 890

[Close]
BLAST of HG10019067 vs. NCBI nr
Match: KAA0058599.1 (disease resistance protein RGA2-like [Cucumis melo var. makuwa])

HSP 1 Score: 207.2 bits (526), Expect = 1.4e-49
Identity = 129/285 (45.26%), Postives = 146/285 (51.23%), Query Frame = 0 

Query: 38  DLKNAKYLEEKYGIQKLELHWDTDKRKLKLDDAS--DDEGVLECLKPHSNVGKMSIEGYR 97
           D++N KY EEK  I+KLELHWDTDK+K ++DDAS  +DE  LECLKPHSNVGKMSI+GYR
Sbjct: 710 DIENVKYFEEKSEIRKLELHWDTDKKKPRIDDASYAEDERTLECLKPHSNVGKMSIKGYR 769

Query: 98  GTKLCNWVSSDYLGSLFVS----------------------------------------- 157
           G KLC+WVSSDY     VS                                         
Sbjct: 770 GMKLCDWVSSDYFLDGLVSIELCHCEKLEHLPQFDQFPYLKNLHLEDLTNIEYIDDSNSV 829

Query: 158 ------------------------------------------------------------ 217
                                                                       
Sbjct: 830 SSSTTFFPSLEKLRIKKMPKLKGWWRRGEIPSNYSAQYNASLPTALHQLSQLWILDCPQL 889

[Close]
BLAST of HG10019067 vs. NCBI nr
Match: XP_008461336.1 (PREDICTED: disease resistance protein RGA2-like [Cucumis melo])

HSP 1 Score: 204.9 bits (520), Expect = 7.1e-49
Identity = 129/285 (45.26%), Postives = 145/285 (50.88%), Query Frame = 0 

Query: 38  DLKNAKYLEEKYGIQKLELHWDTDKRKLKLDDAS--DDEGVLECLKPHSNVGKMSIEGYR 97
           D++N KY EEK  I+KLELHWDTDK+K ++DDAS  +DE  LECLKPHSNVGKMSI+GYR
Sbjct: 434 DIENVKYFEEKSEIRKLELHWDTDKKKPRIDDASYAEDERTLECLKPHSNVGKMSIKGYR 493

Query: 98  GTKLCNWVSSDYLGSLFVS----------------------------------------- 157
           G KLC+WVSSDY     VS                                         
Sbjct: 494 GMKLCDWVSSDYFLDGLVSIELCHCEKLEHLPQFDQFPYLKNLHLEDLTNIEYIDDSNSV 553

Query: 158 ------------------------------------------------------------ 217
                                                                       
Sbjct: 554 SSSTTFFPSLEKLRIKKMPKLKGWWRRGEIPSNYSAQYNASLPTALHQLSQLWILDCPQL 613

[Close]
BLAST of HG10019067 vs. NCBI nr
Match: TYK10410.1 (disease resistance protein RGA2-like [Cucumis melo var. makuwa])

HSP 1 Score: 203.0 bits (515), Expect = 2.7e-48
Identity = 127/286 (44.41%), Postives = 146/286 (51.05%), Query Frame = 0 

Query: 38  DLKNAKYLEEKYGIQKLELHWDTDKRKLKLDDAS--DDEGVLECLKPHSNVGKMSIEGYR 97
           D++N KY EEK  I+KLELHWDTDK+K ++DDAS  +DE  LECLKPHSNVGKMSI+GYR
Sbjct: 711 DIENVKYFEEKSEIRKLELHWDTDKKKPRIDDASYAEDERTLECLKPHSNVGKMSIKGYR 770

Query: 98  GTKLCNWVSSDYLGSLFVS----------------------------------------- 157
           G KLC+WVSSDY     VS                                         
Sbjct: 771 GMKLCDWVSSDYFLDGLVSIELCHCEKLEHLPQFDQFPYLKNLHLEDLTNIEYIDDSNSV 830

Query: 158 ------------------------------------------------------------ 217
                                                                       
Sbjct: 831 SSSTTFFPSLEKLRIKKMPKLKGWWRRGEIPSNYSAQYNASLPTALHQLSQLWILDCPQL 890

Query: 218 --IPHYPPLQLLTIDGVGLQLFAMVIRMATTLAVDSSSSSTLSKLSTLVIGNIDLQFLPV 219
             IP +PPLQ L I GVGL++F MVIRMAT LA DSSSSSTLSKLSTL I NID++FLP 
Sbjct: 891 AFIPQHPPLQSLAIGGVGLKVFDMVIRMATILAADSSSSSTLSKLSTLRIENIDIKFLPE 950

[Close]
BLAST of HG10019067 vs. NCBI nr
Match: KAA0058608.1 (disease resistance protein RGA2-like [Cucumis melo var. makuwa])

HSP 1 Score: 197.2 bits (500), Expect = 1.5e-46
Identity = 127/293 (43.34%), Postives = 145/293 (49.49%), Query Frame = 0 

Query: 38   DLKNAKYLEEKYGIQKLELHWDTDKRKLKLDDAS--DDEGVLECLKPHSNVGKMSIEGYR 97
            D++N KY EEK  I+KL+LHWDTDK K K+DDAS  +DE +LECLKPHSNV KMSI+GYR
Sbjct: 710  DIENVKYFEEKSEIRKLKLHWDTDKMKPKIDDASYAEDERILECLKPHSNVRKMSIKGYR 769

Query: 98   GTKLCNWVSSDY------------------------------------------------ 157
            G KLC+WVS DY                                                
Sbjct: 770  GMKLCDWVSPDYFLCVSPDYFQGGLVSIELCHCEKLEHLPQVDQFPYLKNLHLEDLSNIE 829

Query: 158  --------------------------------------------------------LGSL 217
                                                                    L  L
Sbjct: 830  YIDDTNSVSSSTTFFPSLEKLRIKKMPKLKGWWRRGEIPSNYSAQYTASLPTALHQLSQL 889

[Close]
BLAST of HG10019067 vs. ExPASy TrEMBL
Match: A0A5D3CGA8 (Disease resistance protein RGA2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G00430 PE=4 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 6.9e-50
Identity = 129/285 (45.26%), Postives = 146/285 (51.23%), Query Frame = 0 

Query: 38  DLKNAKYLEEKYGIQKLELHWDTDKRKLKLDDAS--DDEGVLECLKPHSNVGKMSIEGYR 97
           D++N KY EEK  I+KLELHWDTDK+K ++DDAS  +DE  LECLKPHSNVGKMSI+GYR
Sbjct: 711 DIENVKYFEEKSEIRKLELHWDTDKKKPRIDDASYAEDERTLECLKPHSNVGKMSIKGYR 770

Query: 98  GTKLCNWVSSDYLGSLFVS----------------------------------------- 157
           G KLC+WVSSDY     VS                                         
Sbjct: 771 GMKLCDWVSSDYFLDGLVSIELCHCEKLEHLPQFDQFPYLKNLHLEDLTNIEYIDDSNSV 830

Query: 158 ------------------------------------------------------------ 217
                                                                       
Sbjct: 831 SSSTTFFPSLEKLRIKKMPKLKGWWRRGEIPSNYSAQYNASLPTALHQLSQLWILDCPQL 890

[Close]
BLAST of HG10019067 vs. ExPASy TrEMBL
Match: A0A5A7UYK5 (Disease resistance protein RGA2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold339G00670 PE=4 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 6.9e-50
Identity = 129/285 (45.26%), Postives = 146/285 (51.23%), Query Frame = 0 

Query: 38  DLKNAKYLEEKYGIQKLELHWDTDKRKLKLDDAS--DDEGVLECLKPHSNVGKMSIEGYR 97
           D++N KY EEK  I+KLELHWDTDK+K ++DDAS  +DE  LECLKPHSNVGKMSI+GYR
Sbjct: 710 DIENVKYFEEKSEIRKLELHWDTDKKKPRIDDASYAEDERTLECLKPHSNVGKMSIKGYR 769

Query: 98  GTKLCNWVSSDYLGSLFVS----------------------------------------- 157
           G KLC+WVSSDY     VS                                         
Sbjct: 770 GMKLCDWVSSDYFLDGLVSIELCHCEKLEHLPQFDQFPYLKNLHLEDLTNIEYIDDSNSV 829

Query: 158 ------------------------------------------------------------ 217
                                                                       
Sbjct: 830 SSSTTFFPSLEKLRIKKMPKLKGWWRRGEIPSNYSAQYNASLPTALHQLSQLWILDCPQL 889

[Close]
BLAST of HG10019067 vs. ExPASy TrEMBL
Match: A0A1S3CEG6 (disease resistance protein RGA2-like OS=Cucumis melo OX=3656 GN=LOC103499950 PE=4 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 3.4e-49
Identity = 129/285 (45.26%), Postives = 145/285 (50.88%), Query Frame = 0 

Query: 38  DLKNAKYLEEKYGIQKLELHWDTDKRKLKLDDAS--DDEGVLECLKPHSNVGKMSIEGYR 97
           D++N KY EEK  I+KLELHWDTDK+K ++DDAS  +DE  LECLKPHSNVGKMSI+GYR
Sbjct: 434 DIENVKYFEEKSEIRKLELHWDTDKKKPRIDDASYAEDERTLECLKPHSNVGKMSIKGYR 493

Query: 98  GTKLCNWVSSDYLGSLFVS----------------------------------------- 157
           G KLC+WVSSDY     VS                                         
Sbjct: 494 GMKLCDWVSSDYFLDGLVSIELCHCEKLEHLPQFDQFPYLKNLHLEDLTNIEYIDDSNSV 553

Query: 158 ------------------------------------------------------------ 217
                                                                       
Sbjct: 554 SSSTTFFPSLEKLRIKKMPKLKGWWRRGEIPSNYSAQYNASLPTALHQLSQLWILDCPQL 613

[Close]
BLAST of HG10019067 vs. ExPASy TrEMBL
Match: A0A5D3CGC1 (Disease resistance protein RGA2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G00530 PE=4 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 1.3e-48
Identity = 127/286 (44.41%), Postives = 146/286 (51.05%), Query Frame = 0 

Query: 38  DLKNAKYLEEKYGIQKLELHWDTDKRKLKLDDAS--DDEGVLECLKPHSNVGKMSIEGYR 97
           D++N KY EEK  I+KLELHWDTDK+K ++DDAS  +DE  LECLKPHSNVGKMSI+GYR
Sbjct: 711 DIENVKYFEEKSEIRKLELHWDTDKKKPRIDDASYAEDERTLECLKPHSNVGKMSIKGYR 770

Query: 98  GTKLCNWVSSDYLGSLFVS----------------------------------------- 157
           G KLC+WVSSDY     VS                                         
Sbjct: 771 GMKLCDWVSSDYFLDGLVSIELCHCEKLEHLPQFDQFPYLKNLHLEDLTNIEYIDDSNSV 830

Query: 158 ------------------------------------------------------------ 217
                                                                       
Sbjct: 831 SSSTTFFPSLEKLRIKKMPKLKGWWRRGEIPSNYSAQYNASLPTALHQLSQLWILDCPQL 890

Query: 218 --IPHYPPLQLLTIDGVGLQLFAMVIRMATTLAVDSSSSSTLSKLSTLVIGNIDLQFLPV 219
             IP +PPLQ L I GVGL++F MVIRMAT LA DSSSSSTLSKLSTL I NID++FLP 
Sbjct: 891 AFIPQHPPLQSLAIGGVGLKVFDMVIRMATILAADSSSSSTLSKLSTLRIENIDIKFLPE 950

[Close]
BLAST of HG10019067 vs. ExPASy TrEMBL
Match: A0A5A7UTV6 (Disease resistance protein RGA2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold339G00770 PE=4 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 7.2e-47
Identity = 127/293 (43.34%), Postives = 145/293 (49.49%), Query Frame = 0 

Query: 38   DLKNAKYLEEKYGIQKLELHWDTDKRKLKLDDAS--DDEGVLECLKPHSNVGKMSIEGYR 97
            D++N KY EEK  I+KL+LHWDTDK K K+DDAS  +DE +LECLKPHSNV KMSI+GYR
Sbjct: 710  DIENVKYFEEKSEIRKLKLHWDTDKMKPKIDDASYAEDERILECLKPHSNVRKMSIKGYR 769

Query: 98   GTKLCNWVSSDY------------------------------------------------ 157
            G KLC+WVS DY                                                
Sbjct: 770  GMKLCDWVSPDYFLCVSPDYFQGGLVSIELCHCEKLEHLPQVDQFPYLKNLHLEDLSNIE 829

Query: 158  --------------------------------------------------------LGSL 217
                                                                    L  L
Sbjct: 830  YIDDTNSVSSSTTFFPSLEKLRIKKMPKLKGWWRRGEIPSNYSAQYTASLPTALHQLSQL 889

The following BLAST results are available for this feature:
BLAST of HG10019067 vs. NCBI nr
Match NameE-valueIdentityDescription
TYK10400.11.4e-4945.26disease resistance protein RGA2-like [Cucumis melo var. makuwa][more]
KAA0058599.11.4e-4945.26disease resistance protein RGA2-like [Cucumis melo var. makuwa][more]
XP_008461336.17.1e-4945.26PREDICTED: disease resistance protein RGA2-like [Cucumis melo][more]
TYK10410.12.7e-4844.41disease resistance protein RGA2-like [Cucumis melo var. makuwa][more]
KAA0058608.11.5e-4643.34disease resistance protein RGA2-like [Cucumis melo var. makuwa][more]
BLAST of HG10019067 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of HG10019067 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3CGA86.9e-5045.26Disease resistance protein RGA2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E... [more]
A0A5A7UYK56.9e-5045.26Disease resistance protein RGA2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E... [more]
A0A1S3CEG63.4e-4945.26disease resistance protein RGA2-like OS=Cucumis melo OX=3656 GN=LOC103499950 PE=... [more]
A0A5D3CGC11.3e-4844.41Disease resistance protein RGA2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E... [more]
A0A5A7UTV67.2e-4743.34Disease resistance protein RGA2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E... [more]
BLAST of HG10019067 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 7..221
e-value: 3.8E-6
score: 27.5
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 101..197

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10019067.1HG10019067.1mRNA