HG10018593 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10018593
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	AIR carboxylase
Location	Chr04: 5598444 .. 5600143 (+)
RNA-Seq Expression	HG10018593
Synteny	HG10018593

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCTCTGATTCGGATTTTCCTGTAATGAGAGATGCTGCAAAGGTCCTTGACACGTTTGATGTGCCTTATGAGGTTAATTTTTATTTTTGATGATTGATATTTTATGTCCATGATATATAAAGTTTTGGTTAAAATACTATTTTGGTCCCTGTATACATACTAATATGAAATTAAATTCATAGTACAAAGACCAAATGGTACTTCAACATTTTTTTTATGAACGCGGTATGTGTATGTGTGTATATATAATGTCTAACCTGCAAGTTTTTTTCCTTAAAAAAAAAAATGCAGATAAAGATAGTTTCTGCACATCGGACCCCCGATTGGATGTTTTCTTACGCGTCATCCGCTCAGGAGAGAGGGATACAGATTATCATTGCGGGTGCTGGGGGTGCAGCCCATTTACCAGGCTAGTTATTTAAATGCTTCATGTATAAAAGGATAGAACAAAAGATCTCATTCTAAAGGGCTGGTCAAATGGACAAAATGCTCTGATCTACTTGGGTCACTGGCTATTGTATGTTATAAATTCAGGGGATAGTTCTTCATGTGAAATCTGATAAACAAAGAAACGTTGGGGGCTTTATTTATTTATTCTCTCAAAAAGTAGGAAATTTCTCATTAGTGACTGTTAGCTTGAGTTTCAGGTATGGTTGCCTCTCTTACGCCGTTGCCTGTTATCGGCGTCCCTGTGCGTGCTTCAGCATTGGATGGACTTGATTCTCTTCTGTCAATTGTGCAGGTACTCTGTTTTGGGCCTGAAATAATTTTCGTTGCCATTGGTTTGATTAAAACAAATTTATGACGTATAGACATAAATTTTGGTGCATTTTTCAAGATCACTTGATGTGATTTGCGATTTAACATTTCTTCTTCATTTGTCCCATTTTTAAAAGTTGGTCCCTAACCTCTTTCTTGAATGAGACTCAAGTTCTAGCTTTTAAATAAATGTTCTAGTATAAGAGAATATATTGGCTTTGAGATTTATTTAACTTACACATGTTGGATAGAAAATGGGATTGTACTCTGATAGAAGTATCTTCCTAATGACTATCAAGTATTCAAGTGTTATCTTACAATTTACAGCATGACTATTGATTTTTAGTTGGGTTCTAACATATGCTCTACGTAATAACACCATTACTTGCTTTTGGCAATTGTTTGTCCAAATTCTTGGTACCCATTTCACAAGTGTCTTCCCACGCAACACTTATGATTGTGGTAAGAAAACCATCATGGATTGGCCTAGTGGTAAATAAAGGTGCATGATCTTAATAAAAGGCTAAGAGGTCATAGGTTCAATTCATGGTGGCCACCTATTTAAGATTTAATTTCCTACGAGTTTTCTTCACACCCAAATGTTGTGGAGGCAGGTTATTAAGAAAAGAAACAATATGATTATTGTAAGGACTGCTCATGCAGATGCCGAGGGGAGTTCCGGTTGCTACTGTTGCAATCAATAACGCAACCAATGCTGGTTCGTTGGCAGTAAGGATGTTGGGGGTGGCAGATCCGGATCTACTCTCAAGGTGTTGCTCTTATTTGCTTACAAATATATAGTGAATCCCTTACCCAAAAACCATTAATTTGACATGGCACCGTTAATGTGCAGGATGAGCCAATTTCAAGAAGACACCAAGAAAAATGTATTGAGCAAGGCAGAAAAGTTAGAAAAAGATGGTTGGGATCTGCAGTGA

mRNA sequence

ATGGGCTCTGATTCGGATTTTCCTGTAATGAGAGATGCTGCAAAGGTCCTTGACACGTTTGATGTGCCTTATGAGATAAAGATAGTTTCTGCACATCGGACCCCCGATTGGATGTTTTCTTACGCGTCATCCGCTCAGGAGAGAGGGATACAGATTATCATTGCGGGTGCTGGGGGTATGGTTGCCTCTCTTACGCCGTTGCCTGTTATCGGCGTCCCTGTGCGTGCTTCAGCATTGGATGGACTTGATTCTCTTCTGTCAATTGTGCAGATGCCGAGGGGAGTTCCGGTTGCTACTGTTGCAATCAATAACGCAACCAATGCTGGTTCGTTGGCAGTAAGGATGTTGGGGGTGGCAGATCCGGATCTACTCTCAAGGATGAGCCAATTTCAAGAAGACACCAAGAAAAATGTATTGAGCAAGGCAGAAAAGTTAGAAAAAGATGGTTGGGATCTGCAGTGA

Coding sequence (CDS)

ATGGGCTCTGATTCGGATTTTCCTGTAATGAGAGATGCTGCAAAGGTCCTTGACACGTTTGATGTGCCTTATGAGATAAAGATAGTTTCTGCACATCGGACCCCCGATTGGATGTTTTCTTACGCGTCATCCGCTCAGGAGAGAGGGATACAGATTATCATTGCGGGTGCTGGGGGTATGGTTGCCTCTCTTACGCCGTTGCCTGTTATCGGCGTCCCTGTGCGTGCTTCAGCATTGGATGGACTTGATTCTCTTCTGTCAATTGTGCAGATGCCGAGGGGAGTTCCGGTTGCTACTGTTGCAATCAATAACGCAACCAATGCTGGTTCGTTGGCAGTAAGGATGTTGGGGGTGGCAGATCCGGATCTACTCTCAAGGATGAGCCAATTTCAAGAAGACACCAAGAAAAATGTATTGAGCAAGGCAGAAAAGTTAGAAAAAGATGGTTGGGATCTGCAGTGA

Protein sequence

MGSDSDFPVMRDAAKVLDTFDVPYEIKIVSAHRTPDWMFSYASSAQERGIQIIIAGAGGMVASLTPLPVIGVPVRASALDGLDSLLSIVQMPRGVPVATVAINNATNAGSLAVRMLGVADPDLLSRMSQFQEDTKKNVLSKAEKLEKDGWDLQ

Homology

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BLAST of HG10018593 vs. NCBI nr
Match: KAG7033417.1 (Phosphoribosylaminoimidazole carboxylase, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 280.0 bits (715), Expect = 1.2e-71
Identity = 146/153 (95.42%), Postives = 147/153 (96.08%), Query Frame = 0


Query: 1   MGSDSDFPVMRDAAKVLDTFDVPYEIKIVSAHRTPDWMFSYASSAQERGIQIIIAGAGGM 60
           MGSDSDFPVMRDAAKVLDTF  PYEIKIVSAHRTP WMFSYASSAQERGIQIIIAGAGGM
Sbjct: 483 MGSDSDFPVMRDAAKVLDTFGEPYEIKIVSAHRTPHWMFSYASSAQERGIQIIIAGAGGM 542

Query: 61  VASLTPLPVIGVPVRASALDGLDSLLSIVQMPRGVPVATVAINNATNAGSLAVRMLGVAD 120
           VASLTPLPVIGVPVRAS LDG+DSLLSIVQMPRGVPVATVAINNATNAG LAVRMLGVAD
Sbjct: 543 VASLTPLPVIGVPVRASTLDGIDSLLSIVQMPRGVPVATVAINNATNAGLLAVRMLGVAD 602

Query: 121 PDLLSRMSQFQEDTKKNVLSKAEKLEKDGWDLQ 154
            DLLSRMSQFQEDTKKNVLSKAEKLEKDGWDLQ
Sbjct: 603 VDLLSRMSQFQEDTKKNVLSKAEKLEKDGWDLQ 635

[Close]

BLAST of HG10018593 vs. NCBI nr
Match: KAA0037050.1 (phosphoribosylaminoimidazole carboxylase [Cucumis melo var. makuwa] >TYK06601.1 phosphoribosylaminoimidazole carboxylase [Cucumis melo var. makuwa])

HSP 1 Score: 279.6 bits (714), Expect = 1.6e-71
Identity = 148/159 (93.08%), Postives = 150/159 (94.34%), Query Frame = 0


Query: 1   MGSDSDFPVMRDAAKVLDTFDVPYEIKIVSAHRTPDWMFSYASSAQERGIQIIIAGAG-- 60
           MGSDSDFPVMRDAAKVLDTF VPYEIKIVSAHRTPDWMFSYASSAQERGI++IIAGAG  
Sbjct: 428 MGSDSDFPVMRDAAKVLDTFGVPYEIKIVSAHRTPDWMFSYASSAQERGIEVIIAGAGGA 487

Query: 61  ----GMVASLTPLPVIGVPVRASALDGLDSLLSIVQMPRGVPVATVAINNATNAGSLAVR 120
               GMVASLTPLPVIGVPVRASALDGLDSLLSIVQMPRGVPVATVAINNATNAG LAVR
Sbjct: 488 AHLPGMVASLTPLPVIGVPVRASALDGLDSLLSIVQMPRGVPVATVAINNATNAGLLAVR 547

Query: 121 MLGVADPDLLSRMSQFQEDTKKNVLSKAEKLEKDGWDLQ 154
           MLGVAD DLLSRMSQFQEDTKKNVLSKAEKLEKDGWDLQ
Sbjct: 548 MLGVADADLLSRMSQFQEDTKKNVLSKAEKLEKDGWDLQ 586

[Close]

BLAST of HG10018593 vs. NCBI nr
Match: XP_008441168.1 (PREDICTED: phosphoribosylaminoimidazole carboxylase, chloroplastic isoform X1 [Cucumis melo])

HSP 1 Score: 279.6 bits (714), Expect = 1.6e-71
Identity = 148/159 (93.08%), Postives = 150/159 (94.34%), Query Frame = 0


Query: 1   MGSDSDFPVMRDAAKVLDTFDVPYEIKIVSAHRTPDWMFSYASSAQERGIQIIIAGAG-- 60
           MGSDSDFPVMRDAAKVLDTF VPYEIKIVSAHRTPDWMFSYASSAQERGI++IIAGAG  
Sbjct: 483 MGSDSDFPVMRDAAKVLDTFGVPYEIKIVSAHRTPDWMFSYASSAQERGIEVIIAGAGGA 542

Query: 61  ----GMVASLTPLPVIGVPVRASALDGLDSLLSIVQMPRGVPVATVAINNATNAGSLAVR 120
               GMVASLTPLPVIGVPVRASALDGLDSLLSIVQMPRGVPVATVAINNATNAG LAVR
Sbjct: 543 AHLPGMVASLTPLPVIGVPVRASALDGLDSLLSIVQMPRGVPVATVAINNATNAGLLAVR 602

Query: 121 MLGVADPDLLSRMSQFQEDTKKNVLSKAEKLEKDGWDLQ 154
           MLGVAD DLLSRMSQFQEDTKKNVLSKAEKLEKDGWDLQ
Sbjct: 603 MLGVADADLLSRMSQFQEDTKKNVLSKAEKLEKDGWDLQ 641

[Close]

BLAST of HG10018593 vs. NCBI nr
Match: XP_016899416.1 (PREDICTED: phosphoribosylaminoimidazole carboxylase, chloroplastic isoform X2 [Cucumis melo])

HSP 1 Score: 279.6 bits (714), Expect = 1.6e-71
Identity = 148/159 (93.08%), Postives = 150/159 (94.34%), Query Frame = 0


Query: 1   MGSDSDFPVMRDAAKVLDTFDVPYEIKIVSAHRTPDWMFSYASSAQERGIQIIIAGAG-- 60
           MGSDSDFPVMRDAAKVLDTF VPYEIKIVSAHRTPDWMFSYASSAQERGI++IIAGAG  
Sbjct: 256 MGSDSDFPVMRDAAKVLDTFGVPYEIKIVSAHRTPDWMFSYASSAQERGIEVIIAGAGGA 315

Query: 61  ----GMVASLTPLPVIGVPVRASALDGLDSLLSIVQMPRGVPVATVAINNATNAGSLAVR 120
               GMVASLTPLPVIGVPVRASALDGLDSLLSIVQMPRGVPVATVAINNATNAG LAVR
Sbjct: 316 AHLPGMVASLTPLPVIGVPVRASALDGLDSLLSIVQMPRGVPVATVAINNATNAGLLAVR 375

Query: 121 MLGVADPDLLSRMSQFQEDTKKNVLSKAEKLEKDGWDLQ 154
           MLGVAD DLLSRMSQFQEDTKKNVLSKAEKLEKDGWDLQ
Sbjct: 376 MLGVADADLLSRMSQFQEDTKKNVLSKAEKLEKDGWDLQ 414

[Close]

BLAST of HG10018593 vs. NCBI nr
Match: XP_016899417.1 (PREDICTED: phosphoribosylaminoimidazole carboxylase, chloroplastic isoform X4 [Cucumis melo])

HSP 1 Score: 279.6 bits (714), Expect = 1.6e-71
Identity = 148/159 (93.08%), Postives = 150/159 (94.34%), Query Frame = 0


Query: 1   MGSDSDFPVMRDAAKVLDTFDVPYEIKIVSAHRTPDWMFSYASSAQERGIQIIIAGAG-- 60
           MGSDSDFPVMRDAAKVLDTF VPYEIKIVSAHRTPDWMFSYASSAQERGI++IIAGAG  
Sbjct: 227 MGSDSDFPVMRDAAKVLDTFGVPYEIKIVSAHRTPDWMFSYASSAQERGIEVIIAGAGGA 286

Query: 61  ----GMVASLTPLPVIGVPVRASALDGLDSLLSIVQMPRGVPVATVAINNATNAGSLAVR 120
               GMVASLTPLPVIGVPVRASALDGLDSLLSIVQMPRGVPVATVAINNATNAG LAVR
Sbjct: 287 AHLPGMVASLTPLPVIGVPVRASALDGLDSLLSIVQMPRGVPVATVAINNATNAGLLAVR 346

Query: 121 MLGVADPDLLSRMSQFQEDTKKNVLSKAEKLEKDGWDLQ 154
           MLGVAD DLLSRMSQFQEDTKKNVLSKAEKLEKDGWDLQ
Sbjct: 347 MLGVADADLLSRMSQFQEDTKKNVLSKAEKLEKDGWDLQ 385

[Close]

BLAST of HG10018593 vs. ExPASy Swiss-Prot
Match: P55195 (Phosphoribosylaminoimidazole carboxylase, chloroplastic (Fragment) OS=Vigna aconitifolia OX=3918 GN=PURKE PE=2 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 1.3e-57
Identity = 116/157 (73.89%), Postives = 135/157 (85.99%), Query Frame = 0


Query: 1   MGSDSDFPVMRDAAKVLDTFDVPYEIKIVSAHRTPDWMFSYASSAQERGIQIIIAGAG-- 60
           MGSDSD PVM+ AA++++ F VP+E++IVSAHRTP+ MF YASSA ERG Q+IIAGAG  
Sbjct: 395 MGSDSDLPVMKSAAEMMEMFGVPHEVRIVSAHRTPELMFCYASSAHERGYQVIIAGAGGA 454

Query: 61  ----GMVASLTPLPVIGVPVRASALDGLDSLLSIVQMPRGVPVATVAINNATNAGSLAVR 120
               GMVASLTPLPV+GVPVRAS LDGLDSLLSIVQMPRGVPVATVA+NNATNAG LAVR
Sbjct: 455 AHLPGMVASLTPLPVVGVPVRASTLDGLDSLLSIVQMPRGVPVATVAVNNATNAGLLAVR 514

Query: 121 MLGVADPDLLSRMSQFQEDTKKNVLSKAEKLEKDGWD 152
           MLGVA+ +LLSRMSQ+QED K+ VL + +KLEK GW+
Sbjct: 515 MLGVANDNLLSRMSQYQEDQKEAVLREGDKLEKHGWE 551

[Close]

BLAST of HG10018593 vs. ExPASy Swiss-Prot
Match: P15567 (Phosphoribosylaminoimidazole carboxylase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=ade6 PE=3 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 4.8e-47
Identity = 100/156 (64.10%), Postives = 119/156 (76.28%), Query Frame = 0


Query: 1   MGSDSDFPVMRDAAKVLDTFDVPYEIKIVSAHRTPDWMFSYASSAQERGIQIIIAGAG-- 60
           MGSDSD   M+DAA +LD F VPYE+ IVSAHRTPD M +YA +A  RG+++IIAGAG  
Sbjct: 392 MGSDSDLSKMKDAAVILDEFKVPYELTIVSAHRTPDRMVTYARTAASRGLRVIIAGAGGA 451

Query: 61  ----GMVASLTPLPVIGVPVRASALDGLDSLLSIVQMPRGVPVATVAINNATNAGSLAVR 120
               GMVA++TPLPVIGVPV+ S LDG+DSL SIVQMPRGVPVATVAINN+ NAG LA R
Sbjct: 452 AHLPGMVAAMTPLPVIGVPVKGSTLDGVDSLHSIVQMPRGVPVATVAINNSQNAGILACR 511

Query: 121 MLGVADPDLLSRMSQFQEDTKKNVLSKAEKLEKDGW 151
           +L    P LL+ M  F ++ K+ VL KA+KLEK GW
Sbjct: 512 ILATFQPSLLAAMESFMDNMKEIVLEKADKLEKVGW 547

[Close]

BLAST of HG10018593 vs. ExPASy Swiss-Prot
Match: Q9WYS7 (N5-carboxyaminoimidazole ribonucleotide mutase OS=Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) OX=243274 GN=purE PE=1 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 5.3e-46
Identity = 96/156 (61.54%), Postives = 122/156 (78.21%), Query Frame = 0


Query: 1   MGSDSDFPVMRDAAKVLDTFDVPYEIKIVSAHRTPDWMFSYASSAQERGIQIIIAGAG-- 60
           MGSDSD PVM+ AA++L+ F + YEI IVSAHRTPD MF YA +A+ERGI++IIAGAG  
Sbjct: 8   MGSDSDLPVMKQAAEILEEFGIDYEITIVSAHRTPDRMFEYAKNAEERGIEVIIAGAGGA 67

Query: 61  ----GMVASLTPLPVIGVPVRASALDGLDSLLSIVQMPRGVPVATVAINNATNAGSLAVR 120
               GMVAS+T LPVIGVPV+ S L+GLDSL SIVQMP GVPVATVAINNA NAG LA  
Sbjct: 68  AHLPGMVASITHLPVIGVPVKTSTLNGLDSLFSIVQMPGGVPVATVAINNAKNAGILAAS 127

Query: 121 MLGVADPDLLSRMSQFQEDTKKNVLSKAEKLEKDGW 151
           +LG+  P++  ++ +++E  K+ VL KA++LE+ G+
Sbjct: 128 ILGIKYPEIARKVKEYKERMKREVLEKAQRLEQIGY 163

[Close]

BLAST of HG10018593 vs. ExPASy Swiss-Prot
Match: O58058 (N5-carboxyaminoimidazole ribonucleotide mutase OS=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) OX=70601 GN=purE PE=3 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 6.9e-46
Identity = 91/157 (57.96%), Postives = 125/157 (79.62%), Query Frame = 0


Query: 1   MGSDSDFPVMRDAAKVLDTFDVPYEIKIVSAHRTPDWMFSYASSAQERGIQIIIAGAG-- 60
           MGSDSD PVM++AA++L+ F VPYEI I+SAHRTP+  + YA  A+ERGI++IIAGAG  
Sbjct: 16  MGSDSDLPVMKEAARILEEFGVPYEITIISAHRTPERAYEYAKKAEERGIEVIIAGAGGA 75

Query: 61  ----GMVASLTPLPVIGVPVRASALDGLDSLLSIVQMPRGVPVATVAINNATNAGSLAVR 120
               G++ASLT LPVIGVP+++ AL+GLDSLLSIVQMP G+PVATVAI+NA NA  LA+R
Sbjct: 76  AHLPGIIASLTVLPVIGVPIKSKALNGLDSLLSIVQMPSGIPVATVAIDNAKNAALLALR 135

Query: 121 MLGVADPDLLSRMSQFQEDTKKNVLSKAEKLEKDGWD 152
           +LG+  P++  ++ ++ +D K+ V  KA++LE+ GW+
Sbjct: 136 ILGIKYPEIKEKLRRYMKDMKRKVEEKAKRLEEMGWE 172

[Close]

BLAST of HG10018593 vs. ExPASy Swiss-Prot
Match: O74197 (Phosphoribosylaminoimidazole carboxylase OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) OX=284593 GN=ADE2 PE=3 SV=2)

HSP 1 Score: 183.0 bits (463), Expect = 2.6e-45
Identity = 98/157 (62.42%), Postives = 120/157 (76.43%), Query Frame = 0


Query: 1   MGSDSDFPVMRDAAKVLDTFDVPYEIKIVSAHRTPDWMFSYASSAQERGIQIIIAGAG-- 60
           MGSDSD PVM  A K+L+ F+VP+E+ IVSAHRTP  M  YAS A  RGI++IIAGAG  
Sbjct: 408 MGSDSDLPVMSAACKMLEQFEVPFEVTIVSAHRTPYRMNKYASEAVSRGIKVIIAGAGGA 467

Query: 61  ----GMVASLTPLPVIGVPVRASALDGLDSLLSIVQMPRGVPVATVAINNATNAGSLAVR 120
               GMVA++TP+PVIGVPV+ S LDG+DSL SIVQMPRGVPVATVAINN+TNAG LAVR
Sbjct: 468 AHLPGMVAAMTPVPVIGVPVKGSTLDGVDSLHSIVQMPRGVPVATVAINNSTNAGILAVR 527

Query: 121 MLGVADPDLLSRMSQFQEDTKKNVLSKAEKLEKDGWD 152
           MLG+ + D + +M +F    ++ VL KA KLE  G++
Sbjct: 528 MLGIHNYDYVKKMEEFLNKQEEEVLQKAAKLESIGYE 564

[Close]

BLAST of HG10018593 vs. ExPASy TrEMBL
Match: A0A5D3C3X4 (AIR carboxylase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold453G00690 PE=3 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 7.6e-72
Identity = 148/159 (93.08%), Postives = 150/159 (94.34%), Query Frame = 0


Query: 1   MGSDSDFPVMRDAAKVLDTFDVPYEIKIVSAHRTPDWMFSYASSAQERGIQIIIAGAG-- 60
           MGSDSDFPVMRDAAKVLDTF VPYEIKIVSAHRTPDWMFSYASSAQERGI++IIAGAG  
Sbjct: 428 MGSDSDFPVMRDAAKVLDTFGVPYEIKIVSAHRTPDWMFSYASSAQERGIEVIIAGAGGA 487

Query: 61  ----GMVASLTPLPVIGVPVRASALDGLDSLLSIVQMPRGVPVATVAINNATNAGSLAVR 120
               GMVASLTPLPVIGVPVRASALDGLDSLLSIVQMPRGVPVATVAINNATNAG LAVR
Sbjct: 488 AHLPGMVASLTPLPVIGVPVRASALDGLDSLLSIVQMPRGVPVATVAINNATNAGLLAVR 547

Query: 121 MLGVADPDLLSRMSQFQEDTKKNVLSKAEKLEKDGWDLQ 154
           MLGVAD DLLSRMSQFQEDTKKNVLSKAEKLEKDGWDLQ
Sbjct: 548 MLGVADADLLSRMSQFQEDTKKNVLSKAEKLEKDGWDLQ 586

[Close]

BLAST of HG10018593 vs. ExPASy TrEMBL
Match: A0A1S4DTU8 (AIR carboxylase OS=Cucumis melo OX=3656 GN=LOC103485386 PE=3 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 7.6e-72
Identity = 148/159 (93.08%), Postives = 150/159 (94.34%), Query Frame = 0


Query: 1   MGSDSDFPVMRDAAKVLDTFDVPYEIKIVSAHRTPDWMFSYASSAQERGIQIIIAGAG-- 60
           MGSDSDFPVMRDAAKVLDTF VPYEIKIVSAHRTPDWMFSYASSAQERGI++IIAGAG  
Sbjct: 256 MGSDSDFPVMRDAAKVLDTFGVPYEIKIVSAHRTPDWMFSYASSAQERGIEVIIAGAGGA 315

Query: 61  ----GMVASLTPLPVIGVPVRASALDGLDSLLSIVQMPRGVPVATVAINNATNAGSLAVR 120
               GMVASLTPLPVIGVPVRASALDGLDSLLSIVQMPRGVPVATVAINNATNAG LAVR
Sbjct: 316 AHLPGMVASLTPLPVIGVPVRASALDGLDSLLSIVQMPRGVPVATVAINNATNAGLLAVR 375

Query: 121 MLGVADPDLLSRMSQFQEDTKKNVLSKAEKLEKDGWDLQ 154
           MLGVAD DLLSRMSQFQEDTKKNVLSKAEKLEKDGWDLQ
Sbjct: 376 MLGVADADLLSRMSQFQEDTKKNVLSKAEKLEKDGWDLQ 414

[Close]

BLAST of HG10018593 vs. ExPASy TrEMBL
Match: A0A1S3B3J7 (AIR carboxylase OS=Cucumis melo OX=3656 GN=LOC103485386 PE=3 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 7.6e-72
Identity = 148/159 (93.08%), Postives = 150/159 (94.34%), Query Frame = 0


Query: 1   MGSDSDFPVMRDAAKVLDTFDVPYEIKIVSAHRTPDWMFSYASSAQERGIQIIIAGAG-- 60
           MGSDSDFPVMRDAAKVLDTF VPYEIKIVSAHRTPDWMFSYASSAQERGI++IIAGAG  
Sbjct: 248 MGSDSDFPVMRDAAKVLDTFGVPYEIKIVSAHRTPDWMFSYASSAQERGIEVIIAGAGGA 307

Query: 61  ----GMVASLTPLPVIGVPVRASALDGLDSLLSIVQMPRGVPVATVAINNATNAGSLAVR 120
               GMVASLTPLPVIGVPVRASALDGLDSLLSIVQMPRGVPVATVAINNATNAG LAVR
Sbjct: 308 AHLPGMVASLTPLPVIGVPVRASALDGLDSLLSIVQMPRGVPVATVAINNATNAGLLAVR 367

Query: 121 MLGVADPDLLSRMSQFQEDTKKNVLSKAEKLEKDGWDLQ 154
           MLGVAD DLLSRMSQFQEDTKKNVLSKAEKLEKDGWDLQ
Sbjct: 368 MLGVADADLLSRMSQFQEDTKKNVLSKAEKLEKDGWDLQ 406

[Close]

BLAST of HG10018593 vs. ExPASy TrEMBL
Match: A0A1S3B3F9 (AIR carboxylase OS=Cucumis melo OX=3656 GN=LOC103485386 PE=3 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 7.6e-72
Identity = 148/159 (93.08%), Postives = 150/159 (94.34%), Query Frame = 0


Query: 1   MGSDSDFPVMRDAAKVLDTFDVPYEIKIVSAHRTPDWMFSYASSAQERGIQIIIAGAG-- 60
           MGSDSDFPVMRDAAKVLDTF VPYEIKIVSAHRTPDWMFSYASSAQERGI++IIAGAG  
Sbjct: 483 MGSDSDFPVMRDAAKVLDTFGVPYEIKIVSAHRTPDWMFSYASSAQERGIEVIIAGAGGA 542

Query: 61  ----GMVASLTPLPVIGVPVRASALDGLDSLLSIVQMPRGVPVATVAINNATNAGSLAVR 120
               GMVASLTPLPVIGVPVRASALDGLDSLLSIVQMPRGVPVATVAINNATNAG LAVR
Sbjct: 543 AHLPGMVASLTPLPVIGVPVRASALDGLDSLLSIVQMPRGVPVATVAINNATNAGLLAVR 602

Query: 121 MLGVADPDLLSRMSQFQEDTKKNVLSKAEKLEKDGWDLQ 154
           MLGVAD DLLSRMSQFQEDTKKNVLSKAEKLEKDGWDLQ
Sbjct: 603 MLGVADADLLSRMSQFQEDTKKNVLSKAEKLEKDGWDLQ 641

[Close]

BLAST of HG10018593 vs. ExPASy TrEMBL
Match: A0A1S4DTU3 (AIR carboxylase OS=Cucumis melo OX=3656 GN=LOC103485386 PE=3 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 7.6e-72
Identity = 148/159 (93.08%), Postives = 150/159 (94.34%), Query Frame = 0


Query: 1   MGSDSDFPVMRDAAKVLDTFDVPYEIKIVSAHRTPDWMFSYASSAQERGIQIIIAGAG-- 60
           MGSDSDFPVMRDAAKVLDTF VPYEIKIVSAHRTPDWMFSYASSAQERGI++IIAGAG  
Sbjct: 227 MGSDSDFPVMRDAAKVLDTFGVPYEIKIVSAHRTPDWMFSYASSAQERGIEVIIAGAGGA 286

Query: 61  ----GMVASLTPLPVIGVPVRASALDGLDSLLSIVQMPRGVPVATVAINNATNAGSLAVR 120
               GMVASLTPLPVIGVPVRASALDGLDSLLSIVQMPRGVPVATVAINNATNAG LAVR
Sbjct: 287 AHLPGMVASLTPLPVIGVPVRASALDGLDSLLSIVQMPRGVPVATVAINNATNAGLLAVR 346

Query: 121 MLGVADPDLLSRMSQFQEDTKKNVLSKAEKLEKDGWDLQ 154
           MLGVAD DLLSRMSQFQEDTKKNVLSKAEKLEKDGWDLQ
Sbjct: 347 MLGVADADLLSRMSQFQEDTKKNVLSKAEKLEKDGWDLQ 385

[Close]

BLAST of HG10018593 vs. TAIR 10
Match: AT2G37690.1 (phosphoribosylaminoimidazole carboxylase, putative / AIR carboxylase, putative )

HSP 1 Score: 219.5 bits (558), Expect = 1.8e-57
Identity = 112/157 (71.34%), Postives = 133/157 (84.71%), Query Frame = 0


Query: 1   MGSDSDFPVMRDAAKVLDTFDVPYEIKIVSAHRTPDWMFSYASSAQERGIQIIIAGAG-- 60
           MGSD+D PVM+DAAK+LD F V +E+KIVSAHRTP+ M++YA+SA  RG+Q+IIAGAG  
Sbjct: 481 MGSDTDLPVMKDAAKILDLFGVTHEVKIVSAHRTPEMMYTYATSAHSRGVQVIIAGAGGA 540

Query: 61  ----GMVASLTPLPVIGVPVRASALDGLDSLLSIVQMPRGVPVATVAINNATNAGSLAVR 120
               GMVASLTPLPVIGVPVRA+ LDG+DSLLSIVQMPRGVPVATVAINNATNA  LAVR
Sbjct: 541 AHLPGMVASLTPLPVIGVPVRATRLDGVDSLLSIVQMPRGVPVATVAINNATNAALLAVR 600

Query: 121 MLGVADPDLLSRMSQFQEDTKKNVLSKAEKLEKDGWD 152
           MLG++D DL+SRM Q+QED +   L+K EKLE +GW+
Sbjct: 601 MLGISDTDLVSRMRQYQEDMRDENLNKGEKLETEGWE 637

[Close]

BLAST of HG10018593 vs. TAIR 10
Match: AT2G05140.1 (phosphoribosylaminoimidazole carboxylase family protein / AIR carboxylase family protein )

HSP 1 Score: 213.0 bits (541), Expect = 1.7e-55
Identity = 110/157 (70.06%), Postives = 131/157 (83.44%), Query Frame = 0


Query: 1   MGSDSDFPVMRDAAKVLDTFDVPYEIKIVSAHRTPDWMFSYASSAQERGIQIIIAGAG-- 60
           MGSD+D  VM+DAAK+LD F V +E+KIVSAHRTP+ M++YA+SA  RG+Q+IIAGAG  
Sbjct: 1   MGSDTDLLVMKDAAKILDMFGVTHEVKIVSAHRTPEMMYTYATSAHSRGVQVIIAGAGGA 60

Query: 61  ----GMVASLTPLPVIGVPVRASALDGLDSLLSIVQMPRGVPVATVAINNATNAGSLAVR 120
               GMVASLTPLPVIGVPV+A+ LDG+DSLLSIVQMPRGVPVATVAINNATNA  LAVR
Sbjct: 61  AHLPGMVASLTPLPVIGVPVQATRLDGVDSLLSIVQMPRGVPVATVAINNATNAALLAVR 120

Query: 121 MLGVADPDLLSRMSQFQEDTKKNVLSKAEKLEKDGWD 152
           MLG++D DL+SRM Q+QED +   L+K EKLE  GW+
Sbjct: 121 MLGISDNDLVSRMRQYQEDMRDENLNKGEKLETQGWE 157

The following BLAST results are available for this feature:

BLAST of HG10018593 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7033417.1	1.2e-71	95.42	Phosphoribosylaminoimidazole carboxylase, chloroplastic, partial [Cucurbita argy...	[more]
KAA0037050.1	1.6e-71	93.08	phosphoribosylaminoimidazole carboxylase [Cucumis melo var. makuwa] >TYK06601.1 ...	[more]
XP_008441168.1	1.6e-71	93.08	PREDICTED: phosphoribosylaminoimidazole carboxylase, chloroplastic isoform X1 [C...	[more]
XP_016899416.1	1.6e-71	93.08	PREDICTED: phosphoribosylaminoimidazole carboxylase, chloroplastic isoform X2 [C...	[more]
XP_016899417.1	1.6e-71	93.08	PREDICTED: phosphoribosylaminoimidazole carboxylase, chloroplastic isoform X4 [C...	[more]

BLAST of HG10018593 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P55195	1.3e-57	73.89	Phosphoribosylaminoimidazole carboxylase, chloroplastic (Fragment) OS=Vigna acon...	[more]
P15567	4.8e-47	64.10	Phosphoribosylaminoimidazole carboxylase OS=Schizosaccharomyces pombe (strain 97...	[more]
Q9WYS7	5.3e-46	61.54	N5-carboxyaminoimidazole ribonucleotide mutase OS=Thermotoga maritima (strain AT...	[more]
O58058	6.9e-46	57.96	N5-carboxyaminoimidazole ribonucleotide mutase OS=Pyrococcus horikoshii (strain ...	[more]
O74197	2.6e-45	62.42	Phosphoribosylaminoimidazole carboxylase OS=Candida glabrata (strain ATCC 2001 /...	[more]

BLAST of HG10018593 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C3X4	7.6e-72	93.08	AIR carboxylase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold453G0069...	[more]
A0A1S4DTU8	7.6e-72	93.08	AIR carboxylase OS=Cucumis melo OX=3656 GN=LOC103485386 PE=3 SV=1	[more]
A0A1S3B3J7	7.6e-72	93.08	AIR carboxylase OS=Cucumis melo OX=3656 GN=LOC103485386 PE=3 SV=1	[more]
A0A1S3B3F9	7.6e-72	93.08	AIR carboxylase OS=Cucumis melo OX=3656 GN=LOC103485386 PE=3 SV=1	[more]
A0A1S4DTU3	7.6e-72	93.08	AIR carboxylase OS=Cucumis melo OX=3656 GN=LOC103485386 PE=3 SV=1	[more]

BLAST of HG10018593 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G37690.1	1.8e-57	71.34	phosphoribosylaminoimidazole carboxylase, putative / AIR carboxylase, putative	[more]
AT2G05140.1	1.7e-55	70.06	phosphoribosylaminoimidazole carboxylase family protein / AIR carboxylase family...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000031	PurE domain	SMART	SM01001	AIRC_2	coord: 1..138 e-value: 1.0E-77 score: 274.2
IPR000031	PurE domain	PFAM	PF00731	AIRC	coord: 1..136 e-value: 4.2E-55 score: 185.4
IPR000031	PurE domain	TIGRFAM	TIGR01162	TIGR01162	coord: 1..145 e-value: 4.5E-58 score: 193.1
IPR024694	PurE, prokaryotic type	PIRSF	PIRSF001338	AIR_carboxylase	coord: 1..149 e-value: 1.6E-58 score: 194.6
None	No IPR available	GENE3D	3.40.50.1970		coord: 1..152 e-value: 6.9E-64 score: 216.5
None	No IPR available	PANTHER	PTHR11609	PURINE BIOSYNTHESIS PROTEIN 6/7, PUR6/7	coord: 1..151
None	No IPR available	PANTHER	PTHR11609:SF13	BNAA03G17360D PROTEIN	coord: 1..151
None	No IPR available	SUPERFAMILY	52255	N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)	coord: 1..149
IPR033747	Class I PurE	HAMAP	MF_01929	PurE_classI	coord: 1..142 score: 25.989262

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10018593.1	HG10018593.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006189	'de novo' IMP biosynthetic process
molecular_function	GO:0043727	5-amino-4-imidazole carboxylate lyase activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0004638	phosphoribosylaminoimidazole carboxylase activity