HG10018893 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGTTAAAACTAAACATTGATGCTTCGCGTGTTGATCCATCAAGCATCGTGGGTCTGGGATATGTCATTCAAAATTCCAAAGGAGAGGTGTTGGTGGTTGGGGCCGAGTTTTTGGAAAGCACATGTGAGGTTGTGGATGCTGAAGCAATGACCCTTCTTGTTGGGCTCAAGATTGTGGGTGATATGAACATTCAAAATGTTTGGGTCGAATCTAATTCTCAAATCCTGGTTAAAGCTATCCACGATCATTCTATGATACATTCCCGAATTGGGGTTATGTTGGAAGAGATTAGAGAGTGTATGTTTCGTATTCACATTTTTAGGTTATCTTTCATTCCCTGATCTTGTAATTGGGTAGCTCATAAGTTTGTTGGGTTGGCTATCACCAATGTTGATGGTGGGATGTGGACTACTAACATGCCTCATTGGTTAAATTTTTTAATTGAGTATAATGCTCATGGATGTAACCCGTAATGGGATGCATTTTGTTAATAAAATTGGTGATTATAAAAAAAAAAAAAACTCCATGATGTGCATTTTGTTATGATTTAACCAAAAAAAAATGGGAATATTAGAAAATTGATTTCTTTAAGGGGTTGTTTGATGCGCTGAGTTGAGTTCATATGTTCGAAGTTCATATGTCTGTGAAGTTTATATGTTTATGGAGTTCATATGTCTGTGTTTTTAGTATTTGGGGTGCTAAGTTCATATGTTAGGGGTATCTCGTATAATTTTTTTAACATAAATAATATGTTTTTATGATGATTATTTTTGTTTGGAAACTTTTTTATTCAATAATTCTACATATATTTTTTTAATAAGCTATAGAGTTGCATTTTTTTAATTATTTTTTAAACATACATGTATTGTTGGGAGATTTGGGAAATTGGGTTTAGGGTTTACTTTTGGATCTTCAATTTTTTTTTTAAATTTAATCAATCATTTTAAAAATTTGTGCATGTGACGTTTCTAGTTAAGTCATTTGTATTTTCACTTTTGATAAAAACTTTTTTAAAATAAAAACATTCATGTGTCTGACAAATTTTCTCTAAAGTGTTTTTACATACAAGTTTGTTTGATTTCTTACATGATAAAAGTAATTTTATTAATGTTAAATTACGGTAAAGAACGACTATAAAATACTATGAACTAATAAAAAAATGAAAATTCAACGTTTTAACGAAACTTACGTACTTTTGTGTTAACAAATGTGTTTTTATTGACAATTTGCGTCAATTTAGATATAAACATTTATTGATATTTTATATGTATTTTTTAATTAATACTTATATTTAAGCTTTAAATTAAGGTTTTATTGACGGTTTTATGTCATGAGCATCAACAAAACAAAAAAAATTATGTGTCAACAAAGCCCAAATTTGTAGCAGCCATAATTTAAAATAATGGTCGTCGGAGTTGGTGTAGTGACCCCCATTCGAGGTTGTTGGAGTTCGTCGTCAACAATGATAGTTAGATGTTGCTGGAGTTGGCCACAGGCGATGGTTGTCGAAGGTGGTCATCGGAGTTGGTTGTCAGAAGTGGTCTCCGGAGTTGGATGTCGGAGGTGGTCGCCTGAGTTTGGTCGTCAAATGTGGTGTCGGAGTTAGCCGTAGAAGGTTTCATCGAAGTTGGTCGTTAGAGGTGGTCACCGAAGTTGAGCAACGAGACATCTGTGGTGATGAGGGTTGA ATGAAGTTAAAACTAAACATTGATGCTTCGCGTGTTGATCCATCAAGCATCGTGGGTCTGGGATATGTCATTCAAAATTCCAAAGGAGAGGTGTTGGTGGTTGGGGCCGAGTTTTTGGAAAGCACATGTGAGGTTGTGGATGCTGAAGCAATGACCCTTCTTGTTGGGCTCAAGATTGTGGGTGATATGAACATTCAAAATGTTTGGGTCGAATCTAATTCTCAAATCCTGGTTAAAGCTATCCACGATCATTCTATGATACATTCCCGAATTGGGGTTATGTTGGAAGAGATTAGAGAGTATGTTGCTGGAGTTGGCCACAGGCGATGGTTGTCGAAGGTGGTCATCGGAGTTGGTTGTCAGAAGTGGTCTCCGGAGTTGGATGTCGGAGGTGGTCGCCTGAGTTTGGTCGTCAAATGTGGTGTCGGAGTTAGCCGTAGAAGGTTTCATCGAAGTTGGTCGTTAGAGGTGGTCACCGAAGTTGAGCAACGAGACATCTGTGGTGATGAGGGTTGA ATGAAGTTAAAACTAAACATTGATGCTTCGCGTGTTGATCCATCAAGCATCGTGGGTCTGGGATATGTCATTCAAAATTCCAAAGGAGAGGTGTTGGTGGTTGGGGCCGAGTTTTTGGAAAGCACATGTGAGGTTGTGGATGCTGAAGCAATGACCCTTCTTGTTGGGCTCAAGATTGTGGGTGATATGAACATTCAAAATGTTTGGGTCGAATCTAATTCTCAAATCCTGGTTAAAGCTATCCACGATCATTCTATGATACATTCCCGAATTGGGGTTATGTTGGAAGAGATTAGAGAGTATGTTGCTGGAGTTGGCCACAGGCGATGGTTGTCGAAGGTGGTCATCGGAGTTGGTTGTCAGAAGTGGTCTCCGGAGTTGGATGTCGGAGGTGGTCGCCTGAGTTTGGTCGTCAAATGTGGTGTCGGAGTTAGCCGTAGAAGGTTTCATCGAAGTTGGTCGTTAGAGGTGGTCACCGAAGTTGAGCAACGAGACATCTGTGGTGATGAGGGTTGA MKLKLNIDASRVDPSSIVGLGYVIQNSKGEVLVVGAEFLESTCEVVDAEAMTLLVGLKIVGDMNIQNVWVESNSQILVKAIHDHSMIHSRIGVMLEEIREYVAGVGHRRWLSKVVIGVGCQKWSPELDVGGGRLSLVVKCGVGVSRRRFHRSWSLEVVTEVEQRDICGDEG Homology
BLAST of HG10018893 vs. NCBI nr
Match: XP_042974660.1 (uncharacterized protein LOC122306292 [Carya illinoinensis]) HSP 1 Score: 67.0 bits (162), Expect = 1.8e-07 Identity = 34/103 (33.01%), Postives = 61/103 (59.22%), Query Frame = 0
BLAST of HG10018893 vs. NCBI nr
Match: XP_042965938.1 (uncharacterized protein LOC122299618 [Carya illinoinensis]) HSP 1 Score: 63.9 bits (154), Expect = 1.5e-06 Identity = 34/108 (31.48%), Postives = 60/108 (55.56%), Query Frame = 0
BLAST of HG10018893 vs. NCBI nr
Match: PRQ49904.1 (putative ribonuclease H-like domain-containing protein [Rosa chinensis]) HSP 1 Score: 62.0 bits (149), Expect = 5.8e-06 Identity = 36/102 (35.29%), Postives = 58/102 (56.86%), Query Frame = 0
BLAST of HG10018893 vs. NCBI nr
Match: XP_019190496.1 (PREDICTED: uncharacterized protein LOC109184955 [Ipomoea nil]) HSP 1 Score: 61.2 bits (147), Expect = 9.8e-06 Identity = 37/113 (32.74%), Postives = 64/113 (56.64%), Query Frame = 0
BLAST of HG10018893 vs. NCBI nr
Match: CAE5963715.1 (unnamed protein product [Arabidopsis arenosa]) HSP 1 Score: 60.8 bits (146), Expect = 1.3e-05 Identity = 35/101 (34.65%), Postives = 56/101 (55.45%), Query Frame = 0
BLAST of HG10018893 vs. ExPASy TrEMBL
Match: A0A2P6RTZ7 (Putative ribonuclease H-like domain-containing protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0127141 PE=4 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 2.8e-06 Identity = 36/102 (35.29%), Postives = 58/102 (56.86%), Query Frame = 0
BLAST of HG10018893 vs. ExPASy TrEMBL
Match: A0A803QGE0 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 1.4e-05 Identity = 33/106 (31.13%), Postives = 61/106 (57.55%), Query Frame = 0
BLAST of HG10018893 vs. ExPASy TrEMBL
Match: A0A2I4FCK8 (uncharacterized protein LOC108997520 OS=Juglans regia OX=51240 GN=LOC108997520 PE=4 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 1.8e-05 Identity = 31/107 (28.97%), Postives = 61/107 (57.01%), Query Frame = 0
BLAST of HG10018893 vs. ExPASy TrEMBL
Match: M5X848 (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_3G063400 PE=4 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 2.4e-05 Identity = 32/98 (32.65%), Postives = 54/98 (55.10%), Query Frame = 0
BLAST of HG10018893 vs. ExPASy TrEMBL
Match: A0A5E4ET70 (PREDICTED: reverse mRNAase OS=Prunus dulcis OX=3755 GN=ALMOND_2B008911 PE=4 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 3.1e-05 Identity = 33/98 (33.67%), Postives = 53/98 (54.08%), Query Frame = 0
BLAST of HG10018893 vs. TAIR 10
Match: AT5G65005.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein ) HSP 1 Score: 46.2 bits (108), Expect = 3.0e-05 Identity = 27/101 (26.73%), Postives = 54/101 (53.47%), Query Frame = 0
BLAST of HG10018893 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein ) HSP 1 Score: 41.6 bits (96), Expect = 7.5e-04 Identity = 24/81 (29.63%), Postives = 44/81 (54.32%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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