HG10019019 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10019019
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase
Location	Chr04: 14281888 .. 14292748 (-)
RNA-Seq Expression	HG10019019
Synteny	HG10019019

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCTTTCACGTTCTCAGAGCCCCTCCTTTCTCTTCCTCCACAACCATAATCTTCAAACCCACTTCTTCCGCTTCGATTCTCCTCAAATTTGGCTATGCTCTCTACTCTTCTCCCTTTTCCAAGTCTTCCTCCTCCAGGACCTATTTCCGAGCTTCTTCAGCCAACTATGTTGCTTCTCCGGCCACTGCAATTCCGCTTTCTGGGTCTTTTTCTCGGAGGACTCGTAGTTTTCGTGGTGGGTTTATTGCAGCTACAGCTGCACCTGGGTCAGTCCACAAATCGGAGGAACTGAGGCCTTCTATTTCGCCTGAGAAATCTTGGTTTCAGACACAAAATGGGGCTGAGTAAGACTGTAAACTTCTTTACAAATGTTAACTCGCATTTTCTTCTATTCGTTTTCTTTTTGAAAATTGTCAAGTGATATGGATATACTTATTAATGTGTATGTTGTAATTGGGAGGCTTAAAAGAGGTCGATGAGCAATTGAAATGTTGGATCATTATGTGTATACGGGTGGACATTGTTTGTTATTCTGATAACCGATTTTGAAGTTTATGCCGTTGAAGGTTGTTACTACATAACATAGTATAATTTTCTTACGTACAAATTTAGACTGCTCGAGGCACAGAAGTCAAGGAGGACTAGTTCCTTGAACATTGAGTATGCTTCTATTTACAGTGTGAATTGTTGTTCTCCAATTTAGTTTCTTTATTTTGCTAATGCTAGGGGCCAGCACTCTTAAAAAGAATCTGCCTGTGCTAACACATGCTTTGTCAACTATATTATAGAGGGCTGATAATCTACGTCGGTGTGGTGTTTGAGTGTTTAGTTTAACTTACGTCGGTGTGGTGTTTGGGACTTTGACAATTAAGTTAGGAGGTTATCATGACATCATGGAGTGTAATTCATTAAAAGTTACATCTTAGAGAATCTAAAGGCCTTACCTAGGGCATCTATGAGGATGACAGATATAAACTGAAGCTGAATTTGATTGTAATTAATAAGGGATGAGTGACGGTCTCATCTTGCTTTCTTTATATGCCTCGTGTTATCAACTCCTAGCCATCTATTTTCTTTATATGCCTCATGTTTTCAACTCCTAGCTGTCCATTTTCTTAAGCTAAAGATACTGCCTTCCGATTTACACCTGGTCTGCGTATAGGCATTATCCTATACTTATCCTCATCGACCGTTTTCTTCTCAAGGAGAGTATCTGATAGGTCTTAGCCTCAATTTTATTTATCAACAGCTGGGGAAGAATTCAAGAGCTTCCCAATCTCTCCCAAGATCACATCAGAGACTAATTACACAATGATAATTTTTCATATCCCCAACCAATATTCCAGGGCCCACTTACTAACTAACTATTCCCCTCTTTTGTCCTTACATGTATAAACTTTTATCCCTGGGGATCTATCATTACCCGCCCGCCAAAGAGCCACCTTGTCCTCAAGGTGGAAGTCAGGAAACTGGGATTTGATCAGGTCTGCTTGTTCCCAAGTTGCATCCTCTGGTAAACTATTCGCCCATTGTATCAGAACCTCCAGAATTCCTTCCTCAATAGGGGATTGACGTAAGCCTAAAATAGCCGCTGGCGTGATGGCTATGGATAGATCTGGTGCCAATGTTGGTGGAATAGGAAAAACTGGTACGTTGGTCCCAACTTCCTTTCTCAGTATTGATACATGAAAAACGGGGTGAATCCCAACGTTTGCGGGCAGGGCAAGGCGGTAGGCTACTGGCCTGATCCGTGCCGTGATCTGAAATGGGCCGACAAAACGCGGGGCCAGCTTTGGGTGAGTATGCTTACTGAGGGACGCTTGGCGGTATGGTCGAAGCTTTAAATACACCCAGTCATTTGACTTCGTATTGCACATCCCTCCTTTTAGTGTTTGCTAATTTAATCATTCGTTGTTGAGCTCGTAATAGGGAAGCTTTCAATTGTTTCAACATTTCATCCCGTTCAAATAGTAATCGATCAATCTCATGTACCATGCTCGTCCCCTTGTTGTAAGGCAGTAAAGGTGGTGGGGGTCGTCTGTAGACTGCCTCGAAGGGAGTGATATGTGTGGATGTATGATGAGATGTATTATAGCTAAATTCTGCCCATGGTAACCATTTACACCATTGTTTAGGTGTGCTCATGGTGAAACAACGCAAGTACGTTTCAACCCCTCGATTGACCACTTCCGTATGTTCGTCTGTCTGTGGATGTGGGTGATAAGCAGTGCTCCTTCTCAGCTGCGTCCCTAACAACTGCATAAGTTCTTCCCAGAATAAACTCGTGAATATTTTGTCCCTGTCAGAAACTATGCTCTGTGGACAACCATGTAATCGGACAACTTCACGGAAAAAAGCAGTAGCAATAGACATTGCAGTGAAAGGATGTTTAAGGGGAATGAAATGGGCATATTTTGATAGCCGATCCACTATGACCAAAATCGTATCAAAACCCTCGGATTTAGGTATGCCTTCAATAAAGTCCATGCTTATATCATCCTAGATTCTGTTAGGGATTGGAAGAGATTGAAGAAGAGCTGCTGGAGATAGAGTTAAGTACTTCGCTTGCTGGCGTATTGCACATTCAGCAACAAAAGCTTGGACTCGAGCTTTCATTCTGACCCAATATACCTCTCGGATAGTCGCTGGAAAGTTTTCAATGCTCCTTGGTGACCGCCAATCGGGCTGTTATGAAATTCTGCTAATAATAGGGGAATGGTTGGTGAATTTGCTGGAAAAACCAAGCGGCCCCGATAAATTAATAACTCTCTATTAATCGCATACCCCGCGGGAGTTGGTTGCCTATGGAGTAGCCCCTGAAAAATCCCATTAAGGGTGTTGTCTTCCCGAACCTATTCACTGAACACGACCGTGTTAATTCCTCCCACCACACTGAGAAACCCAAATTCCATTGCAAGCGGTAACCTGGACAGGGCATTCGCTGCTGAATTTTCCAACCCTTTCTTGTATTCGATGGAGAAGTCATAACCCATTAATTTGGCAGTCCATCGTTGATACTCTCCCGCGACCACCCTTTGTTCAAGTAAGAACTTAAGGCTTCGTTGGTCCGTGCGGACAACAAAATGTTTCCCCAACAAATATGCTTGCAATTTCTGAACTGCGATGACGATCGTCATTAATTCCTGTTCATACACCGCCTTATAACGATGTGTCGGTGGTAGCGCCTGACTAAAATACGCAAGTGGTCGTTGGGTTTGCATCAAAACTGCGCCCACCCCAACTCCCGATGCATCAGTTTCAACAACGAAAACTTGAGAAAAATTGGGTATATATCGGGCATACCCAACACCGGAATCGACATCATTGCTGATTTCAATCGTTGAAAAGCCTCCTCTGCCTCTTAATTCCATAAGAATCCTCCTTTCTTTAGTAGTTGAGTCAACGGTAAAGCAATGGACCCATAATTGGCAACAAATTTACGGTAATATCCTGTGAGACCCAGGAACCCACGTAATTCCTTAATGTTCCTTGGTACAGGCCAACTATTCATGGCCTCCAACTTCACTGGATTGGTTGCCACCCCATCGGCGGATATGATATGACCCAAATATTCAATGCTTGTAACGACAAATTGGCACTTTTTAAAATTTGCTATCAGGTGATTCCCATGTAACAGCCTCGAAACCAATTCCAGATGCGAGAGATGGTCTTCCTCCGAAGAGCTATAGATTAGAATGTCATCAAAGAAAACAAGCACAAACTTCCGTAGGTACGGTCGGAGAATGTCATTCATGATTGATTGGAATGTAGCTGGGGCATTCTTTGGGCCGAAAGGCATCACCACGAATTCATAATGACCTTCATGTGTACGGAATGCGGTTTTATGAATGTCTATTGGTCGCACCCTGATTTGTTGATAACCCGATTTCAAATTGATTTTAGAAAACACCACAACCCCATATAACTCATCCAGTAATTCATCCACCACTGGTATCGGGTACTTATCTGGAATTGTCACGTGGTTCAATGCTCGATAATCAATGCAGAAGCGCCAGCTGCCGTCTTTCTTTTTGATGAGTAACACCGGGCTGGAGAAAGCACTACGGCTAGGTTGAATAACTCCTGCGGTCAACATTTCTTGAACCAAGCATTCAATTTCCTCATTTTGGAACTGCGGGTAACGATAGGGCCTAACGTTAACTGGACCTGTCCCGGGTTGTAGTTCAATCGTGTGATCATGTGGTCTCTCCGGCGGCAATGAATCTAATGGCTTAAACACAATGGAAAATTTCCACCGCAAGTCCTGAATGGCGTTTGGTAATGTGTTAATATCCCCAAGTTCGTCCACCTCTTTAATATCAGAATCCACCCGCTCTAAGGCACTTAGCTCAATCAGTATGCCCTGATCCTCACTCGATAAAGACTTCATCATTGCTTTGAGAGATACTCGCGATTTGACCAAACTCCGATCACCACACAAATGCACGAGCCATTCCCTTACCCAAAAATCCATCTCGGATAATTGATAATCAAATTGAATTTTTCCTAATGTCTCCAGCCAAGTAACCCCTAGAATTACATCCGCACTGCCCAGAGGTAAAGGAAGAAAATCATGTATAATTGATAATTCAGAGATAGTTAAGAGCACACCTCGACAAATTCCCGCGGCTTGGACAGTACTGCTAGTCTTTAGAACCACCCCATAATCCTTTGATGGTGATATCGATAGTTGTAGCTCTGCCACCACTTCCTCCGATATGAATCTATGGGTAGCACCACCATCGATTAAGACAATCACTTCCCTTCCCCGGATTTCCCCTTTCACCTTCAATGTCTTCGGGGAATCAAATCCGGCCAACGAGTTTAACGATAGTGTGGCGACTTCTGCGTCCGTGGGTTCTTCCGCCTTCTCGTTGGCCATTTCCCCTTCTAATTCCCCCTGTTCCTCGCTCAGATCCTCCCCTTCTTGTACGACGAACACATTCAACTCCTTTTTAGGGCATCGATGTCCCGCACTAAATTTTTCGTCACACTTGAAACATAGCCCTTTATCCTTCTTAATTTGTATTTCACTGTCCGTCAATCGGCGATAGGGAGCCGTTGGTGGTGCGAATTTTCCCCCAGATGATCCTGCTGTGGATATGGACGTAGAAGACGTTGCTGAGCTCTGATGAGGGCTGATTGTGATCGTGCGAGCTGATTGATTTCCACTTGAATTGTTATTAGCATTGGTATTGGGCCCATTTGAACTTACATTGGACGACCCAGCTGGCCCATTTTTTGTTGCCGATGGGCTGCTCGATACCCCTTTAATTCTTTTCATTTCTATTGCCAAATCATCTTCTATTATTTGGGCCATCTCCATCTTGGCCGTGAGGCCCACTGGATTTAATTTTCTCCTTTCACTTTGTATGTCTTCCTTGAGCCCACAAACAAATTTTCTCTCTAGGGTTGCATGACTCATGTCTTTCAGACCCACCGCGAATTGCTCAAATCGTCGGTGATATTCTCGTACAGTCGTCTCTTGCTGCAATTTCATTAGTCGTGCATGCTTATCCCCTTGATCCGATGGCCAGAATTGTTTCCACAGAAGCTGTTGAAATTTCGTCCAACTTCCGATCTTCCCTTGGTCATCTCGCCACTGATACCAATCAAGAGCTTCTCCTTCCAAGCATAGGACGGTAGCGTCGAGCTTATCTCTCTCGGTTAGACAATTTACCACAAAATACCGTTCCACCCTATGGAGCCAACCATCTACTTCTCCTTTGAAAATTGGTGCCTCCAGCTTCTGCAAATGCATGTTGAACAAGGGAACCTCCCGATTATTCGGAGCACAAGGGGCACTAATACCCTCACTGCTTACCAGGTCAGTATTTTGGTCGTTGTTCATTCCTTGCATTGAGCTTTCTTCCATCGATTTTTTTCCTTTATCCGTGATTATCCTTTCTGTTGATGGCGTTTCCTTCGGTCCACTGCTTCACACATCCATTCTTTGTAATATCGACTCAAAATTCTTCTCCATTCTTTGTTCTGCTTTCGCCCGATTCACCTCTGCTTTGCAAATCGCGATTCGAACTTCCCTTCCAATTCAGAGACCTTCGTTGACAGCCCGACCATCTTCTCTTCCAATTCTACCACTCTAGCCTCCATCTTTCCCACCATTCCAGAAACAACTGCTCTGATACTAAATTGATGTCTTAGCCTCAATTTTATTTATCAACAGCTGGGGAAGAATTCAAGAGCTTTCCAATTCCCCCCCTCCAAACAAACTCTCTTAATATTTATAACAGATATTCTATAACAACCAATATTCCCGGGCCCACTTACTAACTAACTATTCCCCCTCTTTTGTGCCTACGTGTATAAACTTTTATCCATGGTAATTCCTTAATGTTCCTTGGTACAGGCCAACTATTCATGGCCTCCAACTTCACTGGATTGGTTGCCACCCCATCGGCGGATATGATATGACCCAAATATTCAATGCTTGTAACGACAAATTGGCACTTTTTAAAATTTGCTATCAGGTGATTCCCATGTAACAGCCTCGAAACCAATTCCAGATGCGAGAGATGGTCTTCCTCCGAAGAGCTATAGATTAGAATGTCATCAAAGAAAACAAGCACAAACTTCCGTAGGTACGGTCGGAGAATGTCATTCATGATTGATTGGAACGTAGCTGGGGCATTCTTTGGGCCGAAAGGCATCACCACGAATTCATAATGACCTTCATGTGTACGGAATGCGGTTTTATGAATGTCTATTGGGTTTTATAAACTTTTATCCATGGTGATCTATCAGTATCCAACAAAAATTTGCCTATACCACTTCTAGGAGGTTGGAAAGGCCCACATCAGATCATTTCCCTATTCTTCTATCTATTGGTGTGGACAAATGGGGCCCTACCCTCTTTTGTGATGTAGCCTAAAAGACAAGGAAAGAAATCTCCAATAATAAAATCAAAGTCTTTATTATGAATCAAAAGTTATCAATATAAGAAGACAATTACTCTATTTATAGAGAATTCGAAAACAAACTAATCCTGATACTAATTAATAAAAGAAACTAATCCTAATCCTATTCAATCGAGGATTTGACCAAAATACCCTAAGTTACTTTAGTCCTACTACATCAGTTTTTCTGTTGGAGGATCTTTTTGTCTCTTGAAACTATGAAGCGGTGTTCAGTTCTCAGATAGTTTTTGTAGTCTGGCTGCTTTGCATTCCCCTAGCTGCTCTCATAATTTCCTACCGTTCTTTATTTTAACTTTTATTTATTTTCTTTTTACAAGACATACTTCCCTATGTATTTATTCTATGTTCCATTTTATATTTCGTCATTTTTGGGGCTTGTATCCCTCGAGAGCTTTAGTCTCTTTTCATTTACTAATTATTCAATGAAAAGTTTTGTTTCTTGGTAAAGATAAAGTTGGTAACGTATTAGAGCACGTCAATGCTTGGTATGGATGCAAGGTAATGAATATTTCTGCATCAATGAAGTCAAATAAGAAAAGAGATGAAATCGAAACAAAAGAATTCTATAGGCAATACCTAGTTACAAGAGGATGCCAAATGTTTCAAACAATAATGTTGAATGAGAGCGACGAGTAAGGAGCATGGTGTTTTTTTGGCCAAGACTTAAAAATGTTGGAATTGAAAGTATCAACGTCCTGGTCCTTAATTTTAAGACACCTCCTCTTGATAGAAAAACAAATGATTTGCCTCCTCTCAGTGGTGTGAACACTGAATTTGAGAACATTGAAGTTAAGTCAAGTCTGGTTCTTTTCTTGCACATTATTATCTCTTCACCTCTTTAATAGCAGGACTGGCATTTATCATATCTGTAATGCAAATTGGTTGTAAAGGAAGGAGATAATATTTGAAGGAGTTTATTGTGTTCATATATTTTGGAGGTCTTGAAGCTTACGTGTTGGAGCCTTTAATTGTGGCTTTCTAGCTAGGGACTTTTGTATCTACTCTCCCCTCATAATTAATGCTCGTGAGTACTTTCTGTAATCTCGTATAGCTCTCACAATAGTAGGCAGCCCTCATTTTTCTCTATTGTCTGTATCTTTCATGGAGAGATAATATATTTGACCAAGTTTTTCCATATCAAGTAATACAGTTTAGAGAATTATGTGCCAAATCTGAATGTTTCTTTTCTTTTTATTCTTGACCAGATCCTTACCAGCTTCTGAAGTGCCTTTGAGAGGTCGTATTTATCATGAAACTTATGGGTGTCAAATGAATATTAACGATATGGAGGTTGTTCTATCTATCATGAAAAATGCTGGATACAGTGAAACTGTTGACATTCCTGAGACTGCAGAGATCATTTTTATCAACACTTGTGCTATCAGGGACAATGCCGAACAGAAGGTGTGGCAAAGACTTAATTACTTTTGGTTTCTGAAGAGACAGTGGAAAAGTAACGTTGCTATAGGAAGGTCACAGTCTCGGCACCCTCCAAAAGTAGTTGTTTTGGGGTGCATGGCTGAGAGGTTGAAAGATAAGATACTAGATGCAGACAAGATGGTTGATGTGGTTTGTGGACCTGATGCGTACAGAGATCTACCACGATTATTGGATGAAGTAGATTATGGTCAAAAGGGAATAAACACACTTCTTTCCCTTGAAGAAACTTATGCTGACATAAGTCCAGTACGAATATCCAAAAATTCAGTCACTGCATTTGTATCTGTAATGAGAGGTTGCAACAATATGTGCTCATTCTGCATTGTTCCTTTCACCAGGGGCAGAGAGCGGTCACGTCCTGTTGAATCAATTGTGTGTGAGGTTAGGGAACTTTATGGAGAAGGTGTGAAAGAGGTAACTCTTCTTGGTCAGAATGTTAACAGCTATAATGATACCACTGAGAACGCAGACGTAGAGCCAGGAACTAATTGGAAACTCAGTGATGGATTTTCCACCATAGCCAAGGTTAAGAAAATGGGTTTGCGTTTCTCAGATCTCTTAGATCGTCTATCCACAGAATTCCCTGAGATGAGGTTTAGATACACATCCCCACATCCTAAAGACTTTCCCGATGAATTCCTTTATTTAATGCGAGACAGACAAAACATTTGCAAAAGCATCCATTTACCTGCTCAGAGTGGGAATAGCACTGTTCTCGAAAGAATGCGTAGGGGATATACTCGAGAGGCCTACTTGGATCTTGTGCATAAGATTCGATCAATCATTCCAGACGTTGGAATAACTAGTGATTTCATTTGTGGTAAGTGGGCCTTTTGAACTTCTATAATGTTTTTCTCATAAAAAAATTCTATAATATTTTGGATTAAACATGGGTTATATTGTACATAAAAACATTCGTACCATCGAGTAGTTAGAAGTGCCTAGCCAATTAGCTAGCATTCCTTTGAAATGCCTAGCCAATGGCAGTGGTTGTTGGATCAGGATATTGAACTTCTTTGTTTCTGAAATCTCCATTCTTTTTTTTTTTCAGTCAACCATTTTTTTAAAAAGGAAACAAAATTTTCATTGATAAAATTAAAATAGACTAATGCTCAGAGATACAATAATCCTCCATAATCCCTAACCATTCTAGCTATAAAGAAATGTTTGCATCAGAAATCAGATTGCAGATATGTAGAACAGTCTAAGCTCCATTTAAAACACTAGCTGATTCGTTGGTCAGTTAACTGGCTAATGTTTGTTCTTTCATTCAATTTCTCTTTTCGTTATCTTACGGTATTTGTAAAACTACTAATTGTTCTAGAATTTAGCTGTTGGAGGACCACATTTGTGAATCTGTCATTGCCTTTCTCTGCTGAAGAACATTGTCAAATTCTTGTGTGACCGTTGCATAACTTGCTGAGTTGGATCCATGTCATATTTAATTTTCCAGCAAAGTAGCTTGCGCTAATATTGGAGTTATTGCATGGTTAATGCAAACAATAGCATTTATGACATGCTTGGGAGTGATTCTGAAATAGTTGAAATCATTTTTGTCATTTCAAAATTATTTTAAAGTATACTTTTAATTATTAAAAACCAATTTTAGTGATATGAAAATTGCATTTAAAAGTGTAAAATAAATATTAAATTAAATTTGAGTGATTAAGAGTGCGTTGCGAGGTGGTTTTCAACATGCCAACAGTGATTTTAATCATTTTAAAATCACTTTGCAACATGCACTTAGAGTTGGAACCATGCACTTAGAGTCGGAACCTTCTTCTTTTTTGCCTATACATATGGACATTAGAGATTGTTTTTCTATTTCCCTCAAAGTTATGAACTACATTCCCCCTTTAATATAGTGGTTTCAAATTGGAAAATAATGTATTGTTATTATTTCTCCATGTTATTAATTGTAATGTAATGCACTTGGTGGTATTGCTGTCTTGATGCATCATTTTTCATTCCAATTTATAGGTTTTTGTGGGGAGACAGAAGAGGAACATGCGGACACCCTAAGTCTGATTAATGAAGTTGGTTACGATATGGCTTACATGTTTGCATATAGCATGAGGGAAAAGACTCATGCCCATCGGAACTATGTCGATGACGTTCCAGAGGAAGTGAAGCAGAGAAGACTTACTGAACTCATTGAAACTTTTCGAAACAGTACAGGACGGTGTTATGATTCACAAATTGGTAGTGTTCAATTGGTGCTTGTGGAAGGACCAAACAAGAGAGCCCCAGAGACAGAGATGATCGGCAAGAGTGACAGAGGTCATAGAGTTTCGTTCGTTAATGTCGCAGTTCCACATCGAGATGGTGATTATGATGGACAGCGGAAAGCAGTGGTTGGTGATTTTGTGGAAGTCCGTATATCAAAATCGACACGAGCATCATTGTTTGGAGAGGCACTTGCCATCACAAAACTGAGCTCATTCTACAACAGTATGGATGAATCAATTGCCTGTGTGAGCTGA

mRNA sequence

ATGGGCTTTCACGTTCTCAGAGCCCCTCCTTTCTCTTCCTCCACAACCATAATCTTCAAACCCACTTCTTCCGCTTCGATTCTCCTCAAATTTGGCTATGCTCTCTACTCTTCTCCCTTTTCCAAGTCTTCCTCCTCCAGGACCTATTTCCGAGCTTCTTCAGCCAACTATGTTGCTTCTCCGGCCACTGCAATTCCGCTTTCTGGGTCTTTTTCTCGGAGGACTCGTAGTTTTCGTGGTGGGTTTATTGCAGCTACAGCTGCACCTGGGTCAGTCCACAAATCGGAGGAACTGAGGCCTTCTATTTCGCCTGAGAAATCTTGGTTTCAGACACAAAATGGGGCTGAATCCTTACCAGCTTCTGAAGTGCCTTTGAGAGGTCGTATTTATCATGAAACTTATGGGTGTCAAATGAATATTAACGATATGGAGGTTGTTCTATCTATCATGAAAAATGCTGGATACAGTGAAACTGTTGACATTCCTGAGACTGCAGAGATCATTTTTATCAACACTTGTGCTATCAGGGACAATGCCGAACAGAAGGTGTGGCAAAGACTTAATTACTTTTGGTTTCTGAAGAGACAGTGGAAAAGTAACGTTGCTATAGGAAGGTCACAGTCTCGGCACCCTCCAAAAGTAGTTGTTTTGGGGTGCATGGCTGAGAGGTTGAAAGATAAGATACTAGATGCAGACAAGATGGTTGATGTGGTTTGTGGACCTGATGCGTACAGAGATCTACCACGATTATTGGATGAAGTAGATTATGGTCAAAAGGGAATAAACACACTTCTTTCCCTTGAAGAAACTTATGCTGACATAAGTCCAGTACGAATATCCAAAAATTCAGTCACTGCATTTGTATCTGTAATGAGAGGTTGCAACAATATGTGCTCATTCTGCATTGTTCCTTTCACCAGGGGCAGAGAGCGGTCACGTCCTGTTGAATCAATTGTGTGTGAGGTTAGGGAACTTTATGGAGAAGGTGTGAAAGAGGTAACTCTTCTTGGTCAGAATGTTAACAGCTATAATGATACCACTGAGAACGCAGACGTAGAGCCAGGAACTAATTGGAAACTCAGTGATGGATTTTCCACCATAGCCAAGGTTAAGAAAATGGGTTTGCGTTTCTCAGATCTCTTAGATCGTCTATCCACAGAATTCCCTGAGATGAGGTTTAGATACACATCCCCACATCCTAAAGACTTTCCCGATGAATTCCTTTATTTAATGCGAGACAGACAAAACATTTGCAAAAGCATCCATTTACCTGCTCAGAGTGGGAATAGCACTGTTCTCGAAAGAATGCGTAGGGGATATACTCGAGAGGCCTACTTGGATCTTGTGCATAAGATTCGATCAATCATTCCAGACGTTGGAATAACTAGTGATTTCATTTGTGGTTTTTGTGGGGAGACAGAAGAGGAACATGCGGACACCCTAAGTCTGATTAATGAAGTTGGTTACGATATGGCTTACATGTTTGCATATAGCATGAGGGAAAAGACTCATGCCCATCGGAACTATGTCGATGACGTTCCAGAGGAAGTGAAGCAGAGAAGACTTACTGAACTCATTGAAACTTTTCGAAACAGTACAGGACGGTGTTATGATTCACAAATTGGTAGTGTTCAATTGGTGCTTGTGGAAGGACCAAACAAGAGAGCCCCAGAGACAGAGATGATCGGCAAGAGTGACAGAGGTCATAGAGTTTCGTTCGTTAATGTCGCAGTTCCACATCGAGATGGTGATTATGATGGACAGCGGAAAGCAGTGGTTGGTGATTTTGTGGAAGTCCGTATATCAAAATCGACACGAGCATCATTGTTTGGAGAGGCACTTGCCATCACAAAACTGAGCTCATTCTACAACAGTATGGATGAATCAATTGCCTGTGTGAGCTGA

Coding sequence (CDS)

ATGGGCTTTCACGTTCTCAGAGCCCCTCCTTTCTCTTCCTCCACAACCATAATCTTCAAACCCACTTCTTCCGCTTCGATTCTCCTCAAATTTGGCTATGCTCTCTACTCTTCTCCCTTTTCCAAGTCTTCCTCCTCCAGGACCTATTTCCGAGCTTCTTCAGCCAACTATGTTGCTTCTCCGGCCACTGCAATTCCGCTTTCTGGGTCTTTTTCTCGGAGGACTCGTAGTTTTCGTGGTGGGTTTATTGCAGCTACAGCTGCACCTGGGTCAGTCCACAAATCGGAGGAACTGAGGCCTTCTATTTCGCCTGAGAAATCTTGGTTTCAGACACAAAATGGGGCTGAATCCTTACCAGCTTCTGAAGTGCCTTTGAGAGGTCGTATTTATCATGAAACTTATGGGTGTCAAATGAATATTAACGATATGGAGGTTGTTCTATCTATCATGAAAAATGCTGGATACAGTGAAACTGTTGACATTCCTGAGACTGCAGAGATCATTTTTATCAACACTTGTGCTATCAGGGACAATGCCGAACAGAAGGTGTGGCAAAGACTTAATTACTTTTGGTTTCTGAAGAGACAGTGGAAAAGTAACGTTGCTATAGGAAGGTCACAGTCTCGGCACCCTCCAAAAGTAGTTGTTTTGGGGTGCATGGCTGAGAGGTTGAAAGATAAGATACTAGATGCAGACAAGATGGTTGATGTGGTTTGTGGACCTGATGCGTACAGAGATCTACCACGATTATTGGATGAAGTAGATTATGGTCAAAAGGGAATAAACACACTTCTTTCCCTTGAAGAAACTTATGCTGACATAAGTCCAGTACGAATATCCAAAAATTCAGTCACTGCATTTGTATCTGTAATGAGAGGTTGCAACAATATGTGCTCATTCTGCATTGTTCCTTTCACCAGGGGCAGAGAGCGGTCACGTCCTGTTGAATCAATTGTGTGTGAGGTTAGGGAACTTTATGGAGAAGGTGTGAAAGAGGTAACTCTTCTTGGTCAGAATGTTAACAGCTATAATGATACCACTGAGAACGCAGACGTAGAGCCAGGAACTAATTGGAAACTCAGTGATGGATTTTCCACCATAGCCAAGGTTAAGAAAATGGGTTTGCGTTTCTCAGATCTCTTAGATCGTCTATCCACAGAATTCCCTGAGATGAGGTTTAGATACACATCCCCACATCCTAAAGACTTTCCCGATGAATTCCTTTATTTAATGCGAGACAGACAAAACATTTGCAAAAGCATCCATTTACCTGCTCAGAGTGGGAATAGCACTGTTCTCGAAAGAATGCGTAGGGGATATACTCGAGAGGCCTACTTGGATCTTGTGCATAAGATTCGATCAATCATTCCAGACGTTGGAATAACTAGTGATTTCATTTGTGGTTTTTGTGGGGAGACAGAAGAGGAACATGCGGACACCCTAAGTCTGATTAATGAAGTTGGTTACGATATGGCTTACATGTTTGCATATAGCATGAGGGAAAAGACTCATGCCCATCGGAACTATGTCGATGACGTTCCAGAGGAAGTGAAGCAGAGAAGACTTACTGAACTCATTGAAACTTTTCGAAACAGTACAGGACGGTGTTATGATTCACAAATTGGTAGTGTTCAATTGGTGCTTGTGGAAGGACCAAACAAGAGAGCCCCAGAGACAGAGATGATCGGCAAGAGTGACAGAGGTCATAGAGTTTCGTTCGTTAATGTCGCAGTTCCACATCGAGATGGTGATTATGATGGACAGCGGAAAGCAGTGGTTGGTGATTTTGTGGAAGTCCGTATATCAAAATCGACACGAGCATCATTGTTTGGAGAGGCACTTGCCATCACAAAACTGAGCTCATTCTACAACAGTATGGATGAATCAATTGCCTGTGTGAGCTGA

Protein sequence

MGFHVLRAPPFSSSTTIIFKPTSSASILLKFGYALYSSPFSKSSSSRTYFRASSANYVASPATAIPLSGSFSRRTRSFRGGFIAATAAPGSVHKSEELRPSISPEKSWFQTQNGAESLPASEVPLRGRIYHETYGCQMNINDMEVVLSIMKNAGYSETVDIPETAEIIFINTCAIRDNAEQKVWQRLNYFWFLKRQWKSNVAIGRSQSRHPPKVVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLDEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVCEVRELYGEGVKEVTLLGQNVNSYNDTTENADVEPGTNWKLSDGFSTIAKVKKMGLRFSDLLDRLSTEFPEMRFRYTSPHPKDFPDEFLYLMRDRQNICKSIHLPAQSGNSTVLERMRRGYTREAYLDLVHKIRSIIPDVGITSDFICGFCGETEEEHADTLSLINEVGYDMAYMFAYSMREKTHAHRNYVDDVPEEVKQRRLTELIETFRNSTGRCYDSQIGSVQLVLVEGPNKRAPETEMIGKSDRGHRVSFVNVAVPHRDGDYDGQRKAVVGDFVEVRISKSTRASLFGEALAITKLSSFYNSMDESIACVS

Homology

[Close]

BLAST of HG10019019 vs. NCBI nr
Match: XP_038887766.1 (CDK5RAP1-like protein isoform X2 [Benincasa hispida])

HSP 1 Score: 1220.7 bits (3157), Expect = 0.0e+00
Identity = 610/637 (95.76%), Postives = 621/637 (97.49%), Query Frame = 0


Query: 1   MGFHVLRAPPFSSSTTIIFKPTSSASILLKFGYALYSSPFSK---SSSSRTYFRASSANY 60
           MGF+VLRAPPFSSSTTII KPTSSAS+L KFGYALYSSPFSK   SSSSRTYFRASSA Y
Sbjct: 1   MGFYVLRAPPFSSSTTIILKPTSSASLLFKFGYALYSSPFSKFSSSSSSRTYFRASSARY 60

Query: 61  VASPATAIPLSGSFSRRTRSFRGGFIAATAAPGSVHKSEELRPSISPEKSWFQTQNGAES 120
           VAS ATAIPLSGS  RRTRSFRGGFIAATAAPGSV+KSEEL+PSISPE+ W Q +NG ES
Sbjct: 61  VASTATAIPLSGSLPRRTRSFRGGFIAATAAPGSVYKSEELKPSISPEQPWVQRKNGTES 120

Query: 121 LPASEVPLRGRIYHETYGCQMNINDMEVVLSIMKNAGYSETVDIPETAEIIFINTCAIRD 180
           LPASEVPLRGRIYHETYGCQMNINDMEVVLSIMKNAGYSETVDIPETAEIIFINTCAIRD
Sbjct: 121 LPASEVPLRGRIYHETYGCQMNINDMEVVLSIMKNAGYSETVDIPETAEIIFINTCAIRD 180

Query: 181 NAEQKVWQRLNYFWFLKRQWKSNVAIGRSQSRHPPKVVVLGCMAERLKDKILDADKMVDV 240
           NAEQKVWQRLNYFWFLKRQWKSNVAIGRS+S+HPPKVVVLGCMAERLKDKILDADKMVDV
Sbjct: 181 NAEQKVWQRLNYFWFLKRQWKSNVAIGRSKSQHPPKVVVLGCMAERLKDKILDADKMVDV 240

Query: 241 VCGPDAYRDLPRLLDEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNM 300
           VCGPDAYRDLPRLLDEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNM
Sbjct: 241 VCGPDAYRDLPRLLDEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNM 300

Query: 301 CSFCIVPFTRGRERSRPVESIVCEVRELYGEGVKEVTLLGQNVNSYNDTTENADVEPGTN 360
           CSFCIVPFTRGRERSRPVESIVCEVRELY EGVKEVTLLGQNVNSYNDT ENADVEPGTN
Sbjct: 301 CSFCIVPFTRGRERSRPVESIVCEVRELYREGVKEVTLLGQNVNSYNDTAENADVEPGTN 360

Query: 361 WKLSDGFSTIAKVKKMGLRFSDLLDRLSTEFPEMRFRYTSPHPKDFPDEFLYLMRDRQNI 420
           WKLSDGFSTIAKVKKMGLRFSDLLDRLSTEFPEMRFRYTSPHPKDFPDEFLYLMRDR NI
Sbjct: 361 WKLSDGFSTIAKVKKMGLRFSDLLDRLSTEFPEMRFRYTSPHPKDFPDEFLYLMRDRHNI 420

Query: 421 CKSIHLPAQSGNSTVLERMRRGYTREAYLDLVHKIRSIIPDVGITSDFICGFCGETEEEH 480
           CKSIHLPAQSGNSTVLERMRRGYTREAYLDLVHKIRSIIPDVGITSDFICGFCGETEEEH
Sbjct: 421 CKSIHLPAQSGNSTVLERMRRGYTREAYLDLVHKIRSIIPDVGITSDFICGFCGETEEEH 480

Query: 481 ADTLSLINEVGYDMAYMFAYSMREKTHAHRNYVDDVPEEVKQRRLTELIETFRNSTGRCY 540
           ADTLSLI+EVGYDMAY+FAYSMREKTHAHRNYVDDVPEEVKQRRLTELIETFRNSTGRCY
Sbjct: 481 ADTLSLISEVGYDMAYLFAYSMREKTHAHRNYVDDVPEEVKQRRLTELIETFRNSTGRCY 540

Query: 541 DSQIGSVQLVLVEGPNKRAPETEMIGKSDRGHRVSFVNVAVPHRDGDYDGQRKAVVGDFV 600
           DSQIGSVQLVLVEGPNKRAPETEMIGKSDRGHRVSF+NVAVPHRDGDYDGQRKAVVGDFV
Sbjct: 541 DSQIGSVQLVLVEGPNKRAPETEMIGKSDRGHRVSFINVAVPHRDGDYDGQRKAVVGDFV 600

Query: 601 EVRISKSTRASLFGEALAITKLSSFYNSMDESIACVS 635
           EVRISKSTRASLFGEALAITKLSSFYNSMDESIACVS
Sbjct: 601 EVRISKSTRASLFGEALAITKLSSFYNSMDESIACVS 637

[Close]

BLAST of HG10019019 vs. NCBI nr
Match: XP_038887765.1 (CDK5RAP1-like protein isoform X1 [Benincasa hispida])

HSP 1 Score: 1209.9 bits (3129), Expect = 0.0e+00
Identity = 610/654 (93.27%), Postives = 621/654 (94.95%), Query Frame = 0


Query: 1   MGFHVLRAPPFSSSTTIIFKPTSSASILLKFGYALYSSPFSK---SSSSRTYFRASSANY 60
           MGF+VLRAPPFSSSTTII KPTSSAS+L KFGYALYSSPFSK   SSSSRTYFRASSA Y
Sbjct: 1   MGFYVLRAPPFSSSTTIILKPTSSASLLFKFGYALYSSPFSKFSSSSSSRTYFRASSARY 60

Query: 61  VASPATAIPLSGSFSRRTRSFRGGFIAATAAPGSVHKSEELRPSISPEKSWFQTQNGAE- 120
           VAS ATAIPLSGS  RRTRSFRGGFIAATAAPGSV+KSEEL+PSISPE+ W Q +NG E 
Sbjct: 61  VASTATAIPLSGSLPRRTRSFRGGFIAATAAPGSVYKSEELKPSISPEQPWVQRKNGTES 120

Query: 121 ----------------SLPASEVPLRGRIYHETYGCQMNINDMEVVLSIMKNAGYSETVD 180
                           SLPASEVPLRGRIYHETYGCQMNINDMEVVLSIMKNAGYSETVD
Sbjct: 121 SACLVEIGSQLRLIGRSLPASEVPLRGRIYHETYGCQMNINDMEVVLSIMKNAGYSETVD 180

Query: 181 IPETAEIIFINTCAIRDNAEQKVWQRLNYFWFLKRQWKSNVAIGRSQSRHPPKVVVLGCM 240
           IPETAEIIFINTCAIRDNAEQKVWQRLNYFWFLKRQWKSNVAIGRS+S+HPPKVVVLGCM
Sbjct: 181 IPETAEIIFINTCAIRDNAEQKVWQRLNYFWFLKRQWKSNVAIGRSKSQHPPKVVVLGCM 240

Query: 241 AERLKDKILDADKMVDVVCGPDAYRDLPRLLDEVDYGQKGINTLLSLEETYADISPVRIS 300
           AERLKDKILDADKMVDVVCGPDAYRDLPRLLDEVDYGQKGINTLLSLEETYADISPVRIS
Sbjct: 241 AERLKDKILDADKMVDVVCGPDAYRDLPRLLDEVDYGQKGINTLLSLEETYADISPVRIS 300

Query: 301 KNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVCEVRELYGEGVKEVTLLGQNV 360
           KNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVCEVRELY EGVKEVTLLGQNV
Sbjct: 301 KNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVCEVRELYREGVKEVTLLGQNV 360

Query: 361 NSYNDTTENADVEPGTNWKLSDGFSTIAKVKKMGLRFSDLLDRLSTEFPEMRFRYTSPHP 420
           NSYNDT ENADVEPGTNWKLSDGFSTIAKVKKMGLRFSDLLDRLSTEFPEMRFRYTSPHP
Sbjct: 361 NSYNDTAENADVEPGTNWKLSDGFSTIAKVKKMGLRFSDLLDRLSTEFPEMRFRYTSPHP 420

Query: 421 KDFPDEFLYLMRDRQNICKSIHLPAQSGNSTVLERMRRGYTREAYLDLVHKIRSIIPDVG 480
           KDFPDEFLYLMRDR NICKSIHLPAQSGNSTVLERMRRGYTREAYLDLVHKIRSIIPDVG
Sbjct: 421 KDFPDEFLYLMRDRHNICKSIHLPAQSGNSTVLERMRRGYTREAYLDLVHKIRSIIPDVG 480

Query: 481 ITSDFICGFCGETEEEHADTLSLINEVGYDMAYMFAYSMREKTHAHRNYVDDVPEEVKQR 540
           ITSDFICGFCGETEEEHADTLSLI+EVGYDMAY+FAYSMREKTHAHRNYVDDVPEEVKQR
Sbjct: 481 ITSDFICGFCGETEEEHADTLSLISEVGYDMAYLFAYSMREKTHAHRNYVDDVPEEVKQR 540

Query: 541 RLTELIETFRNSTGRCYDSQIGSVQLVLVEGPNKRAPETEMIGKSDRGHRVSFVNVAVPH 600
           RLTELIETFRNSTGRCYDSQIGSVQLVLVEGPNKRAPETEMIGKSDRGHRVSF+NVAVPH
Sbjct: 541 RLTELIETFRNSTGRCYDSQIGSVQLVLVEGPNKRAPETEMIGKSDRGHRVSFINVAVPH 600

Query: 601 RDGDYDGQRKAVVGDFVEVRISKSTRASLFGEALAITKLSSFYNSMDESIACVS 635
           RDGDYDGQRKAVVGDFVEVRISKSTRASLFGEALAITKLSSFYNSMDESIACVS
Sbjct: 601 RDGDYDGQRKAVVGDFVEVRISKSTRASLFGEALAITKLSSFYNSMDESIACVS 654

[Close]

BLAST of HG10019019 vs. NCBI nr
Match: XP_008449427.1 (PREDICTED: CDK5RAP1-like protein [Cucumis melo] >KAA0057321.1 CDK5RAP1-like protein [Cucumis melo var. makuwa] >TYK13413.1 CDK5RAP1-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 1179.9 bits (3051), Expect = 0.0e+00
Identity = 591/635 (93.07%), Postives = 601/635 (94.65%), Query Frame = 0


Query: 1   MGFHVLRAPPFSSSTTIIFKPTSSASILLKFGYALYSSPFSKSSSSR-TYFRASSANYVA 60
           MGFHVLRAPPFSSSTTIIFKPTSS   L KF YALYS PFSKSSSS  +YF  SS NYVA
Sbjct: 1   MGFHVLRAPPFSSSTTIIFKPTSS---LFKFRYALYSPPFSKSSSSSISYFLPSSPNYVA 60

Query: 61  SPATAIPLSGSFSRRTRSFRGGFIAATAAPGSVHKSEELRPSISPEKSWFQTQNGAESLP 120
           SP TAIPLSGSFSR TR FRGGFIAAT A GSV + EELRPSIS E+SW   QNG ESLP
Sbjct: 61  SPTTAIPLSGSFSRSTRRFRGGFIAATTASGSVQRLEELRPSISTEQSWVLRQNGTESLP 120

Query: 121 ASEVPLRGRIYHETYGCQMNINDMEVVLSIMKNAGYSETVDIPETAEIIFINTCAIRDNA 180
           AS+VP RGR+YHETYGCQMNINDMEVVLSIMK AGY ETVD PETAEIIFINTCAIRDNA
Sbjct: 121 ASDVPSRGRVYHETYGCQMNINDMEVVLSIMKKAGYGETVDTPETAEIIFINTCAIRDNA 180

Query: 181 EQKVWQRLNYFWFLKRQWKSNVAIGRSQSRHPPKVVVLGCMAERLKDKILDADKMVDVVC 240
           EQKVWQRLNYFWFLKRQWKSNVAIGRSQSRHPPKVVVLGCMAERLKDKILD+DKMVDVVC
Sbjct: 181 EQKVWQRLNYFWFLKRQWKSNVAIGRSQSRHPPKVVVLGCMAERLKDKILDSDKMVDVVC 240

Query: 241 GPDAYRDLPRLLDEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCS 300
           GPDAYRDLPRLLDEVDYGQKGINTLLSLEETYADISPVRI+KNSVTAFVSVMRGCNNMCS
Sbjct: 241 GPDAYRDLPRLLDEVDYGQKGINTLLSLEETYADISPVRIAKNSVTAFVSVMRGCNNMCS 300

Query: 301 FCIVPFTRGRERSRPVESIVCEVRELYGEGVKEVTLLGQNVNSYNDTTENADVEPGTNWK 360
           FCIVPFTRGRERSRPVESIVCEV+ELY EGVKEVTLLGQNVNSYNDTTENAD+EPGTNWK
Sbjct: 301 FCIVPFTRGRERSRPVESIVCEVKELYREGVKEVTLLGQNVNSYNDTTENADIEPGTNWK 360

Query: 361 LSDGFSTIAKVKKMGLRFSDLLDRLSTEFPEMRFRYTSPHPKDFPDEFLYLMRDRQNICK 420
           LSDGFSTIAKVKKMGLRFSDLLDRLSTEFPEMRFRYTSPHPKDFPDEFLYLMRDR NICK
Sbjct: 361 LSDGFSTIAKVKKMGLRFSDLLDRLSTEFPEMRFRYTSPHPKDFPDEFLYLMRDRHNICK 420

Query: 421 SIHLPAQSGNSTVLERMRRGYTREAYLDLVHKIRSIIPDVGITSDFICGFCGETEEEHAD 480
           SIHLPAQSGNS VLERMRRGYTREAYLDLVHKIRSIIPDVGITSDFICGFCGETEEEHAD
Sbjct: 421 SIHLPAQSGNSIVLERMRRGYTREAYLDLVHKIRSIIPDVGITSDFICGFCGETEEEHAD 480

Query: 481 TLSLINEVGYDMAYMFAYSMREKTHAHRNYVDDVPEEVKQRRLTELIETFRNSTGRCYDS 540
           TLSLINEVGYDMAYMFAYSMREKTHAHRNYVDD+PEEVKQRRLTELIE FRNSTGRCYDS
Sbjct: 481 TLSLINEVGYDMAYMFAYSMREKTHAHRNYVDDIPEEVKQRRLTELIEAFRNSTGRCYDS 540

Query: 541 QIGSVQLVLVEGPNKRAPETEMIGKSDRGHRVSFVNVAVPHRDGDYDGQRKAVVGDFVEV 600
           QIGSVQLVLVEGPNKRAPETEMIGKSDR HRVSFVNVAVPHRDGDYDG RKAVVGDFVEV
Sbjct: 541 QIGSVQLVLVEGPNKRAPETEMIGKSDRSHRVSFVNVAVPHRDGDYDGHRKAVVGDFVEV 600

Query: 601 RISKSTRASLFGEALAITKLSSFYNSMDESIACVS 635
           RISKSTRASLFGEALAITKLSSFYN MDESIACVS
Sbjct: 601 RISKSTRASLFGEALAITKLSSFYNRMDESIACVS 632

[Close]

BLAST of HG10019019 vs. NCBI nr
Match: XP_022927671.1 (CDK5RAP1-like protein [Cucurbita moschata])

HSP 1 Score: 1175.2 bits (3039), Expect = 0.0e+00
Identity = 582/634 (91.80%), Postives = 600/634 (94.64%), Query Frame = 0


Query: 1   MGFHVLRAPPFSSSTTIIFKPTSSASILLKFGYALYSSPFSKSSSSRTYFRASSANYVAS 60
           MG HVL +PPFSSST+IIFKPTSSAS+L KFGYAL  SP    SS+ TY R SS  YVAS
Sbjct: 1   MGLHVLISPPFSSSTSIIFKPTSSASLLFKFGYALSKSP----SSTTTYLRPSSLKYVAS 60

Query: 61  PATAIPLSGSFSRRTRSFRGGFIAATAAPGSVHKSEELRPSISPEKSWFQTQNGAESLPA 120
           P T+IPLSG FSRRTR F GGFIAATAAPGSV KSEELRPS+SP++SW Q QNG E L  
Sbjct: 61  PPTSIPLSGYFSRRTRRFHGGFIAATAAPGSVQKSEELRPSVSPDQSWVQRQNGIEPLTG 120

Query: 121 SEVPLRGRIYHETYGCQMNINDMEVVLSIMKNAGYSETVDIPETAEIIFINTCAIRDNAE 180
           SEVPLRGRIYHETYGCQMNINDMEVVLSIMKNAGYSETVD+PETAE+IFINTCAIRDNAE
Sbjct: 121 SEVPLRGRIYHETYGCQMNINDMEVVLSIMKNAGYSETVDVPETAEVIFINTCAIRDNAE 180

Query: 181 QKVWQRLNYFWFLKRQWKSNVAIGRSQSRHPPKVVVLGCMAERLKDKILDADKMVDVVCG 240
           QKVWQRLNYFWFLKR+WKSNVAIGRSQSRHPPKVVVLGCMAERLKDKILDADKMVDVVCG
Sbjct: 181 QKVWQRLNYFWFLKREWKSNVAIGRSQSRHPPKVVVLGCMAERLKDKILDADKMVDVVCG 240

Query: 241 PDAYRDLPRLLDEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSF 300
           PDAYRDLPRLLDEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSF
Sbjct: 241 PDAYRDLPRLLDEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSF 300

Query: 301 CIVPFTRGRERSRPVESIVCEVRELYGEGVKEVTLLGQNVNSYNDTTENADVEPGTNWKL 360
           CIVPFTRGRERSRPVESIV EVRELY EGVKEVTLLGQNVNSYNDT +N DVEPGTNWKL
Sbjct: 301 CIVPFTRGRERSRPVESIVSEVRELYREGVKEVTLLGQNVNSYNDTIDNTDVEPGTNWKL 360

Query: 361 SDGFSTIAKVKKMGLRFSDLLDRLSTEFPEMRFRYTSPHPKDFPDEFLYLMRDRQNICKS 420
           SDGFSTIAKVKKMGLRFSDLLDRLSTEFPEMRFRYTSPHPKDFPDEFLYLMRD+ NICKS
Sbjct: 361 SDGFSTIAKVKKMGLRFSDLLDRLSTEFPEMRFRYTSPHPKDFPDEFLYLMRDKHNICKS 420

Query: 421 IHLPAQSGNSTVLERMRRGYTREAYLDLVHKIRSIIPDVGITSDFICGFCGETEEEHADT 480
           IHLPAQSGNSTVLERMRRGYTRE YLDLVHKIRSIIPDVGITSDFICGFCGETEEEHADT
Sbjct: 421 IHLPAQSGNSTVLERMRRGYTREVYLDLVHKIRSIIPDVGITSDFICGFCGETEEEHADT 480

Query: 481 LSLINEVGYDMAYMFAYSMREKTHAHRNYVDDVPEEVKQRRLTELIETFRNSTGRCYDSQ 540
           LSLINEVGYDMAYMFAYSMREKTHAHRNYVDDVPE+VKQRRLTELIETFRNSTG+CYD Q
Sbjct: 481 LSLINEVGYDMAYMFAYSMREKTHAHRNYVDDVPEDVKQRRLTELIETFRNSTGQCYDMQ 540

Query: 541 IGSVQLVLVEGPNKRAPETEMIGKSDRGHRVSFVNVAVPHRDGDYDGQRKAVVGDFVEVR 600
           IGS+QLVLVEGPNKRAPETEMIGKSDRGHRVSFVNVAVPHRDGDYDGQRK  +GDFVEVR
Sbjct: 541 IGSIQLVLVEGPNKRAPETEMIGKSDRGHRVSFVNVAVPHRDGDYDGQRKVAIGDFVEVR 600

Query: 601 ISKSTRASLFGEALAITKLSSFYNSMDESIACVS 635
           ISKSTRASLFGEALA+TKLSSFYNSMDESIACVS
Sbjct: 601 ISKSTRASLFGEALAVTKLSSFYNSMDESIACVS 630

[Close]

BLAST of HG10019019 vs. NCBI nr
Match: KAG7022582.1 (CDK5RAP1-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1174.1 bits (3036), Expect = 0.0e+00
Identity = 581/634 (91.64%), Postives = 600/634 (94.64%), Query Frame = 0


Query: 1   MGFHVLRAPPFSSSTTIIFKPTSSASILLKFGYALYSSPFSKSSSSRTYFRASSANYVAS 60
           MG HVL +PPFSSST+IIFKPTSSAS+L KFGYAL     SKS S+ TY R SS  YVAS
Sbjct: 1   MGLHVLISPPFSSSTSIIFKPTSSASLLFKFGYAL-----SKSPSTTTYLRPSSLKYVAS 60

Query: 61  PATAIPLSGSFSRRTRSFRGGFIAATAAPGSVHKSEELRPSISPEKSWFQTQNGAESLPA 120
           P T++PLSG FSRRTR F GGFIAATAAPGSV KSEELRPS+SPE+SW Q QNG E L  
Sbjct: 61  PPTSVPLSGYFSRRTRRFHGGFIAATAAPGSVQKSEELRPSVSPEQSWVQRQNGIEPLTG 120

Query: 121 SEVPLRGRIYHETYGCQMNINDMEVVLSIMKNAGYSETVDIPETAEIIFINTCAIRDNAE 180
           SEVPLRGRIYHETYGCQMNINDMEVVLSIMKNAGYSETVD+PETAE+IFINTCAIRDNAE
Sbjct: 121 SEVPLRGRIYHETYGCQMNINDMEVVLSIMKNAGYSETVDVPETAEVIFINTCAIRDNAE 180

Query: 181 QKVWQRLNYFWFLKRQWKSNVAIGRSQSRHPPKVVVLGCMAERLKDKILDADKMVDVVCG 240
           QKVWQRLNYFWFLKR+WKSNVAIGRSQSRHPPKVVVLGCMAERLKDKILDADKMVDVVCG
Sbjct: 181 QKVWQRLNYFWFLKREWKSNVAIGRSQSRHPPKVVVLGCMAERLKDKILDADKMVDVVCG 240

Query: 241 PDAYRDLPRLLDEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSF 300
           PDAYRDLPRLLDEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSF
Sbjct: 241 PDAYRDLPRLLDEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSF 300

Query: 301 CIVPFTRGRERSRPVESIVCEVRELYGEGVKEVTLLGQNVNSYNDTTENADVEPGTNWKL 360
           CIVPFTRGRERSRPVESIV EVRELY EGVKEVTLLGQNVNSYNDT +N DVEPGTNWKL
Sbjct: 301 CIVPFTRGRERSRPVESIVSEVRELYREGVKEVTLLGQNVNSYNDTIDNTDVEPGTNWKL 360

Query: 361 SDGFSTIAKVKKMGLRFSDLLDRLSTEFPEMRFRYTSPHPKDFPDEFLYLMRDRQNICKS 420
           SDGFSTIAKVKKMGLRFSDLLDRLSTEFPEMRFRYTSPHPKDFPDEFLYLMRD+ NICKS
Sbjct: 361 SDGFSTIAKVKKMGLRFSDLLDRLSTEFPEMRFRYTSPHPKDFPDEFLYLMRDKHNICKS 420

Query: 421 IHLPAQSGNSTVLERMRRGYTREAYLDLVHKIRSIIPDVGITSDFICGFCGETEEEHADT 480
           IHLPAQSGNSTVLERMRRGYTRE YLDLVHKIRSIIPDVGITSDFICGFCGETEEEHADT
Sbjct: 421 IHLPAQSGNSTVLERMRRGYTREVYLDLVHKIRSIIPDVGITSDFICGFCGETEEEHADT 480

Query: 481 LSLINEVGYDMAYMFAYSMREKTHAHRNYVDDVPEEVKQRRLTELIETFRNSTGRCYDSQ 540
           LSLINEVGYDMAYMFAYSMREKTHAHRNYVDDVPE+VKQRRLTELIETFRNSTG+CYD Q
Sbjct: 481 LSLINEVGYDMAYMFAYSMREKTHAHRNYVDDVPEDVKQRRLTELIETFRNSTGQCYDMQ 540

Query: 541 IGSVQLVLVEGPNKRAPETEMIGKSDRGHRVSFVNVAVPHRDGDYDGQRKAVVGDFVEVR 600
           IGS+QLVLVEGPNKRAP+TEMIGKSDRGHRVSFVNVAVPHRDGDYDGQRK  +GDFVEVR
Sbjct: 541 IGSIQLVLVEGPNKRAPDTEMIGKSDRGHRVSFVNVAVPHRDGDYDGQRKVAIGDFVEVR 600

Query: 601 ISKSTRASLFGEALAITKLSSFYNSMDESIACVS 635
           ISKSTRASLFGEALA+TKLSSFYNSMDESIACVS
Sbjct: 601 ISKSTRASLFGEALAVTKLSSFYNSMDESIACVS 629

[Close]

BLAST of HG10019019 vs. ExPASy Swiss-Prot
Match: Q2R1U4 (CDK5RAP1-like protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os11g0592800 PE=2 SV=1)

HSP 1 Score: 832.0 bits (2148), Expect = 4.5e-240
Identity = 408/538 (75.84%), Postives = 463/538 (86.06%), Query Frame = 0


Query: 89  PGSVHKSEELRP-SISPEKSWFQTQNGAESLPASEVPLRGRIYHETYGCQMNINDMEVVL 148
           P  + +S   RP + S   +  + Q   ES P +    +GRIYHETYGCQMN+NDME+VL
Sbjct: 56  PRRLARSGPSRPLAASAATAVSEAQTDLESGPVT--ASKGRIYHETYGCQMNVNDMEIVL 115

Query: 149 SIMKNAGYSETVDIPETAEIIFINTCAIRDNAEQKVWQRLNYFWFLKRQWKSNVAIGRSQ 208
           SIMKN GY E V  PE+AEIIFINTCAIRDNAEQKVWQRLNYFWFLKRQWK+NVA GRS+
Sbjct: 116 SIMKNEGYDEIVPDPESAEIIFINTCAIRDNAEQKVWQRLNYFWFLKRQWKANVAAGRSR 175

Query: 209 SRHPPKVVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLDEVDYGQKGINTLLSL 268
           S  PPK+ VLGCMAERLK+KILD+DKMVDVVCGPDAYRDLPRLL EVDYGQKGINTLLSL
Sbjct: 176 SLRPPKIAVLGCMAERLKEKILDSDKMVDVVCGPDAYRDLPRLLQEVDYGQKGINTLLSL 235

Query: 269 EETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVCEVRELYG 328
           EETYADI+PVRIS NSVTAFVS+MRGCNNMCSFCIVPFTRGRERSRPV SIV EV EL+ 
Sbjct: 236 EETYADITPVRISDNSVTAFVSIMRGCNNMCSFCIVPFTRGRERSRPVSSIVREVGELWK 295

Query: 329 EGVKEVTLLGQNVNSYNDTTENADVEPGTNWKLSDGFSTIAKVKKMGLRFSDLLDRLSTE 388
            GVKEV LLGQNVNSYNDT+E  ++EPG NW+LS+GFS++ KVK MGLRF+DLLD+LS E
Sbjct: 296 AGVKEVMLLGQNVNSYNDTSEVEELEPGKNWELSEGFSSMCKVKNMGLRFADLLDQLSLE 355

Query: 389 FPEMRFRYTSPHPKDFPDEFLYLMRDRQNICKSIHLPAQSGNSTVLERMRRGYTREAYLD 448
           +PEMRFR+TSPHPKD+PDE LYLMRDR N+CK IH+PAQSG+S VLERMRRGYTREAYL+
Sbjct: 356 YPEMRFRFTSPHPKDYPDELLYLMRDRHNVCKLIHMPAQSGSSAVLERMRRGYTREAYLE 415

Query: 449 LVHKIRSIIPDVGITSDFICGFCGETEEEHADTLSLINEVGYDMAYMFAYSMREKTHAHR 508
           LV KIRSIIPDVG++SDFI GFCGETEEEHA+TL+L+  VGYDMAYMFAYSMREKTHAHR
Sbjct: 416 LVQKIRSIIPDVGLSSDFISGFCGETEEEHAETLTLVRAVGYDMAYMFAYSMREKTHAHR 475

Query: 509 NYVDDVPEEVKQRRLTELIETFRNSTGRCYDSQIGSVQLVLVEGPNKRAPETEMIGKSDR 568
           NYVDDVP++VKQRRL ELI TFR +T + YDSQ+G+VQLVLVEGPNKRAPETEMIGK+DR
Sbjct: 476 NYVDDVPDDVKQRRLAELISTFRETTAKIYDSQVGTVQLVLVEGPNKRAPETEMIGKTDR 535

Query: 569 GHRVSFVNVAVPHRDGDYDGQRKAVVGDFVEVRISKSTRASLFGEALAITKLSSFYNS 626
           GHRVSF +V VPH   + D  RK VVGDF+EV+I+KS+ ASL G+ +A T LS FY +
Sbjct: 536 GHRVSFASVPVPH-TFEGDELRKPVVGDFIEVKITKSSTASLSGDVIARTSLSKFYKN 590

[Close]

BLAST of HG10019019 vs. ExPASy Swiss-Prot
Match: Q8H0V1 (CDK5RAP1-like protein OS=Arabidopsis thaliana OX=3702 GN=At4g36390 PE=2 SV=1)

HSP 1 Score: 825.1 bits (2130), Expect = 5.5e-238
Identity = 425/615 (69.11%), Postives = 492/615 (80.00%), Query Frame = 0


Query: 16  TIIFKPTSSASILLKFGYALYSSPFSKSSSSRTYFRASSANYVASPATAIPLSGSFSRRT 75
           ++ FK ++     L+F  +  ++  S SSSS    R  S+ +  +        G     +
Sbjct: 20  SLCFKASTQRCFALRF-LSSKATHASSSSSSALLPRCRSSTHRLTQKPINRKKGFSLNLS 79

Query: 76  RSFRGGFIAATAA--PGSVHKSEELRPSISPEKSWFQTQNGAESLPASEVPLRGRIYHET 135
           RSF    IA++      S+H   +   +     S    +  +ES   S++  +GRIYHET
Sbjct: 80  RSFSISQIASSGKFDGPSLH---QFVSNAQAHASLTTPETESESTLDSDIASKGRIYHET 139

Query: 136 YGCQMNINDMEVVLSIMKNAGYSETVDIPETAEIIFINTCAIRDNAEQKVWQRLNYFWFL 195
           YGCQMNINDME+VL+IMKN+GY E V  PE+AE+IF+NTCAIR+NAEQ+VWQRLNYFWFL
Sbjct: 140 YGCQMNINDMEIVLAIMKNSGYKEVVTDPESAEVIFVNTCAIRENAEQRVWQRLNYFWFL 199

Query: 196 KRQWKSNVAIGRSQSRHPPKVVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLDE 255
           KR+WK N A GR++S  PPKVVVLGCMAERLKDKILD+DKMVDVVCGPDAYRDLPRLL+E
Sbjct: 200 KREWKVNAATGRAKSLKPPKVVVLGCMAERLKDKILDSDKMVDVVCGPDAYRDLPRLLEE 259

Query: 256 VDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSR 315
           VDYGQKGINTLLSLEETYADISPVRIS+NS+TAFVSVMRGCNNMC+FCIVPFTRGRERSR
Sbjct: 260 VDYGQKGINTLLSLEETYADISPVRISENSITAFVSVMRGCNNMCAFCIVPFTRGRERSR 319

Query: 316 PVESIVCEVRELYGEGVKEVTLLGQNVNSYNDTTENADVEPGTNWKLSDGFSTIAKVKKM 375
           PVESI+ EV EL+  GVKEVTLLGQNVNSYND  ++AD E G NW+ S+GFS+  KVK M
Sbjct: 320 PVESIIREVGELWESGVKEVTLLGQNVNSYND--DSADRESGANWEYSEGFSSRCKVKNM 379

Query: 376 GLRFSDLLDRLSTEFPEMRFRYTSPHPKDFPDEFLYLMRDRQNICKSIHLPAQSGNSTVL 435
           GLRF+DLLDRLS EFPEMRFR+TSPHPKD+PDE LYLMRDR NIC  IHLPAQSGNS +L
Sbjct: 380 GLRFADLLDRLSVEFPEMRFRFTSPHPKDYPDELLYLMRDRHNICNLIHLPAQSGNSRIL 439

Query: 436 ERMRRGYTREAYLDLVHKIRSIIPDVGITSDFICGFCGETEEEHADTLSLINEVGYDMAY 495
           E+MRRGYTREAYLDLV KIRSIIPDV ITSDFI GFCGETEEEH +TLSL+  VGYDMAY
Sbjct: 440 EQMRRGYTREAYLDLVKKIRSIIPDVAITSDFITGFCGETEEEHQETLSLVRAVGYDMAY 499

Query: 496 MFAYSMREKTHAHRNYVDDVPEEVKQRRLTELIETFRNSTGRCYDSQIGSVQLVLVEGPN 555
           MFAYSMREKTHAHRNY DDVPEEVKQRRLTELI+ FR +TG CYDSQ+GS QLVLVEGPN
Sbjct: 500 MFAYSMREKTHAHRNYTDDVPEEVKQRRLTELIDAFRETTGPCYDSQVGSTQLVLVEGPN 559

Query: 556 KRAPETEMIGKSDRGHRVSFVNVAVPHR----DGDYDGQRKAVVGDFVEVRISKSTRASL 615
           KRAPETE+IGK+D+GHRVSFV   +  +    DGD D +R   +GDFVEV+I KSTRASL
Sbjct: 560 KRAPETELIGKTDKGHRVSFVTKPLFDKACLLDGD-DLKRNPGIGDFVEVQIEKSTRASL 619

Query: 616 FGEALAITKLSSFYN 625
           FGEALAI+K+S F++
Sbjct: 620 FGEALAISKMSLFHD 627

[Close]

BLAST of HG10019019 vs. ExPASy Swiss-Prot
Match: Q9JLH6 (Mitochondrial tRNA methylthiotransferase CDK5RAP1 OS=Rattus norvegicus OX=10116 GN=Cdk5rap1 PE=1 SV=1)

HSP 1 Score: 515.0 bits (1325), Expect = 1.2e-144
Identity = 272/507 (53.65%), Postives = 358/507 (70.61%), Query Frame = 0


Query: 128 RIYHETYGCQMNINDMEVVLSIMKNAGYSETVDIPETAEIIFINTCAIRDNAEQKVWQRL 187
           ++Y ETYGCQMN+ND E+  SI++ +GY  T ++ E A++I + TC+IR+ AEQ +W RL
Sbjct: 98  KVYLETYGCQMNVNDTEIAWSILQKSGYLRTSNLQE-ADVILLVTCSIREKAEQTIWNRL 157

Query: 188 NYFWFLKRQWKSNVAIGRSQSRHPPKVVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 247
           +    LK +        R +SR P ++ +LGCMAERLK +IL+ +KMVD++ GPDAYRDL
Sbjct: 158 HQLKVLKAK--------RPRSRVPLRIGILGCMAERLKGEILNREKMVDLLAGPDAYRDL 217

Query: 248 PRLLDEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 307
           PRLL  V+ GQ+  N LLSL+ETYADI PV+ S ++ +AFVS+MRGC+NMCS+CIVPFTR
Sbjct: 218 PRLLAVVESGQQAANVLLSLDETYADIMPVQTSPSATSAFVSIMRGCDNMCSYCIVPFTR 277

Query: 308 GRERSRPVESIVCEVRELYGEGVKEVTLLGQNVNSYNDTTENADVEPGTNWKLSDGFSTI 367
           GRERSRPV SI+ EVR+L  +G+KEVTLLGQNVNS+ D +E      G+   LS GF+T 
Sbjct: 278 GRERSRPVASILDEVRKLSEQGLKEVTLLGQNVNSFRDNSEVQFSSTGSA-NLSRGFTTN 337

Query: 368 AKVKKMGLRFSDLLDRLSTEFPEMRFRYTSPHPKDFPDEFLYLMRDRQNICKSIHLPAQS 427
            K K+ GLRFS LLD++S   PEMR R+TSPHPKDFPDE L L+R+R NICK IHLPAQS
Sbjct: 338 YKPKQGGLRFSHLLDQVSRIDPEMRIRFTSPHPKDFPDEVLQLIRERHNICKQIHLPAQS 397

Query: 428 GNSTVLERMRRGYTREAYLDLVHKIRSIIPDVGITSDFICGFCGETEEEHADTLSLINEV 487
           G+S VLE MRRGY+REAY+ LVH IR  IP VG++SDFI GFCGETE++H  T+SL+ EV
Sbjct: 398 GSSRVLEAMRRGYSREAYVALVHHIREAIPGVGLSSDFITGFCGETEDDHLQTVSLLREV 457

Query: 488 GYDMAYMFAYSMREKTHAHRNYVDDVPEEVKQRRLTELIETFRNSTGRCYDSQIGSVQLV 547
            Y+  ++FAYSMR+KT A+    DDVPEEVK RRL ELI  FR    +   + +G  QLV
Sbjct: 458 QYNTGFLFAYSMRQKTRAYHRLKDDVPEEVKLRRLEELITVFREEASKVNATSVGCTQLV 517

Query: 548 LVEGPNKRAPETEMIGKSDRGHRVSFVNVAVPHRDGDYDGQRKAVVGDFVEVRISKSTRA 607
           LVEG +KR+  T++ G++D   +V F +  V     D   + +A  GD+V V+I  ++  
Sbjct: 518 LVEGFSKRS-TTDLCGRNDANLKVIFPDAEVEDIT-DPGLKVRAQPGDYVLVKIISASSQ 577

Query: 608 SLFGEALAITKLSSFYNSMDESIACVS 635
           +L G  L  T +       D S+ C++
Sbjct: 578 TLKGHILCRTTMK------DSSMNCLT 586

[Close]

BLAST of HG10019019 vs. ExPASy Swiss-Prot
Match: Q8BTW8 (Mitochondrial tRNA methylthiotransferase CDK5RAP1 OS=Mus musculus OX=10090 GN=Cdk5rap1 PE=1 SV=2)

HSP 1 Score: 511.5 bits (1316), Expect = 1.3e-143
Identity = 267/493 (54.16%), Postives = 353/493 (71.60%), Query Frame = 0


Query: 128 RIYHETYGCQMNINDMEVVLSIMKNAGYSETVDIPETAEIIFINTCAIRDNAEQKVWQRL 187
           ++Y ETYGCQMN+ND E+  SI++ +GY  T ++ E A++I + TC+IR+ AEQ +W RL
Sbjct: 100 KVYLETYGCQMNVNDTEIAWSILQKSGYLRTSNLQE-ADVILLVTCSIREKAEQTIWNRL 159

Query: 188 NYFWFLKRQWKSNVAIGRSQSRHPPKVVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 247
           +    LK +        R +SR P ++ +LGCMAERLK +IL+ +KMVD++ GPDAYRDL
Sbjct: 160 HQLKVLKTK--------RPRSRVPLRIGILGCMAERLKGEILNREKMVDLLAGPDAYRDL 219

Query: 248 PRLLDEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 307
           PRLL  V+ GQ+  N LLSL+ETYADI PV+ S ++ +AFVS+MRGC+NMCS+CIVPFTR
Sbjct: 220 PRLLAVVESGQQAANVLLSLDETYADIMPVQTSPSATSAFVSIMRGCDNMCSYCIVPFTR 279

Query: 308 GRERSRPVESIVCEVRELYGEGVKEVTLLGQNVNSYNDTTENADVEPGTNWKLSDGFSTI 367
           GRERSRPV SI+ EVR+L  +G+KEVTLLGQNVNS+ D +E      G+   LS GF+T 
Sbjct: 280 GRERSRPVASILDEVRKLSEQGLKEVTLLGQNVNSFRDNSEVQFNNAGSA-NLSRGFTTN 339

Query: 368 AKVKKMGLRFSDLLDRLSTEFPEMRFRYTSPHPKDFPDEFLYLMRDRQNICKSIHLPAQS 427
            K K+ GLRFS LLD++S   PEMR R+TSPHPKDFPDE L L+R+R NICK IHLPAQS
Sbjct: 340 YKPKQGGLRFSHLLDQVSRIDPEMRIRFTSPHPKDFPDEVLQLIRERHNICKQIHLPAQS 399

Query: 428 GNSTVLERMRRGYTREAYLDLVHKIRSIIPDVGITSDFICGFCGETEEEHADTLSLINEV 487
           G+S VL+ MRRGY+REAY+ LVH +R  IP V ++SDFI GFCGETE++H  T+SL+ EV
Sbjct: 400 GSSRVLDAMRRGYSREAYVALVHHVRETIPGVSLSSDFITGFCGETEDDHRQTVSLLREV 459

Query: 488 GYDMAYMFAYSMREKTHAHRNYVDDVPEEVKQRRLTELIETFRNSTGRCYDSQIGSVQLV 547
            Y+  ++FAYSMR+KT A+    DDVPEEVK RRL ELI  FR    +   + +G  QLV
Sbjct: 460 QYNTGFLFAYSMRQKTRAYHRLKDDVPEEVKLRRLEELITVFREEASKANKTSVGCSQLV 519

Query: 548 LVEGPNKRAPETEMIGKSDRGHRVSFVNVAVPHRDGDYDGQR-KAVVGDFVEVRISKSTR 607
           LVEG +KR+  T++ G++D   +V F +  V   D    G + +A  GD+V V+I+ ++ 
Sbjct: 520 LVEGFSKRS-TTDLCGRNDANLKVIFPDAEV--EDITNPGLKVRAQPGDYVLVKITSASS 579

Query: 608 ASLFGEALAITKL 620
            +L G  L  T +
Sbjct: 580 QTLKGHILCRTTM 579

[Close]

BLAST of HG10019019 vs. ExPASy Swiss-Prot
Match: Q9VGZ1 (CDK5RAP1-like protein OS=Drosophila melanogaster OX=7227 GN=CG6345 PE=2 SV=1)

HSP 1 Score: 511.1 bits (1315), Expect = 1.7e-143
Identity = 259/498 (52.01%), Postives = 344/498 (69.08%), Query Frame = 0


Query: 128 RIYHETYGCQMNINDMEVVLSIMKNAGYSETVDIPETAEIIFINTCAIRDNAEQKVWQRL 187
           +++ E YGCQMN ND EVV SI+K  GY    + PE A++I + TCA+RD AEQ++  RL
Sbjct: 93  KVHFEVYGCQMNTNDTEVVFSILKENGYLRCQE-PEEADVIMLVTCAVRDGAEQRIRNRL 152

Query: 188 NYFWFLKRQWKSNVAIGRSQSRHPPKVVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 247
            +   +K +        RS  RHP ++ +LGCMAERLK+K+L+ ++ VDV+ GPD+Y+DL
Sbjct: 153 KHLRAMKNK--------RSTRRHPLQLTLLGCMAERLKEKLLEQEQCVDVIAGPDSYKDL 212

Query: 248 PRLLD-EVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFT 307
           PRLL     YG   IN LLSL+ETYAD+ PVR++  S TAFVS+MRGC+NMC++CIVPFT
Sbjct: 213 PRLLAISRHYGNSAINVLLSLDETYADVMPVRLNSESPTAFVSIMRGCDNMCTYCIVPFT 272

Query: 308 RGRERSRPVESIVCEVRELYGEGVKEVTLLGQNVNSYNDTTENADVEPGTNWKLSDGFST 367
           RGRERSRP+ SIV EV+ L  +GVKEVTLLGQNVNSY D T   + +         GFST
Sbjct: 273 RGRERSRPLASIVAEVKALAEQGVKEVTLLGQNVNSYRDRTAQEE-QDSLKATPVPGFST 332

Query: 368 IAKVKKMGLRFSDLLDRLSTEFPEMRFRYTSPHPKDFPDEFLYLMRDRQNICKSIHLPAQ 427
           + K K  G  F+ LL  ++   P+MR R+TSPHPKDF DE L ++RD  N+CK +HLPAQ
Sbjct: 333 VYKPKTGGTPFAALLRSVAQAVPDMRIRFTSPHPKDFSDEVLEVIRDHPNVCKQLHLPAQ 392

Query: 428 SGNSTVLERMRRGYTREAYLDLVHKIRSIIPDVGITSDFICGFCGETEEEHADTLSLINE 487
           SGN+ VLERMRRGY+REAYL+LV  IR  +P+VG++SDFICGFCGETEEE  DT+SLI +
Sbjct: 393 SGNTQVLERMRRGYSREAYLELVQHIRQFLPNVGLSSDFICGFCGETEEEFQDTVSLIQQ 452

Query: 488 VGYDMAYMFAYSMREKTHAHRNYVDDVPEEVKQRRLTELIETFRNSTGRCYDSQIGSVQL 547
           V Y++AY+FAYSMREKT AHR Y DDVP  VK  RL  +++ FR    + +    G  QL
Sbjct: 453 VQYNVAYLFAYSMREKTTAHRRYKDDVPINVKNERLQRMVQVFREGATQLHRKMEGQEQL 512

Query: 548 VLVEGPNKRAPETEMIGKSDRGHRVSFVNVAVPHRDGDYDGQRKAVVGDFVEVRISKSTR 607
           +L+EG +KR+ +    G++D   +V   ++ VP   GD   ++   VGDF+ VRI +S  
Sbjct: 513 ILIEGKSKRS-DAHWFGRNDANIKVIVPSIYVP-ISGDSTARKSFGVGDFLAVRIEESNS 572

Query: 608 ASLFGEALAITKLSSFYN 625
             L G  L ++ ++ F++
Sbjct: 573 QVLKGTPLELSNITDFHS 578

[Close]

BLAST of HG10019019 vs. ExPASy TrEMBL
Match: A0A5D3CNB2 (CDK5RAP1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold496G00300 PE=3 SV=1)

HSP 1 Score: 1179.9 bits (3051), Expect = 0.0e+00
Identity = 591/635 (93.07%), Postives = 601/635 (94.65%), Query Frame = 0


Query: 1   MGFHVLRAPPFSSSTTIIFKPTSSASILLKFGYALYSSPFSKSSSSR-TYFRASSANYVA 60
           MGFHVLRAPPFSSSTTIIFKPTSS   L KF YALYS PFSKSSSS  +YF  SS NYVA
Sbjct: 1   MGFHVLRAPPFSSSTTIIFKPTSS---LFKFRYALYSPPFSKSSSSSISYFLPSSPNYVA 60

Query: 61  SPATAIPLSGSFSRRTRSFRGGFIAATAAPGSVHKSEELRPSISPEKSWFQTQNGAESLP 120
           SP TAIPLSGSFSR TR FRGGFIAAT A GSV + EELRPSIS E+SW   QNG ESLP
Sbjct: 61  SPTTAIPLSGSFSRSTRRFRGGFIAATTASGSVQRLEELRPSISTEQSWVLRQNGTESLP 120

Query: 121 ASEVPLRGRIYHETYGCQMNINDMEVVLSIMKNAGYSETVDIPETAEIIFINTCAIRDNA 180
           AS+VP RGR+YHETYGCQMNINDMEVVLSIMK AGY ETVD PETAEIIFINTCAIRDNA
Sbjct: 121 ASDVPSRGRVYHETYGCQMNINDMEVVLSIMKKAGYGETVDTPETAEIIFINTCAIRDNA 180

Query: 181 EQKVWQRLNYFWFLKRQWKSNVAIGRSQSRHPPKVVVLGCMAERLKDKILDADKMVDVVC 240
           EQKVWQRLNYFWFLKRQWKSNVAIGRSQSRHPPKVVVLGCMAERLKDKILD+DKMVDVVC
Sbjct: 181 EQKVWQRLNYFWFLKRQWKSNVAIGRSQSRHPPKVVVLGCMAERLKDKILDSDKMVDVVC 240

Query: 241 GPDAYRDLPRLLDEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCS 300
           GPDAYRDLPRLLDEVDYGQKGINTLLSLEETYADISPVRI+KNSVTAFVSVMRGCNNMCS
Sbjct: 241 GPDAYRDLPRLLDEVDYGQKGINTLLSLEETYADISPVRIAKNSVTAFVSVMRGCNNMCS 300

Query: 301 FCIVPFTRGRERSRPVESIVCEVRELYGEGVKEVTLLGQNVNSYNDTTENADVEPGTNWK 360
           FCIVPFTRGRERSRPVESIVCEV+ELY EGVKEVTLLGQNVNSYNDTTENAD+EPGTNWK
Sbjct: 301 FCIVPFTRGRERSRPVESIVCEVKELYREGVKEVTLLGQNVNSYNDTTENADIEPGTNWK 360

Query: 361 LSDGFSTIAKVKKMGLRFSDLLDRLSTEFPEMRFRYTSPHPKDFPDEFLYLMRDRQNICK 420
           LSDGFSTIAKVKKMGLRFSDLLDRLSTEFPEMRFRYTSPHPKDFPDEFLYLMRDR NICK
Sbjct: 361 LSDGFSTIAKVKKMGLRFSDLLDRLSTEFPEMRFRYTSPHPKDFPDEFLYLMRDRHNICK 420

Query: 421 SIHLPAQSGNSTVLERMRRGYTREAYLDLVHKIRSIIPDVGITSDFICGFCGETEEEHAD 480
           SIHLPAQSGNS VLERMRRGYTREAYLDLVHKIRSIIPDVGITSDFICGFCGETEEEHAD
Sbjct: 421 SIHLPAQSGNSIVLERMRRGYTREAYLDLVHKIRSIIPDVGITSDFICGFCGETEEEHAD 480

Query: 481 TLSLINEVGYDMAYMFAYSMREKTHAHRNYVDDVPEEVKQRRLTELIETFRNSTGRCYDS 540
           TLSLINEVGYDMAYMFAYSMREKTHAHRNYVDD+PEEVKQRRLTELIE FRNSTGRCYDS
Sbjct: 481 TLSLINEVGYDMAYMFAYSMREKTHAHRNYVDDIPEEVKQRRLTELIEAFRNSTGRCYDS 540

Query: 541 QIGSVQLVLVEGPNKRAPETEMIGKSDRGHRVSFVNVAVPHRDGDYDGQRKAVVGDFVEV 600
           QIGSVQLVLVEGPNKRAPETEMIGKSDR HRVSFVNVAVPHRDGDYDG RKAVVGDFVEV
Sbjct: 541 QIGSVQLVLVEGPNKRAPETEMIGKSDRSHRVSFVNVAVPHRDGDYDGHRKAVVGDFVEV 600

Query: 601 RISKSTRASLFGEALAITKLSSFYNSMDESIACVS 635
           RISKSTRASLFGEALAITKLSSFYN MDESIACVS
Sbjct: 601 RISKSTRASLFGEALAITKLSSFYNRMDESIACVS 632

[Close]

BLAST of HG10019019 vs. ExPASy TrEMBL
Match: A0A1S3BLE1 (CDK5RAP1-like protein OS=Cucumis melo OX=3656 GN=LOC103491318 PE=3 SV=1)

HSP 1 Score: 1179.9 bits (3051), Expect = 0.0e+00
Identity = 591/635 (93.07%), Postives = 601/635 (94.65%), Query Frame = 0


Query: 1   MGFHVLRAPPFSSSTTIIFKPTSSASILLKFGYALYSSPFSKSSSSR-TYFRASSANYVA 60
           MGFHVLRAPPFSSSTTIIFKPTSS   L KF YALYS PFSKSSSS  +YF  SS NYVA
Sbjct: 1   MGFHVLRAPPFSSSTTIIFKPTSS---LFKFRYALYSPPFSKSSSSSISYFLPSSPNYVA 60

Query: 61  SPATAIPLSGSFSRRTRSFRGGFIAATAAPGSVHKSEELRPSISPEKSWFQTQNGAESLP 120
           SP TAIPLSGSFSR TR FRGGFIAAT A GSV + EELRPSIS E+SW   QNG ESLP
Sbjct: 61  SPTTAIPLSGSFSRSTRRFRGGFIAATTASGSVQRLEELRPSISTEQSWVLRQNGTESLP 120

Query: 121 ASEVPLRGRIYHETYGCQMNINDMEVVLSIMKNAGYSETVDIPETAEIIFINTCAIRDNA 180
           AS+VP RGR+YHETYGCQMNINDMEVVLSIMK AGY ETVD PETAEIIFINTCAIRDNA
Sbjct: 121 ASDVPSRGRVYHETYGCQMNINDMEVVLSIMKKAGYGETVDTPETAEIIFINTCAIRDNA 180

Query: 181 EQKVWQRLNYFWFLKRQWKSNVAIGRSQSRHPPKVVVLGCMAERLKDKILDADKMVDVVC 240
           EQKVWQRLNYFWFLKRQWKSNVAIGRSQSRHPPKVVVLGCMAERLKDKILD+DKMVDVVC
Sbjct: 181 EQKVWQRLNYFWFLKRQWKSNVAIGRSQSRHPPKVVVLGCMAERLKDKILDSDKMVDVVC 240

Query: 241 GPDAYRDLPRLLDEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCS 300
           GPDAYRDLPRLLDEVDYGQKGINTLLSLEETYADISPVRI+KNSVTAFVSVMRGCNNMCS
Sbjct: 241 GPDAYRDLPRLLDEVDYGQKGINTLLSLEETYADISPVRIAKNSVTAFVSVMRGCNNMCS 300

Query: 301 FCIVPFTRGRERSRPVESIVCEVRELYGEGVKEVTLLGQNVNSYNDTTENADVEPGTNWK 360
           FCIVPFTRGRERSRPVESIVCEV+ELY EGVKEVTLLGQNVNSYNDTTENAD+EPGTNWK
Sbjct: 301 FCIVPFTRGRERSRPVESIVCEVKELYREGVKEVTLLGQNVNSYNDTTENADIEPGTNWK 360

Query: 361 LSDGFSTIAKVKKMGLRFSDLLDRLSTEFPEMRFRYTSPHPKDFPDEFLYLMRDRQNICK 420
           LSDGFSTIAKVKKMGLRFSDLLDRLSTEFPEMRFRYTSPHPKDFPDEFLYLMRDR NICK
Sbjct: 361 LSDGFSTIAKVKKMGLRFSDLLDRLSTEFPEMRFRYTSPHPKDFPDEFLYLMRDRHNICK 420

Query: 421 SIHLPAQSGNSTVLERMRRGYTREAYLDLVHKIRSIIPDVGITSDFICGFCGETEEEHAD 480
           SIHLPAQSGNS VLERMRRGYTREAYLDLVHKIRSIIPDVGITSDFICGFCGETEEEHAD
Sbjct: 421 SIHLPAQSGNSIVLERMRRGYTREAYLDLVHKIRSIIPDVGITSDFICGFCGETEEEHAD 480

Query: 481 TLSLINEVGYDMAYMFAYSMREKTHAHRNYVDDVPEEVKQRRLTELIETFRNSTGRCYDS 540
           TLSLINEVGYDMAYMFAYSMREKTHAHRNYVDD+PEEVKQRRLTELIE FRNSTGRCYDS
Sbjct: 481 TLSLINEVGYDMAYMFAYSMREKTHAHRNYVDDIPEEVKQRRLTELIEAFRNSTGRCYDS 540

Query: 541 QIGSVQLVLVEGPNKRAPETEMIGKSDRGHRVSFVNVAVPHRDGDYDGQRKAVVGDFVEV 600
           QIGSVQLVLVEGPNKRAPETEMIGKSDR HRVSFVNVAVPHRDGDYDG RKAVVGDFVEV
Sbjct: 541 QIGSVQLVLVEGPNKRAPETEMIGKSDRSHRVSFVNVAVPHRDGDYDGHRKAVVGDFVEV 600

Query: 601 RISKSTRASLFGEALAITKLSSFYNSMDESIACVS 635
           RISKSTRASLFGEALAITKLSSFYN MDESIACVS
Sbjct: 601 RISKSTRASLFGEALAITKLSSFYNRMDESIACVS 632

[Close]

BLAST of HG10019019 vs. ExPASy TrEMBL
Match: A0A6J1EIA8 (CDK5RAP1-like protein OS=Cucurbita moschata OX=3662 GN=LOC111434491 PE=3 SV=1)

HSP 1 Score: 1175.2 bits (3039), Expect = 0.0e+00
Identity = 582/634 (91.80%), Postives = 600/634 (94.64%), Query Frame = 0


Query: 1   MGFHVLRAPPFSSSTTIIFKPTSSASILLKFGYALYSSPFSKSSSSRTYFRASSANYVAS 60
           MG HVL +PPFSSST+IIFKPTSSAS+L KFGYAL  SP    SS+ TY R SS  YVAS
Sbjct: 1   MGLHVLISPPFSSSTSIIFKPTSSASLLFKFGYALSKSP----SSTTTYLRPSSLKYVAS 60

Query: 61  PATAIPLSGSFSRRTRSFRGGFIAATAAPGSVHKSEELRPSISPEKSWFQTQNGAESLPA 120
           P T+IPLSG FSRRTR F GGFIAATAAPGSV KSEELRPS+SP++SW Q QNG E L  
Sbjct: 61  PPTSIPLSGYFSRRTRRFHGGFIAATAAPGSVQKSEELRPSVSPDQSWVQRQNGIEPLTG 120

Query: 121 SEVPLRGRIYHETYGCQMNINDMEVVLSIMKNAGYSETVDIPETAEIIFINTCAIRDNAE 180
           SEVPLRGRIYHETYGCQMNINDMEVVLSIMKNAGYSETVD+PETAE+IFINTCAIRDNAE
Sbjct: 121 SEVPLRGRIYHETYGCQMNINDMEVVLSIMKNAGYSETVDVPETAEVIFINTCAIRDNAE 180

Query: 181 QKVWQRLNYFWFLKRQWKSNVAIGRSQSRHPPKVVVLGCMAERLKDKILDADKMVDVVCG 240
           QKVWQRLNYFWFLKR+WKSNVAIGRSQSRHPPKVVVLGCMAERLKDKILDADKMVDVVCG
Sbjct: 181 QKVWQRLNYFWFLKREWKSNVAIGRSQSRHPPKVVVLGCMAERLKDKILDADKMVDVVCG 240

Query: 241 PDAYRDLPRLLDEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSF 300
           PDAYRDLPRLLDEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSF
Sbjct: 241 PDAYRDLPRLLDEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSF 300

Query: 301 CIVPFTRGRERSRPVESIVCEVRELYGEGVKEVTLLGQNVNSYNDTTENADVEPGTNWKL 360
           CIVPFTRGRERSRPVESIV EVRELY EGVKEVTLLGQNVNSYNDT +N DVEPGTNWKL
Sbjct: 301 CIVPFTRGRERSRPVESIVSEVRELYREGVKEVTLLGQNVNSYNDTIDNTDVEPGTNWKL 360

Query: 361 SDGFSTIAKVKKMGLRFSDLLDRLSTEFPEMRFRYTSPHPKDFPDEFLYLMRDRQNICKS 420
           SDGFSTIAKVKKMGLRFSDLLDRLSTEFPEMRFRYTSPHPKDFPDEFLYLMRD+ NICKS
Sbjct: 361 SDGFSTIAKVKKMGLRFSDLLDRLSTEFPEMRFRYTSPHPKDFPDEFLYLMRDKHNICKS 420

Query: 421 IHLPAQSGNSTVLERMRRGYTREAYLDLVHKIRSIIPDVGITSDFICGFCGETEEEHADT 480
           IHLPAQSGNSTVLERMRRGYTRE YLDLVHKIRSIIPDVGITSDFICGFCGETEEEHADT
Sbjct: 421 IHLPAQSGNSTVLERMRRGYTREVYLDLVHKIRSIIPDVGITSDFICGFCGETEEEHADT 480

Query: 481 LSLINEVGYDMAYMFAYSMREKTHAHRNYVDDVPEEVKQRRLTELIETFRNSTGRCYDSQ 540
           LSLINEVGYDMAYMFAYSMREKTHAHRNYVDDVPE+VKQRRLTELIETFRNSTG+CYD Q
Sbjct: 481 LSLINEVGYDMAYMFAYSMREKTHAHRNYVDDVPEDVKQRRLTELIETFRNSTGQCYDMQ 540

Query: 541 IGSVQLVLVEGPNKRAPETEMIGKSDRGHRVSFVNVAVPHRDGDYDGQRKAVVGDFVEVR 600
           IGS+QLVLVEGPNKRAPETEMIGKSDRGHRVSFVNVAVPHRDGDYDGQRK  +GDFVEVR
Sbjct: 541 IGSIQLVLVEGPNKRAPETEMIGKSDRGHRVSFVNVAVPHRDGDYDGQRKVAIGDFVEVR 600

Query: 601 ISKSTRASLFGEALAITKLSSFYNSMDESIACVS 635
           ISKSTRASLFGEALA+TKLSSFYNSMDESIACVS
Sbjct: 601 ISKSTRASLFGEALAVTKLSSFYNSMDESIACVS 630

[Close]

BLAST of HG10019019 vs. ExPASy TrEMBL
Match: A0A6J1JMU5 (CDK5RAP1-like protein OS=Cucurbita maxima OX=3661 GN=LOC111486642 PE=3 SV=1)

HSP 1 Score: 1172.9 bits (3033), Expect = 0.0e+00
Identity = 581/634 (91.64%), Postives = 599/634 (94.48%), Query Frame = 0


Query: 1   MGFHVLRAPPFSSSTTIIFKPTSSASILLKFGYALYSSPFSKSSSSRTYFRASSANYVAS 60
           MG HVLRAPPFSSST+IIFKPTSSAS+L KFGYA     F+  SS+RTYFR SS  YVAS
Sbjct: 1   MGLHVLRAPPFSSSTSIIFKPTSSASLLFKFGYA-----FNSPSSTRTYFRVSSLKYVAS 60

Query: 61  PATAIPLSGSFSRRTRSFRGGFIAATAAPGSVHKSEELRPSISPEKSWFQTQNGAESLPA 120
           P T+IPLSG FSRRTR F GGFIAATAAPGSV KSEELRPS+SP++SW Q QNG E L  
Sbjct: 61  PPTSIPLSGYFSRRTRRFHGGFIAATAAPGSVKKSEELRPSVSPDQSWVQRQNGIEPLTG 120

Query: 121 SEVPLRGRIYHETYGCQMNINDMEVVLSIMKNAGYSETVDIPETAEIIFINTCAIRDNAE 180
           SEVPLRGRIYHETYGCQMNINDMEVVLSIMKNAGYSETVD+PETAE+IFINTCAIRDNAE
Sbjct: 121 SEVPLRGRIYHETYGCQMNINDMEVVLSIMKNAGYSETVDVPETAEVIFINTCAIRDNAE 180

Query: 181 QKVWQRLNYFWFLKRQWKSNVAIGRSQSRHPPKVVVLGCMAERLKDKILDADKMVDVVCG 240
           QKVWQRLNYFWFLKR+WKSNVAIGRSQSRHPPKVVVLGCMAERLKDKILDADKMVDVVCG
Sbjct: 181 QKVWQRLNYFWFLKREWKSNVAIGRSQSRHPPKVVVLGCMAERLKDKILDADKMVDVVCG 240

Query: 241 PDAYRDLPRLLDEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSF 300
           PDAYRDLPRLLDEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSF
Sbjct: 241 PDAYRDLPRLLDEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSF 300

Query: 301 CIVPFTRGRERSRPVESIVCEVRELYGEGVKEVTLLGQNVNSYNDTTENADVEPGTNWKL 360
           CIVPFTRGRERSRPVESIV EVRELY EGVKEVTLLGQNVNSYND  +N DVEPGTNWKL
Sbjct: 301 CIVPFTRGRERSRPVESIVSEVRELYREGVKEVTLLGQNVNSYNDIIDNTDVEPGTNWKL 360

Query: 361 SDGFSTIAKVKKMGLRFSDLLDRLSTEFPEMRFRYTSPHPKDFPDEFLYLMRDRQNICKS 420
           SDGFSTIAKVKKMGLRFSDLLDRLSTEFPEMRFRYTSPHPKDFPDEFLYLMRD+ NICKS
Sbjct: 361 SDGFSTIAKVKKMGLRFSDLLDRLSTEFPEMRFRYTSPHPKDFPDEFLYLMRDKHNICKS 420

Query: 421 IHLPAQSGNSTVLERMRRGYTREAYLDLVHKIRSIIPDVGITSDFICGFCGETEEEHADT 480
           IHLPAQSGNSTVLERMRRGYTRE YLDLVHKIRSIIPDVGITSDFICGFCGETEEEHADT
Sbjct: 421 IHLPAQSGNSTVLERMRRGYTREVYLDLVHKIRSIIPDVGITSDFICGFCGETEEEHADT 480

Query: 481 LSLINEVGYDMAYMFAYSMREKTHAHRNYVDDVPEEVKQRRLTELIETFRNSTGRCYDSQ 540
           LSLI EVGYDMAYMFAYSMREKTHAHRNYVDDVPEEVKQRRLTELIETFRNSTG+CYD Q
Sbjct: 481 LSLIKEVGYDMAYMFAYSMREKTHAHRNYVDDVPEEVKQRRLTELIETFRNSTGQCYDMQ 540

Query: 541 IGSVQLVLVEGPNKRAPETEMIGKSDRGHRVSFVNVAVPHRDGDYDGQRKAVVGDFVEVR 600
           IGS+QLVLVEGPNKRA ETEMIGKSDRGHRVSFVNVA+PHRDGDYDGQRK  +GDFVEVR
Sbjct: 541 IGSIQLVLVEGPNKRALETEMIGKSDRGHRVSFVNVAIPHRDGDYDGQRKVAIGDFVEVR 600

Query: 601 ISKSTRASLFGEALAITKLSSFYNSMDESIACVS 635
           ISKSTRASLFGEALA+TKLSSFYNSMDESIACVS
Sbjct: 601 ISKSTRASLFGEALAVTKLSSFYNSMDESIACVS 629

[Close]

BLAST of HG10019019 vs. ExPASy TrEMBL
Match: A0A0A0KDY2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G411190 PE=3 SV=1)

HSP 1 Score: 1172.1 bits (3031), Expect = 0.0e+00
Identity = 585/635 (92.13%), Postives = 597/635 (94.02%), Query Frame = 0


Query: 1   MGFHVLRAPPFSSSTTIIFKPTSSASILLKFGYALYSSPFSKSSSSR-TYFRASSANYVA 60
           MGFHVLRAPP SSSTTI FKPTSS+S L KF Y LYS PFSKSSSS  +YF  SS NYVA
Sbjct: 1   MGFHVLRAPPLSSSTTIFFKPTSSSSFLFKFRYPLYSPPFSKSSSSSISYFLPSSPNYVA 60

Query: 61  SPATAIPLSGSFSRRTRSFRGGFIAATAAPGSVHKSEELRPSISPEKSWFQTQNGAESLP 120
           SP TAI LSGSFSR TR FRGGFIAA  A GSV +SEELRPSIS E+SW   QNG ESLP
Sbjct: 61  SPTTAILLSGSFSRSTRRFRGGFIAAATASGSVQRSEELRPSISSEQSWVLGQNGTESLP 120

Query: 121 ASEVPLRGRIYHETYGCQMNINDMEVVLSIMKNAGYSETVDIPETAEIIFINTCAIRDNA 180
           AS+VPL GR+YHETYGCQMNINDMEVVLSIMK AGYSETVD PETAEIIFINTCAIRDNA
Sbjct: 121 ASDVPLSGRVYHETYGCQMNINDMEVVLSIMKKAGYSETVDTPETAEIIFINTCAIRDNA 180

Query: 181 EQKVWQRLNYFWFLKRQWKSNVAIGRSQSRHPPKVVVLGCMAERLKDKILDADKMVDVVC 240
           EQKVWQRLNYFWFLKR WKSNVA GRSQSRHPPKVVVLGCMAERLKDKILD+DKMVDVVC
Sbjct: 181 EQKVWQRLNYFWFLKRNWKSNVATGRSQSRHPPKVVVLGCMAERLKDKILDSDKMVDVVC 240

Query: 241 GPDAYRDLPRLLDEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCS 300
           GPDAYRDLPRLLDEVDYGQKGINTLLSLEETYADISPVRI+KNSVTAFVSVMRGCNNMCS
Sbjct: 241 GPDAYRDLPRLLDEVDYGQKGINTLLSLEETYADISPVRIAKNSVTAFVSVMRGCNNMCS 300

Query: 301 FCIVPFTRGRERSRPVESIVCEVRELYGEGVKEVTLLGQNVNSYNDTTENADVEPGTNWK 360
           FCIVPFTRGRERSRPVESIVCEVRELY EGVKEVTLLGQNVNSYNDTTENAD+EPGTNWK
Sbjct: 301 FCIVPFTRGRERSRPVESIVCEVRELYREGVKEVTLLGQNVNSYNDTTENADIEPGTNWK 360

Query: 361 LSDGFSTIAKVKKMGLRFSDLLDRLSTEFPEMRFRYTSPHPKDFPDEFLYLMRDRQNICK 420
           LSDGFSTIAKVKKMGLRFSDLLDRLSTEFPEMRFRYTSPHPKDFPDEFLYLMRDR NICK
Sbjct: 361 LSDGFSTIAKVKKMGLRFSDLLDRLSTEFPEMRFRYTSPHPKDFPDEFLYLMRDRHNICK 420

Query: 421 SIHLPAQSGNSTVLERMRRGYTREAYLDLVHKIRSIIPDVGITSDFICGFCGETEEEHAD 480
           SIHLPAQSGNS VLERMRRGYTREAYLDLVHKIRSIIPDVGITSDFICGFCGETEEEHAD
Sbjct: 421 SIHLPAQSGNSIVLERMRRGYTREAYLDLVHKIRSIIPDVGITSDFICGFCGETEEEHAD 480

Query: 481 TLSLINEVGYDMAYMFAYSMREKTHAHRNYVDDVPEEVKQRRLTELIETFRNSTGRCYDS 540
           TLSLINEVGYDMAYMFAYSMREKTHAHRNYVDD+PEEVKQRRLTELIE FRNSTGRCYDS
Sbjct: 481 TLSLINEVGYDMAYMFAYSMREKTHAHRNYVDDIPEEVKQRRLTELIEAFRNSTGRCYDS 540

Query: 541 QIGSVQLVLVEGPNKRAPETEMIGKSDRGHRVSFVNVAVPHRDGDYDGQRKAVVGDFVEV 600
           QIGSVQLVLVEGPNKRAPETEMIGKSDR HRVSFVNVAVPHRDGDYDG RKA+VGDFVEV
Sbjct: 541 QIGSVQLVLVEGPNKRAPETEMIGKSDRSHRVSFVNVAVPHRDGDYDGHRKAMVGDFVEV 600

Query: 601 RISKSTRASLFGEALAITKLSSFYNSMDESIACVS 635
           RISKSTRASLFGEALAITKLSSFYN MDE IAC+S
Sbjct: 601 RISKSTRASLFGEALAITKLSSFYNGMDEPIACMS 635

[Close]

BLAST of HG10019019 vs. TAIR 10
Match: AT4G36390.1 (Methylthiotransferase )

HSP 1 Score: 825.1 bits (2130), Expect = 3.9e-239
Identity = 425/615 (69.11%), Postives = 492/615 (80.00%), Query Frame = 0


Query: 16  TIIFKPTSSASILLKFGYALYSSPFSKSSSSRTYFRASSANYVASPATAIPLSGSFSRRT 75
           ++ FK ++     L+F  +  ++  S SSSS    R  S+ +  +        G     +
Sbjct: 20  SLCFKASTQRCFALRF-LSSKATHASSSSSSALLPRCRSSTHRLTQKPINRKKGFSLNLS 79

Query: 76  RSFRGGFIAATAA--PGSVHKSEELRPSISPEKSWFQTQNGAESLPASEVPLRGRIYHET 135
           RSF    IA++      S+H   +   +     S    +  +ES   S++  +GRIYHET
Sbjct: 80  RSFSISQIASSGKFDGPSLH---QFVSNAQAHASLTTPETESESTLDSDIASKGRIYHET 139

Query: 136 YGCQMNINDMEVVLSIMKNAGYSETVDIPETAEIIFINTCAIRDNAEQKVWQRLNYFWFL 195
           YGCQMNINDME+VL+IMKN+GY E V  PE+AE+IF+NTCAIR+NAEQ+VWQRLNYFWFL
Sbjct: 140 YGCQMNINDMEIVLAIMKNSGYKEVVTDPESAEVIFVNTCAIRENAEQRVWQRLNYFWFL 199

Query: 196 KRQWKSNVAIGRSQSRHPPKVVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLDE 255
           KR+WK N A GR++S  PPKVVVLGCMAERLKDKILD+DKMVDVVCGPDAYRDLPRLL+E
Sbjct: 200 KREWKVNAATGRAKSLKPPKVVVLGCMAERLKDKILDSDKMVDVVCGPDAYRDLPRLLEE 259

Query: 256 VDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSR 315
           VDYGQKGINTLLSLEETYADISPVRIS+NS+TAFVSVMRGCNNMC+FCIVPFTRGRERSR
Sbjct: 260 VDYGQKGINTLLSLEETYADISPVRISENSITAFVSVMRGCNNMCAFCIVPFTRGRERSR 319

Query: 316 PVESIVCEVRELYGEGVKEVTLLGQNVNSYNDTTENADVEPGTNWKLSDGFSTIAKVKKM 375
           PVESI+ EV EL+  GVKEVTLLGQNVNSYND  ++AD E G NW+ S+GFS+  KVK M
Sbjct: 320 PVESIIREVGELWESGVKEVTLLGQNVNSYND--DSADRESGANWEYSEGFSSRCKVKNM 379

Query: 376 GLRFSDLLDRLSTEFPEMRFRYTSPHPKDFPDEFLYLMRDRQNICKSIHLPAQSGNSTVL 435
           GLRF+DLLDRLS EFPEMRFR+TSPHPKD+PDE LYLMRDR NIC  IHLPAQSGNS +L
Sbjct: 380 GLRFADLLDRLSVEFPEMRFRFTSPHPKDYPDELLYLMRDRHNICNLIHLPAQSGNSRIL 439

Query: 436 ERMRRGYTREAYLDLVHKIRSIIPDVGITSDFICGFCGETEEEHADTLSLINEVGYDMAY 495
           E+MRRGYTREAYLDLV KIRSIIPDV ITSDFI GFCGETEEEH +TLSL+  VGYDMAY
Sbjct: 440 EQMRRGYTREAYLDLVKKIRSIIPDVAITSDFITGFCGETEEEHQETLSLVRAVGYDMAY 499

Query: 496 MFAYSMREKTHAHRNYVDDVPEEVKQRRLTELIETFRNSTGRCYDSQIGSVQLVLVEGPN 555
           MFAYSMREKTHAHRNY DDVPEEVKQRRLTELI+ FR +TG CYDSQ+GS QLVLVEGPN
Sbjct: 500 MFAYSMREKTHAHRNYTDDVPEEVKQRRLTELIDAFRETTGPCYDSQVGSTQLVLVEGPN 559

Query: 556 KRAPETEMIGKSDRGHRVSFVNVAVPHR----DGDYDGQRKAVVGDFVEVRISKSTRASL 615
           KRAPETE+IGK+D+GHRVSFV   +  +    DGD D +R   +GDFVEV+I KSTRASL
Sbjct: 560 KRAPETELIGKTDKGHRVSFVTKPLFDKACLLDGD-DLKRNPGIGDFVEVQIEKSTRASL 619

Query: 616 FGEALAITKLSSFYN 625
           FGEALAI+K+S F++
Sbjct: 620 FGEALAISKMSLFHD 627

[Close]

BLAST of HG10019019 vs. TAIR 10
Match: AT1G72090.1 (Methylthiotransferase )

HSP 1 Score: 145.2 bits (365), Expect = 1.8e-34
Identity = 125/515 (24.27%), Postives = 222/515 (43.11%), Query Frame = 0


Query: 111 TQNGAESL--PASEVPLRGRIYHETYGCQMNINDMEVVLSIMKNAGYSETVDIPETAEII 170
           T +  +SL  P+ ++P    IY +T+GC  N +D E +   +   GY+ T ++PE A++ 
Sbjct: 46  TASNRDSLAPPSMKIPGTQTIYIKTFGCSHNQSDSEYMAGQLSAFGYALT-EVPEEADLW 105

Query: 171 FINTCAIRDNAEQKVWQRLNYFWFLKRQWKSNVAIGRSQSRHPPKVVVLGCMAERLKD-K 230
            INTC ++  ++  +                +  I R +S   P +V+ GC+ +  +D K
Sbjct: 106 LINTCTVKSPSQSAM----------------STLITRGRSGKKP-LVIAGCVPQGSRDLK 165

Query: 231 ILDADKMVDVVCGPDAYRDLPRLLDEVDYGQKGINTLLSLEETYADISPVRISKNSVTAF 290
            L+   +V V       + + R+++ V+   KG    L   +T   +   ++ +N+    
Sbjct: 166 ELEGVSVVGV-------QQIDRVVEIVEETLKGHEVRLLTRKTLPALDLPKVRRNNFIEI 225

Query: 291 VSVMRGCNNMCSFCIVPFTRGRERSRPVESIVCEVRELYGEGVKEVTLLGQNVNSYNDTT 350
           + +  GC   C++C     RG   S  V+S+V  VR +  EGVKE+ L  ++  +Y    
Sbjct: 226 LPINVGCLGACTYCKTKHARGHLGSYTVDSLVERVRTVISEGVKEIWLSSEDTGAYG--- 285

Query: 351 ENADVEPGTNWKLSDGFSTIAKVKKMGLRFSDLLDRLSTEFPE-----MRFRYTS-PHPK 410
                                  + +G+    LL+ +  E P      +R   T+ P   
Sbjct: 286 -----------------------RDIGVNLPILLNAIVKELPSDQSTMLRIGMTNPPFIL 345

Query: 411 DFPDEFLYLMRDRQNICKSIHLPAQSGNSTVLERMRRGYTREAYLDLVHKIRSIIPDVGI 470
           +   E   ++R    +   +H+P QSG+ +VL  M R YT   +  +V  +  ++P + I
Sbjct: 346 EHLKEIAAVLR-HPCVYTFLHVPVQSGSDSVLTAMNREYTASEFRTVVDTLTELVPGMQI 405

Query: 471 TSDFICGFCGETEEEHADTLSLINEVGYDMAYMFAYSMREKTHAHR-NYVDDVPEEVKQR 530
            +D ICGF GET+E+ + T+ LI +  +   ++  +  R  T A +   V     + + R
Sbjct: 406 ATDIICGFPGETDEDFSQTVELIKDYKFPQVHISQFYPRPGTPAAKMKKVQSKIVKQRSR 465

Query: 531 RLTELIETFRNSTG-RCYDSQIGSVQLVLVEGPNKRAPETEMIGKSDRGHRVSFVNVAVP 590
            LT + E F   TG  C + +I                E    G    GH   +V V V 
Sbjct: 466 ELTSVFEAFAPYTGMECREERIW-------------ITEVATDGIHLVGHTKGYVQVLVT 487

Query: 591 HRDGDYDGQRKAVVGDFVEVRISKSTRASLFGEAL 615
             +        +++G     RI+   R S+FGE +
Sbjct: 526 GPE--------SMLGTSAMARITSVGRWSVFGEVI 487

The following BLAST results are available for this feature:

BLAST of HG10019019 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038887766.1	0.0e+00	95.76	CDK5RAP1-like protein isoform X2 [Benincasa hispida]	[more]
XP_038887765.1	0.0e+00	93.27	CDK5RAP1-like protein isoform X1 [Benincasa hispida]	[more]
XP_008449427.1	0.0e+00	93.07	PREDICTED: CDK5RAP1-like protein [Cucumis melo] >KAA0057321.1 CDK5RAP1-like prot...	[more]
XP_022927671.1	0.0e+00	91.80	CDK5RAP1-like protein [Cucurbita moschata]	[more]
KAG7022582.1	0.0e+00	91.64	CDK5RAP1-like protein [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of HG10019019 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q2R1U4	4.5e-240	75.84	CDK5RAP1-like protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os11g0592800 P...	[more]
Q8H0V1	5.5e-238	69.11	CDK5RAP1-like protein OS=Arabidopsis thaliana OX=3702 GN=At4g36390 PE=2 SV=1	[more]
Q9JLH6	1.2e-144	53.65	Mitochondrial tRNA methylthiotransferase CDK5RAP1 OS=Rattus norvegicus OX=10116 ...	[more]
Q8BTW8	1.3e-143	54.16	Mitochondrial tRNA methylthiotransferase CDK5RAP1 OS=Mus musculus OX=10090 GN=Cd...	[more]
Q9VGZ1	1.7e-143	52.01	CDK5RAP1-like protein OS=Drosophila melanogaster OX=7227 GN=CG6345 PE=2 SV=1	[more]

BLAST of HG10019019 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CNB2	0.0e+00	93.07	CDK5RAP1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold49...	[more]
A0A1S3BLE1	0.0e+00	93.07	CDK5RAP1-like protein OS=Cucumis melo OX=3656 GN=LOC103491318 PE=3 SV=1	[more]
A0A6J1EIA8	0.0e+00	91.80	CDK5RAP1-like protein OS=Cucurbita moschata OX=3662 GN=LOC111434491 PE=3 SV=1	[more]
A0A6J1JMU5	0.0e+00	91.64	CDK5RAP1-like protein OS=Cucurbita maxima OX=3661 GN=LOC111486642 PE=3 SV=1	[more]
A0A0A0KDY2	0.0e+00	92.13	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G411190 PE=3 SV=1	[more]

BLAST of HG10019019 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G36390.1	3.9e-239	69.11	Methylthiotransferase	[more]
AT1G72090.1	1.8e-34	24.27	Methylthiotransferase	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006638	Elp3/MiaB/NifB	SMART	SM00729	MiaB	coord: 284..524 e-value: 9.8E-51 score: 184.5
IPR007197	Radical SAM	PFAM	PF04055	Radical_SAM	coord: 288..484 e-value: 1.3E-33 score: 116.7
IPR007197	Radical SAM	SFLD	SFLDS00029	Radical_SAM	coord: 127..619 e-value: 0.0 score: 680.0
IPR007197	Radical SAM	PROSITE	PS51918	RADICAL_SAM	coord: 280..535 score: 35.288601
IPR002792	TRAM domain	PFAM	PF01938	TRAM	coord: 538..614 e-value: 6.0E-14 score: 51.8
IPR002792	TRAM domain	PROSITE	PS50926	TRAM	coord: 538..615 score: 14.678218
IPR005839	Methylthiotransferase	TIGRFAM	TIGR00089	TIGR00089	coord: 128..611 e-value: 1.9E-113 score: 377.4
IPR023404	Radical SAM, alpha/beta horseshoe	GENE3D	3.80.30.20	tm_1862 like domain	coord: 282..538 e-value: 4.2E-82 score: 277.1
IPR038135	Methylthiotransferase, N-terminal domain superfamily	GENE3D	3.40.50.12160		coord: 128..269 e-value: 2.3E-38 score: 132.8
IPR013848	Methylthiotransferase, N-terminal	PFAM	PF00919	UPF0004	coord: 128..240 e-value: 4.3E-30 score: 103.6
IPR013848	Methylthiotransferase, N-terminal	PROSITE	PS51449	MTTASE_N	coord: 127..256 score: 37.475998
None	No IPR available	TIGRFAM	TIGR01574	TIGR01574	coord: 129..612 e-value: 6.2E-116 score: 385.9
None	No IPR available	SFLD	SFLDF00413	CDK5RAP1	coord: 127..619 e-value: 0.0 score: 680.0
None	No IPR available	SFLD	SFLDG01082	B12-binding_domain_containing	coord: 197..506 e-value: 1.0E-27 score: 91.6
None	No IPR available	PANTHER	PTHR43020	CDK5 REGULATORY SUBUNIT-ASSOCIATED PROTEIN 1	coord: 108..625
None	No IPR available	CDD	cd01335	Radical_SAM	coord: 292..517 e-value: 7.14917E-8 score: 51.1801
None	No IPR available	SUPERFAMILY	102114	Radical SAM enzymes	coord: 278..531
IPR006463	tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB	SFLD	SFLDF00273	(dimethylallyl)adenosine_tRNA	coord: 128..615 e-value: 0.0 score: 539.7
IPR020612	Methylthiotransferase, conserved site	PROSITE	PS01278	MTTASE_RADICAL	coord: 288..308

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10019019.1	HG10019019.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045736	negative regulation of cyclin-dependent protein serine/threonine kinase activity
biological_process	GO:0035600	tRNA methylthiolation
biological_process	GO:0006400	tRNA modification
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0051539	4 iron, 4 sulfur cluster binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0035597	N6-isopentenyladenosine methylthiotransferase activity
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0051536	iron-sulfur cluster binding
molecular_function	GO:0035596	methylthiotransferase activity
molecular_function	GO:0016740	transferase activity