HG10018640 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10018640
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionC2 domain-containing protein
LocationChr04: 6149561 .. 6152268 (+)
RNA-Seq ExpressionHG10018640
SyntenyHG10018640
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGAAGAGAGATAGATGCAAAGTTGAAAAGTTCCTTGAATGGCAGACGCGGCATCGGCAATATAATTGCGAGAGAGAATTCTGGCGGGCTCAATTTCTTCCCTCTTACCTCCAACGATTTCTCTGGTTCTTTCCATATCTCTCTGTTTCCTTCCTCGAAGAACCCAGCACGCGCCTCAAAACGCCGTCTTCTGTTCCTTATATACAAAGTAAATCCCTCTCTTTATCTTTAATCCTCTTTATCTTTCTCTTCCCTGCCCCTTTTTGTTTTCCTTTTCCGGAATTCGATTTGTTTGTTGTTTTTTATTTCGTGGGTTACAATACTCTTTTGAATATTCTATCACGCTTCTGTGAATTTGATTCAGTTTTTGTTTTGTGGGTTGTGTTCGAAGTCTCCTGTGAATATTCTATTCTGGGTCTCTTCAGAAAAAGGGTAAAAGGTTTGAACAAATTAGGGCAAAGTCGACTTTAGAATTGTACCCAGCTGCATTTGATTCTTCTATGTCGACATATACCATTCAGGGTCAACCTCTTGAAGTCACCGGTATGTTTGTTTAGTTCTGTTTTCAAATTGGGGTTGATTATTAATTAATCTTTCCTTTCCATAAAGGAAAAAGAAGTTGATTTCGTTTCTGGGTTTTGTTTCTTTTGTTGTTTTGGGTTAGTTATTGGATGCACAAAGTTGAAAGATACGGAATGGATTTCAAGGCAGGATCCTTATGTGTGCCTTGAATATGGTAGTACAAAGTTTCGCACAACCACTTGCACAGGTTTGATTTTGGATGTTCCTTGTTCTGTTTTGGTTCTTGGTGTAATTTGTTTAGATCTGAGAAGACAATCTTAAACTGAATGTGAAATTGATTGGCAATGTATAGATGGTGGTAGAAATCCCACATTCCAAGAGAAATTTGTGTTTTCTCTGATTGAAGGGCTAAGAGAGATTAATATCACAGTTTGGAACAGCAATACAGTTACTTATGATGACTTCATTGGCAATGGAAAGTAAGATTTATGTTCTGTCTTCCTTTTTGGTTTTTGATGTGTGGATGGTCAATCTTACCATCTGTTTAGCTAACCTATTGTTAAGATTTTTCATCTGGGGTATTGAGTTTTGAATTTTCTGTTTTATAGAATCCAATTGGCTAAAGTTCTAGCAGAAGGGTATGATGACAGCTCATGGTCACTTCAAACTAAAACTGGCAGGTATTATGAGATGACTGAGAATTTGATAAAATTTTCCCCTTTAAAACCATGTTAGAAGGTTTGACTTGCAAGCAAATTTTGGCTCACCGTTCTGTTTATTGCATGTTGCTGTTTATAAAATAATTTTTGCTTAATGTTTTGTTTTCTTTTACCTTGTTTGTTTTAAAGGGCTTGTTTTTAGAATAATTGAACTGTATCATCCTATGAAGAACATGAAGCATGTACAATGTACAATACATTGAACATTACAAATCACTAGACCATAGTTTGGAAGAAAATTTTTGGAATATAAGCAGACAATTGTTTTGAAAACAATCTATCTACGACCCTTTGATTTCTTGCTCATAAAGTGTATTCAGGCAATTAAGTCTATCGTTGTTATGATCATGAATTCAGTTGATTATGGGTATTGTAGTTGTTCTCCACCTTATTTTTCGATATAGTTTCTTGATAAGAAAAGCCGTATGTCCTGATAGCGATGCTTTGCAAACATTTCTGTGGGCATTGCGTGTCATGGATCTTCTATGCTTTAACGTTAGGATGTTCGTATTGTAGAAGTATCGAGTTTGGTATAGCCATCTCCCCTTTCCCATTACCCTCCCTATCCTATGGTGAAATTGCTCCCATGTAAGCATATAGTTTCCAATTTTTGGGAGAATGTTTGATTCAATAACCTTCATTTGACAAGAAACCCCTAGAGGGTTTGATTTCTTTTCATTTTTTGTTAGTTTTGAATGATAACAAGTCTTCTGCTTGAGGTTCACTTTGTTATCTGTGATTTGTCTGAATCATCTGGGAAGTTCGATATTTTGTTTTAGTTATCATTATGACGTGATATTTCAACAAGCATCACCTACTAACGTCATTTCCCATTAGTCCAAAATCTAAAATTGTAACCGTCGCTTTCATCTTGTTGTAGACATGCTGGGGAAGTACGACTGATATTACATTTTGCAAGTGCCAATGTAAGTGGAATTTGTATTGAAGCTTTAGTTACTGGTCAGAAAAAGTTCAGTACTGTTTCTATTTGTATAACATTCATGGGCAAAGGGATGACCTATTTGTTTTGATTACAGAGACCGTCGTCAAGTTTTACGCCCTCGGCACCACCATTTCATGCACCTACTCCACCCCAAGTCCCTGCGTACGCTACAATGCCACAGGCACACCCGACGGCCTACCCTCCTCCTAGTGCTACACCCTATGCATCATTTCAATCTCCCTATCCTTCTTACCCACCCAGCTCTGGAGCATATCAAACATCCATGTACTCCCCATATCCATCTGGGTATCCTCCCACGTCATACCCGGCGCCTCCCTCGGCTTATCCTCCCGGTCCTTACCCACCACCTCCACAAGCCTCACCCTTTTATCCTCCAGGTAAATTTACGTCAATTTCGATGTTTTGAAAGCTTTATTATATGAAATCACAATGCAACTAAAACTTAGGTTCTGCTGTTGCTCAGGTCCTTATCCTGGAGTTTATCCCCCACCACAGTATTGA

mRNA sequence

ATGAGAAGAGAGATAGATGCAAAGTTGAAAAGTTCCTTGAATGGCAGACGCGGCATCGGCAATATAATTGCGAGAGAGAATTCTGGCGGGCTCAATTTCTTCCCTCTTACCTCCAACGATTTCTCTGGTTCTTTCCATATCTCTCTGTTTCCTTCCTCGAAGAACCCAGCACGCGCCTCAAAACGCCGTCTTCTGTTCCTTATATACAAAAAAAAGGGTAAAAGGTTTGAACAAATTAGGGCAAAGTCGACTTTAGAATTGTACCCAGCTGCATTTGATTCTTCTATGTCGACATATACCATTCAGGGTCAACCTCTTGAAGTCACCGTTATTGGATGCACAAAGTTGAAAGATACGGAATGGATTTCAAGGCAGGATCCTTATGTGTGCCTTGAATATGGTAGTACAAAGTTTCGCACAACCACTTGCACAGATGGTGGTAGAAATCCCACATTCCAAGAGAAATTTGTGTTTTCTCTGATTGAAGGGCTAAGAGAGATTAATATCACAGTTTGGAACAGCAATACAGTTACTTATGATGACTTCATTGGCAATGGAAAAATCCAATTGGCTAAAGTTCTAGCAGAAGGGTATGATGACAGCTCATGGTCACTTCAAACTAAAACTGGCAGAAGTATCGAGTTTGGTATAGCCATCTCCCCTTTCCCATTACCCTCCCTATCCTATGGTGAAATTGCTCCCATACATGCTGGGGAAGTACGACTGATATTACATTTTGCAAGTGCCAATAGACCGTCGTCAAGTTTTACGCCCTCGGCACCACCATTTCATGCACCTACTCCACCCCAAGTCCCTGCGTACGCTACAATGCCACAGGCACACCCGACGGCCTACCCTCCTCCTAGTGCTACACCCTATGCATCATTTCAATCTCCCTATCCTTCTTACCCACCCAGCTCTGGAGCATATCAAACATCCATGTACTCCCCATATCCATCTGGGTATCCTCCCACGTCATACCCGGCGCCTCCCTCGGCTTATCCTCCCGGTCCTTACCCACCACCTCCACAAGCCTCACCCTTTTATCCTCCAGGTCCTTATCCTGGAGTTTATCCCCCACCACAGTATTGA

Coding sequence (CDS)

ATGAGAAGAGAGATAGATGCAAAGTTGAAAAGTTCCTTGAATGGCAGACGCGGCATCGGCAATATAATTGCGAGAGAGAATTCTGGCGGGCTCAATTTCTTCCCTCTTACCTCCAACGATTTCTCTGGTTCTTTCCATATCTCTCTGTTTCCTTCCTCGAAGAACCCAGCACGCGCCTCAAAACGCCGTCTTCTGTTCCTTATATACAAAAAAAAGGGTAAAAGGTTTGAACAAATTAGGGCAAAGTCGACTTTAGAATTGTACCCAGCTGCATTTGATTCTTCTATGTCGACATATACCATTCAGGGTCAACCTCTTGAAGTCACCGTTATTGGATGCACAAAGTTGAAAGATACGGAATGGATTTCAAGGCAGGATCCTTATGTGTGCCTTGAATATGGTAGTACAAAGTTTCGCACAACCACTTGCACAGATGGTGGTAGAAATCCCACATTCCAAGAGAAATTTGTGTTTTCTCTGATTGAAGGGCTAAGAGAGATTAATATCACAGTTTGGAACAGCAATACAGTTACTTATGATGACTTCATTGGCAATGGAAAAATCCAATTGGCTAAAGTTCTAGCAGAAGGGTATGATGACAGCTCATGGTCACTTCAAACTAAAACTGGCAGAAGTATCGAGTTTGGTATAGCCATCTCCCCTTTCCCATTACCCTCCCTATCCTATGGTGAAATTGCTCCCATACATGCTGGGGAAGTACGACTGATATTACATTTTGCAAGTGCCAATAGACCGTCGTCAAGTTTTACGCCCTCGGCACCACCATTTCATGCACCTACTCCACCCCAAGTCCCTGCGTACGCTACAATGCCACAGGCACACCCGACGGCCTACCCTCCTCCTAGTGCTACACCCTATGCATCATTTCAATCTCCCTATCCTTCTTACCCACCCAGCTCTGGAGCATATCAAACATCCATGTACTCCCCATATCCATCTGGGTATCCTCCCACGTCATACCCGGCGCCTCCCTCGGCTTATCCTCCCGGTCCTTACCCACCACCTCCACAAGCCTCACCCTTTTATCCTCCAGGTCCTTATCCTGGAGTTTATCCCCCACCACAGTATTGA

Protein sequence

MRREIDAKLKSSLNGRRGIGNIIARENSGGLNFFPLTSNDFSGSFHISLFPSSKNPARASKRRLLFLIYKKKGKRFEQIRAKSTLELYPAAFDSSMSTYTIQGQPLEVTVIGCTKLKDTEWISRQDPYVCLEYGSTKFRTTTCTDGGRNPTFQEKFVFSLIEGLREINITVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSSWSLQTKTGRSIEFGIAISPFPLPSLSYGEIAPIHAGEVRLILHFASANRPSSSFTPSAPPFHAPTPPQVPAYATMPQAHPTAYPPPSATPYASFQSPYPSYPPSSGAYQTSMYSPYPSGYPPTSYPAPPSAYPPGPYPPPPQASPFYPPGPYPGVYPPPQY
Homology
BLAST of HG10018640 vs. NCBI nr
Match: XP_038888782.1 (protein SRC2 homolog [Benincasa hispida] >XP_038888783.1 protein SRC2 homolog [Benincasa hispida] >XP_038888784.1 protein SRC2 homolog [Benincasa hispida])

HSP 1 Score: 451.8 bits (1161), Expect = 5.5e-123
Identity = 234/269 (86.99%), Postives = 238/269 (88.48%), Query Frame = 0

Query: 96  MSTYTIQGQPLEVTVIGCTKLKDTEWISRQDPYVCLEYGSTKFRTTTCTDGGRNPTFQEK 155
           MSTYTIQGQPLEVTVIGCTKLKDTEWISRQDPYVCLEYGSTKFRTTTCTDGGRNPTFQEK
Sbjct: 1   MSTYTIQGQPLEVTVIGCTKLKDTEWISRQDPYVCLEYGSTKFRTTTCTDGGRNPTFQEK 60

Query: 156 FVFSLIEGLREINITVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSSWSLQTKTGRSIEF 215
           FVFSLIEGLREIN+TVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSSWSLQTKTGR    
Sbjct: 61  FVFSLIEGLREINVTVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSSWSLQTKTGR---- 120

Query: 216 GIAISPFPLPSLSYGEIAPIHAGEVRLILHFASANRPSSSFTPSAPPFHAPTPPQVPAYA 275
                               HAGEVRLILHFA+ANRPSS+F PSAPPFHAPTPPQV AYA
Sbjct: 121 --------------------HAGEVRLILHFANANRPSSTFAPSAPPFHAPTPPQVSAYA 180

Query: 276 TMPQAHPTAYPPPSATPYASFQSPYPSYPPSSGAYQTSMY-SPYPSGYPPTSYPAPPSAY 335
           TMP  HPTAYPPPSATPYASFQSPYPSYPPSSGAYQTSMY SPYPSGYPPTSYP PPSAY
Sbjct: 181 TMPLPHPTAYPPPSATPYASFQSPYPSYPPSSGAYQTSMYSSPYPSGYPPTSYPPPPSAY 240

Query: 336 PPGPYPPPPQASPFYPPGPYPGVYPPPQY 364
           PPGPYPPPPQ SPFYPPGPYPG+YPPPQY
Sbjct: 241 PPGPYPPPPQVSPFYPPGPYPGIYPPPQY 245

BLAST of HG10018640 vs. NCBI nr
Match: XP_008454977.1 (PREDICTED: leucine-rich repeat extensin-like protein 3 [Cucumis melo] >XP_008454978.1 PREDICTED: leucine-rich repeat extensin-like protein 3 [Cucumis melo] >XP_016901753.1 PREDICTED: leucine-rich repeat extensin-like protein 3 [Cucumis melo] >KAA0031324.1 leucine-rich repeat extensin-like protein 3 [Cucumis melo var. makuwa] >TYK06775.1 leucine-rich repeat extensin-like protein 3 [Cucumis melo var. makuwa])

HSP 1 Score: 442.2 bits (1136), Expect = 4.3e-120
Identity = 232/271 (85.61%), Postives = 237/271 (87.45%), Query Frame = 0

Query: 96  MSTYTIQGQPLEVTVIGCTKLKDTEWISRQDPYVCLEYGSTKFRTTTCTDGGRNPTFQEK 155
           MSTY+IQGQPLEVTVIGCTKLKDTEWISRQDPYVCLEYGSTKFRTTTCTDGGRNPTFQEK
Sbjct: 1   MSTYSIQGQPLEVTVIGCTKLKDTEWISRQDPYVCLEYGSTKFRTTTCTDGGRNPTFQEK 60

Query: 156 FVFSLIEGLREINITVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSSWSLQTKTGRSIEF 215
           FVFSLIEGLREI +TVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSSWSLQTKTGR    
Sbjct: 61  FVFSLIEGLREIIVTVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSSWSLQTKTGR---- 120

Query: 216 GIAISPFPLPSLSYGEIAPIHAGEVRLILHFASANRPSSSFTPSAPPFHAPTPPQVPAYA 275
                               HAGEVRLILHFA+ANRP+SSF PSAPPFHAPTPPQVPAYA
Sbjct: 121 --------------------HAGEVRLILHFANANRPTSSFAPSAPPFHAPTPPQVPAYA 180

Query: 276 TM--PQAHPTAYPPPSATPYASFQSPYPSYPPSSGAYQTSMY-SPYPSGYPPTSYPAPPS 335
           TM  P AHPTAYPPP+ATPYASFQSPYPSYPPSSG YQTSMY SPYP GYPPTSYP PPS
Sbjct: 181 TMPPPPAHPTAYPPPNATPYASFQSPYPSYPPSSGTYQTSMYSSPYPPGYPPTSYPPPPS 240

Query: 336 AYPPGPYPPPPQASPFYPPGPYPGVYPPPQY 364
           AYPP PYPPPPQASPFYPPGPYPGVYPPPQY
Sbjct: 241 AYPPNPYPPPPQASPFYPPGPYPGVYPPPQY 247

BLAST of HG10018640 vs. NCBI nr
Match: XP_011658892.1 (leucine-rich repeat extensin-like protein 3 [Cucumis sativus] >XP_031744405.1 leucine-rich repeat extensin-like protein 3 [Cucumis sativus] >KGN43902.1 hypothetical protein Csa_017078 [Cucumis sativus])

HSP 1 Score: 435.6 bits (1119), Expect = 4.1e-118
Identity = 229/272 (84.19%), Postives = 234/272 (86.03%), Query Frame = 0

Query: 96  MSTYTIQGQPLEVTVIGCTKLKDTEWISRQDPYVCLEYGSTKFRTTTCTDGGRNPTFQEK 155
           MST+ IQGQPLEVTVIGCTKLKDTEWISRQDPYV LEYGSTKFRTTTCTDGGRNPTFQEK
Sbjct: 1   MSTFAIQGQPLEVTVIGCTKLKDTEWISRQDPYVFLEYGSTKFRTTTCTDGGRNPTFQEK 60

Query: 156 FVFSLIEGLREINITVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSSWSLQTKTGRSIEF 215
           FVFSLIEGLREIN+TVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSSWSLQTKTGR    
Sbjct: 61  FVFSLIEGLREINVTVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSSWSLQTKTGR---- 120

Query: 216 GIAISPFPLPSLSYGEIAPIHAGEVRLILHFASANRPSSSFTPSAPPFHAPTPPQVPAYA 275
                               HAGEVRLILHFA+ANRP+SSF PSAPPFH PTPPQVPAY 
Sbjct: 121 --------------------HAGEVRLILHFANANRPTSSFAPSAPPFHVPTPPQVPAYI 180

Query: 276 TMP---QAHPTAYPPPSATPYASFQSPYPSYPPSSGAYQTSMY-SPYPSGYPPTSYPAPP 335
           TMP    AHPTAYPPP+ TPYASFQSPYPSYPPSSG YQTSMY SPYPSGYPPTSYP PP
Sbjct: 181 TMPPPSPAHPTAYPPPTPTPYASFQSPYPSYPPSSGTYQTSMYSSPYPSGYPPTSYPPPP 240

Query: 336 SAYPPGPYPPPPQASPFYPPGPYPGVYPPPQY 364
           SAYPP PYPPPPQASPFYPPGPYPGVYPPPQY
Sbjct: 241 SAYPPNPYPPPPQASPFYPPGPYPGVYPPPQY 248

BLAST of HG10018640 vs. NCBI nr
Match: XP_022147782.1 (protein SRC2 homolog [Momordica charantia] >XP_022147784.1 protein SRC2 homolog [Momordica charantia])

HSP 1 Score: 411.8 bits (1057), Expect = 6.3e-111
Identity = 216/270 (80.00%), Postives = 227/270 (84.07%), Query Frame = 0

Query: 96  MSTYTIQGQPLEVTVIGCTKLKDTEWISRQDPYVCLEYGSTKFRTTTCTDGGRNPTFQEK 155
           MSTY IQGQPLEVTVIGCTKLKDTEWISRQDPYV LEYGSTKFRTTTCTDGGRNPTFQEK
Sbjct: 1   MSTYAIQGQPLEVTVIGCTKLKDTEWISRQDPYVLLEYGSTKFRTTTCTDGGRNPTFQEK 60

Query: 156 FVFSLIEGLREINITVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSSWSLQTKTGRSIEF 215
           FVFSLIEGLREIN+ VWNSNTVTYDDFIGNGKIQLAKVL+EGYDDS+WSLQTKTGR    
Sbjct: 61  FVFSLIEGLREINVAVWNSNTVTYDDFIGNGKIQLAKVLSEGYDDSAWSLQTKTGR---- 120

Query: 216 GIAISPFPLPSLSYGEIAPIHAGEVRLILHFASANRPSSSFTPSAPPFHAPTPPQVPAYA 275
                               HAGEVRLILHFA+A +PSSSFTPSAPPF AP PP VP YA
Sbjct: 121 --------------------HAGEVRLILHFATATKPSSSFTPSAPPFQAPAPPHVPVYA 180

Query: 276 TM--PQAHPTAYPPPSATPYASFQSPYPSYPPSSGAYQTSMYSPYPSGYPPTSYPAPPSA 335
           TM  P +H TAYPPP++TPY+   SP+PSYPPSS AYQTSMYSPYPSGYPP+SYP PP A
Sbjct: 181 TMPPPPSHTTAYPPPTSTPYSFPPSPFPSYPPSSVAYQTSMYSPYPSGYPPSSYPPPPLA 240

Query: 336 YPPGPYPPPPQASPFYPPGPYPGVYPPPQY 364
           YPP PYPPPPQASPFYPPGPYPGVYPPPQY
Sbjct: 241 YPPTPYPPPPQASPFYPPGPYPGVYPPPQY 246

BLAST of HG10018640 vs. NCBI nr
Match: XP_023553843.1 (C2 domain-containing protein At1g63220-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 409.1 bits (1050), Expect = 4.1e-110
Identity = 215/269 (79.93%), Postives = 223/269 (82.90%), Query Frame = 0

Query: 96  MSTYTIQGQPLEVTVIGCTKLKDTEWISRQDPYVCLEYGSTKFRTTTCTDGGRNPTFQEK 155
           MSTY+IQGQPLE TV+GCTKLKDTEWISRQDPYVCLEYGSTKFRTTTCTDGGRNPTFQ+K
Sbjct: 1   MSTYSIQGQPLEATVVGCTKLKDTEWISRQDPYVCLEYGSTKFRTTTCTDGGRNPTFQQK 60

Query: 156 FVFSLIEGLREINITVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSSWSLQTKTGRSIEF 215
           FVFSLIEGLREIN+TVWNSNTVTYDDFIG GKIQLAKVL+EGYDDSSWSLQTKTGR    
Sbjct: 61  FVFSLIEGLREINVTVWNSNTVTYDDFIGTGKIQLAKVLSEGYDDSSWSLQTKTGR---- 120

Query: 216 GIAISPFPLPSLSYGEIAPIHAGEVRLILHFASANRPSSSFTPSAPPFHAPTPPQVPAYA 275
                               HAGEVRLILHFA+A RPSSSF PSAPPF AP PPQVP YA
Sbjct: 121 --------------------HAGEVRLILHFANAKRPSSSFAPSAPPFQAPAPPQVPVYA 180

Query: 276 TMPQAHPTAYPPPSATPYASFQSPYPSYPPSSGAYQTSMY-SPYPSGYPPTSYPAPPSAY 335
           TMP  HPTAY  P+ TPYAS+QSPYPSYPPSS AYQTSMY SPYPSGYPP SYP PPSAY
Sbjct: 181 TMPPTHPTAYAHPTPTPYASYQSPYPSYPPSSVAYQTSMYSSPYPSGYPPASYPPPPSAY 240

Query: 336 PPGPYPPPPQASPFYPPGPYPGVYPPPQY 364
           PP PYPP PQASP YPP PY GVYPPP Y
Sbjct: 241 PPNPYPPHPQASPVYPPSPYHGVYPPPPY 245

BLAST of HG10018640 vs. ExPASy TrEMBL
Match: A0A1S4E0J9 (leucine-rich repeat extensin-like protein 3 OS=Cucumis melo OX=3656 GN=LOC103495260 PE=4 SV=1)

HSP 1 Score: 442.2 bits (1136), Expect = 2.1e-120
Identity = 232/271 (85.61%), Postives = 237/271 (87.45%), Query Frame = 0

Query: 96  MSTYTIQGQPLEVTVIGCTKLKDTEWISRQDPYVCLEYGSTKFRTTTCTDGGRNPTFQEK 155
           MSTY+IQGQPLEVTVIGCTKLKDTEWISRQDPYVCLEYGSTKFRTTTCTDGGRNPTFQEK
Sbjct: 1   MSTYSIQGQPLEVTVIGCTKLKDTEWISRQDPYVCLEYGSTKFRTTTCTDGGRNPTFQEK 60

Query: 156 FVFSLIEGLREINITVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSSWSLQTKTGRSIEF 215
           FVFSLIEGLREI +TVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSSWSLQTKTGR    
Sbjct: 61  FVFSLIEGLREIIVTVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSSWSLQTKTGR---- 120

Query: 216 GIAISPFPLPSLSYGEIAPIHAGEVRLILHFASANRPSSSFTPSAPPFHAPTPPQVPAYA 275
                               HAGEVRLILHFA+ANRP+SSF PSAPPFHAPTPPQVPAYA
Sbjct: 121 --------------------HAGEVRLILHFANANRPTSSFAPSAPPFHAPTPPQVPAYA 180

Query: 276 TM--PQAHPTAYPPPSATPYASFQSPYPSYPPSSGAYQTSMY-SPYPSGYPPTSYPAPPS 335
           TM  P AHPTAYPPP+ATPYASFQSPYPSYPPSSG YQTSMY SPYP GYPPTSYP PPS
Sbjct: 181 TMPPPPAHPTAYPPPNATPYASFQSPYPSYPPSSGTYQTSMYSSPYPPGYPPTSYPPPPS 240

Query: 336 AYPPGPYPPPPQASPFYPPGPYPGVYPPPQY 364
           AYPP PYPPPPQASPFYPPGPYPGVYPPPQY
Sbjct: 241 AYPPNPYPPPPQASPFYPPGPYPGVYPPPQY 247

BLAST of HG10018640 vs. ExPASy TrEMBL
Match: A0A5D3C5U4 (Leucine-rich repeat extensin-like protein 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G00770 PE=4 SV=1)

HSP 1 Score: 442.2 bits (1136), Expect = 2.1e-120
Identity = 232/271 (85.61%), Postives = 237/271 (87.45%), Query Frame = 0

Query: 96  MSTYTIQGQPLEVTVIGCTKLKDTEWISRQDPYVCLEYGSTKFRTTTCTDGGRNPTFQEK 155
           MSTY+IQGQPLEVTVIGCTKLKDTEWISRQDPYVCLEYGSTKFRTTTCTDGGRNPTFQEK
Sbjct: 1   MSTYSIQGQPLEVTVIGCTKLKDTEWISRQDPYVCLEYGSTKFRTTTCTDGGRNPTFQEK 60

Query: 156 FVFSLIEGLREINITVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSSWSLQTKTGRSIEF 215
           FVFSLIEGLREI +TVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSSWSLQTKTGR    
Sbjct: 61  FVFSLIEGLREIIVTVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSSWSLQTKTGR---- 120

Query: 216 GIAISPFPLPSLSYGEIAPIHAGEVRLILHFASANRPSSSFTPSAPPFHAPTPPQVPAYA 275
                               HAGEVRLILHFA+ANRP+SSF PSAPPFHAPTPPQVPAYA
Sbjct: 121 --------------------HAGEVRLILHFANANRPTSSFAPSAPPFHAPTPPQVPAYA 180

Query: 276 TM--PQAHPTAYPPPSATPYASFQSPYPSYPPSSGAYQTSMY-SPYPSGYPPTSYPAPPS 335
           TM  P AHPTAYPPP+ATPYASFQSPYPSYPPSSG YQTSMY SPYP GYPPTSYP PPS
Sbjct: 181 TMPPPPAHPTAYPPPNATPYASFQSPYPSYPPSSGTYQTSMYSSPYPPGYPPTSYPPPPS 240

Query: 336 AYPPGPYPPPPQASPFYPPGPYPGVYPPPQY 364
           AYPP PYPPPPQASPFYPPGPYPGVYPPPQY
Sbjct: 241 AYPPNPYPPPPQASPFYPPGPYPGVYPPPQY 247

BLAST of HG10018640 vs. ExPASy TrEMBL
Match: A0A0A0K6H5 (C2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G073380 PE=4 SV=1)

HSP 1 Score: 435.6 bits (1119), Expect = 2.0e-118
Identity = 229/272 (84.19%), Postives = 234/272 (86.03%), Query Frame = 0

Query: 96  MSTYTIQGQPLEVTVIGCTKLKDTEWISRQDPYVCLEYGSTKFRTTTCTDGGRNPTFQEK 155
           MST+ IQGQPLEVTVIGCTKLKDTEWISRQDPYV LEYGSTKFRTTTCTDGGRNPTFQEK
Sbjct: 1   MSTFAIQGQPLEVTVIGCTKLKDTEWISRQDPYVFLEYGSTKFRTTTCTDGGRNPTFQEK 60

Query: 156 FVFSLIEGLREINITVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSSWSLQTKTGRSIEF 215
           FVFSLIEGLREIN+TVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSSWSLQTKTGR    
Sbjct: 61  FVFSLIEGLREINVTVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSSWSLQTKTGR---- 120

Query: 216 GIAISPFPLPSLSYGEIAPIHAGEVRLILHFASANRPSSSFTPSAPPFHAPTPPQVPAYA 275
                               HAGEVRLILHFA+ANRP+SSF PSAPPFH PTPPQVPAY 
Sbjct: 121 --------------------HAGEVRLILHFANANRPTSSFAPSAPPFHVPTPPQVPAYI 180

Query: 276 TMP---QAHPTAYPPPSATPYASFQSPYPSYPPSSGAYQTSMY-SPYPSGYPPTSYPAPP 335
           TMP    AHPTAYPPP+ TPYASFQSPYPSYPPSSG YQTSMY SPYPSGYPPTSYP PP
Sbjct: 181 TMPPPSPAHPTAYPPPTPTPYASFQSPYPSYPPSSGTYQTSMYSSPYPSGYPPTSYPPPP 240

Query: 336 SAYPPGPYPPPPQASPFYPPGPYPGVYPPPQY 364
           SAYPP PYPPPPQASPFYPPGPYPGVYPPPQY
Sbjct: 241 SAYPPNPYPPPPQASPFYPPGPYPGVYPPPQY 248

BLAST of HG10018640 vs. ExPASy TrEMBL
Match: A0A6J1D3B5 (protein SRC2 homolog OS=Momordica charantia OX=3673 GN=LOC111016635 PE=4 SV=1)

HSP 1 Score: 411.8 bits (1057), Expect = 3.0e-111
Identity = 216/270 (80.00%), Postives = 227/270 (84.07%), Query Frame = 0

Query: 96  MSTYTIQGQPLEVTVIGCTKLKDTEWISRQDPYVCLEYGSTKFRTTTCTDGGRNPTFQEK 155
           MSTY IQGQPLEVTVIGCTKLKDTEWISRQDPYV LEYGSTKFRTTTCTDGGRNPTFQEK
Sbjct: 1   MSTYAIQGQPLEVTVIGCTKLKDTEWISRQDPYVLLEYGSTKFRTTTCTDGGRNPTFQEK 60

Query: 156 FVFSLIEGLREINITVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSSWSLQTKTGRSIEF 215
           FVFSLIEGLREIN+ VWNSNTVTYDDFIGNGKIQLAKVL+EGYDDS+WSLQTKTGR    
Sbjct: 61  FVFSLIEGLREINVAVWNSNTVTYDDFIGNGKIQLAKVLSEGYDDSAWSLQTKTGR---- 120

Query: 216 GIAISPFPLPSLSYGEIAPIHAGEVRLILHFASANRPSSSFTPSAPPFHAPTPPQVPAYA 275
                               HAGEVRLILHFA+A +PSSSFTPSAPPF AP PP VP YA
Sbjct: 121 --------------------HAGEVRLILHFATATKPSSSFTPSAPPFQAPAPPHVPVYA 180

Query: 276 TM--PQAHPTAYPPPSATPYASFQSPYPSYPPSSGAYQTSMYSPYPSGYPPTSYPAPPSA 335
           TM  P +H TAYPPP++TPY+   SP+PSYPPSS AYQTSMYSPYPSGYPP+SYP PP A
Sbjct: 181 TMPPPPSHTTAYPPPTSTPYSFPPSPFPSYPPSSVAYQTSMYSPYPSGYPPSSYPPPPLA 240

Query: 336 YPPGPYPPPPQASPFYPPGPYPGVYPPPQY 364
           YPP PYPPPPQASPFYPPGPYPGVYPPPQY
Sbjct: 241 YPPTPYPPPPQASPFYPPGPYPGVYPPPQY 246

BLAST of HG10018640 vs. ExPASy TrEMBL
Match: A0A6J1I8G9 (C2 domain-containing protein At1g63220-like OS=Cucurbita maxima OX=3661 GN=LOC111470959 PE=4 SV=1)

HSP 1 Score: 406.8 bits (1044), Expect = 9.8e-110
Identity = 214/269 (79.55%), Postives = 222/269 (82.53%), Query Frame = 0

Query: 96  MSTYTIQGQPLEVTVIGCTKLKDTEWISRQDPYVCLEYGSTKFRTTTCTDGGRNPTFQEK 155
           MSTYTIQGQPLE TV+GCTKLKDTEWISRQDPYVCLEYGSTKFRTTTCTDGGRNPTFQ+K
Sbjct: 1   MSTYTIQGQPLEATVVGCTKLKDTEWISRQDPYVCLEYGSTKFRTTTCTDGGRNPTFQQK 60

Query: 156 FVFSLIEGLREINITVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSSWSLQTKTGRSIEF 215
           FVFSLIEGLREIN+TVWNSNTVTYDDFIG GKIQLAKVL+EGYDDSSWSLQTKTGR    
Sbjct: 61  FVFSLIEGLREINVTVWNSNTVTYDDFIGTGKIQLAKVLSEGYDDSSWSLQTKTGR---- 120

Query: 216 GIAISPFPLPSLSYGEIAPIHAGEVRLILHFASANRPSSSFTPSAPPFHAPTPPQVPAYA 275
                               HAGEVRLILHFA+A RPSSSF PSAPPF AP PPQVP Y 
Sbjct: 121 --------------------HAGEVRLILHFANAKRPSSSFAPSAPPFQAPAPPQVPVYT 180

Query: 276 TMPQAHPTAYPPPSATPYASFQSPYPSYPPSSGAYQTSMY-SPYPSGYPPTSYPAPPSAY 335
           TMP  HPTAY  P+ TPYAS+QSPYPSYPPSS AYQTSMY SPYPSGYPPTSYP PPSAY
Sbjct: 181 TMPPTHPTAYAHPTPTPYASYQSPYPSYPPSSVAYQTSMYSSPYPSGYPPTSYPPPPSAY 240

Query: 336 PPGPYPPPPQASPFYPPGPYPGVYPPPQY 364
           PP PYPP PQAS  YPP PY G+YPPP Y
Sbjct: 241 PPNPYPPHPQASSVYPPSPYHGLYPPPPY 245

BLAST of HG10018640 vs. TAIR 10
Match: AT4G34150.1 (Calcium-dependent lipid-binding (CaLB domain) family protein )

HSP 1 Score: 228.8 bits (582), Expect = 7.0e-60
Identity = 140/272 (51.47%), Postives = 164/272 (60.29%), Query Frame = 0

Query: 101 IQGQPLEVTVIGCTKLKDTEWISRQDPYVCLEYGSTKFRTTTCTDGGRNPTFQEKFVFSL 160
           IQGQ LEVTV+GC KLKDTEW SRQDPYV LEYG    RT TCTDGG+N  FQEKF+F+L
Sbjct: 7   IQGQILEVTVVGCQKLKDTEWFSRQDPYVVLEYGGRSHRTRTCTDGGKNAVFQEKFIFTL 66

Query: 161 IEGLREINITVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSSWSLQTKTGRSIEFGIAIS 220
           IEGLR++ + VWNSNT++ DDFIGN  IQL KVL++ YDD +W+LQ+KTGR         
Sbjct: 67  IEGLRDLKVAVWNSNTLSTDDFIGNATIQLQKVLSQEYDDCTWTLQSKTGR--------- 126

Query: 221 PFPLPSLSYGEIAPIHAGEVRLILHFASANR------PSSSFTPSAPPFHAPTPPQVPAY 280
                           AGEV+L+LH+A A +      PS+ + P  P + AP P   P  
Sbjct: 127 ---------------FAGEVQLLLHYAGAKKHNYGSAPSAPYAPHVPQYSAP-PSASPYS 186

Query: 281 ATMPQAHPTAYPPPSATPYASFQSPYPSYPPSSGAY---QTSMYSPYPSGYPPTSYPAPP 340
              P + P+ YP     P  S   P   YPP   AY    TS Y P PS YPP   P P 
Sbjct: 187 TAPPYSGPSLYPQVQQYPQPSGYPPASGYPPQPSAYPPPSTSGYPPIPSAYPP---PPPS 246

Query: 341 SAYPPGPYPPPPQASPFYPPGPYPGVYPPPQY 364
           SAYPP PYPP P    +YP GPYPG YPPP Y
Sbjct: 247 SAYPPQPYPPQPS---YYPQGPYPGQYPPPPY 247

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038888782.15.5e-12386.99protein SRC2 homolog [Benincasa hispida] >XP_038888783.1 protein SRC2 homolog [B... [more]
XP_008454977.14.3e-12085.61PREDICTED: leucine-rich repeat extensin-like protein 3 [Cucumis melo] >XP_008454... [more]
XP_011658892.14.1e-11884.19leucine-rich repeat extensin-like protein 3 [Cucumis sativus] >XP_031744405.1 le... [more]
XP_022147782.16.3e-11180.00protein SRC2 homolog [Momordica charantia] >XP_022147784.1 protein SRC2 homolog ... [more]
XP_023553843.14.1e-11079.93C2 domain-containing protein At1g63220-like [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A1S4E0J92.1e-12085.61leucine-rich repeat extensin-like protein 3 OS=Cucumis melo OX=3656 GN=LOC103495... [more]
A0A5D3C5U42.1e-12085.61Leucine-rich repeat extensin-like protein 3 OS=Cucumis melo var. makuwa OX=11946... [more]
A0A0A0K6H52.0e-11884.19C2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G073380 PE=4 SV=... [more]
A0A6J1D3B53.0e-11180.00protein SRC2 homolog OS=Momordica charantia OX=3673 GN=LOC111016635 PE=4 SV=1[more]
A0A6J1I8G99.8e-11079.55C2 domain-containing protein At1g63220-like OS=Cucurbita maxima OX=3661 GN=LOC11... [more]
Match NameE-valueIdentityDescription
AT4G34150.17.0e-6051.47Calcium-dependent lipid-binding (CaLB domain) family protein [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000008C2 domainSMARTSM00239C2_3ccoord: 105..202
e-value: 3.8E-13
score: 59.7
IPR000008C2 domainPFAMPF00168C2coord: 106..200
e-value: 1.8E-15
score: 57.1
IPR000008C2 domainPROSITEPS50004C2coord: 86..204
score: 15.108814
IPR035892C2 domain superfamilyGENE3D2.60.40.150C2 domaincoord: 104..220
e-value: 2.1E-21
score: 78.6
IPR035892C2 domain superfamilySUPERFAMILY49562C2 domain (Calcium/lipid-binding domain, CaLB)coord: 101..211
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 333..353
NoneNo IPR availablePANTHERPTHR47052:SF3CONSERVED SERINE PROLINE-RICH PROTEIN (AFU_ORTHOLOGUE AFUA_2G01790)coord: 98..362
NoneNo IPR availablePANTHERPTHR47052CONSERVED SERINE PROLINE-RICH PROTEIN (AFU_ORTHOLOGUE AFUA_2G01790)coord: 98..362
NoneNo IPR availableCDDcd00030C2coord: 106..203
e-value: 7.17528E-20
score: 81.7295

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10018640.1HG10018640.1mRNA