HG10018941 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGATTCAGTGCGACGTGTGCAGCAAAGACGAGGCGCTGCTTTTCTGCACCGCCGACGATGCAGCCCTCTGCTCCGCCTGCGACCACCGCCTCCACCACCCCAATCTCCTCGCCACTAACCACAATCGTTTTCCCCTCCTCCACTCCAACAACAACAGCAACAACCATTTTCCCGTTTGCGATATCTGTCAGGTAAGAATTTTCAGATCTTTCCTAATCTTTTCACCTTACCTTTCTTCAATACTGTTTTGTGTTCTCCAGATCCTGGCGATTTGAAAATTTATGTTGCAGGAAAGACGAGCGTTCTTGTTCTGCCAGCAAGACAGGGCGATTCTGTGCAAAGATTGCGATCTTCCAATACATTCGGCGAATCAACTTACTCGGAATCACCAACGTTTTCTTCTTACTGGTGTTAAGCTTTCTTGTGTTTCTGCATCTCAACCTAATTTTAATTCGCATCCTCTGCCGACGAATGATTCTTGTGTTGCTGAGAGTTCGACTTCTACTGCCCCGACTGCGACTGCTGACGCCATGAATGGTGTGGCAGAGTATTTGATTGAGACGCTTCCTGAATGGCATTTTGAAGAATTTCTTGATTCTTCCTCTACTACTGCTCCTCCTCCTTTTGGTTTCTCTAAGGTCTGCAACTCTGCATTTACATAACCATACTTTTTTTTGGGTGGTCCCCACTTTTAGTGCAATACTTAAGTACAAAAAGGATATATTTTTTAATTATTTAAAAAATTAATCCGAATCAATTTTTAATTGGGTGCCGGTGGGGCTGCACAATACATAGATGCAACATGAGTTTTTTCCCATTTTTAATGGTTCAATTTTAGTTTAGGATGTTAATTATTACCAAAATTGGTTAAATAATAATAATAATAATTTTTATGTAAATAAATATAATGTAGGAATATGTTTTCAAAATTTATAATAAAAATATTAATAGATGAAAACAAAATTTTAAAAATTAACAAAAAAAGGAAAAAAAAAAACTAAAATTGGAGACTGAATTTGAAATTTCTTAAAATGATGAGGAATAAAATTGGACAATTGAAAGTATAAATACTAAAATTGAAAAAATTTCAAAATATACAGACCAAAATGATATTTTAACCTAATTTGTATTTTATTTCATCTTAGTCATGTACTTTCAAATGTCTACTTTTAATTATTGTATTTTCAATAATTTTTAAAGTGTTAGTTTTCAATTTTAGTCTATAAAATTTTAGTCCATAAATTAAAATGTCCAATTTTTCAGTCTATGTATTTTTGAAAAATCTTAAATTCACTCGAAGTTATATTTTATCAAAATTGGTTAAATAATAATTATAATTTAATCGAGTAAAATAACATATATGTTAATATGTTTTCAAAATTTATAATAAAAATGTTAATAGATAATCTTTTTTTTTTTTTTGAAAAAACCGACAATAAACTAATAGGAATGACTAAACTTAAAATTTATTAGAAGTATAAGAACTAAAATTAGACATTTCAAAGTACATGAACTAAATTTGAATAAGTCTAAAAAATATCATTTTAATCTTCTTAAAATTAGGCCTGAAGTTAAGTTTGTAGTTATTTTTTTTTCAAAAAGTAAAATTCTTTGTAAATTTTTAAAATTATTATTATTATTTAACCAGTTTTAATTTAAAAAATTTAATTTATTAAGATCTGGTTTAGTAACCATTTGATCTTTTATTTTTAGTTTTTAAAAATTAAGTCTATAAATACTCATTTCACCCTTAAGTTTCTTTCTTTTTTATCTATCTCTTACCAATTTTTTAAAAAATCAAATCAAAATTTTAAAACTAAAAAATAATTTTTAAAAAACTTGCTTTTAGTTTTGAAATTTGGCTAAGAAATAAACTTAAGGGTGAATTATGAAAGTAGAGAGGAAAATTATATTGTAAAGTTGTTTTTTTGAATAGTGGGAGTGGGAGGGTGTGGAGTGGAGATGGATGTAAAATCAATTTTGATGTTATTTGTATAAATAAACTCAGCTGCAGAGCAATGATGGTGATTGGGTTTTTTCATTTGTTGATGCTGTAGTGGAATTAGAAACCAACCCTACAGATTCTCTCTCACTGCAACACATTCAGATGGAGCTGAAGAAGGAATGTGGCGGTGGTGGAAGCGGCAGCGGCAGCGGTGGAGATTCATCTTTGGTCAGTAACATTCAGATGTTCTTGATTTTAACTATCTGA ATGAAGATTCAGTGCGACGTGTGCAGCAAAGACGAGGCGCTGCTTTTCTGCACCGCCGACGATGCAGCCCTCTGCTCCGCCTGCGACCACCGCCTCCACCACCCCAATCTCCTCGCCACTAACCACAATCGTTTTCCCCTCCTCCACTCCAACAACAACAGCAACAACCATTTTCCCGTTTGCGATATCTGTCAGGAAAGACGAGCGTTCTTGTTCTGCCAGCAAGACAGGGCGATTCTGTGCAAAGATTGCGATCTTCCAATACATTCGGCGAATCAACTTACTCGGAATCACCAACGTTTTCTTCTTACTGGTGTTAAGCTTTCTTGTGTTTCTGCATCTCAACCTAATTTTAATTCGCATCCTCTGCCGACGAATGATTCTTGTGTTGCTGAGAGTTCGACTTCTACTGCCCCGACTGCGACTGCTGACGCCATGAATGGTGTGGCAGAGTATTTGATTGAGACGCTTCCTGAATGGCATTTTGAAGAATTTCTTGATTCTTCCTCTACTACTGCTCCTCCTCCTTTTGGTTTCTCTAAGCTGCAGAGCAATGATGGTGATTGGGTTTTTTCATTTGTTGATGCTGTAGTGGAATTAGAAACCAACCCTACAGATTCTCTCTCACTGCAACACATTCAGATGGAGCTGAAGAAGGAATGTGGCGGTGGTGGAAGCGGCAGCGGCAGCGGTGGAGATTCATCTTTGGTCAGTAACATTCAGATGTTCTTGATTTTAACTATCTGA ATGAAGATTCAGTGCGACGTGTGCAGCAAAGACGAGGCGCTGCTTTTCTGCACCGCCGACGATGCAGCCCTCTGCTCCGCCTGCGACCACCGCCTCCACCACCCCAATCTCCTCGCCACTAACCACAATCGTTTTCCCCTCCTCCACTCCAACAACAACAGCAACAACCATTTTCCCGTTTGCGATATCTGTCAGGAAAGACGAGCGTTCTTGTTCTGCCAGCAAGACAGGGCGATTCTGTGCAAAGATTGCGATCTTCCAATACATTCGGCGAATCAACTTACTCGGAATCACCAACGTTTTCTTCTTACTGGTGTTAAGCTTTCTTGTGTTTCTGCATCTCAACCTAATTTTAATTCGCATCCTCTGCCGACGAATGATTCTTGTGTTGCTGAGAGTTCGACTTCTACTGCCCCGACTGCGACTGCTGACGCCATGAATGGTGTGGCAGAGTATTTGATTGAGACGCTTCCTGAATGGCATTTTGAAGAATTTCTTGATTCTTCCTCTACTACTGCTCCTCCTCCTTTTGGTTTCTCTAAGCTGCAGAGCAATGATGGTGATTGGGTTTTTTCATTTGTTGATGCTGTAGTGGAATTAGAAACCAACCCTACAGATTCTCTCTCACTGCAACACATTCAGATGGAGCTGAAGAAGGAATGTGGCGGTGGTGGAAGCGGCAGCGGCAGCGGTGGAGATTCATCTTTGGTCAGTAACATTCAGATGTTCTTGATTTTAACTATCTGA MKIQCDVCSKDEALLFCTADDAALCSACDHRLHHPNLLATNHNRFPLLHSNNNSNNHFPVCDICQERRAFLFCQQDRAILCKDCDLPIHSANQLTRNHQRFLLTGVKLSCVSASQPNFNSHPLPTNDSCVAESSTSTAPTATADAMNGVAEYLIETLPEWHFEEFLDSSSTTAPPPFGFSKLQSNDGDWVFSFVDAVVELETNPTDSLSLQHIQMELKKECGGGGSGSGSGGDSSLVSNIQMFLILTI Homology
BLAST of HG10018941 vs. NCBI nr
Match: XP_038888878.1 (B-box zinc finger protein 21-like isoform X1 [Benincasa hispida]) HSP 1 Score: 340.1 bits (871), Expect = 1.6e-89 Identity = 177/234 (75.64%), Postives = 193/234 (82.48%), Query Frame = 0
BLAST of HG10018941 vs. NCBI nr
Match: XP_008455255.1 (PREDICTED: B-box zinc finger protein 21-like isoform X1 [Cucumis melo]) HSP 1 Score: 303.1 bits (775), Expect = 2.2e-78 Identity = 160/233 (68.67%), Postives = 184/233 (78.97%), Query Frame = 0
BLAST of HG10018941 vs. NCBI nr
Match: XP_038888879.1 (B-box zinc finger protein 21-like isoform X2 [Benincasa hispida]) HSP 1 Score: 300.1 bits (767), Expect = 1.8e-77 Identity = 153/191 (80.10%), Postives = 165/191 (86.39%), Query Frame = 0
BLAST of HG10018941 vs. NCBI nr
Match: XP_008455256.1 (PREDICTED: B-box zinc finger protein 21-like isoform X2 [Cucumis melo]) HSP 1 Score: 295.4 bits (755), Expect = 4.5e-76 Identity = 157/231 (67.97%), Postives = 183/231 (79.22%), Query Frame = 0
BLAST of HG10018941 vs. NCBI nr
Match: XP_022981859.1 (B-box zinc finger protein 21-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 284.3 bits (726), Expect = 1.0e-72 Identity = 165/278 (59.35%), Postives = 187/278 (67.27%), Query Frame = 0
BLAST of HG10018941 vs. ExPASy Swiss-Prot
Match: Q9LQZ7 (B-box zinc finger protein 21 OS=Arabidopsis thaliana OX=3702 GN=BBX21 PE=1 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 9.5e-45 Identity = 102/217 (47.00%), Postives = 130/217 (59.91%), Query Frame = 0
BLAST of HG10018941 vs. ExPASy Swiss-Prot
Match: Q0IGM7 (B-box zinc finger protein 20 OS=Arabidopsis thaliana OX=3702 GN=BBX20 PE=1 SV=1) HSP 1 Score: 146.4 bits (368), Expect = 4.4e-34 Identity = 86/206 (41.75%), Postives = 115/206 (55.83%), Query Frame = 0
BLAST of HG10018941 vs. ExPASy Swiss-Prot
Match: Q96288 (B-box zinc finger protein 24 OS=Arabidopsis thaliana OX=3702 GN=BBX24 PE=1 SV=1) HSP 1 Score: 129.4 bits (324), Expect = 5.6e-29 Identity = 75/191 (39.27%), Postives = 103/191 (53.93%), Query Frame = 0
BLAST of HG10018941 vs. ExPASy Swiss-Prot
Match: Q9SID1 (B-box zinc finger protein 25 OS=Arabidopsis thaliana OX=3702 GN=BBX25 PE=1 SV=2) HSP 1 Score: 124.0 bits (310), Expect = 2.3e-27 Identity = 73/171 (42.69%), Postives = 95/171 (55.56%), Query Frame = 0
BLAST of HG10018941 vs. ExPASy Swiss-Prot
Match: Q9SYM2 (B-box zinc finger protein 22 OS=Arabidopsis thaliana OX=3702 GN=BBX22 PE=1 SV=2) HSP 1 Score: 123.6 bits (309), Expect = 3.1e-27 Identity = 66/134 (49.25%), Postives = 82/134 (61.19%), Query Frame = 0
BLAST of HG10018941 vs. ExPASy TrEMBL
Match: A0A0A0K5U5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G056460 PE=4 SV=1) HSP 1 Score: 321.6 bits (823), Expect = 2.8e-84 Identity = 179/284 (63.03%), Postives = 206/284 (72.54%), Query Frame = 0
BLAST of HG10018941 vs. ExPASy TrEMBL
Match: A0A1S3C0H6 (B-box zinc finger protein 21-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495463 PE=4 SV=1) HSP 1 Score: 303.1 bits (775), Expect = 1.0e-78 Identity = 160/233 (68.67%), Postives = 184/233 (78.97%), Query Frame = 0
BLAST of HG10018941 vs. ExPASy TrEMBL
Match: A0A1S3C179 (B-box zinc finger protein 21-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103495463 PE=4 SV=1) HSP 1 Score: 295.4 bits (755), Expect = 2.2e-76 Identity = 157/231 (67.97%), Postives = 183/231 (79.22%), Query Frame = 0
BLAST of HG10018941 vs. ExPASy TrEMBL
Match: A0A6J1J300 (B-box zinc finger protein 21-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111480878 PE=4 SV=1) HSP 1 Score: 284.3 bits (726), Expect = 5.0e-73 Identity = 165/278 (59.35%), Postives = 187/278 (67.27%), Query Frame = 0
BLAST of HG10018941 vs. ExPASy TrEMBL
Match: A0A6J1J0U8 (B-box zinc finger protein 21-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111480878 PE=4 SV=1) HSP 1 Score: 282.0 bits (720), Expect = 2.5e-72 Identity = 162/276 (58.70%), Postives = 183/276 (66.30%), Query Frame = 0
BLAST of HG10018941 vs. TAIR 10
Match: AT1G75540.1 (salt tolerance homolog2 ) HSP 1 Score: 181.8 bits (460), Expect = 6.7e-46 Identity = 102/217 (47.00%), Postives = 130/217 (59.91%), Query Frame = 0
BLAST of HG10018941 vs. TAIR 10
Match: AT4G39070.1 (B-box zinc finger family protein ) HSP 1 Score: 146.4 bits (368), Expect = 3.1e-35 Identity = 86/206 (41.75%), Postives = 115/206 (55.83%), Query Frame = 0
BLAST of HG10018941 vs. TAIR 10
Match: AT1G06040.2 (B-box zinc finger family protein ) HSP 1 Score: 131.0 bits (328), Expect = 1.4e-30 Identity = 65/129 (50.39%), Postives = 84/129 (65.12%), Query Frame = 0
BLAST of HG10018941 vs. TAIR 10
Match: AT1G06040.1 (B-box zinc finger family protein ) HSP 1 Score: 129.4 bits (324), Expect = 4.0e-30 Identity = 75/191 (39.27%), Postives = 103/191 (53.93%), Query Frame = 0
BLAST of HG10018941 vs. TAIR 10
Match: AT2G31380.1 (salt tolerance homologue ) HSP 1 Score: 124.0 bits (310), Expect = 1.7e-28 Identity = 73/171 (42.69%), Postives = 95/171 (55.56%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|