HG10018776 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10018776
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	RING-type domain-containing protein
Location	Chr04: 8297130 .. 8297881 (-)
RNA-Seq Expression	HG10018776
Synteny	HG10018776

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGCACAAATGTTTGAAATTTGTAGGAATGATCCTTCCTACATTGGTATGTCACTCACAATTAAAGACATATTCAAACTCGACAAAATTCATCAACATTTATTAAACAAATCGATCTGAATTTCAAAGTCCAACTCAAATGTAGTCTCTACCAAATATATGAAGAAGGCAATAGGAATACATCATCTTTCCTCGGTGAAGACATGTCTTCACAACATCCCTTTGCTACATACCAAATTCTTGTCTCCATCTTAAAACACGGCGACAAAACTTTGGAGCGACATCTATTGCAGCAGTTTCGGAGGTATAGAGACATCATCAATATCAAACTTGTGGCTAATGAAATAATAAAATACTGGGTTAGAAAAGTCGAAGAAGAAGAGGAGGATAATTTTAGGGTGTTTGGAAAGGTTTATCCTCTCGAAATTACGATAGAACTGTTGCTTTTTGAGAGAGTTGACAATGACACGATAGAAGTACCGTTAATGATGGTTCCAGCCAATAATAGCGCAATGGAGAGTATGTTAAAGAGAATGGAGATCGAAGAGATAATGAAATTAAGTGATGATGAAAGCATTAATTGCGTAATTTGTATGGAGGAAATTAGTAGAGAAGAGGAAGGAAAAAGTGGGACATTTGTGTTACAAATGCCTTGCTTGCATATGTTTCATGAAGAATGTATAAAGAAGTGGTCGAAGAGTAGTCATTATTGTCCAACTTGTAGATTTTCAATGCCTACAAATGATTGA

mRNA sequence

ATGGCGGCACAAATGTTTGAAATTTGTAGGAATGATCCTTCCTACATTGTCCAACTCAAATGTAGTCTCTACCAAATATATGAAGAAGGCAATAGGAATACATCATCTTTCCTCGGTGAAGACATGTCTTCACAACATCCCTTTGCTACATACCAAATTCTTGTCTCCATCTTAAAACACGGCGACAAAACTTTGGAGCGACATCTATTGCAGCAGTTTCGGAGGTATAGAGACATCATCAATATCAAACTTGTGGCTAATGAAATAATAAAATACTGGGTTAGAAAAGTCGAAGAAGAAGAGGAGGATAATTTTAGGGTGTTTGGAAAGGTTTATCCTCTCGAAATTACGATAGAACTGTTGCTTTTTGAGAGAGTTGACAATGACACGATAGAAGTACCGTTAATGATGGTTCCAGCCAATAATAGCGCAATGGAGAGTATGTTAAAGAGAATGGAGATCGAAGAGATAATGAAATTAAGTGATGATGAAAGCATTAATTGCGTAATTTGTATGGAGGAAATTAGTAGAGAAGAGGAAGGAAAAAGTGGGACATTTGTGTTACAAATGCCTTGCTTGCATATGTTTCATGAAGAATGTATAAAGAAGTGGTCGAAGAGTAGTCATTATTGTCCAACTTGTAGATTTTCAATGCCTACAAATGATTGA

Coding sequence (CDS)

ATGGCGGCACAAATGTTTGAAATTTGTAGGAATGATCCTTCCTACATTGTCCAACTCAAATGTAGTCTCTACCAAATATATGAAGAAGGCAATAGGAATACATCATCTTTCCTCGGTGAAGACATGTCTTCACAACATCCCTTTGCTACATACCAAATTCTTGTCTCCATCTTAAAACACGGCGACAAAACTTTGGAGCGACATCTATTGCAGCAGTTTCGGAGGTATAGAGACATCATCAATATCAAACTTGTGGCTAATGAAATAATAAAATACTGGGTTAGAAAAGTCGAAGAAGAAGAGGAGGATAATTTTAGGGTGTTTGGAAAGGTTTATCCTCTCGAAATTACGATAGAACTGTTGCTTTTTGAGAGAGTTGACAATGACACGATAGAAGTACCGTTAATGATGGTTCCAGCCAATAATAGCGCAATGGAGAGTATGTTAAAGAGAATGGAGATCGAAGAGATAATGAAATTAAGTGATGATGAAAGCATTAATTGCGTAATTTGTATGGAGGAAATTAGTAGAGAAGAGGAAGGAAAAAGTGGGACATTTGTGTTACAAATGCCTTGCTTGCATATGTTTCATGAAGAATGTATAAAGAAGTGGTCGAAGAGTAGTCATTATTGTCCAACTTGTAGATTTTCAATGCCTACAAATGATTGA

Protein sequence

MAAQMFEICRNDPSYIVQLKCSLYQIYEEGNRNTSSFLGEDMSSQHPFATYQILVSILKHGDKTLERHLLQQFRRYRDIINIKLVANEIIKYWVRKVEEEEEDNFRVFGKVYPLEITIELLLFERVDNDTIEVPLMMVPANNSAMESMLKRMEIEEIMKLSDDESINCVICMEEISREEEGKSGTFVLQMPCLHMFHEECIKKWSKSSHYCPTCRFSMPTND

Homology

[Close]

BLAST of HG10018776 vs. NCBI nr
Match: ADN34252.1 (hypothetical zinc finger protein [Cucumis melo subsp. melo] >KAA0031412.1 putative zinc finger protein [Cucumis melo var. makuwa] >TYK06863.1 putative zinc finger protein [Cucumis melo var. makuwa])

HSP 1 Score: 253.4 bits (646), Expect = 1.7e-63
Identity = 132/214 (61.68%), Postives = 169/214 (78.97%), Query Frame = 0


Query: 17  VQLKCSLYQIYEEGNRNTSSFLGEDMSSQHPFATYQILVSILKHGDKTLERHLLQQFRRY 76
           VQLKC  +Q++E GN ++++ + E + SQH FAT+Q+ +SI KHGDKTL+R L ++F+ Y
Sbjct: 54  VQLKCQHFQVWEGGNGHSTTLVREHIRSQHSFATFQLPISIFKHGDKTLKRILFREFKMY 113

Query: 77  RDIINIKLVANEIIKYWVRKVEEEE--EDNFRV-FGKVYPLEITIELLLFERVDN----- 136
            DIINI+L+ANEIIK+WVRKVEEEE  E+N  V F K+YPLEI I LL+ + +       
Sbjct: 114 GDIINIELLANEIIKHWVRKVEEEEDQENNSNVLFKKIYPLEIMIRLLVSKMIRAVQPRL 173

Query: 137 DTIEVPLMMVPANNSAMESMLKRMEIEEIMKLSDDESINCVICMEEISREEEGKSGTFVL 196
             I+ PL MVP ++SA+ESMLKR+E EEIMK  DDESINCV+C+EEIS+EE+G S T VL
Sbjct: 174 AMIDQPL-MVPTSDSAVESMLKRVENEEIMKSGDDESINCVVCLEEISKEEKG-SETTVL 233

Query: 197 QMPCLHMFHEECIKKWSKSSHYCPTCRFSMPTND 223
           QMPCLHMFHEECI+KW K+SHYCPTCRFSMP ++
Sbjct: 234 QMPCLHMFHEECIRKWLKTSHYCPTCRFSMPIDN 265

[Close]

BLAST of HG10018776 vs. NCBI nr
Match: KAE8645828.1 (hypothetical protein Csa_017274 [Cucumis sativus])

HSP 1 Score: 245.0 bits (624), Expect = 6.2e-61
Identity = 121/217 (55.76%), Postives = 167/217 (76.96%), Query Frame = 0


Query: 12  DPSYIVQLKCSLYQIYEEGNRNTSSFLGEDMSSQHPFATYQILVSILKHGDKTLERHLLQ 71
           D ++ V++KC  +Q  EE     ++FL E + +  PF   Q+ VSI KHGDKTL+R L Q
Sbjct: 305 DLNFKVEVKCQHFQAGEEDTTFATTFLSEHIIAHQPFPALQLPVSIFKHGDKTLKRLLFQ 364

Query: 72  QFRRYRDIINIKLVANEIIKYWVRKVEEEEEDNFRVFGKVYPLEITIELLLFERVD---- 131
           +F+ +R IINI+LV ++IIK+WV+KVE+++E+N  VF ++YPLEITIE+L+ + +D    
Sbjct: 365 KFQMFRAIINIELVTDQIIKHWVKKVEDDKENNSGVFEEIYPLEITIEVLVLQMIDAVDQ 424

Query: 132 -NDTIEVP-LMMVPANNSAMESMLKRMEIEEIMKLSDDESINCVICMEEISREEEGKSGT 191
             +TI+ P + MVP ++SAM+SMLKR+E EEIMK+ D +SI+CVIC+E+IS+EE+G  G 
Sbjct: 425 PQETIDQPQVRMVPTSDSAMKSMLKRVENEEIMKVGDYKSISCVICLEKISKEEKGSEGV 484

Query: 192 FVLQMPCLHMFHEECIKKWSKSSHYCPTCRFSMPTND 223
            VLQMPCLHMFHEECI+KW K+SHYCPTCRFSMP N+
Sbjct: 485 -VLQMPCLHMFHEECIRKWLKTSHYCPTCRFSMPINN 520

[Close]

BLAST of HG10018776 vs. NCBI nr
Match: KGN43799.1 (hypothetical protein Csa_017222 [Cucumis sativus])

HSP 1 Score: 238.0 bits (606), Expect = 7.6e-59
Identity = 120/226 (53.10%), Postives = 167/226 (73.89%), Query Frame = 0


Query: 11  NDPSYI--------VQLKCSLYQIYEEGNRNTSSFLGEDMSSQHPFATYQILVSILKHGD 70
           N P+++        V++KC  +Q  EEG+   S+ + E + S HPF T+Q+ VS+ +HG+
Sbjct: 40  NSPTFVKQINLKLKVEVKCQHFQADEEGDTFASTLMIEHIVSHHPFPTFQLPVSVFRHGN 99

Query: 71  KTLERHLLQQFRRYRDIINIKLVANEIIKYWVRKVEEEEEDNFRVFGKVYPLEITIELLL 130
           +TL+R L QQF+ +R IINI+LVA+EII++WV+K E+ E ++  +  ++YPLEITIELLL
Sbjct: 100 RTLKRLLFQQFQIFRGIINIQLVADEIIEHWVKKEEDRENNSGVLLEEIYPLEITIELLL 159

Query: 131 FERV-----DNDTIEVP-LMMVPANNSAMESMLKRMEIEEIMKLSDDESINCVICMEEIS 190
              +       +TI+ P + MVPA+ SAMESMLKR+E EEI+K+ +D+SINCVIC+EEIS
Sbjct: 160 LRMIHAIDQPEETIDQPQVTMVPASESAMESMLKRVEKEEIVKVGEDKSINCVICLEEIS 219

Query: 191 REEEGKSGTFVLQMPCLHMFHEECIKKWSKSSHYCPTCRFSMPTND 223
           ++ +G  G  VLQMPCLHMFHEECI+ W K+SHYCPTCRFSMP N+
Sbjct: 220 KKMKGSEGV-VLQMPCLHMFHEECIRTWLKTSHYCPTCRFSMPINN 264

[Close]

BLAST of HG10018776 vs. NCBI nr
Match: KAA0031411.1 (putative zinc finger protein [Cucumis melo var. makuwa])

HSP 1 Score: 236.1 bits (601), Expect = 2.9e-58
Identity = 130/268 (48.51%), Postives = 170/268 (63.43%), Query Frame = 0


Query: 1   MAAQMFEICRNDP-------------------------------------SYIVQLKCSL 60
           MAAQ+F ICRN P                                     ++ VQLKCS 
Sbjct: 1   MAAQIFNICRNRPFVGMSLEINDSITSMNRTRKRIRTRQNSSKYVQHIDLNFKVQLKCSH 60

Query: 61  YQIYEEGNRNTSSFLGEDMSSQHPFATYQILVSILKHGDKTLERHLLQQFRRYRDIINIK 120
           + +YE+G   T+SFL E  S  HP ATY++ +SI KHGDK LE++L  +F  YR+ INI 
Sbjct: 61  FLVYEDGITTTTSFLNEHTSRPHPLATYKLPISIFKHGDKALEQYLFHKFHVYREFINIT 120

Query: 121 LVANEIIKYWVRKVEE-----EEEDN---FRVFGKVYPLEITIELLLFERVDNDTIEVPL 180
           LVA+ +I++WV++VEE     +EE+N   F VF K+YPLEIT+E+ + +R      E P+
Sbjct: 121 LVADRLIQHWVKRVEEDDHEYQEENNNHDFNVFQKIYPLEITLEMQIIQRY---VEESPI 180

Query: 181 M-MVPANNSAMESMLKRMEIEEIMKLSDDESINCVICMEEISREEEGKSGTFVLQMPCLH 223
           M MVP ++SA+ESML+R+E +      DDE INCVIC+EEIS +EE ++   VLQMPCLH
Sbjct: 181 MIMVPTSDSAIESMLRRVEND-----WDDEGINCVICLEEISSKEEEETEKSVLQMPCLH 240

[Close]

BLAST of HG10018776 vs. NCBI nr
Match: TYK06862.1 (putative zinc finger protein [Cucumis melo var. makuwa])

HSP 1 Score: 235.3 bits (599), Expect = 4.9e-58
Identity = 130/268 (48.51%), Postives = 169/268 (63.06%), Query Frame = 0


Query: 1   MAAQMFEICRNDP-------------------------------------SYIVQLKCSL 60
           MAAQ+F ICRN P                                     ++ VQLKCS 
Sbjct: 1   MAAQIFNICRNRPFVGMSLEINDSITSMNRTRKRIRTRQNSSKYVQHIDLNFKVQLKCSH 60

Query: 61  YQIYEEGNRNTSSFLGEDMSSQHPFATYQILVSILKHGDKTLERHLLQQFRRYRDIINIK 120
           + +YE+G   T+SFL E  S  HP ATY++ +SI KHGDK LE++L  +F  YR+ IN  
Sbjct: 61  FLVYEDGITTTTSFLNEHTSRPHPLATYKLPISIFKHGDKALEQYLFHKFHVYREFINTT 120

Query: 121 LVANEIIKYWVRKVEE-----EEEDN---FRVFGKVYPLEITIELLLFERVDNDTIEVPL 180
           LVA+ +I++WV++VEE     +EE+N   F VF K+YPLEIT+E+ + +R      E P+
Sbjct: 121 LVADRLIQHWVKRVEEDDHEHQEENNNHDFNVFQKIYPLEITLEMRIIQRY---VEESPI 180

Query: 181 M-MVPANNSAMESMLKRMEIEEIMKLSDDESINCVICMEEISREEEGKSGTFVLQMPCLH 223
           M MVP ++SA+ESML+R+E +      DDE INCVIC+EEIS +EE +S   VLQMPCLH
Sbjct: 181 MIMVPTSDSAIESMLRRVEND-----WDDEGINCVICLEEISSKEEEESEKSVLQMPCLH 240

[Close]

BLAST of HG10018776 vs. ExPASy Swiss-Prot
Match: Q8LPN7 (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19950 PE=1 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 1.2e-09
Identity = 29/84 (34.52%), Postives = 50/84 (59.52%), Query Frame = 0


Query: 139 PANNSAMESMLKRMEIEEIMKLSDDESINCVICMEEISREEEGKSGTFVLQMPCLHMFHE 198
           PA+ SA++++      ++++K    E   C +CM+E       + G+ V QMPC H+FH+
Sbjct: 190 PASKSAIDALPTVKVTKDMLK---SEMNQCAVCMDEF------EDGSDVKQMPCKHVFHQ 249

Query: 199 ECIKKWSKSSHYCPTCRFSMPTND 223
           +C+  W +  + CP CRF +PT+D
Sbjct: 250 DCLLPWLELHNSCPVCRFELPTDD 264

[Close]

BLAST of HG10018776 vs. ExPASy Swiss-Prot
Match: Q940T5 (E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana OX=3702 GN=DURF2 PE=1 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.3e-08
Identity = 32/82 (39.02%), Postives = 46/82 (56.10%), Query Frame = 0


Query: 139 PANNSAMESMLKRMEIEEIMKLSDDESINCVICMEEISREEEGKSGTFVLQMPCLHMFHE 198
           PA+ SA+ES L R+EI +    S+    NC +C E    E E +      +MPC H+FH+
Sbjct: 174 PASKSAIES-LPRVEISDCHIGSE---ANCAVCTEIFETETEAR------EMPCKHLFHD 233

Query: 199 ECIKKWSKSSHYCPTCRFSMPT 221
           +CI  W    + CP CRF +P+
Sbjct: 234 DCIVPWLSIRNSCPVCRFELPS 245

[Close]

BLAST of HG10018776 vs. ExPASy Swiss-Prot
Match: Q9SNB6 (E3 ubiquitin-protein ligase RDUF1 OS=Arabidopsis thaliana OX=3702 GN=RDUF1 PE=1 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 4.9e-08
Identity = 31/83 (37.35%), Postives = 46/83 (55.42%), Query Frame = 0


Query: 139 PANNSAMESMLKRMEIEEIMKLSDDESINCVICMEEISREEEGKSGTFVLQMPCLHMFHE 198
           PA+ SA+ES L R+EI +    ++    NC +C E      EG+      +MPC H+FH 
Sbjct: 190 PASKSAIES-LPRVEISDCHTKAE---ANCAVCTEVFEAGIEGR------EMPCKHIFHG 249

Query: 199 ECIKKWSKSSHYCPTCRFSMPTN 222
           +CI  W    + CP CRF +P++
Sbjct: 250 DCIVPWLSIRNSCPVCRFELPSD 262

[Close]

BLAST of HG10018776 vs. ExPASy Swiss-Prot
Match: P0CH30 (E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 8.3e-08
Identity = 28/85 (32.94%), Postives = 48/85 (56.47%), Query Frame = 0


Query: 139 PANNSAMESMLKRMEIEEIMKLSDDESIN-CVICMEEISREEEGKSGTFVLQMPCLHMFH 198
           PA+ SA+E+    + +  I K + +   N C +CM++       + GT   QMPC H++H
Sbjct: 198 PASKSAIEA----LPLVNITKSNLNSEFNQCAVCMDDF------EEGTEAKQMPCKHLYH 257

Query: 199 EECIKKWSKSSHYCPTCRFSMPTND 223
           ++C+  W +  + CP CR  +PT+D
Sbjct: 258 KDCLLPWLELHNSCPVCRHELPTDD 272

[Close]

BLAST of HG10018776 vs. ExPASy Swiss-Prot
Match: Q9VE61 (E3 ubiquitin-protein ligase RNF181 homolog OS=Drosophila melanogaster OX=7227 GN=CG7694 PE=2 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 2.4e-07
Identity = 31/92 (33.70%), Postives = 46/92 (50.00%), Query Frame = 0


Query: 131 IEVPLMMVPANNSAMESMLKRMEIEEIMKLSDDESINCVICMEEISREEEGKSGTFVLQM 190
           IEVP         A +  +  + + EI+K  +   + C +C E     EEG+       +
Sbjct: 41  IEVP--------EASKRAILELPVHEIVKSDEGGDLECSVCKEP---AEEGQKYRI---L 100

Query: 191 PCLHMFHEECIKKWSKSSHYCPTCRFSMPTND 223
           PC H FHEECI  W K ++ CP CR+ + T+D
Sbjct: 101 PCKHEFHEECILLWLKKTNSCPLCRYELETDD 118

[Close]

BLAST of HG10018776 vs. ExPASy TrEMBL
Match: A0A5D3C4K6 (Putative zinc finger protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G001670 PE=4 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 8.5e-64
Identity = 132/214 (61.68%), Postives = 169/214 (78.97%), Query Frame = 0


Query: 17  VQLKCSLYQIYEEGNRNTSSFLGEDMSSQHPFATYQILVSILKHGDKTLERHLLQQFRRY 76
           VQLKC  +Q++E GN ++++ + E + SQH FAT+Q+ +SI KHGDKTL+R L ++F+ Y
Sbjct: 54  VQLKCQHFQVWEGGNGHSTTLVREHIRSQHSFATFQLPISIFKHGDKTLKRILFREFKMY 113

Query: 77  RDIINIKLVANEIIKYWVRKVEEEE--EDNFRV-FGKVYPLEITIELLLFERVDN----- 136
            DIINI+L+ANEIIK+WVRKVEEEE  E+N  V F K+YPLEI I LL+ + +       
Sbjct: 114 GDIINIELLANEIIKHWVRKVEEEEDQENNSNVLFKKIYPLEIMIRLLVSKMIRAVQPRL 173

Query: 137 DTIEVPLMMVPANNSAMESMLKRMEIEEIMKLSDDESINCVICMEEISREEEGKSGTFVL 196
             I+ PL MVP ++SA+ESMLKR+E EEIMK  DDESINCV+C+EEIS+EE+G S T VL
Sbjct: 174 AMIDQPL-MVPTSDSAVESMLKRVENEEIMKSGDDESINCVVCLEEISKEEKG-SETTVL 233

Query: 197 QMPCLHMFHEECIKKWSKSSHYCPTCRFSMPTND 223
           QMPCLHMFHEECI+KW K+SHYCPTCRFSMP ++
Sbjct: 234 QMPCLHMFHEECIRKWLKTSHYCPTCRFSMPIDN 265

[Close]

BLAST of HG10018776 vs. ExPASy TrEMBL
Match: E5GCQ3 (Hypothetical zinc finger protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 8.5e-64
Identity = 132/214 (61.68%), Postives = 169/214 (78.97%), Query Frame = 0


Query: 17  VQLKCSLYQIYEEGNRNTSSFLGEDMSSQHPFATYQILVSILKHGDKTLERHLLQQFRRY 76
           VQLKC  +Q++E GN ++++ + E + SQH FAT+Q+ +SI KHGDKTL+R L ++F+ Y
Sbjct: 54  VQLKCQHFQVWEGGNGHSTTLVREHIRSQHSFATFQLPISIFKHGDKTLKRILFREFKMY 113

Query: 77  RDIINIKLVANEIIKYWVRKVEEEE--EDNFRV-FGKVYPLEITIELLLFERVDN----- 136
            DIINI+L+ANEIIK+WVRKVEEEE  E+N  V F K+YPLEI I LL+ + +       
Sbjct: 114 GDIINIELLANEIIKHWVRKVEEEEDQENNSNVLFKKIYPLEIMIRLLVSKMIRAVQPRL 173

Query: 137 DTIEVPLMMVPANNSAMESMLKRMEIEEIMKLSDDESINCVICMEEISREEEGKSGTFVL 196
             I+ PL MVP ++SA+ESMLKR+E EEIMK  DDESINCV+C+EEIS+EE+G S T VL
Sbjct: 174 AMIDQPL-MVPTSDSAVESMLKRVENEEIMKSGDDESINCVVCLEEISKEEKG-SETTVL 233

Query: 197 QMPCLHMFHEECIKKWSKSSHYCPTCRFSMPTND 223
           QMPCLHMFHEECI+KW K+SHYCPTCRFSMP ++
Sbjct: 234 QMPCLHMFHEECIRKWLKTSHYCPTCRFSMPIDN 265

[Close]

BLAST of HG10018776 vs. ExPASy TrEMBL
Match: A0A0A0K2A5 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G068580 PE=4 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 1.1e-63
Identity = 130/216 (60.19%), Postives = 163/216 (75.46%), Query Frame = 0


Query: 12  DPSYIVQLKCSLYQIYEEGNRNTSSFLGEDMSSQHPFATYQILVSILKHGDKTLERHLLQ 71
           D ++ VQLKC  +QI EE   NT++ + E + SQHPFAT+++ +SIL+HGDKTL+  L +
Sbjct: 49  DLNFEVQLKCQHFQIREEETSNTTTLIDEHIVSQHPFATFRLPISILEHGDKTLKLLLFR 108

Query: 72  QFRRYRDIINIKLVANEIIKYWVRKVEEEEED-----NFRVFGKVYPLEITIELLLFERV 131
           +F  YRDIINI+ + +EIIKYWV KVEEEEED     + RVF K+Y LEIT+ELL+F+ V
Sbjct: 109 EFHMYRDIINIEHLVDEIIKYWVTKVEEEEEDQENSTSSRVFKKIYRLEITLELLIFQIV 168

Query: 132 D-NDTIEVPLMMVPANNSAMESMLKRMEIEEIMKLSDDESINCVICMEEISREEEGKSGT 191
              D     LMMVP ++SAMESMLKR+E EEIMKL DD+ I+CVIC+EEI +EE+G  G 
Sbjct: 169 RVMDYQPQVLMMVPTSDSAMESMLKRVENEEIMKLGDDDCIHCVICLEEIGKEEKGSEGV 228

Query: 192 FVLQMPCLHMFHEECIKKWSKSSHYCPTCRFSMPTN 222
            VLQMPCLH+FH ECI KW  +SHYCPTCRF MP N
Sbjct: 229 -VLQMPCLHVFHGECINKWLNTSHYCPTCRFPMPIN 263

[Close]

BLAST of HG10018776 vs. ExPASy TrEMBL
Match: A0A0A0K2A1 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G067550 PE=4 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 2.5e-60
Identity = 120/217 (55.30%), Postives = 166/217 (76.50%), Query Frame = 0


Query: 12  DPSYIVQLKCSLYQIYEEGNRNTSSFLGEDMSSQHPFATYQILVSILKHGDKTLERHLLQ 71
           D ++ V++KC  +Q  EE     ++FL E + +  PF   Q+ VSI KHGDKTL+R L Q
Sbjct: 39  DLNFKVEVKCQHFQAGEEDTTFATTFLSEHIIAHQPFPALQLPVSIFKHGDKTLKRLLFQ 98

Query: 72  QFRRYRDIINIKLVANEIIKYWVRKVEEEEEDNFRVFGKVYPLEITIELLLFERVD---- 131
           +F+ +R IINI+LV ++IIK+WV+KVE+++E+N  VF ++YPLEITIE+L+ + +D    
Sbjct: 99  KFQMFRAIINIELVTDQIIKHWVKKVEDDKENNSGVFEEIYPLEITIEVLVLQMIDAVDQ 158

Query: 132 -NDTIEVP-LMMVPANNSAMESMLKRMEIEEIMKLSDDESINCVICMEEISREEEGKSGT 191
             +TI+ P + MVP ++SAM+SMLKR+E EEIMK+ D +SI+CVIC+E+IS+EE+G  G 
Sbjct: 159 PQETIDQPQVRMVPTSDSAMKSMLKRVENEEIMKVGDYKSISCVICLEKISKEEKGSEGV 218

Query: 192 FVLQMPCLHMFHEECIKKWSKSSHYCPTCRFSMPTND 223
            VLQMPCLHMFHEECI+KW K+SHYCPTCRFSM  N+
Sbjct: 219 -VLQMPCLHMFHEECIRKWLKTSHYCPTCRFSMTINN 254

[Close]

BLAST of HG10018776 vs. ExPASy TrEMBL
Match: A0A0A0K7L0 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G067560 PE=4 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 3.7e-59
Identity = 125/222 (56.31%), Postives = 165/222 (74.32%), Query Frame = 0


Query: 12  DPSYIVQLKCSLYQIYEEGNRNT--SSFLGEDMSSQHPFATYQILVSILKHGDKTLERHL 71
           D ++ V++KC  Y    EG  +T  ++ L E +SS HP  T Q+ VSI KHGDKTL+R L
Sbjct: 50  DLNFKVEVKCQHYFQAGEGGNSTFATALLSEHISSHHPLPTLQLPVSIFKHGDKTLKRLL 109

Query: 72  LQQFRRYRDIINIKLVANEIIKYWVRKVEEEEEDNFRVFGKVYPLEITIELLLFERVDND 131
            ++F+ YR IINI+LV +EIIK+WV+KV+EE   + +VF ++YPLEITIELL+++ +   
Sbjct: 110 FREFQIYRAIINIELVVDEIIKHWVKKVDEENSTS-QVFEEIYPLEITIELLVYQMI--H 169

Query: 132 TIEVP---------LMMVPANNSAMESMLKRMEIEEIMKLSDDESINCVICMEEISREEE 191
            I+ P         +MMVP + SAMESMLK++E EEI+K  D++SINCVIC+EEIS+E++
Sbjct: 170 AIDQPHEIMMDQPQVMMVPTSESAMESMLKKVENEEIVKFGDNKSINCVICLEEISKEKK 229

Query: 192 GKSGTFVLQMPCLHMFHEECIKKWSKSSHYCPTCRFSMPTND 223
           G S   VLQMPCLHMFHEECI+KW K SHYCPTCRFSMPTN+
Sbjct: 230 G-SEAVVLQMPCLHMFHEECIRKWLKRSHYCPTCRFSMPTNN 267

[Close]

BLAST of HG10018776 vs. TAIR 10
Match: AT3G19950.1 (RING/U-box superfamily protein )

HSP 1 Score: 65.1 bits (157), Expect = 8.2e-11
Identity = 29/84 (34.52%), Postives = 50/84 (59.52%), Query Frame = 0


Query: 139 PANNSAMESMLKRMEIEEIMKLSDDESINCVICMEEISREEEGKSGTFVLQMPCLHMFHE 198
           PA+ SA++++      ++++K    E   C +CM+E       + G+ V QMPC H+FH+
Sbjct: 190 PASKSAIDALPTVKVTKDMLK---SEMNQCAVCMDEF------EDGSDVKQMPCKHVFHQ 249

Query: 199 ECIKKWSKSSHYCPTCRFSMPTND 223
           +C+  W +  + CP CRF +PT+D
Sbjct: 250 DCLLPWLELHNSCPVCRFELPTDD 264

[Close]

BLAST of HG10018776 vs. TAIR 10
Match: AT1G18760.1 (Zinc finger, C3HC4 type (RING finger) family protein )

HSP 1 Score: 62.8 bits (151), Expect = 4.1e-10
Identity = 29/84 (34.52%), Postives = 45/84 (53.57%), Query Frame = 0


Query: 139 PANNSAMESMLKRMEIEEIMKLSDDESINCVICMEEISREEEGKSGTFVLQMPCLHMFHE 198
           PAN   + S+ ++     I K +   +  C IC+EE +       GT V+ +PC H F +
Sbjct: 151 PANKLVVNSLARK-----IYKKTTSSTERCTICLEEFN------DGTKVMTLPCGHEFDD 210

Query: 199 ECIKKWSKSSHYCPTCRFSMPTND 223
           EC+  W +++H CP CRF +P  D
Sbjct: 211 ECVLTWFETNHDCPLCRFKLPCED 223

[Close]

BLAST of HG10018776 vs. TAIR 10
Match: AT5G59550.1 (zinc finger (C3HC4-type RING finger) family protein )

HSP 1 Score: 61.6 bits (148), Expect = 9.1e-10
Identity = 32/82 (39.02%), Postives = 46/82 (56.10%), Query Frame = 0


Query: 139 PANNSAMESMLKRMEIEEIMKLSDDESINCVICMEEISREEEGKSGTFVLQMPCLHMFHE 198
           PA+ SA+ES L R+EI +    S+    NC +C E    E E +      +MPC H+FH+
Sbjct: 174 PASKSAIES-LPRVEISDCHIGSE---ANCAVCTEIFETETEAR------EMPCKHLFHD 233

Query: 199 ECIKKWSKSSHYCPTCRFSMPT 221
           +CI  W    + CP CRF +P+
Sbjct: 234 DCIVPWLSIRNSCPVCRFELPS 245

[Close]

BLAST of HG10018776 vs. TAIR 10
Match: AT3G46620.1 (zinc finger (C3HC4-type RING finger) family protein )

HSP 1 Score: 59.7 bits (143), Expect = 3.5e-09
Identity = 31/83 (37.35%), Postives = 46/83 (55.42%), Query Frame = 0


Query: 139 PANNSAMESMLKRMEIEEIMKLSDDESINCVICMEEISREEEGKSGTFVLQMPCLHMFHE 198
           PA+ SA+ES L R+EI +    ++    NC +C E      EG+      +MPC H+FH 
Sbjct: 190 PASKSAIES-LPRVEISDCHTKAE---ANCAVCTEVFEAGIEGR------EMPCKHIFHG 249

Query: 199 ECIKKWSKSSHYCPTCRFSMPTN 222
           +CI  W    + CP CRF +P++
Sbjct: 250 DCIVPWLSIRNSCPVCRFELPSD 262

[Close]

BLAST of HG10018776 vs. TAIR 10
Match: AT5G60820.1 (RING/U-box superfamily protein )

HSP 1 Score: 59.3 bits (142), Expect = 4.5e-09
Identity = 40/137 (29.20%), Postives = 73/137 (53.28%), Query Frame = 0


Query: 86  ANEIIKYWVRKVEEEEEDNFRVFGKVYPLEITIELLLFERVDNDTIEVPLMMVPANNSAM 145
           A   ++ ++  ++ EEED      + Y L  T   +LFE   +  I  P    PA+ S +
Sbjct: 300 AESNLELYIGDIDHEEEDY-----EDY-LHTTEYEMLFEAEISSGIGKP----PASKSFI 359

Query: 146 ESM-LKRMEIEEIMKLSDDESINCVICMEEISREEEGKSGTFVLQMPCLHMFHEECIKKW 205
           +++ +  +  E++M+ +DD+++ C +C EE+   +E      V ++PC H +H ECI  W
Sbjct: 360 KNLKVSPLSNEDVME-NDDDAVCCAVCKEEMIVGKE------VAELPCRHKYHSECIVPW 419

Query: 206 SKSSHYCPTCRFSMPTN 222
               + CP CRF +P++
Sbjct: 420 LGIRNTCPVCRFELPSD 419

The following BLAST results are available for this feature:

BLAST of HG10018776 vs. NCBI nr


Match Name	E-value	Identity	Description
ADN34252.1	1.7e-63	61.68	hypothetical zinc finger protein [Cucumis melo subsp. melo] >KAA0031412.1 putati...	[more]
KAE8645828.1	6.2e-61	55.76	hypothetical protein Csa_017274 [Cucumis sativus]	[more]
KGN43799.1	7.6e-59	53.10	hypothetical protein Csa_017222 [Cucumis sativus]	[more]
KAA0031411.1	2.9e-58	48.51	putative zinc finger protein [Cucumis melo var. makuwa]	[more]
TYK06862.1	4.9e-58	48.51	putative zinc finger protein [Cucumis melo var. makuwa]	[more]

BLAST of HG10018776 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LPN7	1.2e-09	34.52	E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19...	[more]
Q940T5	1.3e-08	39.02	E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana OX=3702 GN=DURF2 PE=1 ...	[more]
Q9SNB6	4.9e-08	37.35	E3 ubiquitin-protein ligase RDUF1 OS=Arabidopsis thaliana OX=3702 GN=RDUF1 PE=1 ...	[more]
P0CH30	8.3e-08	32.94	E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV...	[more]
Q9VE61	2.4e-07	33.70	E3 ubiquitin-protein ligase RNF181 homolog OS=Drosophila melanogaster OX=7227 GN...	[more]

BLAST of HG10018776 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C4K6	8.5e-64	61.68	Putative zinc finger protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
E5GCQ3	8.5e-64	61.68	Hypothetical zinc finger protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
A0A0A0K2A5	1.1e-63	60.19	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G068580 P...	[more]
A0A0A0K2A1	2.5e-60	55.30	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G067550 P...	[more]
A0A0A0K7L0	3.7e-59	56.31	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G067560 P...	[more]

BLAST of HG10018776 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G19950.1	8.2e-11	34.52	RING/U-box superfamily protein	[more]
AT1G18760.1	4.1e-10	34.52	Zinc finger, C3HC4 type (RING finger) family protein	[more]
AT5G59550.1	9.1e-10	39.02	zinc finger (C3HC4-type RING finger) family protein	[more]
AT3G46620.1	3.5e-09	37.35	zinc finger (C3HC4-type RING finger) family protein	[more]
AT5G60820.1	4.5e-09	29.20	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 168..214 e-value: 1.8E-8 score: 44.2
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 167..215 e-value: 1.3E-11 score: 44.7
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 168..215 score: 13.094151
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 132..221 e-value: 9.7E-18 score: 65.6
None	No IPR available	PANTHER	PTHR15710:SF63	RING/U-BOX SUPERFAMILY PROTEIN	coord: 84..220
None	No IPR available	PANTHER	PTHR15710	E3 UBIQUITIN-PROTEIN LIGASE PRAJA	coord: 84..220
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 150..220

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10018776.1	HG10018776.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0061630	ubiquitin protein ligase activity
molecular_function	GO:0008270	zinc ion binding