HG10018714 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGTTACTACGCCCAGCCACCGCCTCCCGTCGGCGTTCCTCCGCCACAAGGTAACATCTAAAAACCATTACTCTTTCCTCTCTTACTTCTCCTCCGTTGCACTTTCTTGAAATTCTAAGATCCAGATCGAATGGATCTTACTTTTTCTTTCCGCAAAATTGATCTACTCTTTGTTTTCATCTCGCTTTCGCGCTTTGATTTGTTGAATTTTGACGATTTTAGGTTATCCGCCGGCAGGATATCCTCCGAAGGACGCTTATCCGCCGGCAGGATATCCACCGCAGGGCGGTTATCCACCTGCTGGTTATCCTCCGCAGGGATATCCACCTCCGCCGGCGTATGGTCCGGCGTATGGTCACCCTCCGCCTCAACATCAAAACCAAAAGAAAGAAGTCGGATTCGTCGAAGGCTGGTAA ATGAGTTACTACGCCCAGCCACCGCCTCCCGTCGGCGTTCCTCCGCCACAAGGTTATCCGCCGGCAGGATATCCTCCGAAGGACGCTTATCCGCCGGCAGGATATCCACCGCAGGGCGGTTATCCACCTGCTGGTTATCCTCCGCAGGGATATCCACCTCCGCCGGCGTATGGTCCGGCGTATGGTCACCCTCCGCCTCAACATCAAAACCAAAAGAAAGAAGTCGGATTCGTCGAAGGCTGGTAA ATGAGTTACTACGCCCAGCCACCGCCTCCCGTCGGCGTTCCTCCGCCACAAGGTTATCCGCCGGCAGGATATCCTCCGAAGGACGCTTATCCGCCGGCAGGATATCCACCGCAGGGCGGTTATCCACCTGCTGGTTATCCTCCGCAGGGATATCCACCTCCGCCGGCGTATGGTCCGGCGTATGGTCACCCTCCGCCTCAACATCAAAACCAAAAGAAAGAAGTCGGATTCGTCGAAGGCTGGTAA MSYYAQPPPPVGVPPPQGYPPAGYPPKDAYPPAGYPPQGGYPPAGYPPQGYPPPPAYGPAYGHPPPQHQNQKKEVGFVEGW Homology
BLAST of HG10018714 vs. NCBI nr
Match: XP_011658867.1 (cysteine-rich and transmembrane domain-containing protein WIH2 [Cucumis sativus] >KGN43843.1 hypothetical protein Csa_017085 [Cucumis sativus]) HSP 1 Score: 151.8 bits (382), Expect = 2.6e-33 Identity = 76/80 (95.00%), Postives = 76/80 (95.00%), Query Frame = 0
BLAST of HG10018714 vs. NCBI nr
Match: XP_038888465.1 (cysteine-rich and transmembrane domain-containing protein WIH2-like [Benincasa hispida]) HSP 1 Score: 151.4 bits (381), Expect = 3.4e-33 Identity = 73/80 (91.25%), Postives = 75/80 (93.75%), Query Frame = 0
BLAST of HG10018714 vs. NCBI nr
Match: KAG7011598.1 (hypothetical protein SDJN02_26504, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 147.1 bits (370), Expect = 6.4e-32 Identity = 74/81 (91.36%), Postives = 74/81 (91.36%), Query Frame = 0
BLAST of HG10018714 vs. NCBI nr
Match: KAA0031373.1 (cysteine-rich and transmembrane domain-containing protein A-like [Cucumis melo var. makuwa] >TYK06825.1 cysteine-rich and transmembrane domain-containing protein A-like [Cucumis melo var. makuwa]) HSP 1 Score: 146.0 bits (367), Expect = 1.4e-31 Identity = 75/82 (91.46%), Postives = 76/82 (92.68%), Query Frame = 0
BLAST of HG10018714 vs. NCBI nr
Match: XP_023553865.1 (cysteine-rich and transmembrane domain-containing protein WIH2-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 142.9 bits (359), Expect = 1.2e-30 Identity = 73/80 (91.25%), Postives = 73/80 (91.25%), Query Frame = 0
BLAST of HG10018714 vs. ExPASy Swiss-Prot
Match: Q8S8M0 (Cysteine-rich and transmembrane domain-containing protein WIH2 OS=Arabidopsis thaliana OX=3702 GN=WIH2 PE=1 SV=1) HSP 1 Score: 93.6 bits (231), Expect = 1.1e-18 Identity = 59/87 (67.82%), Postives = 61/87 (70.11%), Query Frame = 0
BLAST of HG10018714 vs. ExPASy Swiss-Prot
Match: Q8LCL8 (Cysteine-rich and transmembrane domain-containing protein B OS=Arabidopsis thaliana OX=3702 GN=At3g57160 PE=3 SV=2) HSP 1 Score: 65.1 bits (157), Expect = 4.2e-10 Identity = 47/86 (54.65%), Postives = 50/86 (58.14%), Query Frame = 0
BLAST of HG10018714 vs. ExPASy Swiss-Prot
Match: P09241 (Rhodopsin OS=Enteroctopus dofleini OX=267067 GN=RHO PE=2 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 8.0e-09 Identity = 44/70 (62.86%), Postives = 45/70 (64.29%), Query Frame = 0
BLAST of HG10018714 vs. ExPASy Swiss-Prot
Match: Q9FJW3 (Cysteine-rich and transmembrane domain-containing protein WIH1 OS=Arabidopsis thaliana OX=3702 GN=WIH1 PE=2 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 1.0e-08 Identity = 44/80 (55.00%), Postives = 48/80 (60.00%), Query Frame = 0
BLAST of HG10018714 vs. ExPASy Swiss-Prot
Match: P24639 (Annexin A7 OS=Dictyostelium discoideum OX=44689 GN=nxnA PE=1 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 6.7e-08 Identity = 41/64 (64.06%), Postives = 43/64 (67.19%), Query Frame = 0
BLAST of HG10018714 vs. ExPASy TrEMBL
Match: A0A0A0K2W8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G070830 PE=4 SV=1) HSP 1 Score: 151.8 bits (382), Expect = 1.3e-33 Identity = 76/80 (95.00%), Postives = 76/80 (95.00%), Query Frame = 0
BLAST of HG10018714 vs. ExPASy TrEMBL
Match: A0A5A7SME1 (Cysteine-rich and transmembrane domain-containing protein A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G001290 PE=4 SV=1) HSP 1 Score: 146.0 bits (367), Expect = 6.9e-32 Identity = 75/82 (91.46%), Postives = 76/82 (92.68%), Query Frame = 0
BLAST of HG10018714 vs. ExPASy TrEMBL
Match: A0A6J1GJV9 (cysteine-rich and transmembrane domain-containing protein WIH2-like OS=Cucurbita moschata OX=3662 GN=LOC111454944 PE=4 SV=1) HSP 1 Score: 142.9 bits (359), Expect = 5.9e-31 Identity = 73/80 (91.25%), Postives = 73/80 (91.25%), Query Frame = 0
BLAST of HG10018714 vs. ExPASy TrEMBL
Match: A0A1S3BZZ2 (cysteine-rich and transmembrane domain-containing protein A-like OS=Cucumis melo OX=3656 GN=LOC103495315 PE=4 SV=1) HSP 1 Score: 141.7 bits (356), Expect = 1.3e-30 Identity = 74/81 (91.36%), Postives = 75/81 (92.59%), Query Frame = 0
BLAST of HG10018714 vs. ExPASy TrEMBL
Match: A0A6J1I9Y5 (cysteine-rich and transmembrane domain-containing protein WIH2-like OS=Cucurbita maxima OX=3661 GN=LOC111470998 PE=4 SV=1) HSP 1 Score: 132.9 bits (333), Expect = 6.1e-28 Identity = 69/80 (86.25%), Postives = 69/80 (86.25%), Query Frame = 0
BLAST of HG10018714 vs. TAIR 10
Match: AT2G41420.1 (proline-rich family protein ) HSP 1 Score: 93.6 bits (231), Expect = 7.9e-20 Identity = 59/87 (67.82%), Postives = 61/87 (70.11%), Query Frame = 0
BLAST of HG10018714 vs. TAIR 10
Match: AT3G49845.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 66.2 bits (160), Expect = 1.3e-11 Identity = 49/98 (50.00%), Postives = 55/98 (56.12%), Query Frame = 0
BLAST of HG10018714 vs. TAIR 10
Match: AT5G67600.1 (unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G49845.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 60.5 bits (145), Expect = 7.4e-10 Identity = 44/80 (55.00%), Postives = 48/80 (60.00%), Query Frame = 0
BLAST of HG10018714 vs. TAIR 10
Match: AT5G17650.1 (glycine/proline-rich protein ) HSP 1 Score: 59.3 bits (142), Expect = 1.6e-09 Identity = 38/67 (56.72%), Postives = 41/67 (61.19%), Query Frame = 0
BLAST of HG10018714 vs. TAIR 10
Match: AT5G45350.1 (proline-rich family protein ) HSP 1 Score: 55.5 bits (132), Expect = 2.4e-08 Identity = 44/73 (60.27%), Postives = 45/73 (61.64%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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