Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACCTTTGAGGACAAAAATGATAAGAAGCTAAAAGGCATCGCCTTGCAATCCTCTATTAGTGAGGACTCAGTTTACAAGATTAGAGACTCAAATGAAAATCTTGCTGAATCTATATCTCTTCTGGCCAAACAGTTTGGAAAAGCTCTCAAACGATGGAAAAAACGTTCCGGCTCCCAAAGGAATTATGCTTCACCACATGTTAAAGACTTAAGCAACGACATATCTAACCAAAATTCAAAACTTCCAAAACAGGCAGGCAAGAAACCCGACAATGATAAAAACAACTGTGGTGGTCAAGCAATTAGAGAAAGATCTTTTAGATTTCATGAGTGTGAGAGTTTTGGATACTATCAGGCTGAATGTCCTAACTTCCTAAAAAGAAAGGAGAAAGGATTTGCTGCTACCCTCTTAGATGATGAATCAGAAGTGAGCAGTGAATTAGATGATGAAGTGAAAGCCCTGATGGGGAGTATGTCCCTTGAGCATTCTGTTCAAGATAAAGTGTCCTGTAATGATGGTGTCGTCAAGACGAAAATGTGTGAGCAAAACTCAGAACATCATGGAACTTTGTCTTATGAGGAAATTAGCCTGGTCAGAGGATAAAAAAATCTTGGTTGTTCAGAAAGAGAGAACTGAGAAACTTATTGAAGACAACCATCGGCTAATGAGTACCATATCAGAGTTGAAGAAAGAATTGCGAGAGGCTAAAGCTGATCATGACAGACTATCTAACTCTGGAACAGATGATCTTGAAAAAATCTTGTCATCAGGAAAGAAAGTGTCTGACAAGAGAGGCATCAGATTTGAGAATTCGAGAAAACTAAGACACATTAGCGAATCTTCCTTGAGCAATAGATTTGTTCCAGCTCAAAATTCTCCTGTGATCTATTCAAAGTTAAAAACATGA
mRNA sequence
ATGACCTTTGAGGACAAAAATGATAAGAAGCTAAAAGGCATCGCCTTGCAATCCTCTATTAGTGAGGACTCAGTTTACAAGATTAGAGACTCAAATGAAAATCTTGCTGAATCTATATCTCTTCTGGCCAAACAGTTTGGAAAAGCTCTCAAACGATGGAAAAAACGTTCCGGCTCCCAAAGGAATTATGCTTCACCACATGTTAAAGACTTAAGCAACGACATATCTAACCAAAATTCAAAACTTCCAAAACAGGCAGGCAAGAAACCCGACAATGATAAAAACAACTGTGGTGGTCAAGCAATTAGAGAAAGATCTTTTAGATTTCATGAGTGTGAGAGTTTTGGATACTATCAGGCTGAATGTCCTAACTTCCTAAAAAGAAAGGAGAAAGGATTTGCTGCTACCCTCTTAGATGATGAATCAGAAGTGAGCAGTGAATTAGATGATGAAGTGAAAGCCCTGATGGGGAGTATGTCCCTTGAGCATTCTGTTCAAGATAAAGTGTCCTGTAATGATGGTGTCGTCAAGACGAAAATGTGTGAGCAAAACTCAGAACATCATGGAACTTTGTCTTATGAGGAAATTAGCCTGAAAGAGAGAACTGAGAAACTTATTGAAGACAACCATCGGCTAATGAGTACCATATCAGAGTTGAAGAAAGAATTGCGAGAGGCTAAAGCTGATCATGACAGACTATCTAACTCTGGAACAGATGATCTTGAAAAAATCTTGTCATCAGGAAAGAAAGTGTCTGACAAGAGAGGCATCAGATTTGAGAATTCGAGAAAACTAAGACACATTAGCGAATCTTCCTTGAGCAATAGATTTGTTCCAGCTCAAAATTCTCCTGTGATCTATTCAAAGTTAAAAACATGA
Coding sequence (CDS)
ATGACCTTTGAGGACAAAAATGATAAGAAGCTAAAAGGCATCGCCTTGCAATCCTCTATTAGTGAGGACTCAGTTTACAAGATTAGAGACTCAAATGAAAATCTTGCTGAATCTATATCTCTTCTGGCCAAACAGTTTGGAAAAGCTCTCAAACGATGGAAAAAACGTTCCGGCTCCCAAAGGAATTATGCTTCACCACATGTTAAAGACTTAAGCAACGACATATCTAACCAAAATTCAAAACTTCCAAAACAGGCAGGCAAGAAACCCGACAATGATAAAAACAACTGTGGTGGTCAAGCAATTAGAGAAAGATCTTTTAGATTTCATGAGTGTGAGAGTTTTGGATACTATCAGGCTGAATGTCCTAACTTCCTAAAAAGAAAGGAGAAAGGATTTGCTGCTACCCTCTTAGATGATGAATCAGAAGTGAGCAGTGAATTAGATGATGAAGTGAAAGCCCTGATGGGGAGTATGTCCCTTGAGCATTCTGTTCAAGATAAAGTGTCCTGTAATGATGGTGTCGTCAAGACGAAAATGTGTGAGCAAAACTCAGAACATCATGGAACTTTGTCTTATGAGGAAATTAGCCTGAAAGAGAGAACTGAGAAACTTATTGAAGACAACCATCGGCTAATGAGTACCATATCAGAGTTGAAGAAAGAATTGCGAGAGGCTAAAGCTGATCATGACAGACTATCTAACTCTGGAACAGATGATCTTGAAAAAATCTTGTCATCAGGAAAGAAAGTGTCTGACAAGAGAGGCATCAGATTTGAGAATTCGAGAAAACTAAGACACATTAGCGAATCTTCCTTGAGCAATAGATTTGTTCCAGCTCAAAATTCTCCTGTGATCTATTCAAAGTTAAAAACATGA
Protein sequence
MTFEDKNDKKLKGIALQSSISEDSVYKIRDSNENLAESISLLAKQFGKALKRWKKRSGSQRNYASPHVKDLSNDISNQNSKLPKQAGKKPDNDKNNCGGQAIRERSFRFHECESFGYYQAECPNFLKRKEKGFAATLLDDESEVSSELDDEVKALMGSMSLEHSVQDKVSCNDGVVKTKMCEQNSEHHGTLSYEEISLKERTEKLIEDNHRLMSTISELKKELREAKADHDRLSNSGTDDLEKILSSGKKVSDKRGIRFENSRKLRHISESSLSNRFVPAQNSPVIYSKLKT
Homology
BLAST of HG10019010 vs. NCBI nr
Match:
KAA0045252.1 (gag-proteinase polyprotein [Cucumis melo var. makuwa] >TYK19278.1 gag-proteinase polyprotein [Cucumis melo var. makuwa])
HSP 1 Score: 110.9 bits (276), Expect = 1.8e-20
Identity = 98/304 (32.24%), Postives = 162/304 (53.29%), Query Frame = 0
Query: 1 MTFE----DKNDKKLKGIALQ-SSISEDSVYKIRDSNENLAESISLLAKQFGKALKRWKK 60
+TFE D+ KK KGIA + + +SE++V D+ N+ ESI LL KQF +K++K
Sbjct: 206 LTFEMATTDRESKKGKGIAFKFTHVSEEAV---SDTKANMNESIDLLIKQFSNVIKKFKN 265
Query: 61 RSGSQRNYASPHVKDLSNDISNQNSKLPKQAGKKPDNDKNNCGGQAIRERSFRFHECESF 120
+ + N A + D N ++ + + ++ + G+ R FR ECE
Sbjct: 266 LNTTGSN-AQNLINYQRKDGENNTRRINENSNRRNSDYGRKKEGEG---RVFRCRECEGV 325
Query: 121 GYYQAECPNFLKRKEKGFAATLLDDESEVSSELDDEVKALMGSMSLEHSVQDKVSCNDGV 180
G+YQAECP FL+R++K F ATL D ++ E D+ + A +S E D+ C+
Sbjct: 326 GHYQAECPTFLRRQKKNFRATLSDKDTG-DGEEDNSMNAFTVCIS-ETDSGDESECSG-- 385
Query: 181 VKTKMCEQNSEHHGTLSYEEISL------------KERTEKLIEDNHRLMSTISELKKEL 240
++C++N ++EE+ + KER + L+E+N RLM IS LK +L
Sbjct: 386 ---QICDKN------FTFEELRVLWKEDFEARAIQKERIQDLMEENERLMYVISSLKLKL 445
Query: 241 REAKADHD------RLSNSGTDDLEKILSSGKKVSDKRGIRFENS-RKLRHISESSLSNR 281
+E + ++D ++ NSGT++L+ IL+SG+ ++ G+ F+ S RK+ +E +
Sbjct: 446 KEVQCEYDQTLKSVKMLNSGTENLDVILNSGQNGLNRHGLGFDTSARKINTTTEIN---- 485
BLAST of HG10019010 vs. NCBI nr
Match:
KAA0035157.1 (gag-pol polyprotein [Cucumis melo var. makuwa])
HSP 1 Score: 109.0 bits (271), Expect = 7.0e-20
Identity = 96/296 (32.43%), Postives = 149/296 (50.34%), Query Frame = 0
Query: 1 MTFEDKNDKKLKGIALQSSISEDSVYKIRDSNENLAESISLLAKQFGKALKRWKKRSGSQ 60
MT D+ KK KGIA +S+ + V D N+ ESI+LL +QF AL
Sbjct: 104 MTTTDRESKKGKGIAFKSTHVSEKV--DCDIEVNMDESIALLTQQFTNAL---------- 163
Query: 61 RNYASPHVKDLSNDISNQNSKLPKQAGKKPDNDKNNCGGQAIRERS------FRFHECES 120
RN +P+V ++ SNQ + + +N+ +N ++ FR EC
Sbjct: 164 RNLNNPNVTGMNVQTSNQYRRRNDNGPTRRNNENSNRRSDGYLKKKEGDRKIFRCRECGG 223
Query: 121 FGYYQAECPNFLKRKEKGFAATLLDDESEVSSELDDEVKALMGSMSLEHSVQDKVSCNDG 180
G+YQ ECP F+++++K F LLD+ES S + D + A ++ D C+
Sbjct: 224 VGHYQVECPMFMRKQKKNFRVILLDEESVDSRDDDGNINAFAVRIT-----DDDSECS-- 283
Query: 181 VVKTKMCEQNSEHHGTLSYEEISL----KERTEKLIEDNHRLMSTISELKKELREAKADH 240
V++K E + E TL E+ KER + L+E+N RLMS IS LK +LRE + ++
Sbjct: 284 -VESKNDELSIEKLETLWKEDCEARAIQKERIQDLLEENERLMSVISSLKLKLREVQNEN 343
Query: 241 D------RLSNSGTDDLEKILSSGKKVSDKRGIRFENSRKLRHISESSLSNRFVPA 281
D ++ NSGT++L+ IL +G S + G+ F S S+++ +FVPA
Sbjct: 344 DQILKFVKMLNSGTENLDSILKAGHNGSHRYGLGFVTSAS---SSKATSEIKFVPA 376
BLAST of HG10019010 vs. NCBI nr
Match:
KAA0036592.1 (gag-proteinase polyprotein [Cucumis melo var. makuwa] >TYK22629.1 gag-proteinase polyprotein [Cucumis melo var. makuwa])
HSP 1 Score: 106.7 bits (265), Expect = 3.5e-19
Identity = 84/282 (29.79%), Postives = 147/282 (52.13%), Query Frame = 0
Query: 1 MTFEDKNDKKLKGIALQSSISEDSVYKIRDSNENLAESISLLAKQFGKALKRWKKRSGSQ 60
M + +KK KG+ +S ++++ D N+ +SI LL KQF +K++K + +
Sbjct: 210 MAISHRENKKGKGVVFKSIYEDETMVNQSDKEANMNKSIDLLIKQFSNVVKKFKNLNTTG 269
Query: 61 RNYASPHVKDLSNDISNQNSKLPKQAGKKPDNDKNNCGGQAIRERSFRFHECESFGYYQA 120
N A + D N + + + ++ + G+ ER FR ECE G+YQA
Sbjct: 270 SN-AQNLINYQRKDGENNTRRFNENSNRRNSDYGRKKEGE---ERVFRCRECEGVGHYQA 329
Query: 121 ECPNFLKRKEKGFAATLLDDESEVSSELDDEVKALMGSMSLEHSVQDKVSCNDGVVKTKM 180
ECP FL+R++K F TL D+++ +E D+ + A + V+ D +++
Sbjct: 330 ECPTFLRRQKKNFHDTLSDEDTN-DNEEDNGMNAFI----------VHVTKTDSDDESES 389
Query: 181 CEQNSEHHGTLSYEEISL------------KERTEKLIEDNHRLMSTISELKKELREAKA 240
E+N ++ L++EE+ + KER ++ +E+N RLMS IS LK +L+E +
Sbjct: 390 YEENYDNE--LTFEELKVLWKEDTEARAIQKERIQEFMEENERLMSVISSLKLKLKEVQK 449
Query: 241 DHDR------LSNSGTDDLEKILSSGKKVSDKRGIRFENSRK 265
D+D+ + NSG ++L+ L+SGK S K G+ F+ S++
Sbjct: 450 DYDQTIKSVEMLNSGIENLDLNLNSGKNSSSKYGLGFDASKR 474
BLAST of HG10019010 vs. NCBI nr
Match:
TYK14780.1 (gag-proteinase polyprotein [Cucumis melo var. makuwa])
HSP 1 Score: 105.9 bits (263), Expect = 5.9e-19
Identity = 98/301 (32.56%), Postives = 155/301 (51.50%), Query Frame = 0
Query: 1 MTFEDKNDKKLKGIALQSSISEDSVYKIRDSNENLAESISLLAKQFGKALKRWKKRSGSQ 60
MT ++ +KK K I +S E+++ D+ N+ ESI+LL KQF K ++++K + +
Sbjct: 162 MTISNRENKKGKMITFKSIYEEETLVNQSDNEVNIDESIALLTKQFSKVVRKFKNTNTIE 221
Query: 61 RNYASPHV---KDLSNDISNQNSKLPKQAGKKPDNDKNNCGGQAIRERSFRFHECESFGY 120
N + + KD N I N + DND + R FR EC G
Sbjct: 222 SNAQNSNQYRRKDGKNTIRRYN-----VVSNRRDNDYGK--EKEGEGRCFRCREC-GVGR 281
Query: 121 YQAECPNFLKRKEKGFAATLLDDESEVSSELDDEVKALMGSMSLEHSVQDKVSCNDGVVK 180
YQAECP FL+R++K F ATL D++ + +SE D+ +KA + +E D+ C
Sbjct: 282 YQAECPIFLRRQKKNFRATLSDEDID-NSEDDNGIKAFAVCI-IEIDFGDESEC------ 341
Query: 181 TKMCEQNSEHHGTLSYEEISL------------KERTEKLIEDNHRLMSTISELKKELRE 240
E+N + L++EE+ + KER + L+E+N +LMS IS LK + +E
Sbjct: 342 ---FEENYDEE--LTFEELKVLWKEDSEARAIQKERIQDLMEENEQLMSVISSLKLKSKE 401
Query: 241 AKADHD------RLSNSGTDDLEKILSSGKKVSDKRGIRFENSRKLRHISESSLSNRFVP 281
+ D+D ++ NSGT+ L+ IL+SG+ S K G+ F+ S K + + +FVP
Sbjct: 402 VQNDYDQTIKTVKMLNSGTEKLDSILNSGQNSSSKYGLGFDVSVK---SIKPTTEIKFVP 438
BLAST of HG10019010 vs. NCBI nr
Match:
KAA0050329.1 (gag-proteinase polyprotein [Cucumis melo var. makuwa] >TYK03546.1 gag-proteinase polyprotein [Cucumis melo var. makuwa])
HSP 1 Score: 105.5 bits (262), Expect = 7.7e-19
Identity = 90/300 (30.00%), Postives = 160/300 (53.33%), Query Frame = 0
Query: 1 MTFEDKNDKKLKGIALQSSISEDSVYKIRDSNENLAESISLLAKQFGKALKRWKKRSGSQ 60
M D+ +KK KG+A +S E++ D+ N+ ESI+LL +QF K ++++K + +
Sbjct: 75 MAISDRENKKGKGVAFKSIYEEETTVNQSDNEANMNESIALLMEQFSKVVRKFKNVNTTG 134
Query: 61 RNYASP-HVKDLSNDISNQNSKLPKQAGKKPDNDKNNCGGQAIRERSFRFHECESFGYYQ 120
N +P H + D N + + + K+ ++ + G+ +SFR EC G+YQ
Sbjct: 135 SNDQNPNHYR--RKDGENTTRRYNEASNKRDEDYRKKKKGEG---KSFRCRECGGVGHYQ 194
Query: 121 AECPNFLKRKEKGFAATLLDDESEVSSELDDEVKALMGSMSLEHSVQDKVSCNDGVVKTK 180
EC FL+R++K F + +S+E D+ K G ++ +V+ D +++
Sbjct: 195 VECSTFLRRQKKNFQKNF---RATLSNEDIDDNKEDNGM----NAFTVRVTETDSDDESE 254
Query: 181 MCEQNSEHHGTLSYEEISL------------KERTEKLIEDNHRLMSTISELKKELREAK 240
E+N ++ L++EE+ + KER + L+E+N RLMS IS LK +L+E +
Sbjct: 255 SSEENYDNE--LTFEELRVLWKEDNEARAIQKERIQDLMEENERLMSIISSLKLKLKEIQ 314
Query: 241 ADHD------RLSNSGTDDLEKILSSGKKVSDKRGIRFENS-RKLRHISESSLSNRFVPA 281
+HD ++ NSG ++L+ IL+ G+ S K G+ F+ S R ++ +E+ +FVPA
Sbjct: 315 NEHDQTIKSVKMLNSGIENLDLILNLGQNNSSKYGLGFDASERSIKPTTET----KFVPA 356
BLAST of HG10019010 vs. ExPASy TrEMBL
Match:
A0A5A7TPF7 (Gag-proteinase polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1493G00870 PE=4 SV=1)
HSP 1 Score: 110.9 bits (276), Expect = 8.9e-21
Identity = 98/304 (32.24%), Postives = 162/304 (53.29%), Query Frame = 0
Query: 1 MTFE----DKNDKKLKGIALQ-SSISEDSVYKIRDSNENLAESISLLAKQFGKALKRWKK 60
+TFE D+ KK KGIA + + +SE++V D+ N+ ESI LL KQF +K++K
Sbjct: 206 LTFEMATTDRESKKGKGIAFKFTHVSEEAV---SDTKANMNESIDLLIKQFSNVIKKFKN 265
Query: 61 RSGSQRNYASPHVKDLSNDISNQNSKLPKQAGKKPDNDKNNCGGQAIRERSFRFHECESF 120
+ + N A + D N ++ + + ++ + G+ R FR ECE
Sbjct: 266 LNTTGSN-AQNLINYQRKDGENNTRRINENSNRRNSDYGRKKEGEG---RVFRCRECEGV 325
Query: 121 GYYQAECPNFLKRKEKGFAATLLDDESEVSSELDDEVKALMGSMSLEHSVQDKVSCNDGV 180
G+YQAECP FL+R++K F ATL D ++ E D+ + A +S E D+ C+
Sbjct: 326 GHYQAECPTFLRRQKKNFRATLSDKDTG-DGEEDNSMNAFTVCIS-ETDSGDESECSG-- 385
Query: 181 VKTKMCEQNSEHHGTLSYEEISL------------KERTEKLIEDNHRLMSTISELKKEL 240
++C++N ++EE+ + KER + L+E+N RLM IS LK +L
Sbjct: 386 ---QICDKN------FTFEELRVLWKEDFEARAIQKERIQDLMEENERLMYVISSLKLKL 445
Query: 241 REAKADHD------RLSNSGTDDLEKILSSGKKVSDKRGIRFENS-RKLRHISESSLSNR 281
+E + ++D ++ NSGT++L+ IL+SG+ ++ G+ F+ S RK+ +E +
Sbjct: 446 KEVQCEYDQTLKSVKMLNSGTENLDVILNSGQNGLNRHGLGFDTSARKINTTTEIN---- 485
BLAST of HG10019010 vs. ExPASy TrEMBL
Match:
A0A5A7T0Q0 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold57G002510 PE=4 SV=1)
HSP 1 Score: 109.0 bits (271), Expect = 3.4e-20
Identity = 96/296 (32.43%), Postives = 149/296 (50.34%), Query Frame = 0
Query: 1 MTFEDKNDKKLKGIALQSSISEDSVYKIRDSNENLAESISLLAKQFGKALKRWKKRSGSQ 60
MT D+ KK KGIA +S+ + V D N+ ESI+LL +QF AL
Sbjct: 104 MTTTDRESKKGKGIAFKSTHVSEKV--DCDIEVNMDESIALLTQQFTNAL---------- 163
Query: 61 RNYASPHVKDLSNDISNQNSKLPKQAGKKPDNDKNNCGGQAIRERS------FRFHECES 120
RN +P+V ++ SNQ + + +N+ +N ++ FR EC
Sbjct: 164 RNLNNPNVTGMNVQTSNQYRRRNDNGPTRRNNENSNRRSDGYLKKKEGDRKIFRCRECGG 223
Query: 121 FGYYQAECPNFLKRKEKGFAATLLDDESEVSSELDDEVKALMGSMSLEHSVQDKVSCNDG 180
G+YQ ECP F+++++K F LLD+ES S + D + A ++ D C+
Sbjct: 224 VGHYQVECPMFMRKQKKNFRVILLDEESVDSRDDDGNINAFAVRIT-----DDDSECS-- 283
Query: 181 VVKTKMCEQNSEHHGTLSYEEISL----KERTEKLIEDNHRLMSTISELKKELREAKADH 240
V++K E + E TL E+ KER + L+E+N RLMS IS LK +LRE + ++
Sbjct: 284 -VESKNDELSIEKLETLWKEDCEARAIQKERIQDLLEENERLMSVISSLKLKLREVQNEN 343
Query: 241 D------RLSNSGTDDLEKILSSGKKVSDKRGIRFENSRKLRHISESSLSNRFVPA 281
D ++ NSGT++L+ IL +G S + G+ F S S+++ +FVPA
Sbjct: 344 DQILKFVKMLNSGTENLDSILKAGHNGSHRYGLGFVTSAS---SSKATSEIKFVPA 376
BLAST of HG10019010 vs. ExPASy TrEMBL
Match:
A0A5D3DH72 (Gag-proteinase polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold195G00600 PE=4 SV=1)
HSP 1 Score: 106.7 bits (265), Expect = 1.7e-19
Identity = 84/282 (29.79%), Postives = 147/282 (52.13%), Query Frame = 0
Query: 1 MTFEDKNDKKLKGIALQSSISEDSVYKIRDSNENLAESISLLAKQFGKALKRWKKRSGSQ 60
M + +KK KG+ +S ++++ D N+ +SI LL KQF +K++K + +
Sbjct: 210 MAISHRENKKGKGVVFKSIYEDETMVNQSDKEANMNKSIDLLIKQFSNVVKKFKNLNTTG 269
Query: 61 RNYASPHVKDLSNDISNQNSKLPKQAGKKPDNDKNNCGGQAIRERSFRFHECESFGYYQA 120
N A + D N + + + ++ + G+ ER FR ECE G+YQA
Sbjct: 270 SN-AQNLINYQRKDGENNTRRFNENSNRRNSDYGRKKEGE---ERVFRCRECEGVGHYQA 329
Query: 121 ECPNFLKRKEKGFAATLLDDESEVSSELDDEVKALMGSMSLEHSVQDKVSCNDGVVKTKM 180
ECP FL+R++K F TL D+++ +E D+ + A + V+ D +++
Sbjct: 330 ECPTFLRRQKKNFHDTLSDEDTN-DNEEDNGMNAFI----------VHVTKTDSDDESES 389
Query: 181 CEQNSEHHGTLSYEEISL------------KERTEKLIEDNHRLMSTISELKKELREAKA 240
E+N ++ L++EE+ + KER ++ +E+N RLMS IS LK +L+E +
Sbjct: 390 YEENYDNE--LTFEELKVLWKEDTEARAIQKERIQEFMEENERLMSVISSLKLKLKEVQK 449
Query: 241 DHDR------LSNSGTDDLEKILSSGKKVSDKRGIRFENSRK 265
D+D+ + NSG ++L+ L+SGK S K G+ F+ S++
Sbjct: 450 DYDQTIKSVEMLNSGIENLDLNLNSGKNSSSKYGLGFDASKR 474
BLAST of HG10019010 vs. ExPASy TrEMBL
Match:
A0A5D3CTL4 (Gag-proteinase polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1610G00200 PE=4 SV=1)
HSP 1 Score: 105.9 bits (263), Expect = 2.9e-19
Identity = 98/301 (32.56%), Postives = 155/301 (51.50%), Query Frame = 0
Query: 1 MTFEDKNDKKLKGIALQSSISEDSVYKIRDSNENLAESISLLAKQFGKALKRWKKRSGSQ 60
MT ++ +KK K I +S E+++ D+ N+ ESI+LL KQF K ++++K + +
Sbjct: 162 MTISNRENKKGKMITFKSIYEEETLVNQSDNEVNIDESIALLTKQFSKVVRKFKNTNTIE 221
Query: 61 RNYASPHV---KDLSNDISNQNSKLPKQAGKKPDNDKNNCGGQAIRERSFRFHECESFGY 120
N + + KD N I N + DND + R FR EC G
Sbjct: 222 SNAQNSNQYRRKDGKNTIRRYN-----VVSNRRDNDYGK--EKEGEGRCFRCREC-GVGR 281
Query: 121 YQAECPNFLKRKEKGFAATLLDDESEVSSELDDEVKALMGSMSLEHSVQDKVSCNDGVVK 180
YQAECP FL+R++K F ATL D++ + +SE D+ +KA + +E D+ C
Sbjct: 282 YQAECPIFLRRQKKNFRATLSDEDID-NSEDDNGIKAFAVCI-IEIDFGDESEC------ 341
Query: 181 TKMCEQNSEHHGTLSYEEISL------------KERTEKLIEDNHRLMSTISELKKELRE 240
E+N + L++EE+ + KER + L+E+N +LMS IS LK + +E
Sbjct: 342 ---FEENYDEE--LTFEELKVLWKEDSEARAIQKERIQDLMEENEQLMSVISSLKLKSKE 401
Query: 241 AKADHD------RLSNSGTDDLEKILSSGKKVSDKRGIRFENSRKLRHISESSLSNRFVP 281
+ D+D ++ NSGT+ L+ IL+SG+ S K G+ F+ S K + + +FVP
Sbjct: 402 VQNDYDQTIKTVKMLNSGTEKLDSILNSGQNSSSKYGLGFDVSVK---SIKPTTEIKFVP 438
BLAST of HG10019010 vs. ExPASy TrEMBL
Match:
A0A5A7UA03 (Gag-proteinase polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold293G00400 PE=4 SV=1)
HSP 1 Score: 105.5 bits (262), Expect = 3.8e-19
Identity = 90/300 (30.00%), Postives = 160/300 (53.33%), Query Frame = 0
Query: 1 MTFEDKNDKKLKGIALQSSISEDSVYKIRDSNENLAESISLLAKQFGKALKRWKKRSGSQ 60
M D+ +KK KG+A +S E++ D+ N+ ESI+LL +QF K ++++K + +
Sbjct: 75 MAISDRENKKGKGVAFKSIYEEETTVNQSDNEANMNESIALLMEQFSKVVRKFKNVNTTG 134
Query: 61 RNYASP-HVKDLSNDISNQNSKLPKQAGKKPDNDKNNCGGQAIRERSFRFHECESFGYYQ 120
N +P H + D N + + + K+ ++ + G+ +SFR EC G+YQ
Sbjct: 135 SNDQNPNHYR--RKDGENTTRRYNEASNKRDEDYRKKKKGEG---KSFRCRECGGVGHYQ 194
Query: 121 AECPNFLKRKEKGFAATLLDDESEVSSELDDEVKALMGSMSLEHSVQDKVSCNDGVVKTK 180
EC FL+R++K F + +S+E D+ K G ++ +V+ D +++
Sbjct: 195 VECSTFLRRQKKNFQKNF---RATLSNEDIDDNKEDNGM----NAFTVRVTETDSDDESE 254
Query: 181 MCEQNSEHHGTLSYEEISL------------KERTEKLIEDNHRLMSTISELKKELREAK 240
E+N ++ L++EE+ + KER + L+E+N RLMS IS LK +L+E +
Sbjct: 255 SSEENYDNE--LTFEELRVLWKEDNEARAIQKERIQDLMEENERLMSIISSLKLKLKEIQ 314
Query: 241 ADHD------RLSNSGTDDLEKILSSGKKVSDKRGIRFENS-RKLRHISESSLSNRFVPA 281
+HD ++ NSG ++L+ IL+ G+ S K G+ F+ S R ++ +E+ +FVPA
Sbjct: 315 NEHDQTIKSVKMLNSGIENLDLILNLGQNNSSKYGLGFDASERSIKPTTET----KFVPA 356
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KAA0045252.1 | 1.8e-20 | 32.24 | gag-proteinase polyprotein [Cucumis melo var. makuwa] >TYK19278.1 gag-proteinase... | [more] |
| KAA0035157.1 | 7.0e-20 | 32.43 | gag-pol polyprotein [Cucumis melo var. makuwa] | [more] |
| KAA0036592.1 | 3.5e-19 | 29.79 | gag-proteinase polyprotein [Cucumis melo var. makuwa] >TYK22629.1 gag-proteinase... | [more] |
| TYK14780.1 | 5.9e-19 | 32.56 | gag-proteinase polyprotein [Cucumis melo var. makuwa] | [more] |
| KAA0050329.1 | 7.7e-19 | 30.00 | gag-proteinase polyprotein [Cucumis melo var. makuwa] >TYK03546.1 gag-proteinase... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5A7TPF7 | 8.9e-21 | 32.24 | Gag-proteinase polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff... | [more] |
| A0A5A7T0Q0 | 3.4e-20 | 32.43 | Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold57G0... | [more] |
| A0A5D3DH72 | 1.7e-19 | 29.79 | Gag-proteinase polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff... | [more] |
| A0A5D3CTL4 | 2.9e-19 | 32.56 | Gag-proteinase polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff... | [more] |
| A0A5A7UA03 | 3.8e-19 | 30.00 | Gag-proteinase polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
