HG10018611 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10018611
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Thioredoxin M3
Location	Chr04: 5836979 .. 5839939 (-)
RNA-Seq Expression	HG10018611
Synteny	HG10018611

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGCCTCCTTCTCTTTCTCTACTCCTCAAACTCTTCCCAACCGCCTTTCCCCTCATTCTAACCTCAATTCCCTTCGCCTTTTCTCTCCTCCTTCCAATCTGCGTCTCAATCGCCGCGTTACGCCTCCAAATACTTCTCTCACTCTCAACATCCAATGCATCAGTCAACTTAAAGGTTTTCCGCTTCTCTCTGCTTTTTTTTTTTTTTCTATTCTTTAGTTTGCATGTTACACTCGCCGATTTCCTATCTTTCTCTAATTTATCACTTACTATAGGTTTTTCTACGTTCTACATATGAGATCTTGATTTGTTGCCATTTTCTTCTTTTGGATTTTGTTTAATTATTGCGCTCTATGTATTGGAGGAATTTAATTGTTGATGGAAATTTTAATAACTGAACGAGATTGACTTTGTTTACATATTAGATTATTGTTTTAAAATACAATCTTATCATTTATTTTGTTTTGTTACTTTACTGATAATTAAACTAATGTTGGCAATGCTCGTATTAATTCGAGATCCAATCTTAACTTTGGGAGTAAAGGCAAGCTGGAATGCTGCACATTCCTGAAATAGAAGAATTTCAAGATCTGGTCAATGTATTGCGAAACTTGCGTTATTCGTCGTAGTTATTTTATATATAATTTTAGGTGAACATTTGATTGATTCCTCTTTTGTAGTGTTTCAATATTTAAACGTTTTTGCCTATTTTTGACTTGTTGTTAAATTTGATGCTTTTATCAAGAGCGAATCTGAAAAATGCTACTTCTTGGTAACTACTGGATAGGAAAGGATTAACTATTGTGTTATTAGGGTTTTCAATTATACCATGGTTGAAGATTTGAATAGAAACAGGACATGGACGACTATATTTCATAGCAATCTGATGCCCATTATTTACACATTGAACAACCCTTAGATCCAAGTCAAAACAAATCTTGTAGCTGCTTGTGCTTAGAAACTGCACTTGCACTTGCATATGATTTAAGTTGAGCTTGTCAAGCATGGTAACTCCTTTCATCAGCTTTCAAGAGTTAGTAATTTTGAGTGAGATCTTTCTCGCTTTGGGTTTGTTCTTTTTTTTTTTTTTTGTTTTTTTGTTTAATTGCTACTGTACGTGCATTTAATTTCCAAGTTTATAGAGTAATTCTTTTTTCTTATTTGTTCTGATCTGATGATCTGACAAGGCAATAGTGCCTCTTCTGACTTTCTGGCTCACATCTTGTTGAAATGATAGTACGTAGATTATTCTTGGTCATTTTTCATTCATTGTATTTGGTACTTAATACATATATGGTTTTGTTGTATGTTCCCCATCATTTTAATTTACAACGGAAACATGAACTTTACCAAATGAACCTTTGTTTGTTTTTGAATGATGTTTTCCCGTTGATATTAGGACTAATTGCATAAAAAACCTATTTTAAAGGCCCAAAATGACAAATGACCTAATTTTTGAAAAAAAATGTCAAATGACCCTTTGATTATGTCATGACAACGTGAAATTACACCATTTCCCTTCTTTTTTTTTTTCTCTTCTTTCTCCAGCGTTCTGACTCCCCCCCCCCCCCCTTTTTTTTCTTTTTTCTCTTCTTCCCCAGTATCCTCCTCCCTTTTTTTCTTCTTCGTTTTCTCCGTATTCAACTTTTTCTGCGACTTCTTCTTCTTCTCCGGCACGACAAGTCACATGAGCAGCTTCGACGCGACCAACTCCGGTGAGCGACAGTGTGAGAGAGCGAGAGCGAGAGCGAGAGTGAGCGAGAGCGACTGTGAGTGAAAGTGAGTGAGAGCAATGGTGAGTGAAAGTGAGTGAGAGTGAGCGCGAGAAAGATGAGAGTGATTGTGAGTGAGAAAAGAGAGCGAGAGCGAAATGGGTTTTTCCGCTTGCACGAGTTCATTTGGGTAATTTCATCCAATCTTGACGTCAGCAAATGGTCATTTGTCATATTTTCGAAAATCCGGGTCATTTGACATTTTTCGCCTAATTTTTGAGTTATCCATCAAATTTCCCTTGATATTAATACTTCATCTCGTTTCTTGTCCAAAGTATGCATGTGGTGTACCATCTTTTAAAAGACAAATAATTTGTGTACACAATATCAATCTCTTTGGTTCTCTTATTTTGTTAGAAAGGGAAGAAAAATGTTGGGCTAAATTATTCTAGGAAACGTTTGCCTGTGGAATTAGTATCTTGTATGAATAGATTATCATGACAGTCTTATATTTTGAGGTATCATTAAAAGTCATCATTCCTCCCTGAAGAAATGCCTTCTTTATCCAGTGAACAATCATTTCCAAGCCGTTAAACCTTACTGCATACTATGGAAATTCATAATTGATAAAATATGTTCACATATGGTATCATTAACAGATTACTCTTTTGCAACTATGTGAGAACCTTAGTATTAAAATTTTTTATGCTCATTGGAATCCAGTGTTTAATTGATAAAATTGGTGTACTGCCAATATGGACTTCCATCCGCCAACTTGAGCATAGCTATATTGGTTTAGGCATATATATCTTCGACGAAGAGGTTAGAGGTTCAAATCCTCTCATCTCTACATGTTAAACTAAAAAAAATCTGGACTTCCATCCCCAGAATGCCTTTCTGAATAATCTTGCTATTGTCATACACAGCTGAGGTGGTTACCAAAGACTCATGGAATAAAATGATTCTAGAGAGCGGAACCCTTGTCCTGGTTGAATTTTATGCTAGTTGGTGTGGACCATGTAGAATGGTCCATCGAGTCATCGATGAGCTAGCTGCTGAATATGAGGGGAAGCTCAAATGCTTTGTACTCAACACCGACACCGATTTGCAAATAGCTGAAGACTACGAAATTAAGGCTGTTCCTGTGGTTATGCTGTTCAAGGATGGGGAGAAATGCGATAGCATCATCGGTACCATGCCAAAAGATTTCTATATTGCTGCCATTGAAAGGGTTCTCAAGCAGTAG

mRNA sequence

ATGGCCGCCTCCTTCTCTTTCTCTACTCCTCAAACTCTTCCCAACCGCCTTTCCCCTCATTCTAACCTCAATTCCCTTCGCCTTTTCTCTCCTCCTTCCAATCTGCGTCTCAATCGCCGCGTTACGCCTCCAAATACTTCTCTCACTCTCAACATCCAATGCATCAGTCAACTTAAAGCTGAGGTGGTTACCAAAGACTCATGGAATAAAATGATTCTAGAGAGCGGAACCCTTGTCCTGGTTGAATTTTATGCTAGTTGGTGTGGACCATGTAGAATGGTCCATCGAGTCATCGATGAGCTAGCTGCTGAATATGAGGGGAAGCTCAAATGCTTTGTACTCAACACCGACACCGATTTGCAAATAGCTGAAGACTACGAAATTAAGGCTGTTCCTGTGGTTATGCTGTTCAAGGATGGGGAGAAATGCGATAGCATCATCGGTACCATGCCAAAAGATTTCTATATTGCTGCCATTGAAAGGGTTCTCAAGCAGTAG

Coding sequence (CDS)

ATGGCCGCCTCCTTCTCTTTCTCTACTCCTCAAACTCTTCCCAACCGCCTTTCCCCTCATTCTAACCTCAATTCCCTTCGCCTTTTCTCTCCTCCTTCCAATCTGCGTCTCAATCGCCGCGTTACGCCTCCAAATACTTCTCTCACTCTCAACATCCAATGCATCAGTCAACTTAAAGCTGAGGTGGTTACCAAAGACTCATGGAATAAAATGATTCTAGAGAGCGGAACCCTTGTCCTGGTTGAATTTTATGCTAGTTGGTGTGGACCATGTAGAATGGTCCATCGAGTCATCGATGAGCTAGCTGCTGAATATGAGGGGAAGCTCAAATGCTTTGTACTCAACACCGACACCGATTTGCAAATAGCTGAAGACTACGAAATTAAGGCTGTTCCTGTGGTTATGCTGTTCAAGGATGGGGAGAAATGCGATAGCATCATCGGTACCATGCCAAAAGATTTCTATATTGCTGCCATTGAAAGGGTTCTCAAGCAGTAG

Protein sequence

MAASFSFSTPQTLPNRLSPHSNLNSLRLFSPPSNLRLNRRVTPPNTSLTLNIQCISQLKAEVVTKDSWNKMILESGTLVLVEFYASWCGPCRMVHRVIDELAAEYEGKLKCFVLNTDTDLQIAEDYEIKAVPVVMLFKDGEKCDSIIGTMPKDFYIAAIERVLKQ

Homology

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BLAST of HG10018611 vs. NCBI nr
Match: XP_038887358.1 (thioredoxin M3, chloroplastic [Benincasa hispida])

HSP 1 Score: 314.3 bits (804), Expect = 6.2e-82
Identity = 153/165 (92.73%), Postives = 160/165 (96.97%), Query Frame = 0


Query: 1   MAASFSFSTPQTLPNRLSPHSNLNSLRLFSPPSNLRLNRRVTPPNTSLTLNIQCISQLKA 60
           MAASFSFSTPQTLPNR+SPHSNLNSLRLFSPPS+LRLNRR+ P N SLTLN+QCISQ KA
Sbjct: 1   MAASFSFSTPQTLPNRISPHSNLNSLRLFSPPSSLRLNRRLKPRNASLTLNVQCISQPKA 60

Query: 61  EVVTKDSWNKMILESGTLVLVEFYASWCGPCRMVHRVIDELAAEYEGKLKCFVLNTDTDL 120
           EVVTKDSWNKMILESGT VLVEFYASWCGPCRMVHRVIDELAAEYEGKLKCFVLNTDTD+
Sbjct: 61  EVVTKDSWNKMILESGTTVLVEFYASWCGPCRMVHRVIDELAAEYEGKLKCFVLNTDTDM 120

Query: 121 QIAEDYEIKAVPVVMLFKDGEKCDSIIGTMPKDFYIAAIERVLKQ 166
           QIAEDYEIKAVPVVMLFK+GEKCDS+IGTMPKDFYIAAIERVLKQ
Sbjct: 121 QIAEDYEIKAVPVVMLFKNGEKCDSVIGTMPKDFYIAAIERVLKQ 165

[Close]

BLAST of HG10018611 vs. NCBI nr
Match: XP_008454954.1 (PREDICTED: thioredoxin M3, chloroplastic [Cucumis melo] >KAA0031302.1 thioredoxin M3 [Cucumis melo var. makuwa] >TYK06754.1 thioredoxin M3 [Cucumis melo var. makuwa])

HSP 1 Score: 305.1 bits (780), Expect = 3.8e-79
Identity = 149/165 (90.30%), Postives = 157/165 (95.15%), Query Frame = 0


Query: 1   MAASFSFSTPQTLPNRLSPHSNLNSLRLFSPPSNLRLNRRVTPPNTSLTLNIQCISQLKA 60
           MAAS SFSTPQT P+R+SP+SNLNSLRLFSPPSNLR+NRR  P N SLTLNIQCISQ KA
Sbjct: 1   MAASISFSTPQTHPHRISPYSNLNSLRLFSPPSNLRINRRPNPRNASLTLNIQCISQPKA 60

Query: 61  EVVTKDSWNKMILESGTLVLVEFYASWCGPCRMVHRVIDELAAEYEGKLKCFVLNTDTDL 120
           EVVTKDSWNKMILESGT VLVEFYASWCGPCRMVHRVIDELAAEYEGKLKCFVLNTDTDL
Sbjct: 61  EVVTKDSWNKMILESGTPVLVEFYASWCGPCRMVHRVIDELAAEYEGKLKCFVLNTDTDL 120

Query: 121 QIAEDYEIKAVPVVMLFKDGEKCDSIIGTMPKDFYIAAIERVLKQ 166
           Q+AEDYEIKAVPVVMLFK+GEKCDS+IGTMPKDFYIAA+ERVLKQ
Sbjct: 121 QVAEDYEIKAVPVVMLFKNGEKCDSVIGTMPKDFYIAAVERVLKQ 165

[Close]

BLAST of HG10018611 vs. NCBI nr
Match: XP_004136977.1 (thioredoxin M3, chloroplastic [Cucumis sativus] >KGN43925.1 hypothetical protein Csa_017328 [Cucumis sativus])

HSP 1 Score: 300.4 bits (768), Expect = 9.3e-78
Identity = 147/165 (89.09%), Postives = 156/165 (94.55%), Query Frame = 0


Query: 1   MAASFSFSTPQTLPNRLSPHSNLNSLRLFSPPSNLRLNRRVTPPNTSLTLNIQCISQLKA 60
           MAASFSFST QT P+R+SP+SNLNSLRLFSPPSNL  NRR+ P N SLTLNIQCISQ KA
Sbjct: 1   MAASFSFSTSQTHPDRISPYSNLNSLRLFSPPSNLPFNRRLNPRNASLTLNIQCISQPKA 60

Query: 61  EVVTKDSWNKMILESGTLVLVEFYASWCGPCRMVHRVIDELAAEYEGKLKCFVLNTDTDL 120
           EVVTKDSWNKMILESGT VLVEFYASWCGPCRMVHRVIDE+AAEY+GKLKCFVLNTDTDL
Sbjct: 61  EVVTKDSWNKMILESGTPVLVEFYASWCGPCRMVHRVIDEIAAEYDGKLKCFVLNTDTDL 120

Query: 121 QIAEDYEIKAVPVVMLFKDGEKCDSIIGTMPKDFYIAAIERVLKQ 166
           QIAEDYEIKAVPVVMLFK+GEKCDS+IGTMPKDFYIAA+ERVLKQ
Sbjct: 121 QIAEDYEIKAVPVVMLFKNGEKCDSVIGTMPKDFYIAAVERVLKQ 165

[Close]

BLAST of HG10018611 vs. NCBI nr
Match: KAG6588665.1 (Thioredoxin M3, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7022451.1 Thioredoxin M3, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 288.5 bits (737), Expect = 3.6e-74
Identity = 140/165 (84.85%), Postives = 151/165 (91.52%), Query Frame = 0


Query: 1   MAASFSFSTPQTLPNRLSPHSNLNSLRLFSPPSNLRLNRRVTPPNTSLTLNIQCISQLKA 60
           MA+S  FS PQTLPNR+S HSNLNSL  FSPPSNLRL+RR+   N SLTLN+QC+SQ KA
Sbjct: 1   MASSLPFSVPQTLPNRISSHSNLNSLCFFSPPSNLRLHRRIRARNASLTLNVQCVSQAKA 60

Query: 61  EVVTKDSWNKMILESGTLVLVEFYASWCGPCRMVHRVIDELAAEYEGKLKCFVLNTDTDL 120
           EVVTK+SWNKMILESG  VLVEFYASWCGPCRMVHRVIDELAA+YEGKLKCFVLNTD DL
Sbjct: 61  EVVTKESWNKMILESGIPVLVEFYASWCGPCRMVHRVIDELAADYEGKLKCFVLNTDKDL 120

Query: 121 QIAEDYEIKAVPVVMLFKDGEKCDSIIGTMPKDFYIAAIERVLKQ 166
           QIAEDYEIKAVPVVMLFK+GEKC+S+IGTMPKDFYIAAIERVLKQ
Sbjct: 121 QIAEDYEIKAVPVVMLFKNGEKCESVIGTMPKDFYIAAIERVLKQ 165

[Close]

BLAST of HG10018611 vs. NCBI nr
Match: XP_022927893.1 (thioredoxin M3, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 286.2 bits (731), Expect = 1.8e-73
Identity = 139/165 (84.24%), Postives = 150/165 (90.91%), Query Frame = 0


Query: 1   MAASFSFSTPQTLPNRLSPHSNLNSLRLFSPPSNLRLNRRVTPPNTSLTLNIQCISQLKA 60
           MA+   FS PQTLPNR+S HSNLNSL  FSPPSNLRL+RR+   N SLTLN+QC+SQ KA
Sbjct: 23  MASYLPFSVPQTLPNRISSHSNLNSLCFFSPPSNLRLHRRIRARNASLTLNVQCVSQAKA 82

Query: 61  EVVTKDSWNKMILESGTLVLVEFYASWCGPCRMVHRVIDELAAEYEGKLKCFVLNTDTDL 120
           EVVTK+SWNKMILESG  VLVEFYASWCGPCRMVHRVIDELAA+YEGKLKCFVLNTD DL
Sbjct: 83  EVVTKESWNKMILESGIPVLVEFYASWCGPCRMVHRVIDELAADYEGKLKCFVLNTDKDL 142

Query: 121 QIAEDYEIKAVPVVMLFKDGEKCDSIIGTMPKDFYIAAIERVLKQ 166
           QIAEDYEIKAVPVVMLFK+GEKC+S+IGTMPKDFYIAAIERVLKQ
Sbjct: 143 QIAEDYEIKAVPVVMLFKNGEKCESVIGTMPKDFYIAAIERVLKQ 187

[Close]

BLAST of HG10018611 vs. ExPASy Swiss-Prot
Match: Q9SEU7 (Thioredoxin M3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GAT1 PE=2 SV=2)

HSP 1 Score: 166.8 bits (421), Expect = 2.1e-40
Identity = 91/171 (53.22%), Postives = 117/171 (68.42%), Query Frame = 0


Query: 1   MAASFSFSTPQTLPNR------LSPHSNLNSLRLFSPPSNLRLNRR--VTPPNTSLTLNI 60
           MA S S S+    P R      +S  S L  +  FSP S    +RR  ++   + L L+ 
Sbjct: 1   MAISSSSSSICFNPTRFHTARHISSPSRLFPVTSFSPRSLRFSDRRSLLSSSASRLRLSP 60

Query: 61  QCISQLKAEVVTKDSWNKMILESGTLVLVEFYASWCGPCRMVHRVIDELAAEYEGKLKCF 120
            C+   +A  VT+ SW   +L+S T VLVEFY SWCGPCRMVHR+IDE+A +Y GKL C+
Sbjct: 61  LCVRDSRAAEVTQRSWEDSVLKSETPVLVEFYTSWCGPCRMVHRIIDEIAGDYAGKLNCY 120

Query: 121 VLNTDTDLQIAEDYEIKAVPVVMLFKDGEKCDSIIGTMPKDFYIAAIERVL 164
           +LN D DL +AE+YEIKAVPVV+LFK+GEK +SI+GTMPK+FYI+AIERVL
Sbjct: 121 LLNADNDLPVAEEYEIKAVPVVLLFKNGEKRESIMGTMPKEFYISAIERVL 171

[Close]

BLAST of HG10018611 vs. ExPASy Swiss-Prot
Match: Q7XQQ2 (Thioredoxin M3, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0430800 PE=2 SV=4)

HSP 1 Score: 132.9 bits (333), Expect = 3.4e-30
Identity = 56/102 (54.90%), Postives = 77/102 (75.49%), Query Frame = 0


Query: 60  AEVVTKDSWNKMILESGTLVLVEFYASWCGPCRMVHRVIDELAAEYEGKLKCFVLNTDTD 119
           A+ +T  SWN+ ++ S   VL+EF+ASWCGPCRMVHR++DE+A EY G++KC+ L+TD  
Sbjct: 67  AKTITACSWNEYVICSDIPVLIEFWASWCGPCRMVHRIVDEIAQEYAGRIKCYKLDTDDY 126

Query: 120 LQIAEDYEIKAVPVVMLFKDGEKCDSIIGTMPKDFYIAAIER 162
            Q+A  Y I+ +P V+LFKDGEK  SI GT+PK  Y+ AIE+
Sbjct: 127 PQVATSYSIERIPTVLLFKDGEKTHSITGTLPKAVYVRAIEK 168

[Close]

BLAST of HG10018611 vs. ExPASy Swiss-Prot
Match: Q6H7E4 (Thioredoxin M1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0639900 PE=2 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 6.6e-26
Identity = 48/101 (47.52%), Postives = 76/101 (75.25%), Query Frame = 0


Query: 63  VTKDSWNKMILESGTLVLVEFYASWCGPCRMVHRVIDELAAEYEGKLKCFVLNTDTDLQI 122
           VTK +W  +++ES   VLVEF+ASWCGPC+M+  VI +L+ EYEGKL C+ LNTD +  I
Sbjct: 71  VTKSTWQSLVVESELPVLVEFWASWCGPCKMIDPVIGKLSKEYEGKLNCYKLNTDENPDI 130

Query: 123 AEDYEIKAVPVVMLFKDGEKCDSIIGTMPKDFYIAAIERVL 164
           A  + I+++P +M+FK+GEK D++IG +P+   +++I++ +
Sbjct: 131 ATQFGIRSIPTMMIFKNGEKKDAVIGAVPESTLVSSIDKYI 171

[Close]

BLAST of HG10018611 vs. ExPASy Swiss-Prot
Match: Q7X8R5 (Thioredoxin M2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0530600 PE=2 SV=2)

HSP 1 Score: 117.5 bits (293), Expect = 1.5e-25
Identity = 61/164 (37.20%), Postives = 97/164 (59.15%), Query Frame = 0


Query: 3   ASFSFSTPQTLPNRLSPHSNLNSLRLFSPPSNLRLNRRVTPPNTSLTLNIQ-CISQLKAE 62
           AS S S       R  P S     +     S    NRR      S+   +Q   + ++  
Sbjct: 17  ASASASASSARRLRAVPPSRGIRYQALRADSGFAGNRRGGGRGASVVCAVQGQDTSIQVP 76

Query: 63  VVTKDSWNKMILESGTLVLVEFYASWCGPCRMVHRVIDELAAEYEGKLKCFVLNTDTDLQ 122
            VTK +W  +++ES   VLV ++A+WCGPC+M+  V+ +L+ EYEGKLKC+ LNTD +  
Sbjct: 77  EVTKSTWQSLVMESELPVLVGYWATWCGPCKMIDPVVGKLSKEYEGKLKCYKLNTDENPD 136

Query: 123 IAEDYEIKAVPVVMLFKDGEKCDSIIGTMPKDFYIAAIERVLKQ 166
           IA  Y ++++P +M+FK+GEK D++IG +P+   IA+IE+ +++
Sbjct: 137 IASQYGVRSIPTMMIFKNGEKKDAVIGAVPESTLIASIEKFVER 180

[Close]

BLAST of HG10018611 vs. ExPASy Swiss-Prot
Match: P23400 (Thioredoxin M-type, chloroplastic OS=Chlamydomonas reinhardtii OX=3055 GN=TRXM PE=1 SV=3)

HSP 1 Score: 117.5 bits (293), Expect = 1.5e-25
Identity = 48/109 (44.04%), Postives = 76/109 (69.72%), Query Frame = 0


Query: 55  ISQLKAEVVTKDSWNKMILESGTLVLVEFYASWCGPCRMVHRVIDELAAEYEGKLKCFVL 114
           + + +A  V  D++  ++LES   VLV+F+A WCGPCR++  V+DE+A EY+ KLKC  L
Sbjct: 31  VVRAEAGAVNDDTFKNVVLESSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKDKLKCVKL 90

Query: 115 NTDTDLQIAEDYEIKAVPVVMLFKDGEKCDSIIGTMPKDFYIAAIERVL 164
           NTD    +A +Y I+++P +M+FK G+KC++IIG +PK   +  +E+ L
Sbjct: 91  NTDESPNVASEYGIRSIPTIMVFKGGKKCETIIGAVPKATIVQTVEKYL 139

[Close]

BLAST of HG10018611 vs. ExPASy TrEMBL
Match: A0A5D3C652 (Thioredoxin M3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G00550 PE=4 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 1.8e-79
Identity = 149/165 (90.30%), Postives = 157/165 (95.15%), Query Frame = 0


Query: 1   MAASFSFSTPQTLPNRLSPHSNLNSLRLFSPPSNLRLNRRVTPPNTSLTLNIQCISQLKA 60
           MAAS SFSTPQT P+R+SP+SNLNSLRLFSPPSNLR+NRR  P N SLTLNIQCISQ KA
Sbjct: 1   MAASISFSTPQTHPHRISPYSNLNSLRLFSPPSNLRINRRPNPRNASLTLNIQCISQPKA 60

Query: 61  EVVTKDSWNKMILESGTLVLVEFYASWCGPCRMVHRVIDELAAEYEGKLKCFVLNTDTDL 120
           EVVTKDSWNKMILESGT VLVEFYASWCGPCRMVHRVIDELAAEYEGKLKCFVLNTDTDL
Sbjct: 61  EVVTKDSWNKMILESGTPVLVEFYASWCGPCRMVHRVIDELAAEYEGKLKCFVLNTDTDL 120

Query: 121 QIAEDYEIKAVPVVMLFKDGEKCDSIIGTMPKDFYIAAIERVLKQ 166
           Q+AEDYEIKAVPVVMLFK+GEKCDS+IGTMPKDFYIAA+ERVLKQ
Sbjct: 121 QVAEDYEIKAVPVVMLFKNGEKCDSVIGTMPKDFYIAAVERVLKQ 165

[Close]

BLAST of HG10018611 vs. ExPASy TrEMBL
Match: A0A1S3C0H5 (thioredoxin M3, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103495242 PE=4 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 1.8e-79
Identity = 149/165 (90.30%), Postives = 157/165 (95.15%), Query Frame = 0


Query: 1   MAASFSFSTPQTLPNRLSPHSNLNSLRLFSPPSNLRLNRRVTPPNTSLTLNIQCISQLKA 60
           MAAS SFSTPQT P+R+SP+SNLNSLRLFSPPSNLR+NRR  P N SLTLNIQCISQ KA
Sbjct: 1   MAASISFSTPQTHPHRISPYSNLNSLRLFSPPSNLRINRRPNPRNASLTLNIQCISQPKA 60

Query: 61  EVVTKDSWNKMILESGTLVLVEFYASWCGPCRMVHRVIDELAAEYEGKLKCFVLNTDTDL 120
           EVVTKDSWNKMILESGT VLVEFYASWCGPCRMVHRVIDELAAEYEGKLKCFVLNTDTDL
Sbjct: 61  EVVTKDSWNKMILESGTPVLVEFYASWCGPCRMVHRVIDELAAEYEGKLKCFVLNTDTDL 120

Query: 121 QIAEDYEIKAVPVVMLFKDGEKCDSIIGTMPKDFYIAAIERVLKQ 166
           Q+AEDYEIKAVPVVMLFK+GEKCDS+IGTMPKDFYIAA+ERVLKQ
Sbjct: 121 QVAEDYEIKAVPVVMLFKNGEKCDSVIGTMPKDFYIAAVERVLKQ 165

[Close]

BLAST of HG10018611 vs. ExPASy TrEMBL
Match: A0A0A0K2M6 (Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G073610 PE=4 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 4.5e-78
Identity = 147/165 (89.09%), Postives = 156/165 (94.55%), Query Frame = 0


Query: 1   MAASFSFSTPQTLPNRLSPHSNLNSLRLFSPPSNLRLNRRVTPPNTSLTLNIQCISQLKA 60
           MAASFSFST QT P+R+SP+SNLNSLRLFSPPSNL  NRR+ P N SLTLNIQCISQ KA
Sbjct: 1   MAASFSFSTSQTHPDRISPYSNLNSLRLFSPPSNLPFNRRLNPRNASLTLNIQCISQPKA 60

Query: 61  EVVTKDSWNKMILESGTLVLVEFYASWCGPCRMVHRVIDELAAEYEGKLKCFVLNTDTDL 120
           EVVTKDSWNKMILESGT VLVEFYASWCGPCRMVHRVIDE+AAEY+GKLKCFVLNTDTDL
Sbjct: 61  EVVTKDSWNKMILESGTPVLVEFYASWCGPCRMVHRVIDEIAAEYDGKLKCFVLNTDTDL 120

Query: 121 QIAEDYEIKAVPVVMLFKDGEKCDSIIGTMPKDFYIAAIERVLKQ 166
           QIAEDYEIKAVPVVMLFK+GEKCDS+IGTMPKDFYIAA+ERVLKQ
Sbjct: 121 QIAEDYEIKAVPVVMLFKNGEKCDSVIGTMPKDFYIAAVERVLKQ 165

[Close]

BLAST of HG10018611 vs. ExPASy TrEMBL
Match: A0A6J1EMB5 (thioredoxin M3, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111434657 PE=4 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 8.8e-74
Identity = 139/165 (84.24%), Postives = 150/165 (90.91%), Query Frame = 0


Query: 1   MAASFSFSTPQTLPNRLSPHSNLNSLRLFSPPSNLRLNRRVTPPNTSLTLNIQCISQLKA 60
           MA+   FS PQTLPNR+S HSNLNSL  FSPPSNLRL+RR+   N SLTLN+QC+SQ KA
Sbjct: 23  MASYLPFSVPQTLPNRISSHSNLNSLCFFSPPSNLRLHRRIRARNASLTLNVQCVSQAKA 82

Query: 61  EVVTKDSWNKMILESGTLVLVEFYASWCGPCRMVHRVIDELAAEYEGKLKCFVLNTDTDL 120
           EVVTK+SWNKMILESG  VLVEFYASWCGPCRMVHRVIDELAA+YEGKLKCFVLNTD DL
Sbjct: 83  EVVTKESWNKMILESGIPVLVEFYASWCGPCRMVHRVIDELAADYEGKLKCFVLNTDKDL 142

Query: 121 QIAEDYEIKAVPVVMLFKDGEKCDSIIGTMPKDFYIAAIERVLKQ 166
           QIAEDYEIKAVPVVMLFK+GEKC+S+IGTMPKDFYIAAIERVLKQ
Sbjct: 143 QIAEDYEIKAVPVVMLFKNGEKCESVIGTMPKDFYIAAIERVLKQ 187

[Close]

BLAST of HG10018611 vs. ExPASy TrEMBL
Match: A0A6J1JEI0 (thioredoxin M3, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111486177 PE=4 SV=1)

HSP 1 Score: 285.0 bits (728), Expect = 2.0e-73
Identity = 139/165 (84.24%), Postives = 150/165 (90.91%), Query Frame = 0


Query: 1   MAASFSFSTPQTLPNRLSPHSNLNSLRLFSPPSNLRLNRRVTPPNTSLTLNIQCISQLKA 60
           MA+S  FS  QTLPNR+S HSNLNSL  FSPPSNLRL+RR+   N SLTLN+QC+SQ KA
Sbjct: 1   MASSLPFSVHQTLPNRISSHSNLNSLCFFSPPSNLRLHRRIRARNASLTLNVQCVSQAKA 60

Query: 61  EVVTKDSWNKMILESGTLVLVEFYASWCGPCRMVHRVIDELAAEYEGKLKCFVLNTDTDL 120
           EVVTK+SWNKMILESG  VLVEFYASWCGPCRMVHRVIDELAA+YEGKLKCFVLNTD DL
Sbjct: 61  EVVTKESWNKMILESGIPVLVEFYASWCGPCRMVHRVIDELAADYEGKLKCFVLNTDKDL 120

Query: 121 QIAEDYEIKAVPVVMLFKDGEKCDSIIGTMPKDFYIAAIERVLKQ 166
           QIAEDYEIKAVPVVMLFK+GEKC+S+IGTMPKDFYIAAIERVLKQ
Sbjct: 121 QIAEDYEIKAVPVVMLFKNGEKCESVIGTMPKDFYIAAIERVLKQ 165

[Close]

BLAST of HG10018611 vs. TAIR 10
Match: AT2G15570.1 (Thioredoxin superfamily protein )

HSP 1 Score: 166.8 bits (421), Expect = 1.5e-41
Identity = 91/171 (53.22%), Postives = 117/171 (68.42%), Query Frame = 0


Query: 1   MAASFSFSTPQTLPNR------LSPHSNLNSLRLFSPPSNLRLNRR--VTPPNTSLTLNI 60
           MA S S S+    P R      +S  S L  +  FSP S    +RR  ++   + L L+ 
Sbjct: 1   MAISSSSSSICFNPTRFHTARHISSPSRLFPVTSFSPRSLRFSDRRSLLSSSASRLRLSP 60

Query: 61  QCISQLKAEVVTKDSWNKMILESGTLVLVEFYASWCGPCRMVHRVIDELAAEYEGKLKCF 120
            C+   +A  VT+ SW   +L+S T VLVEFY SWCGPCRMVHR+IDE+A +Y GKL C+
Sbjct: 61  LCVRDSRAAEVTQRSWEDSVLKSETPVLVEFYTSWCGPCRMVHRIIDEIAGDYAGKLNCY 120

Query: 121 VLNTDTDLQIAEDYEIKAVPVVMLFKDGEKCDSIIGTMPKDFYIAAIERVL 164
           +LN D DL +AE+YEIKAVPVV+LFK+GEK +SI+GTMPK+FYI+AIERVL
Sbjct: 121 LLNADNDLPVAEEYEIKAVPVVLLFKNGEKRESIMGTMPKEFYISAIERVL 171

[Close]

BLAST of HG10018611 vs. TAIR 10
Match: AT2G15570.2 (Thioredoxin superfamily protein )

HSP 1 Score: 162.9 bits (411), Expect = 2.2e-40
Identity = 91/172 (52.91%), Postives = 117/172 (68.02%), Query Frame = 0


Query: 1   MAASFSFSTPQTLPNR------LSPHSNLNSLRLFSPPSNLRLNRR--VTPPNTSLTLNI 60
           MA S S S+    P R      +S  S L  +  FSP S    +RR  ++   + L L+ 
Sbjct: 1   MAISSSSSSICFNPTRFHTARHISSPSRLFPVTSFSPRSLRFSDRRSLLSSSASRLRLSP 60

Query: 61  QCISQLKAEV-VTKDSWNKMILESGTLVLVEFYASWCGPCRMVHRVIDELAAEYEGKLKC 120
            C+   +A   VT+ SW   +L+S T VLVEFY SWCGPCRMVHR+IDE+A +Y GKL C
Sbjct: 61  LCVRDSRAAAEVTQRSWEDSVLKSETPVLVEFYTSWCGPCRMVHRIIDEIAGDYAGKLNC 120

Query: 121 FVLNTDTDLQIAEDYEIKAVPVVMLFKDGEKCDSIIGTMPKDFYIAAIERVL 164
           ++LN D DL +AE+YEIKAVPVV+LFK+GEK +SI+GTMPK+FYI+AIERVL
Sbjct: 121 YLLNADNDLPVAEEYEIKAVPVVLLFKNGEKRESIMGTMPKEFYISAIERVL 172

[Close]

BLAST of HG10018611 vs. TAIR 10
Match: AT3G15360.1 (thioredoxin M-type 4 )

HSP 1 Score: 109.8 bits (273), Expect = 2.2e-24
Identity = 64/171 (37.43%), Postives = 92/171 (53.80%), Query Frame = 0


Query: 2   AASFSFSTPQTLPNRLSPHSNL------NSLRLFSPPSNLRLNRRV-TPPNTSLTLNIQC 61
           + S S + P     R+SP   L      +S  L +  ++L  NRR        +    Q 
Sbjct: 21  SVSSSSAAPSVSRRRISPARFLEFRGLKSSRSLVTQSASLGANRRTRIARGGRIACEAQD 80

Query: 62  ISQLKAEV--VTKDSWNKMILESGTLVLVEFYASWCGPCRMVHRVIDELAAEYEGKLKCF 121
            +    EV  ++   W   +LES   VLVEF+A WCGPCRM+H ++D+LA ++ GK K +
Sbjct: 81  TTAAAVEVPNLSDSEWQTKVLESDVPVLVEFWAPWCGPCRMIHPIVDQLAKDFAGKFKFY 140

Query: 122 VLNTDTDLQIAEDYEIKAVPVVMLFKDGEKCDSIIGTMPKDFYIAAIERVL 164
            +NTD     A  Y I++VP V++FK GEK DSIIG +P++     IER L
Sbjct: 141 KINTDESPNTANRYGIRSVPTVIIFKGGEKKDSIIGAVPRETLEKTIERFL 191

[Close]

BLAST of HG10018611 vs. TAIR 10
Match: AT4G03520.1 (Thioredoxin superfamily protein )

HSP 1 Score: 97.8 bits (242), Expect = 8.5e-21
Identity = 50/158 (31.65%), Postives = 92/158 (58.23%), Query Frame = 0


Query: 21  SNLNSLRLFS---PPSNLRLNRRVTPPN---------TSLTLNIQCISQ---LKAEVVTK 80
           S+L+S R+F+     S LR+   ++P +         + L   + C +Q      +VV  
Sbjct: 28  SSLSSRRMFAVLPESSGLRIRLSLSPASLTSIHQPRVSRLRRAVVCEAQETTTDIQVVND 87

Query: 81  DSWNKMILESGTLVLVEFYASWCGPCRMVHRVIDELAAEYEGKLKCFVLNTDTDLQIAED 140
            +W+ ++L++   V+V+F+A WCGPC+M+  ++++LA  Y GK+K + LNTD        
Sbjct: 88  STWDSLVLKATGPVVVDFWAPWCGPCKMIDPLVNDLAQHYTGKIKFYKLNTDESPNTPGQ 147

Query: 141 YEIKAVPVVMLFKDGEKCDSIIGTMPKDFYIAAIERVL 164
           Y ++++P +M+F  GEK D+IIG +PK    +++++ L
Sbjct: 148 YGVRSIPTIMIFVGGEKKDTIIGAVPKTTLTSSLDKFL 185

[Close]

BLAST of HG10018611 vs. TAIR 10
Match: AT1G03680.1 (thioredoxin M-type 1 )

HSP 1 Score: 96.7 bits (239), Expect = 1.9e-20
Identity = 57/161 (35.40%), Postives = 90/161 (55.90%), Query Frame = 0


Query: 6   SFSTPQTLPNRLSPHSNLNSLRLFSPPSNLRLNRRVTPPNTSLTLNIQCISQLKA---EV 65
           SFST Q     + P S  + LR     S+L  N RV    + L   + C +Q  A    V
Sbjct: 27  SFSTRQMF--SVLPES--SGLRTRVSLSSLSKNSRV----SRLRRGVICEAQDTATGIPV 86

Query: 66  VTKDSWNKMILESGTLVLVEFYASWCGPCRMVHRVIDELAAEYEGKLKCFVLNTDTDLQI 125
           V   +W+ ++L++   V V+F+A WCGPC+M+  +++ELA +Y G+ K + LNTD     
Sbjct: 87  VNDSTWDSLVLKADEPVFVDFWAPWCGPCKMIDPIVNELAQKYAGQFKFYKLNTDESPAT 146

Query: 126 AEDYEIKAVPVVMLFKDGEKCDSIIGTMPKDFYIAAIERVL 164
              Y ++++P +M+F +GEK D+IIG + KD    +I + L
Sbjct: 147 PGQYGVRSIPTIMIFVNGEKKDTIIGAVSKDTLATSINKFL 179

The following BLAST results are available for this feature:

BLAST of HG10018611 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038887358.1	6.2e-82	92.73	thioredoxin M3, chloroplastic [Benincasa hispida]	[more]
XP_008454954.1	3.8e-79	90.30	PREDICTED: thioredoxin M3, chloroplastic [Cucumis melo] >KAA0031302.1 thioredoxi...	[more]
XP_004136977.1	9.3e-78	89.09	thioredoxin M3, chloroplastic [Cucumis sativus] >KGN43925.1 hypothetical protein...	[more]
KAG6588665.1	3.6e-74	84.85	Thioredoxin M3, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >...	[more]
XP_022927893.1	1.8e-73	84.24	thioredoxin M3, chloroplastic-like [Cucurbita moschata]	[more]

BLAST of HG10018611 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SEU7	2.1e-40	53.22	Thioredoxin M3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GAT1 PE=2 SV=2	[more]
Q7XQQ2	3.4e-30	54.90	Thioredoxin M3, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0...	[more]
Q6H7E4	6.6e-26	47.52	Thioredoxin M1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0...	[more]
Q7X8R5	1.5e-25	37.20	Thioredoxin M2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0...	[more]
P23400	1.5e-25	44.04	Thioredoxin M-type, chloroplastic OS=Chlamydomonas reinhardtii OX=3055 GN=TRXM P...	[more]

BLAST of HG10018611 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C652	1.8e-79	90.30	Thioredoxin M3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G00550 ...	[more]
A0A1S3C0H5	1.8e-79	90.30	thioredoxin M3, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103495242 PE=4 SV=1	[more]
A0A0A0K2M6	4.5e-78	89.09	Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G073610...	[more]
A0A6J1EMB5	8.8e-74	84.24	thioredoxin M3, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111434657...	[more]
A0A6J1JEI0	2.0e-73	84.24	thioredoxin M3, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111486177 P...	[more]

BLAST of HG10018611 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G15570.1	1.5e-41	53.22	Thioredoxin superfamily protein	[more]
AT2G15570.2	2.2e-40	52.91	Thioredoxin superfamily protein	[more]
AT3G15360.1	2.2e-24	37.43	thioredoxin M-type 4	[more]
AT4G03520.1	8.5e-21	31.65	Thioredoxin superfamily protein	[more]
AT1G03680.1	1.9e-20	35.40	thioredoxin M-type 1	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00421	THIOREDOXIN	coord: 127..138 score: 27.78 coord: 79..87 score: 61.79 coord: 87..96 score: 49.78
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 61..165 e-value: 2.5E-28 score: 100.1
None	No IPR available	PANTHER	PTHR45663	GEO12009P1	coord: 30..165
None	No IPR available	PANTHER	PTHR45663:SF21	THIOREDOXIN M3, CHLOROPLASTIC	coord: 30..165
None	No IPR available	CDD	cd02947	TRX_family	coord: 66..160 e-value: 7.56307E-30 score: 102.636
IPR013766	Thioredoxin domain	PFAM	PF00085	Thioredoxin	coord: 61..159 e-value: 1.1E-23 score: 83.2
IPR013766	Thioredoxin domain	PROSITE	PS51352	THIOREDOXIN_2	coord: 39..165 score: 12.601103
IPR017937	Thioredoxin, conserved site	PROSITE	PS00194	THIOREDOXIN_1	coord: 80..98
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 53..163

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10018611.1	HG10018611.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006662	glycerol ether metabolic process
biological_process	GO:0043085	positive regulation of catalytic activity
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0008047	enzyme activator activity
molecular_function	GO:0016671	oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor
molecular_function	GO:0015035	protein-disulfide reductase activity