HG10018477 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10018477
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	COP9 signalosome complex subunit 3
Location	Chr04: 4558645 .. 4566782 (-)
RNA-Seq Expression	HG10018477
Synteny	HG10018477

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACGCTTTGGAATTGGAAGCTCACCTTGTTGGGCCGGACATAGGAGAGAGTCCAGAAGGTGCAGTTGGGCCGTATGACATTGGGTTCAATCCATTCTTCCAGCGATCTGGTATTCACCGCTCGGATTCCGACTTGACAAGAAAGAAAGGAGTGATCGATCGAATAGAAGCTTCATTTCAATTTCTTCTCTCAAAGATATTCCTCCTGCTCCTGCTCCTGCTCCTGCAGGTGCTAAAGCCTGAGCCACTGTTTACCCTCACCATGGGCACGGTTGAAGTTCTTGTGGCACAAATCCAAGGGTTGTCCAGTACCGCCGGTGATATCTCTCGCCTCCACACTCTTCTCAAGCAATCAGAAGAACTACTCCACGCCGAAACCTCTCATTTACCTTCCACATTAGCTCAACTTGATGCTTCCAAACATTCTTTAGGATATCTCTACATTCTGTAAGTTTTTCTTCTCTGAATTATTAGGGCCCGCCTACCCTGTATGTTACACTACTATTGAGGATTCCTTCCTATCAGTGAGTGCTTTTGTTGAACCATCATTTCTTTTGGTAAAAGTTTGAAGGGATGCACTCCAAGAATTGATGTTTGTATCGGGGGTCCAACGATGGGATCGTACCCATCATGGATACGCCCTCTAACTATTCTAGTTATTTAAAACTGCGTTGCTTTGATTTTGAGTATGTGGTTACTGAATATGTATGCAGAGGAGATTTATCCATAATATTTCCTTTAAATATATTCGCAGAGAGGCATGCACATCTGTACCAATTTCACAAGAGCAAACCAGTTCAATTGTTCTAACTATTTCAAGATTTATCTCTTCTTGCAACCCTGAGCAGATTCGTTTAGCACCTGAAAAATGTAAATCTTTGTGAAAACTGACCCTTATTATTATTAACATGTGTGATTGCTGCTATCTGGAATCTTGACCATCTATTGTCATATTCTGCTGATCGTGCAGTCGTCTCTGTTTGCAAGAGGTTGAAAGATCAAGTTATACTAGAGGCTCCAATTAGAGGGGTGGCTCCACTTCTTACAGCTATTAGAAAACTCCAGACCTCTTCAGAACATTTAACCACTTTGCATCCGGAGTTTCTTCTTCTCTGCTTATTAGCCAAATGCTACAAAGCTGGCAGATCCATATTGGATAATGATATTCTCGAGGTTGATCAACCAAGAGACCTGTTTCTTTATTGTTATTACGGGTCAGTTGCTTTTCTTCTTCATACGCTCAATTGTTGTACTTTCCTTCTTTGGTTGAGATGCATTTTATTATCTTCATATTCGTTGTCAACTTTATTATTCCTTTCAATATTTTTCCTCAAAGTTCTATACATATTTTATTAAATTTTGCAAATGCTATATTTTCTTTCTTACCCTCCCCCCACCCCCTCGTGTATGTTGATTATTGTCGTCGTTGAGAATGTTTATGATGCATCTAAAATATGATAAGTGGTCAATAATTTAGGGTGAAAAGGCCTTTTCATTGCTTCCAGCTGGAGTTCGGCTGCTTTTCTTGCAAAAATTATGATGTTAAGAAATTTTACGTCGCACGTGAGATATATTATGTATTGAATCTAGTTCTCTCTCTCTCTCAGTTTTTTTTTCCTCCCCTTCGTCCCTATTAGGCTAATGAGTTTGCTACCGTCTAGTAAGGCTTTTCTATTGATCCCTTTTTGTAGCTCTACTGCTTTGAGGTAGCATCATATTTACTCTTTGTTGCCTTTGATACAGTTTGTGTGCAACTTGACTAATTCTAGAGGAAAACCTTTTCACCTTGCAACATTGGTGTCTTAAAACTTGTAAGATACGTAATAGGTGGCACTATAGTTTGAACCCATGACCTTGAAGGCATCTTGGTTTATAGCTTGCTCTTTTGGCCATTAAGCTAACTAGAGGTGTCTGTGTGTGTAGGGAAATGTTGGAATTCCTCTCCCTTTTGTTGGATAAGTTAAGGAGAGTGGTGTTTAGTTTTAAGGGGGAAGGCGTTCGAGACACAATTAAGGAGGACTTGGCCAAGGTTTCTAATGAGCTTTATGACTGTTATTATTGATGTGGCTATGAATGAGACCAGAGACCTACATCTATTTGCCTTTTAGGAAGGATAATACATGATAGTGAAAAATTTAAAACCCATCAGCTGGGTAACTAACTTGTATAAAATTAATGTTGAAGTCTTGGTTGATGAGGATTATAAGAAGTTGGACTTGTACGAAGGAAGGGTTTGTCTATGATTTATTTTAAGAAGCCTTATTATCGTGCTAATTGGGTTTTGTGGACAAAGTTTTGTGAAAAGGCGTAGTGGGGCTGGTTTGGTGGGGATCCTTATGTGGAGCTATCTTCCATCGGTAGACTTCTCTTGGTGGTTAATAAGCTAAAGATTAAAAGCTTTACCACTAAGAAAATTAGGTAGGGTGATCCTTTGTCATGGTTATTGGGAGGCCTTTTTGTAAAACTTTGATGTGGTGGGGATAACCATCTTCGTTTCTTATAAAAAAAACTCTCAGTCACCGTTCCTTCTCCTCATGGTGGTTGATATTCTTGACAGGTTATCAACTTATCTTCTAGAGAGATGGATAAGCACTTAGTTAAAAGTTTCATGTTGTGCTGCTTTTGTTTTTTGGTCCAGTCTGCATTGATTGAATCTCATCTTTTTTGGATTGTTTTGTATCTTTTAACTATCCTTTCCTTGTAAATCCTTGATTGTATTTGGGTGATTTTCCTTTTGGGTTTATCCCTTTTGTACTCTTTGGATAATTTCATACATCAATGAAATTGTTTCTTATCCTAAAAAAAGGTTTTATGTTGGAAAGGATAAGGTTCACCATATCCACCTCCAATTTTCTAATCATGTTGTGTTTTTCAATTTTAAGATGGATTTTTTGTTTTTTTGTTTTTGTTTTTGTTTTGTTTTGATTTGTTTTGTTTTGCTAAGAATGATAAGATTATTTTTAACTCAAACAAATTCCTAATGTTTTAGTTCATAGGCTATGATCAATTCAAAGAAGTGTCTTGTGCTTGACATTACTAGTAACACTTTCACTATGTTGGTGAGGCATGATGGTTTTTTCATTGTTTTCTACTTAGGTCTCTTGTTATGTCGTAATCTTAGGCCAATTGCATTTTGGGACTCCATCATGATTATGGTTAAAAAAATATCTCTTCTTATAGGAAGGCTAACTTTTTGTTTGATTTGTTTTAAAAGTAGGATCTCTTTTAAGAGTAGGATCTCTTTATGTCCCTTGAAAGGGTGGAGAAAATTATATCTCAAAGTCTAGTGAGGTGAGGAGAATAGGTTGAGGACATGGAATTTTTTACTCTTGTGGGTGAGTGGTTATCGTAGTTTCAGTTAGAGCTTTGGTACTTTGTGGTATAATGCTTAAGCAAGTAAGGAAATATAGGTGACATCTTGCTAAGTGGAATGGAACACATCTATAGCGACCAAAAGTGGAATGGTCGGTTTAATGGTATGTGCAAAACTGACTTATACCAATAAACCGACCGACTGAAATCGATTTAGTCGGTTGGCTCGGTTTTTTCGGTTCATGATGCTCACCCCTTAGAACTCAAACACACAGTTGTACAACCTATAGAGCAAATCCTGTTCAAGTAAGGTCCTACATGATGCTCACCCCTAATAGCAACATTCATTGCCTTAGTGCTCTATATTTTGGAGTTCTACTCCAAAACACACTGTTTTCACTTTAAGAGGCTGTCCTATGTCCATTTTTTAAATAAATAAAAAATGAATTTATTATTATTATAATAATAATTATATATATATATATAGAAGCTCGCGATATCCTCTCTACTTCCCATTTGCAGGATTTTCCATCTTTGCTCAATGTACAAAGATTTTCATGTTTGGACCGCAAATCTTGGGGGTGCTTCACGTCAATCTTTTCTCATTGATTGCTCTTCCTTTTCATAGATTTCCCTTTTGTATCCTAAGCTTTGCATGTTCAAGTTTTCCTAAAATCTTGAAAATTTACATGTTTGGTAGCTTATAGGATGATTAACACCACTATTTTTGTCCATGGTTTTGGTTCTTTAGAAGTATTGCCCTTTGTAAATGCACATTAGAGGACTTGGATCATATCTCGCGGATATGAATTTACTATGGCTACGTGGAATTGATTGCTGGTCACTTTGGGGTGTTAGGTTGGCCCTAAATTGGAAATGTCTTTCAGGACAACGAATGGGCTTTTCATGAGTTGATTTTGTGGAGTATTTAATTAGAGAGATGGAGAAGAACTTTTTTAAGGGTGTAAAGGAGTATTAGGAGGAATGGAATGGGCTATTTCAAATCTTCCCTTTGTGCCTTTGTGTCTTATTATTATTATTTTTTTCTGTAATCATCAATTGTCCTTTATTTTAACAACCAGAGTCTATCTGTCTAATGTTTATTTTGTTTCTGTCACTCCCTTTTGTTTCAGTCGTCTATTTCTTGTTTAGCTTGTTAGTTGTAATTCCTTTCATTATTTGGTTTCTCATTAAACAAAAAGGATAAAATAACTTGTAAAAAAAGGATAAAACAATGCTTCTTGATACTTTATTTAAAAATAAAGAAAAAAAATCATTTAGCTGTCTTATAAAAGACATTTATTTAATTGGGAAGCAACAAACTCTGTTTAATCAAGCTTGTTCTAAGTTGTGATAAATCTATCATCTTCTGAATGACATTCTTCTTCTTCTTCTTTGTATTACTCAAAAAGGAAAAAAAAGGAATGACATTCTCCTTTTAGTAAGTGATGCGTAATTTAATTTTATGAGATCATTAATATGCTGAGATTGAATTTTGTCCTTATCTGTAAATAGGAATTTTCTGATGATATTTATCTTATGTGACAGGGGGATGATATGCATAGGACTAAAGCTATTTCATAAAGCGCTTGAGCTTCTTCACAATGTGCACCATCTAAATGGAACTCCTTCCTTTGATATTATTAATATGTATTTATAACATGCTTCTGAATGATCTGACAGCCACTGCCATATTTTTGTTACAGGTTGTAACTGCTCCAATGCAATCGATGAATGCTATAGCTGTTGAAGCGTACAAAAAATACATTTTAGTCTCTCTCATTTATAATGGACAAGTATGCTATTGTTTCTATCTGCTTTATTATTAATTTTTATTATTTATTCTAAGGCCTCAAATTTTTGGAAATGAGAAAGGAATGTCTGGAGGTTGGTTCTTTTGATTTCATCATGTCAGTAGTACACGATATGAATTCTATTCTTGCGTCTTACATCAGTACTGGTACATTAGTGAGAATAGGTCTTAGGATTAATAATATCCTTGTATTTTTTTTTAAATGGCTCTTCTGTCTCCATATATATCAGCTTTCTGTTGGCAACTATTAGCCTCTACCTACAGAAAAAATGAGATTTTCCACCACGGCCAATCAGAAGTATGCACTCAACAAGGAAAAGGATGTAAATTTTGTGATCATTGTTAGATTTTGACCGACGGATATGGAGTTATACTCTCAGAAAATTCTTTGTAGAAATGTATAGTTAACTTCCCTTGTTGGAGTTTTATACTCACAAGAAATTCTTTTATAACTATAGTTTTTCTTGGGGAGAGGGTTCTCTCTACCCACGTCCCTTTGGTTGTTCCTTCTTTCTTTCTCTCTTTTTTTTTTTTTTTTTTTTTTTCTAATAAAATAACTTTCATTGAGAAAAAAATGAAAGAATACTAGGGCATACGATTGAGTAATACTTGCAAGAAAAGAACTTAACTTTCTTTAAAATCTTAACCCTCCACAAAGCATCAAAGATAGACTCTCTGGGGGAGGGGGAGGGATCCAACAAGTGCGAAAGTAGGATTTACAAAGCCTTCTAAAGGGTCGAGACTCCAGTAGCGAACATCCTTTCTCCCAAACCTAAAAATAAACTCTCCTATCAAAGGTAGGAGAGAGACAACCTCCGTCCTTTCCTTGTCGGTCAACAAACGATGAAAACCAAACGAGAAAGAATCAGAGCTCCCTGACTAGACTAAAAAGTCAGAAATGTTTGTCTTTCCTTCTTTCTTTTGTTTAATCCTATATAGTTTCCTATCTGAAAAATTGTTAGATTTTTGACTGAGAGCAAATTATCTTGAATATCTTGAATATCGAATTTTAAACAAAACAATACTTAGCAGCATAAGCAGTTTTTATTACTTTTAGCTTTGAGTCACTTAGTAAGCTTATATTTTCCTGTATTGTTATGGAGACTAATATGCCTATACATCAATCTGGTGGCAGTTTTCAACCAGTCTCCCAAAGTACACTTCTTCAGTAGCACAGAGAAATTTAAAAAATTTCTGTCAGGTAATGTAAATTTGAAGTGAAGAGCTTTTCTTTGTTCATGGACAGATTAAGTACTTTTTTATGAGAAATGTAATTCATTTCATGAATATCACTTCCTTAATGTTAATTTCAACAAAATGTGAATGTTCCTCGTTTTGAATGTGTAGGAATCAATGATCATTTTGTGTGTGTGTGGCTTTTTTTTTGGGGGATAAGATGTGATCATTTTGTGTTTAATTATCAAAATTGTAAATTAAGATCATAATCATCGACGGAATGATGGCTCCGAATTTGCTTGAAATTAGAAAATTTCTTTTAGAATAACTGGATAAAGGTTCCATACAGTAGTTTTCCTTATTCAATGGTGGGTATACAGATGTCATGAGCGATGCAGTTCTTTATTGTAATCCTGAAAAATTGACAATCAAGCTCTATTGATTGATGCTATCTAGATTGTATTTAGGTGGAGCATAATCCTGTTTCTGATTGATCTTAGCAGCATTTTCTGGAGAATGTAAATATAGATAGAATGGTTTGGTGCTTGGTCTATTTCGGTATATTTTTGCAATCAATTTTACTGATGGAATCCATGCATTTGGGTTAAAGGAAATGTACGACCAGTTCCTGTTGCCATCCTCGTACTTGTATCCCCACTCCCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCTTTGTCTTTGTGATGCGTTTATGCTACTTTTATTTATTGTCTGTTTCTTCTTTTACAGCCGTACATTGAATTGGCAAATAGTTATGGCACGGGAAATGTTGAGGAATTAGACACGGTTTTTCAAACAAACAAGGAGAAATTTGAAAGTGTAAGAATTCCTATTTCACTATGATATCACTTCAGATGGTCTAATTAAATGGTATATGCATGCAGTGAAGAGACCTTGGTTTATCGATCTATCATCTAAATGCTTCTGGTTTTTGATATGAGGTATGGATTGTGTTATACCAGGACAACAATCTTGGACTTGTAAAGCAGGCTGTATCTTCTATGTACAAGCGCAACATTCAGAGATTGACGCAGACGTACTTGACCCTCTCTCTTCAAGATATAGCCAGCACTGTTAAACTCAACAGCCCTAAGGAAGCTGAAATGCATGTGCTACAAATGGTAATTTATCGCATGATTAATCTATTAATCAACCTCCACCTCTAGTAATGTCAATTTTTGGTACCAATTTCAGATCCAGGATGGTGAGATTTTTGCAACGATTAATCAGAAGGATGGAATGGTCAGATTTCTAGAGGATTCCGAACAGTACAAATCCTGCAAGATGATTGAGCATATTGACTCTTCGATCCAGAGGTACGATGTTTGGAATTGAATGAGAAAACAGACATATATAAATATATTGTATGTTATCATGATAATGCATCCTGACTTCTCTTAAACATGAGTGCCCCGCTTTAATAAAAAGATCATGTTATTTTGTAGAGCTTTGTGGCAATATAAGCAGGGGTTGGCTGAATTGCCGCATACATCACGACTATGAATGAACTGATTTATGATACTATAATATATACTCGGCTTAGGTTTTGAGCATACTTCATTGTGCTTTTCCCTTCTCTTCCTCTGTTCATCACAGGATAATGACACTTGCGAAGAAATTGACTGCTATGGATGAAAATATATCCTCTGATCCTCTATATTTAGCAAAGGTGAGCATCTCTATATCCATATCTCATTTTGAATTGTAGATATGTAAACTAAAAAGACGTTTGTTTTCAGGCTGGAAGAGAGAGGCAGAGATTTGATTACGATGACTTTGATTCTGTTCCTCAAAAATTTAATATTTGA

mRNA sequence

ATGGACGCTTTGGAATTGGAAGCTCACCTTGTTGGGCCGGACATAGGAGAGAGTCCAGAAGGTGCAGTTGGGCCGTATGACATTGGGTTCAATCCATTCTTCCAGCGATCTGGTATTCACCGCTCGGATTCCGACTTGACAAGAAAGAAAGGAGTGATCGATCGAATAGAAGCTTCATTTCAATTTCTTCTCTCAAAGATATTCCTCCTGCTCCTGCTCCTGCTCCTGCAGGTGCTAAAGCCTGAGCCACTGTTTACCCTCACCATGGGCACGGTTGAAGTTCTTGTGGCACAAATCCAAGGGTTGTCCAGTACCGCCGGTGATATCTCTCGCCTCCACACTCTTCTCAAGCAATCAGAAGAACTACTCCACGCCGAAACCTCTCATTTACCTTCCACATTAGCTCAACTTGATGCTTCCAAACATTCTTTAGGATATCTCTACATTCTAGAGGCATGCACATCTGTACCAATTTCACAAGAGCAAACCAGTTCAATTGTTCTAACTATTTCAAGATTTATCTCTTCTTGCAACCCTGAGCAGATTCGTTTAGCACCTGAAAAATTCGTCTCTGTTTGCAAGAGGTTGAAAGATCAAGTTATACTAGAGGCTCCAATTAGAGGGGTGGCTCCACTTCTTACAGCTATTAGAAAACTCCAGACCTCTTCAGAACATTTAACCACTTTGCATCCGGAGTTTCTTCTTCTCTGCTTATTAGCCAAATGCTACAAAGCTGGCAGATCCATATTGGATAATGATATTCTCGAGGTTGATCAACCAAGAGACCTGTTTCTTTATTGTTATTACGGGGAAATGTTGGAATTCCTCTCCCTTTTGTTGGATAAGTTAAGGAGAGTGGTGTTTAGTTTTAAGGGGGAAGGCGTTCGAGACACAATTAAGGAGGACTTGGCCAAGGTTGTAACTGCTCCAATGCAATCGATGAATGCTATAGCTGTTGAAGCGTACAAAAAATACATTTTAGTCTCTCTCATTTATAATGGACAACCGTACATTGAATTGGCAAATAGTTATGGCACGGGAAATGTTGAGGAATTAGACACGGTTTTTCAAACAAACAAGGAGAAATTTGAAAGTGACAACAATCTTGGACTTGTAAAGCAGGCTGTATCTTCTATGTACAAGCGCAACATTCAGAGATTGACGCAGACGTACTTGACCCTCTCTCTTCAAGATATAGCCAGCACTGTTAAACTCAACAGCCCTAAGGAAGCTGAAATGCATGTGCTACAAATGATCCAGGATGGTGAGATTTTTGCAACGATTAATCAGAAGGATGGAATGGTCAGATTTCTAGAGGATTCCGAACAGTACAAATCCTGCAAGATGATTGAGCATATTGACTCTTCGATCCAGAGGATAATGACACTTGCGAAGAAATTGACTGCTATGGATGAAAATATATCCTCTGATCCTCTATATTTAGCAAAGGCTGGAAGAGAGAGGCAGAGATTTGATTACGATGACTTTGATTCTGTTCCTCAAAAATTTAATATTTGA

Coding sequence (CDS)

ATGGACGCTTTGGAATTGGAAGCTCACCTTGTTGGGCCGGACATAGGAGAGAGTCCAGAAGGTGCAGTTGGGCCGTATGACATTGGGTTCAATCCATTCTTCCAGCGATCTGGTATTCACCGCTCGGATTCCGACTTGACAAGAAAGAAAGGAGTGATCGATCGAATAGAAGCTTCATTTCAATTTCTTCTCTCAAAGATATTCCTCCTGCTCCTGCTCCTGCTCCTGCAGGTGCTAAAGCCTGAGCCACTGTTTACCCTCACCATGGGCACGGTTGAAGTTCTTGTGGCACAAATCCAAGGGTTGTCCAGTACCGCCGGTGATATCTCTCGCCTCCACACTCTTCTCAAGCAATCAGAAGAACTACTCCACGCCGAAACCTCTCATTTACCTTCCACATTAGCTCAACTTGATGCTTCCAAACATTCTTTAGGATATCTCTACATTCTAGAGGCATGCACATCTGTACCAATTTCACAAGAGCAAACCAGTTCAATTGTTCTAACTATTTCAAGATTTATCTCTTCTTGCAACCCTGAGCAGATTCGTTTAGCACCTGAAAAATTCGTCTCTGTTTGCAAGAGGTTGAAAGATCAAGTTATACTAGAGGCTCCAATTAGAGGGGTGGCTCCACTTCTTACAGCTATTAGAAAACTCCAGACCTCTTCAGAACATTTAACCACTTTGCATCCGGAGTTTCTTCTTCTCTGCTTATTAGCCAAATGCTACAAAGCTGGCAGATCCATATTGGATAATGATATTCTCGAGGTTGATCAACCAAGAGACCTGTTTCTTTATTGTTATTACGGGGAAATGTTGGAATTCCTCTCCCTTTTGTTGGATAAGTTAAGGAGAGTGGTGTTTAGTTTTAAGGGGGAAGGCGTTCGAGACACAATTAAGGAGGACTTGGCCAAGGTTGTAACTGCTCCAATGCAATCGATGAATGCTATAGCTGTTGAAGCGTACAAAAAATACATTTTAGTCTCTCTCATTTATAATGGACAACCGTACATTGAATTGGCAAATAGTTATGGCACGGGAAATGTTGAGGAATTAGACACGGTTTTTCAAACAAACAAGGAGAAATTTGAAAGTGACAACAATCTTGGACTTGTAAAGCAGGCTGTATCTTCTATGTACAAGCGCAACATTCAGAGATTGACGCAGACGTACTTGACCCTCTCTCTTCAAGATATAGCCAGCACTGTTAAACTCAACAGCCCTAAGGAAGCTGAAATGCATGTGCTACAAATGATCCAGGATGGTGAGATTTTTGCAACGATTAATCAGAAGGATGGAATGGTCAGATTTCTAGAGGATTCCGAACAGTACAAATCCTGCAAGATGATTGAGCATATTGACTCTTCGATCCAGAGGATAATGACACTTGCGAAGAAATTGACTGCTATGGATGAAAATATATCCTCTGATCCTCTATATTTAGCAAAGGCTGGAAGAGAGAGGCAGAGATTTGATTACGATGACTTTGATTCTGTTCCTCAAAAATTTAATATTTGA

Protein sequence

MDALELEAHLVGPDIGESPEGAVGPYDIGFNPFFQRSGIHRSDSDLTRKKGVIDRIEASFQFLLSKIFLLLLLLLLQVLKPEPLFTLTMGTVEVLVAQIQGLSSTAGDISRLHTLLKQSEELLHAETSHLPSTLAQLDASKHSLGYLYILEACTSVPISQEQTSSIVLTISRFISSCNPEQIRLAPEKFVSVCKRLKDQVILEAPIRGVAPLLTAIRKLQTSSEHLTTLHPEFLLLCLLAKCYKAGRSILDNDILEVDQPRDLFLYCYYGEMLEFLSLLLDKLRRVVFSFKGEGVRDTIKEDLAKVVTAPMQSMNAIAVEAYKKYILVSLIYNGQPYIELANSYGTGNVEELDTVFQTNKEKFESDNNLGLVKQAVSSMYKRNIQRLTQTYLTLSLQDIASTVKLNSPKEAEMHVLQMIQDGEIFATINQKDGMVRFLEDSEQYKSCKMIEHIDSSIQRIMTLAKKLTAMDENISSDPLYLAKAGRERQRFDYDDFDSVPQKFNI

Homology

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BLAST of HG10018477 vs. NCBI nr
Match: XP_016899451.1 (PREDICTED: COP9 signalosome complex subunit 3 isoform X2 [Cucumis melo])

HSP 1 Score: 701.8 bits (1810), Expect = 4.2e-198
Identity = 372/417 (89.21%), Postives = 381/417 (91.37%), Query Frame = 0


Query: 89  MGTVEVLVAQIQGLSSTAGDISRLHTLLKQSEELLHAETSHLPSTLAQLDASKHSLGYLY 148
           MGTVEVLVAQIQGLS+TAGDISRLHTLLKQSEELLHAETS LPS LAQLDASKHSLGYLY
Sbjct: 1   MGTVEVLVAQIQGLSTTAGDISRLHTLLKQSEELLHAETSRLPSALAQLDASKHSLGYLY 60

Query: 149 ILEACTSVPISQEQTSSIVLTISRFISSCNPEQIRLAPEKFVSVCKRLKDQVILEAPIRG 208
           ILEACTSVPISQEQ+SSI+LTISRFISSCNPEQIRLAPEKFVSVCKR KDQVI EAPIRG
Sbjct: 61  ILEACTSVPISQEQSSSILLTISRFISSCNPEQIRLAPEKFVSVCKRFKDQVIQEAPIRG 120

Query: 209 VAPLLTAIRKLQTSSEHLTTLHPEFLLLCLLAKCYKAGRSILDNDILEVDQPRDLFLYCY 268
           VAPLLTA+RKLQTSSEHLTTLHPEFLLLCLLAK YK GRSILDNDILEVDQPRDLFLYCY
Sbjct: 121 VAPLLTAVRKLQTSSEHLTTLHPEFLLLCLLAKSYKTGRSILDNDILEVDQPRDLFLYCY 180

Query: 269 YGEMLEFLSLLLDKLRRVVFSFKGEGVRDTIKEDLAKVVTAPMQSMNAIAVEAYKKYILV 328
           YG M+     L  K                  E L  VVTAPMQSMNAIAVEAYKKYILV
Sbjct: 181 YGGMICIGLKLFQK----------------ALELLHNVVTAPMQSMNAIAVEAYKKYILV 240

Query: 329 SLIYNGQPYIELANSYGTGNVEELDTVFQTNKEKFESDNNLGLVKQAVSSMYKRNIQRLT 388
           SLIYNGQPYIELANSY TGNVEELDTVFQTN++KFESDNNLGLVKQAVSSMYKRNIQRLT
Sbjct: 241 SLIYNGQPYIELANSYSTGNVEELDTVFQTNRQKFESDNNLGLVKQAVSSMYKRNIQRLT 300

Query: 389 QTYLTLSLQDIASTVKLNSPKEAEMHVLQMIQDGEIFATINQKDGMVRFLEDSEQYKSCK 448
           QTYLTLSLQDIASTVKLNSPKEAEMHVLQMIQDGEIFATINQKDGMVRFLEDSEQYKSC+
Sbjct: 301 QTYLTLSLQDIASTVKLNSPKEAEMHVLQMIQDGEIFATINQKDGMVRFLEDSEQYKSCR 360

Query: 449 MIEHIDSSIQRIMTLAKKLTAMDENISSDPLYLAKAGRERQRFDYDDFDSVPQKFNI 506
           MIEHIDSSIQRIMTL+KKLTAMDENISSDPLYLAKAGRERQRFDYDDFDSVPQKFNI
Sbjct: 361 MIEHIDSSIQRIMTLSKKLTAMDENISSDPLYLAKAGRERQRFDYDDFDSVPQKFNI 401

[Close]

BLAST of HG10018477 vs. NCBI nr
Match: XP_038886130.1 (COP9 signalosome complex subunit 3 [Benincasa hispida])

HSP 1 Score: 698.7 bits (1802), Expect = 3.6e-197
Identity = 378/439 (86.10%), Postives = 383/439 (87.24%), Query Frame = 0


Query: 89  MGTVEVLVAQIQGLSSTAGDISRLHTLLKQSEELLHAETSHLPSTLAQLDASKHSLGYLY 148
           MGTVEVLVAQIQGLSSTA DISRLHTLLKQSEELLH+ETS LPS LAQLDASKHSLGYLY
Sbjct: 1   MGTVEVLVAQIQGLSSTAADISRLHTLLKQSEELLHSETSRLPSALAQLDASKHSLGYLY 60

Query: 149 ILEACTSVPISQEQTSSIVLTISRFISSCNPEQIRLAPEKFVSVCKRLKDQVILEAPIRG 208
           ILEACTSVPISQEQ+SSIVLTISRFISSCNPEQIRLAPEKFVSVCKR KDQVILEAPIRG
Sbjct: 61  ILEACTSVPISQEQSSSIVLTISRFISSCNPEQIRLAPEKFVSVCKRFKDQVILEAPIRG 120

Query: 209 VAPLLTAIRKLQTSSEHLTTLHPEFLLLCLLAKCYKAGRSILDNDILEVDQPRDLFLYCY 268
           VAPLLTAIRKLQTSSEHLTTLHPEFLLLCLLAKCYK GRSILDNDILEVDQPRDLFLYCY
Sbjct: 121 VAPLLTAIRKLQTSSEHLTTLHPEFLLLCLLAKCYKTGRSILDNDILEVDQPRDLFLYCY 180

Query: 269 YGEMLEFLSLLLDKLRRVVFSFKGEGVRDTIKEDLAKVVTAPMQSMNAIAVEAYKKYILV 328
           YG M+     L  K                  E L  VVTAPMQSMNAIAVEAYKKYILV
Sbjct: 181 YGGMICIGLKLFHK----------------ALELLHNVVTAPMQSMNAIAVEAYKKYILV 240

Query: 329 SLIYNG----------------------QPYIELANSYGTGNVEELDTVFQTNKEKFESD 388
           SLIYNG                      QPYIELANSYGTGNVEELDTVFQTN+EK+ESD
Sbjct: 241 SLIYNGQFSTSLPKYTSSVAQRNLKNFCQPYIELANSYGTGNVEELDTVFQTNREKYESD 300

Query: 389 NNLGLVKQAVSSMYKRNIQRLTQTYLTLSLQDIASTVKLNSPKEAEMHVLQMIQDGEIFA 448
           NNLGLVKQAVSSMYKRNIQRLTQTYLTLSLQDIASTVKLNSPKEAEMHVLQMIQDGEIFA
Sbjct: 301 NNLGLVKQAVSSMYKRNIQRLTQTYLTLSLQDIASTVKLNSPKEAEMHVLQMIQDGEIFA 360

Query: 449 TINQKDGMVRFLEDSEQYKSCKMIEHIDSSIQRIMTLAKKLTAMDENISSDPLYLAKAGR 506
           TINQKDGMVRFLEDSEQYKSCKMIEHIDSSIQRIMTLAKKLTAMDENISSDPLYLAKAGR
Sbjct: 361 TINQKDGMVRFLEDSEQYKSCKMIEHIDSSIQRIMTLAKKLTAMDENISSDPLYLAKAGR 420

[Close]

BLAST of HG10018477 vs. NCBI nr
Match: XP_004138469.2 (COP9 signalosome complex subunit 3 [Cucumis sativus] >KGN45722.1 hypothetical protein Csa_005758 [Cucumis sativus])

HSP 1 Score: 695.7 bits (1794), Expect = 3.0e-196
Identity = 387/483 (80.12%), Postives = 397/483 (82.19%), Query Frame = 0


Query: 45  DLTRKKGVIDRIEASFQFLLSKIFLLLLLLLLQVLKPEPLFTLTMGTVEVLVAQIQGLSS 104
           D   +    DRIE  FQFLLSKI     + L   + P      TMGTVEVLVAQIQGLSS
Sbjct: 26  DKKERSDRFDRIELPFQFLLSKILFPATVQLQLRIPP------TMGTVEVLVAQIQGLSS 85

Query: 105 TAGDISRLHTLLKQSEELLHAETSHLPSTLAQLDASKHSLGYLYILEACTSVPISQEQTS 164
           TAGDISRLHTLLKQSEELLHAETS LPS LAQLDASKHSLGYLYILEACTSVPISQEQ+S
Sbjct: 86  TAGDISRLHTLLKQSEELLHAETSRLPSALAQLDASKHSLGYLYILEACTSVPISQEQSS 145

Query: 165 SIVLTISRFISSCNPEQIRLAPEKFVSVCKRLKDQVILEAPIRGVAPLLTAIRKLQTSSE 224
           SI+LTISRFIS CNPEQIRLAPEKFVSVCKR KDQVI EAPIRGVAPLLTA+RKLQTSSE
Sbjct: 146 SILLTISRFISCCNPEQIRLAPEKFVSVCKRFKDQVIQEAPIRGVAPLLTAVRKLQTSSE 205

Query: 225 HLTTLHPEFLLLCLLAKCYKAGRSILDNDILEVDQPRDLFLYCYYGEMLEFLSLLLDKLR 284
           HLTTLHPEFLLLCLLAK YK GRSILDNDILEVDQPRDLFLYCYYG M+     L  K  
Sbjct: 206 HLTTLHPEFLLLCLLAKSYKTGRSILDNDILEVDQPRDLFLYCYYGGMICVGLKLFHK-- 265

Query: 285 RVVFSFKGEGVRDTIKEDLAKVVTAPMQSMNAIAVEAYKKYILVSLIYNG---------- 344
                           E L  VVTAPMQSMNAIAVEAYKKYILVSLIYNG          
Sbjct: 266 --------------ALELLHNVVTAPMQSMNAIAVEAYKKYILVSLIYNGQFSTSLPKYT 325

Query: 345 ------------QPYIELANSYGTGNVEELDTVFQTNKEKFESDNNLGLVKQAVSSMYKR 404
                       QPYIELANSY TGNVEELDTVFQTN++KFESDNNLGLVKQAVSSMYKR
Sbjct: 326 SSVAQRNLKNFCQPYIELANSYSTGNVEELDTVFQTNRQKFESDNNLGLVKQAVSSMYKR 385

Query: 405 NIQRLTQTYLTLSLQDIASTVKLNSPKEAEMHVLQMIQDGEIFATINQKDGMVRFLEDSE 464
           NIQRLTQTYLTLSLQDIASTVKLNSPKEAEMHVLQMIQDGEIFATINQKDGMVRFLEDSE
Sbjct: 386 NIQRLTQTYLTLSLQDIASTVKLNSPKEAEMHVLQMIQDGEIFATINQKDGMVRFLEDSE 445

Query: 465 QYKSCKMIEHIDSSIQRIMTLAKKLTAMDENISSDPLYLAKAGRERQRFDYDDFDSVPQK 506
           QYKSC+MIE IDSSIQRIMTL KKLTAMDENISSDPLYLAKAGRERQRFDYDDFDSVPQK
Sbjct: 446 QYKSCRMIERIDSSIQRIMTLTKKLTAMDENISSDPLYLAKAGRERQRFDYDDFDSVPQK 486

[Close]

BLAST of HG10018477 vs. NCBI nr
Match: XP_008441368.1 (PREDICTED: COP9 signalosome complex subunit 3 isoform X1 [Cucumis melo] >KAA0056600.1 COP9 signalosome complex subunit 3 isoform X1 [Cucumis melo var. makuwa] >TYK24283.1 COP9 signalosome complex subunit 3 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 689.1 bits (1777), Expect = 2.8e-194
Identity = 372/439 (84.74%), Postives = 381/439 (86.79%), Query Frame = 0


Query: 89  MGTVEVLVAQIQGLSSTAGDISRLHTLLKQSEELLHAETSHLPSTLAQLDASKHSLGYLY 148
           MGTVEVLVAQIQGLS+TAGDISRLHTLLKQSEELLHAETS LPS LAQLDASKHSLGYLY
Sbjct: 1   MGTVEVLVAQIQGLSTTAGDISRLHTLLKQSEELLHAETSRLPSALAQLDASKHSLGYLY 60

Query: 149 ILEACTSVPISQEQTSSIVLTISRFISSCNPEQIRLAPEKFVSVCKRLKDQVILEAPIRG 208
           ILEACTSVPISQEQ+SSI+LTISRFISSCNPEQIRLAPEKFVSVCKR KDQVI EAPIRG
Sbjct: 61  ILEACTSVPISQEQSSSILLTISRFISSCNPEQIRLAPEKFVSVCKRFKDQVIQEAPIRG 120

Query: 209 VAPLLTAIRKLQTSSEHLTTLHPEFLLLCLLAKCYKAGRSILDNDILEVDQPRDLFLYCY 268
           VAPLLTA+RKLQTSSEHLTTLHPEFLLLCLLAK YK GRSILDNDILEVDQPRDLFLYCY
Sbjct: 121 VAPLLTAVRKLQTSSEHLTTLHPEFLLLCLLAKSYKTGRSILDNDILEVDQPRDLFLYCY 180

Query: 269 YGEMLEFLSLLLDKLRRVVFSFKGEGVRDTIKEDLAKVVTAPMQSMNAIAVEAYKKYILV 328
           YG M+     L  K                  E L  VVTAPMQSMNAIAVEAYKKYILV
Sbjct: 181 YGGMICIGLKLFQK----------------ALELLHNVVTAPMQSMNAIAVEAYKKYILV 240

Query: 329 SLIYNG----------------------QPYIELANSYGTGNVEELDTVFQTNKEKFESD 388
           SLIYNG                      QPYIELANSY TGNVEELDTVFQTN++KFESD
Sbjct: 241 SLIYNGQFSTSLPKYTSSVAQRNLKNFCQPYIELANSYSTGNVEELDTVFQTNRQKFESD 300

Query: 389 NNLGLVKQAVSSMYKRNIQRLTQTYLTLSLQDIASTVKLNSPKEAEMHVLQMIQDGEIFA 448
           NNLGLVKQAVSSMYKRNIQRLTQTYLTLSLQDIASTVKLNSPKEAEMHVLQMIQDGEIFA
Sbjct: 301 NNLGLVKQAVSSMYKRNIQRLTQTYLTLSLQDIASTVKLNSPKEAEMHVLQMIQDGEIFA 360

Query: 449 TINQKDGMVRFLEDSEQYKSCKMIEHIDSSIQRIMTLAKKLTAMDENISSDPLYLAKAGR 506
           TINQKDGMVRFLEDSEQYKSC+MIEHIDSSIQRIMTL+KKLTAMDENISSDPLYLAKAGR
Sbjct: 361 TINQKDGMVRFLEDSEQYKSCRMIEHIDSSIQRIMTLSKKLTAMDENISSDPLYLAKAGR 420

[Close]

BLAST of HG10018477 vs. NCBI nr
Match: XP_022992614.1 (COP9 signalosome complex subunit 3-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 673.7 bits (1737), Expect = 1.2e-189
Identity = 361/439 (82.23%), Postives = 380/439 (86.56%), Query Frame = 0


Query: 89  MGTVEVLVAQIQGLSSTAGDISRLHTLLKQSEELLHAETSHLPSTLAQLDASKHSLGYLY 148
           M TVEVLVAQIQGLSSTAGDISRLHTLLKQSEELLHA+T+ LPS LAQLDAS+HSLGYL+
Sbjct: 1   MATVEVLVAQIQGLSSTAGDISRLHTLLKQSEELLHADTARLPSALAQLDASEHSLGYLF 60

Query: 149 ILEACTSVPISQEQTSSIVLTISRFISSCNPEQIRLAPEKFVSVCKRLKDQVILEAPIRG 208
           ILEACTSVPISQ+Q+SSI+LTISRFISSCN +QIRLAPEKF SVCKR KDQV+LEAPIRG
Sbjct: 61  ILEACTSVPISQDQSSSIILTISRFISSCNQDQIRLAPEKFASVCKRFKDQVMLEAPIRG 120

Query: 209 VAPLLTAIRKLQTSSEHLTTLHPEFLLLCLLAKCYKAGRSILDNDILEVDQPRDLFLYCY 268
           VAPLLTAIRKLQTSSEHLT+LHP+FLLLCLLAKCYK GRSILDNDILEVDQPRDLFLYCY
Sbjct: 121 VAPLLTAIRKLQTSSEHLTSLHPDFLLLCLLAKCYKTGRSILDNDILEVDQPRDLFLYCY 180

Query: 269 YGEMLEFLSLLLDKLRRVVFSFKGEGVRDTIKEDLAKVVTAPMQSMNAIAVEAYKKYILV 328
           YG M+     L  K                  E L  VVTAPM S+NAIAVEAYKKYIL+
Sbjct: 181 YGGMICIGLKLFHK----------------ALELLHNVVTAPMPSLNAIAVEAYKKYILL 240

Query: 329 SLIYNG----------------------QPYIELANSYGTGNVEELDTVFQTNKEKFESD 388
           SLIYNG                      QPYIELANSYGTGNV+ELDTVFQTN+EKFESD
Sbjct: 241 SLIYNGQFSSSLPKYTSSVAQRNLKNFCQPYIELANSYGTGNVDELDTVFQTNREKFESD 300

Query: 389 NNLGLVKQAVSSMYKRNIQRLTQTYLTLSLQDIASTVKLNSPKEAEMHVLQMIQDGEIFA 448
           NNLGLVKQAVSS+YKRNIQRLTQTYLTLSLQDIA+TVKLNSPKEAEMHVLQMIQDGEIFA
Sbjct: 301 NNLGLVKQAVSSLYKRNIQRLTQTYLTLSLQDIANTVKLNSPKEAEMHVLQMIQDGEIFA 360

Query: 449 TINQKDGMVRFLEDSEQYKSCKMIEHIDSSIQRIMTLAKKLTAMDENISSDPLYLAKAGR 506
           TINQKDGMVRFLEDSEQYKSCKMIE+IDSSIQRIMTLAKKLTAMDENISSDPLYLAKAGR
Sbjct: 361 TINQKDGMVRFLEDSEQYKSCKMIENIDSSIQRIMTLAKKLTAMDENISSDPLYLAKAGR 420

[Close]

BLAST of HG10018477 vs. ExPASy Swiss-Prot
Match: Q8W575 (COP9 signalosome complex subunit 3 OS=Arabidopsis thaliana OX=3702 GN=CSN3 PE=1 SV=2)

HSP 1 Score: 442.2 bits (1136), Expect = 7.9e-123
Identity = 251/441 (56.92%), Postives = 308/441 (69.84%), Query Frame = 0


Query: 89  MGTVEVLVAQIQGLSSTAGDISRLHTLLKQSEELLHAETSHLPSTLAQLDASKHSLGYLY 148
           + +VE ++  IQGLS +  D+S LH LL+ +++ L AE     STL QLDASKHSLGYLY
Sbjct: 5   VNSVEAVITSIQGLSGSPEDLSALHDLLRGAQDSLRAEPGVNFSTLDQLDASKHSLGYLY 64

Query: 149 ILEACTSVPISQEQTSSIVLTISRFISSCNPEQIRLAPEKFVSVCKRLKDQVI-LEAPIR 208
            LE  T  P+S+E+ +  +  I+RFI+SC+  QIRLA  KFVS+CK LKD VI L  P+R
Sbjct: 65  FLEVLTCGPVSKEKAAYEIPIIARFINSCDAGQIRLASYKFVSLCKILKDHVIALGDPLR 124

Query: 209 GVAPLLTAIRKLQTSSEHLTTLHPEFLLLCLLAKCYKAGRSILDNDILEVDQPRDLFLYC 268
           GV PLL A++KLQ SS+ LT LHP+ L LCL AK YK+G SIL +DI+E+DQPRD FLY 
Sbjct: 125 GVGPLLNAVQKLQVSSKRLTALHPDVLQLCLQAKSYKSGFSILSDDIVEIDQPRDFFLYS 184

Query: 269 YYGEMLEFLSLLLDKLRRVVFSFKGEGVRDTIKEDLAKVVTAPMQSMNAIAVEAYKKYIL 328
           YYG M   + + L + ++ +             E L  VVTAPM  +NAIA+EAYKKYIL
Sbjct: 185 YYGGM---ICIGLKRFQKAL-------------ELLYNVVTAPMHQVNAIALEAYKKYIL 244

Query: 329 VSLIYNGQ----------------------PYIELANSYGTGNVEELDTVFQTNKEKFES 388
           VSLI+NGQ                      PYIEL N Y  G + EL+ +      +FE 
Sbjct: 245 VSLIHNGQFTNTLPKCASTAAQRSFKNYTGPYIELGNCYNDGKIGELEALVVARNAEFEE 304

Query: 389 DNNLGLVKQAVSSMYKRNIQRLTQTYLTLSLQDIASTVKLNSPKEAEMHVLQMIQDGEIF 448
           D NLGLVKQAVSS+YKRNI RLTQ YLTLSLQDIA+ V+L + KEAEMHVLQMIQDG+I 
Sbjct: 305 DKNLGLVKQAVSSLYKRNILRLTQKYLTLSLQDIANMVQLGNAKEAEMHVLQMIQDGQIH 364

Query: 449 ATINQKDGMVRFLEDSEQYKSCKMIEHIDSSIQRIMTLAKKLTAMDENISSDPLYLAKAG 506
           A INQKDGMVRFLED EQYKS +MIE +DS IQR + L+K L AMDE++S DPLYL K G
Sbjct: 365 ALINQKDGMVRFLEDPEQYKSSEMIEIMDSVIQRTIGLSKNLLAMDESLSCDPLYLGKVG 424

[Close]

BLAST of HG10018477 vs. ExPASy Swiss-Prot
Match: Q9UNS2 (COP9 signalosome complex subunit 3 OS=Homo sapiens OX=9606 GN=COPS3 PE=1 SV=3)

HSP 1 Score: 257.3 bits (656), Expect = 3.6e-67
Identity = 162/441 (36.73%), Postives = 251/441 (56.92%), Query Frame = 0


Query: 92  VEVLVAQIQGLSSTAGDISRLHTLLKQSEELLHAETSHLPSTLAQLDASKHSLGYLYILE 151
           +E  V  ++ LS+  G +++L  L+ +S ELL    SHL + L  LD  +HSLG L +L 
Sbjct: 5   LEQFVNSVRQLSA-QGQMTQLCELINKSGELLAKNLSHLDTVLGALDVQEHSLGVLAVLF 64

Query: 152 ACTSVPISQEQTSSIVLTISRFISSCNPEQIRLAPEKFVSVCKRLKDQVI-LEAPIRGVA 211
              S+P S     ++   +  FIS+CN E IR A + F  +C +L + ++  + P+RG+ 
Sbjct: 65  VKFSMP-SVPDFETLFSQVQLFISTCNGEHIRYATDTFAGLCHQLTNALVERKQPLRGIG 124

Query: 212 PLLTAIRKLQTSSEHLTTLHPEFLLLCLLAKCYKAGRSILDNDILEVDQ------PRDLF 271
            L  AI K+Q ++  LT++H +   LCLLAKC+K     LD D++++ +       +   
Sbjct: 125 ILKQAIDKMQMNTNQLTSIHADLCQLCLLAKCFKPALPYLDVDMMDICKENGAYDAKHFL 184

Query: 272 LYCYYGEMLEFLSLLLDKLRRVVFSFKGEGVRDTIKEDLAKVVTAPMQSMNAIAVEAYKK 331
            Y YYG M   +   L    R ++ ++             + +T P  +++ I +E+YKK
Sbjct: 185 CYYYYGGM---IYTGLKNFERALYFYE-------------QAITTPAMAVSHIMLESYKK 244

Query: 332 YILVSLIYNGQ---------------------PYIELANSYGTGNVEELDTVFQTNKEKF 391
           YILVSLI  G+                      Y ELA  Y T N  EL  +   + E F
Sbjct: 245 YILVSLILLGKVQQLPKYTSQIVGRFIKPLSNAYHELAQVYSTNNPSELRNLVNKHSETF 304

Query: 392 ESDNNLGLVKQAVSSMYKRNIQRLTQTYLTLSLQDIASTVKLNSPKEAEMHVLQMIQDGE 451
             DNN+GLVKQ +SS+YK+NIQRLT+T+LTLSLQD+AS V+L+ P+EAE +VL MI+DGE
Sbjct: 305 TRDNNMGLVKQCLSSLYKKNIQRLTKTFLTLSLQDMASRVQLSGPQEAEKYVLHMIEDGE 364

Query: 452 IFATINQKDGMVRFLEDSEQYKSCKMIEHIDSSIQRIMTLAKKLTAMDENISSDPLYLAK 505
           IFA+INQKDGMV F ++ E+Y +  M+ +ID  + + + L ++L AMD+ I+ +P ++ K
Sbjct: 365 IFASINQKDGMVSFHDNPEKYNNPAMLHNIDQEMLKCIELDERLKAMDQEITVNPQFVQK 423

[Close]

BLAST of HG10018477 vs. ExPASy Swiss-Prot
Match: Q4R898 (COP9 signalosome complex subunit 3 OS=Macaca fascicularis OX=9541 GN=COPS3 PE=2 SV=1)

HSP 1 Score: 257.3 bits (656), Expect = 3.6e-67
Identity = 162/441 (36.73%), Postives = 251/441 (56.92%), Query Frame = 0


Query: 92  VEVLVAQIQGLSSTAGDISRLHTLLKQSEELLHAETSHLPSTLAQLDASKHSLGYLYILE 151
           +E  V  ++ LS+  G +++L  L+ +S ELL    SHL + L  LD  +HSLG L +L 
Sbjct: 5   LEQFVNSVRQLSA-QGQMTQLCELINKSGELLAKNLSHLDTVLGALDVQEHSLGVLAVLF 64

Query: 152 ACTSVPISQEQTSSIVLTISRFISSCNPEQIRLAPEKFVSVCKRLKDQVI-LEAPIRGVA 211
              S+P S     ++   +  FIS+CN E IR A + F  +C +L + ++  + P+RG+ 
Sbjct: 65  VKFSMP-SVPDFETLFSQVQLFISTCNGEHIRYATDTFAGLCHQLTNALVERKQPLRGIG 124

Query: 212 PLLTAIRKLQTSSEHLTTLHPEFLLLCLLAKCYKAGRSILDNDILEVDQ------PRDLF 271
            L  AI K+Q ++  LT++H +   LCLLAKC+K     LD D++++ +       +   
Sbjct: 125 ILKQAIDKMQMNTNQLTSIHADLCQLCLLAKCFKPALPYLDVDMMDICKENGAYDAKHFL 184

Query: 272 LYCYYGEMLEFLSLLLDKLRRVVFSFKGEGVRDTIKEDLAKVVTAPMQSMNAIAVEAYKK 331
            Y YYG M   +   L    R ++ ++             + +T P  +++ I +E+YKK
Sbjct: 185 CYYYYGGM---IYTGLKNFERALYFYE-------------QAITTPAMAVSHIMLESYKK 244

Query: 332 YILVSLIYNGQ---------------------PYIELANSYGTGNVEELDTVFQTNKEKF 391
           YILVSLI  G+                      Y ELA  Y T N  EL  +   + E F
Sbjct: 245 YILVSLILLGKVQQLPKYTSQIVGRFIKPLSNAYHELAQVYSTNNPSELRNLVNKHSETF 304

Query: 392 ESDNNLGLVKQAVSSMYKRNIQRLTQTYLTLSLQDIASTVKLNSPKEAEMHVLQMIQDGE 451
             DNN+GLVKQ +SS+YK+NIQRLT+T+LTLSLQD+AS V+L+ P+EAE +VL MI+DGE
Sbjct: 305 TRDNNMGLVKQCLSSLYKKNIQRLTKTFLTLSLQDMASRVQLSGPQEAEKYVLHMIEDGE 364

Query: 452 IFATINQKDGMVRFLEDSEQYKSCKMIEHIDSSIQRIMTLAKKLTAMDENISSDPLYLAK 505
           IFA+INQKDGMV F ++ E+Y +  M+ +ID  + + + L ++L AMD+ I+ +P ++ K
Sbjct: 365 IFASINQKDGMVSFHDNPEKYNNPAMLHNIDQEMLKCIELDERLKAMDQEITVNPQFVQK 423

[Close]

BLAST of HG10018477 vs. ExPASy Swiss-Prot
Match: Q5RFS2 (COP9 signalosome complex subunit 3 OS=Pongo abelii OX=9601 GN=COPS3 PE=2 SV=1)

HSP 1 Score: 257.3 bits (656), Expect = 3.6e-67
Identity = 162/441 (36.73%), Postives = 251/441 (56.92%), Query Frame = 0


Query: 92  VEVLVAQIQGLSSTAGDISRLHTLLKQSEELLHAETSHLPSTLAQLDASKHSLGYLYILE 151
           +E  V  ++ LS+  G +++L  L+ +S ELL    SHL + L  LD  +HSLG L +L 
Sbjct: 5   LEQFVNSVRQLSA-QGQMTQLCELINKSGELLAKNLSHLDTVLGALDVQEHSLGVLAVLF 64

Query: 152 ACTSVPISQEQTSSIVLTISRFISSCNPEQIRLAPEKFVSVCKRLKDQVI-LEAPIRGVA 211
              S+P S     ++   +  FIS+CN E IR A + F  +C +L + ++  + P+RG+ 
Sbjct: 65  VKFSMP-SVPDFETLFSQVQLFISTCNGEHIRYATDTFAGLCHQLTNALVERKQPLRGIG 124

Query: 212 PLLTAIRKLQTSSEHLTTLHPEFLLLCLLAKCYKAGRSILDNDILEVDQ------PRDLF 271
            L  AI K+Q ++  LT++H +   LCLLAKC+K     LD D++++ +       +   
Sbjct: 125 ILKQAIDKMQMNTNQLTSIHADLCQLCLLAKCFKPALPYLDVDMMDICKENGAYDAKHFL 184

Query: 272 LYCYYGEMLEFLSLLLDKLRRVVFSFKGEGVRDTIKEDLAKVVTAPMQSMNAIAVEAYKK 331
            Y YYG M   +   L    R ++ ++             + +T P  +++ I +E+YKK
Sbjct: 185 CYYYYGGM---IYTGLKNFERALYFYE-------------QAITTPAMAVSHIMLESYKK 244

Query: 332 YILVSLIYNGQ---------------------PYIELANSYGTGNVEELDTVFQTNKEKF 391
           YILVSLI  G+                      Y ELA  Y T N  EL  +   + E F
Sbjct: 245 YILVSLILLGKVQQLPKYTSQIVGRFIKPLSNAYHELAQVYSTNNPSELRNLVNKHSETF 304

Query: 392 ESDNNLGLVKQAVSSMYKRNIQRLTQTYLTLSLQDIASTVKLNSPKEAEMHVLQMIQDGE 451
             DNN+GLVKQ +SS+YK+NIQRLT+T+LTLSLQD+AS V+L+ P+EAE +VL MI+DGE
Sbjct: 305 TRDNNMGLVKQCLSSLYKKNIQRLTKTFLTLSLQDMASRVQLSGPQEAEKYVLHMIEDGE 364

Query: 452 IFATINQKDGMVRFLEDSEQYKSCKMIEHIDSSIQRIMTLAKKLTAMDENISSDPLYLAK 505
           IFA+INQKDGMV F ++ E+Y +  M+ +ID  + + + L ++L AMD+ I+ +P ++ K
Sbjct: 365 IFASINQKDGMVSFHDNPEKYNNPAMLHNIDQEMLKCIELDERLKAMDQEITVNPQFVQK 423

[Close]

BLAST of HG10018477 vs. ExPASy Swiss-Prot
Match: O88543 (COP9 signalosome complex subunit 3 OS=Mus musculus OX=10090 GN=Cops3 PE=1 SV=3)

HSP 1 Score: 256.9 bits (655), Expect = 4.7e-67
Identity = 162/441 (36.73%), Postives = 251/441 (56.92%), Query Frame = 0


Query: 92  VEVLVAQIQGLSSTAGDISRLHTLLKQSEELLHAETSHLPSTLAQLDASKHSLGYLYILE 151
           +E  V  ++ LS+  G +++L  L+ +S ELL    SHL + L  LD  +HSLG L +L 
Sbjct: 5   LEQFVNSVRQLSA-QGQMTQLCELINKSGELLAKNLSHLDTVLGALDVQEHSLGVLAVLF 64

Query: 152 ACTSVPISQEQTSSIVLTISRFISSCNPEQIRLAPEKFVSVCKRLKDQVI-LEAPIRGVA 211
              S+P S     ++   +  FIS+CN E IR A + F  +C +L + ++  + P+RG+ 
Sbjct: 65  VKFSMP-SVPDFETLFSQVQLFISTCNGEHIRYATDTFAGLCHQLTNALVERKQPLRGIG 124

Query: 212 PLLTAIRKLQTSSEHLTTLHPEFLLLCLLAKCYKAGRSILDNDILEVDQ------PRDLF 271
            L  AI K+Q ++  LT++H +   LCLLAKC+K     LD D++++ +       +   
Sbjct: 125 ILKQAIDKMQMNTNQLTSVHADLCQLCLLAKCFKPALPYLDVDMMDICKENGAYDAKHFL 184

Query: 272 LYCYYGEMLEFLSLLLDKLRRVVFSFKGEGVRDTIKEDLAKVVTAPMQSMNAIAVEAYKK 331
            Y YYG M   +   L    R ++ ++             + +T P  +++ I +E+YKK
Sbjct: 185 CYYYYGGM---IYTGLKNFERALYFYE-------------QAITTPAMAVSHIMLESYKK 244

Query: 332 YILVSLIYNGQ---------------------PYIELANSYGTGNVEELDTVFQTNKEKF 391
           YILVSLI  G+                      Y ELA  Y T N  EL  +   + E F
Sbjct: 245 YILVSLILLGKVQQLPKYTSQIVGRFIKPLSNAYHELAQVYSTNNPSELRNLVSKHSETF 304

Query: 392 ESDNNLGLVKQAVSSMYKRNIQRLTQTYLTLSLQDIASTVKLNSPKEAEMHVLQMIQDGE 451
             DNN+GLVKQ +SS+YK+NIQRLT+T+LTLSLQD+AS V+L+ P+EAE +VL MI+DGE
Sbjct: 305 TRDNNMGLVKQCLSSLYKKNIQRLTKTFLTLSLQDMASRVQLSGPQEAEKYVLHMIEDGE 364

Query: 452 IFATINQKDGMVRFLEDSEQYKSCKMIEHIDSSIQRIMTLAKKLTAMDENISSDPLYLAK 505
           IFA+INQKDGMV F ++ E+Y +  M+ +ID  + + + L ++L AMD+ I+ +P ++ K
Sbjct: 365 IFASINQKDGMVSFHDNPEKYNNPAMLHNIDQEMLKCIELDERLKAMDQEITVNPQFVQK 423

[Close]

BLAST of HG10018477 vs. ExPASy TrEMBL
Match: A0A1S4DTY7 (COP9 signalosome complex subunit 3 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103485502 PE=4 SV=1)

HSP 1 Score: 701.8 bits (1810), Expect = 2.0e-198
Identity = 372/417 (89.21%), Postives = 381/417 (91.37%), Query Frame = 0


Query: 89  MGTVEVLVAQIQGLSSTAGDISRLHTLLKQSEELLHAETSHLPSTLAQLDASKHSLGYLY 148
           MGTVEVLVAQIQGLS+TAGDISRLHTLLKQSEELLHAETS LPS LAQLDASKHSLGYLY
Sbjct: 1   MGTVEVLVAQIQGLSTTAGDISRLHTLLKQSEELLHAETSRLPSALAQLDASKHSLGYLY 60

Query: 149 ILEACTSVPISQEQTSSIVLTISRFISSCNPEQIRLAPEKFVSVCKRLKDQVILEAPIRG 208
           ILEACTSVPISQEQ+SSI+LTISRFISSCNPEQIRLAPEKFVSVCKR KDQVI EAPIRG
Sbjct: 61  ILEACTSVPISQEQSSSILLTISRFISSCNPEQIRLAPEKFVSVCKRFKDQVIQEAPIRG 120

Query: 209 VAPLLTAIRKLQTSSEHLTTLHPEFLLLCLLAKCYKAGRSILDNDILEVDQPRDLFLYCY 268
           VAPLLTA+RKLQTSSEHLTTLHPEFLLLCLLAK YK GRSILDNDILEVDQPRDLFLYCY
Sbjct: 121 VAPLLTAVRKLQTSSEHLTTLHPEFLLLCLLAKSYKTGRSILDNDILEVDQPRDLFLYCY 180

Query: 269 YGEMLEFLSLLLDKLRRVVFSFKGEGVRDTIKEDLAKVVTAPMQSMNAIAVEAYKKYILV 328
           YG M+     L  K                  E L  VVTAPMQSMNAIAVEAYKKYILV
Sbjct: 181 YGGMICIGLKLFQK----------------ALELLHNVVTAPMQSMNAIAVEAYKKYILV 240

Query: 329 SLIYNGQPYIELANSYGTGNVEELDTVFQTNKEKFESDNNLGLVKQAVSSMYKRNIQRLT 388
           SLIYNGQPYIELANSY TGNVEELDTVFQTN++KFESDNNLGLVKQAVSSMYKRNIQRLT
Sbjct: 241 SLIYNGQPYIELANSYSTGNVEELDTVFQTNRQKFESDNNLGLVKQAVSSMYKRNIQRLT 300

Query: 389 QTYLTLSLQDIASTVKLNSPKEAEMHVLQMIQDGEIFATINQKDGMVRFLEDSEQYKSCK 448
           QTYLTLSLQDIASTVKLNSPKEAEMHVLQMIQDGEIFATINQKDGMVRFLEDSEQYKSC+
Sbjct: 301 QTYLTLSLQDIASTVKLNSPKEAEMHVLQMIQDGEIFATINQKDGMVRFLEDSEQYKSCR 360

Query: 449 MIEHIDSSIQRIMTLAKKLTAMDENISSDPLYLAKAGRERQRFDYDDFDSVPQKFNI 506
           MIEHIDSSIQRIMTL+KKLTAMDENISSDPLYLAKAGRERQRFDYDDFDSVPQKFNI
Sbjct: 361 MIEHIDSSIQRIMTLSKKLTAMDENISSDPLYLAKAGRERQRFDYDDFDSVPQKFNI 401

[Close]

BLAST of HG10018477 vs. ExPASy TrEMBL
Match: A0A0A0KBF0 (PCI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G008050 PE=4 SV=1)

HSP 1 Score: 695.7 bits (1794), Expect = 1.5e-196
Identity = 387/483 (80.12%), Postives = 397/483 (82.19%), Query Frame = 0


Query: 45  DLTRKKGVIDRIEASFQFLLSKIFLLLLLLLLQVLKPEPLFTLTMGTVEVLVAQIQGLSS 104
           D   +    DRIE  FQFLLSKI     + L   + P      TMGTVEVLVAQIQGLSS
Sbjct: 26  DKKERSDRFDRIELPFQFLLSKILFPATVQLQLRIPP------TMGTVEVLVAQIQGLSS 85

Query: 105 TAGDISRLHTLLKQSEELLHAETSHLPSTLAQLDASKHSLGYLYILEACTSVPISQEQTS 164
           TAGDISRLHTLLKQSEELLHAETS LPS LAQLDASKHSLGYLYILEACTSVPISQEQ+S
Sbjct: 86  TAGDISRLHTLLKQSEELLHAETSRLPSALAQLDASKHSLGYLYILEACTSVPISQEQSS 145

Query: 165 SIVLTISRFISSCNPEQIRLAPEKFVSVCKRLKDQVILEAPIRGVAPLLTAIRKLQTSSE 224
           SI+LTISRFIS CNPEQIRLAPEKFVSVCKR KDQVI EAPIRGVAPLLTA+RKLQTSSE
Sbjct: 146 SILLTISRFISCCNPEQIRLAPEKFVSVCKRFKDQVIQEAPIRGVAPLLTAVRKLQTSSE 205

Query: 225 HLTTLHPEFLLLCLLAKCYKAGRSILDNDILEVDQPRDLFLYCYYGEMLEFLSLLLDKLR 284
           HLTTLHPEFLLLCLLAK YK GRSILDNDILEVDQPRDLFLYCYYG M+     L  K  
Sbjct: 206 HLTTLHPEFLLLCLLAKSYKTGRSILDNDILEVDQPRDLFLYCYYGGMICVGLKLFHK-- 265

Query: 285 RVVFSFKGEGVRDTIKEDLAKVVTAPMQSMNAIAVEAYKKYILVSLIYNG---------- 344
                           E L  VVTAPMQSMNAIAVEAYKKYILVSLIYNG          
Sbjct: 266 --------------ALELLHNVVTAPMQSMNAIAVEAYKKYILVSLIYNGQFSTSLPKYT 325

Query: 345 ------------QPYIELANSYGTGNVEELDTVFQTNKEKFESDNNLGLVKQAVSSMYKR 404
                       QPYIELANSY TGNVEELDTVFQTN++KFESDNNLGLVKQAVSSMYKR
Sbjct: 326 SSVAQRNLKNFCQPYIELANSYSTGNVEELDTVFQTNRQKFESDNNLGLVKQAVSSMYKR 385

Query: 405 NIQRLTQTYLTLSLQDIASTVKLNSPKEAEMHVLQMIQDGEIFATINQKDGMVRFLEDSE 464
           NIQRLTQTYLTLSLQDIASTVKLNSPKEAEMHVLQMIQDGEIFATINQKDGMVRFLEDSE
Sbjct: 386 NIQRLTQTYLTLSLQDIASTVKLNSPKEAEMHVLQMIQDGEIFATINQKDGMVRFLEDSE 445

Query: 465 QYKSCKMIEHIDSSIQRIMTLAKKLTAMDENISSDPLYLAKAGRERQRFDYDDFDSVPQK 506
           QYKSC+MIE IDSSIQRIMTL KKLTAMDENISSDPLYLAKAGRERQRFDYDDFDSVPQK
Sbjct: 446 QYKSCRMIERIDSSIQRIMTLTKKLTAMDENISSDPLYLAKAGRERQRFDYDDFDSVPQK 486

[Close]

BLAST of HG10018477 vs. ExPASy TrEMBL
Match: A0A5A7UNF8 (COP9 signalosome complex subunit 3 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold205G00480 PE=4 SV=1)

HSP 1 Score: 689.1 bits (1777), Expect = 1.4e-194
Identity = 372/439 (84.74%), Postives = 381/439 (86.79%), Query Frame = 0


Query: 89  MGTVEVLVAQIQGLSSTAGDISRLHTLLKQSEELLHAETSHLPSTLAQLDASKHSLGYLY 148
           MGTVEVLVAQIQGLS+TAGDISRLHTLLKQSEELLHAETS LPS LAQLDASKHSLGYLY
Sbjct: 1   MGTVEVLVAQIQGLSTTAGDISRLHTLLKQSEELLHAETSRLPSALAQLDASKHSLGYLY 60

Query: 149 ILEACTSVPISQEQTSSIVLTISRFISSCNPEQIRLAPEKFVSVCKRLKDQVILEAPIRG 208
           ILEACTSVPISQEQ+SSI+LTISRFISSCNPEQIRLAPEKFVSVCKR KDQVI EAPIRG
Sbjct: 61  ILEACTSVPISQEQSSSILLTISRFISSCNPEQIRLAPEKFVSVCKRFKDQVIQEAPIRG 120

Query: 209 VAPLLTAIRKLQTSSEHLTTLHPEFLLLCLLAKCYKAGRSILDNDILEVDQPRDLFLYCY 268
           VAPLLTA+RKLQTSSEHLTTLHPEFLLLCLLAK YK GRSILDNDILEVDQPRDLFLYCY
Sbjct: 121 VAPLLTAVRKLQTSSEHLTTLHPEFLLLCLLAKSYKTGRSILDNDILEVDQPRDLFLYCY 180

Query: 269 YGEMLEFLSLLLDKLRRVVFSFKGEGVRDTIKEDLAKVVTAPMQSMNAIAVEAYKKYILV 328
           YG M+     L  K                  E L  VVTAPMQSMNAIAVEAYKKYILV
Sbjct: 181 YGGMICIGLKLFQK----------------ALELLHNVVTAPMQSMNAIAVEAYKKYILV 240

Query: 329 SLIYNG----------------------QPYIELANSYGTGNVEELDTVFQTNKEKFESD 388
           SLIYNG                      QPYIELANSY TGNVEELDTVFQTN++KFESD
Sbjct: 241 SLIYNGQFSTSLPKYTSSVAQRNLKNFCQPYIELANSYSTGNVEELDTVFQTNRQKFESD 300

Query: 389 NNLGLVKQAVSSMYKRNIQRLTQTYLTLSLQDIASTVKLNSPKEAEMHVLQMIQDGEIFA 448
           NNLGLVKQAVSSMYKRNIQRLTQTYLTLSLQDIASTVKLNSPKEAEMHVLQMIQDGEIFA
Sbjct: 301 NNLGLVKQAVSSMYKRNIQRLTQTYLTLSLQDIASTVKLNSPKEAEMHVLQMIQDGEIFA 360

Query: 449 TINQKDGMVRFLEDSEQYKSCKMIEHIDSSIQRIMTLAKKLTAMDENISSDPLYLAKAGR 506
           TINQKDGMVRFLEDSEQYKSC+MIEHIDSSIQRIMTL+KKLTAMDENISSDPLYLAKAGR
Sbjct: 361 TINQKDGMVRFLEDSEQYKSCRMIEHIDSSIQRIMTLSKKLTAMDENISSDPLYLAKAGR 420

[Close]

BLAST of HG10018477 vs. ExPASy TrEMBL
Match: A0A1S3B2T4 (COP9 signalosome complex subunit 3 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103485502 PE=4 SV=1)

HSP 1 Score: 689.1 bits (1777), Expect = 1.4e-194
Identity = 372/439 (84.74%), Postives = 381/439 (86.79%), Query Frame = 0


Query: 89  MGTVEVLVAQIQGLSSTAGDISRLHTLLKQSEELLHAETSHLPSTLAQLDASKHSLGYLY 148
           MGTVEVLVAQIQGLS+TAGDISRLHTLLKQSEELLHAETS LPS LAQLDASKHSLGYLY
Sbjct: 1   MGTVEVLVAQIQGLSTTAGDISRLHTLLKQSEELLHAETSRLPSALAQLDASKHSLGYLY 60

Query: 149 ILEACTSVPISQEQTSSIVLTISRFISSCNPEQIRLAPEKFVSVCKRLKDQVILEAPIRG 208
           ILEACTSVPISQEQ+SSI+LTISRFISSCNPEQIRLAPEKFVSVCKR KDQVI EAPIRG
Sbjct: 61  ILEACTSVPISQEQSSSILLTISRFISSCNPEQIRLAPEKFVSVCKRFKDQVIQEAPIRG 120

Query: 209 VAPLLTAIRKLQTSSEHLTTLHPEFLLLCLLAKCYKAGRSILDNDILEVDQPRDLFLYCY 268
           VAPLLTA+RKLQTSSEHLTTLHPEFLLLCLLAK YK GRSILDNDILEVDQPRDLFLYCY
Sbjct: 121 VAPLLTAVRKLQTSSEHLTTLHPEFLLLCLLAKSYKTGRSILDNDILEVDQPRDLFLYCY 180

Query: 269 YGEMLEFLSLLLDKLRRVVFSFKGEGVRDTIKEDLAKVVTAPMQSMNAIAVEAYKKYILV 328
           YG M+     L  K                  E L  VVTAPMQSMNAIAVEAYKKYILV
Sbjct: 181 YGGMICIGLKLFQK----------------ALELLHNVVTAPMQSMNAIAVEAYKKYILV 240

Query: 329 SLIYNG----------------------QPYIELANSYGTGNVEELDTVFQTNKEKFESD 388
           SLIYNG                      QPYIELANSY TGNVEELDTVFQTN++KFESD
Sbjct: 241 SLIYNGQFSTSLPKYTSSVAQRNLKNFCQPYIELANSYSTGNVEELDTVFQTNRQKFESD 300

Query: 389 NNLGLVKQAVSSMYKRNIQRLTQTYLTLSLQDIASTVKLNSPKEAEMHVLQMIQDGEIFA 448
           NNLGLVKQAVSSMYKRNIQRLTQTYLTLSLQDIASTVKLNSPKEAEMHVLQMIQDGEIFA
Sbjct: 301 NNLGLVKQAVSSMYKRNIQRLTQTYLTLSLQDIASTVKLNSPKEAEMHVLQMIQDGEIFA 360

Query: 449 TINQKDGMVRFLEDSEQYKSCKMIEHIDSSIQRIMTLAKKLTAMDENISSDPLYLAKAGR 506
           TINQKDGMVRFLEDSEQYKSC+MIEHIDSSIQRIMTL+KKLTAMDENISSDPLYLAKAGR
Sbjct: 361 TINQKDGMVRFLEDSEQYKSCRMIEHIDSSIQRIMTLSKKLTAMDENISSDPLYLAKAGR 420

[Close]

BLAST of HG10018477 vs. ExPASy TrEMBL
Match: A0A6J1JY07 (COP9 signalosome complex subunit 3-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111488907 PE=4 SV=1)

HSP 1 Score: 673.7 bits (1737), Expect = 6.0e-190
Identity = 361/439 (82.23%), Postives = 380/439 (86.56%), Query Frame = 0


Query: 89  MGTVEVLVAQIQGLSSTAGDISRLHTLLKQSEELLHAETSHLPSTLAQLDASKHSLGYLY 148
           M TVEVLVAQIQGLSSTAGDISRLHTLLKQSEELLHA+T+ LPS LAQLDAS+HSLGYL+
Sbjct: 1   MATVEVLVAQIQGLSSTAGDISRLHTLLKQSEELLHADTARLPSALAQLDASEHSLGYLF 60

Query: 149 ILEACTSVPISQEQTSSIVLTISRFISSCNPEQIRLAPEKFVSVCKRLKDQVILEAPIRG 208
           ILEACTSVPISQ+Q+SSI+LTISRFISSCN +QIRLAPEKF SVCKR KDQV+LEAPIRG
Sbjct: 61  ILEACTSVPISQDQSSSIILTISRFISSCNQDQIRLAPEKFASVCKRFKDQVMLEAPIRG 120

Query: 209 VAPLLTAIRKLQTSSEHLTTLHPEFLLLCLLAKCYKAGRSILDNDILEVDQPRDLFLYCY 268
           VAPLLTAIRKLQTSSEHLT+LHP+FLLLCLLAKCYK GRSILDNDILEVDQPRDLFLYCY
Sbjct: 121 VAPLLTAIRKLQTSSEHLTSLHPDFLLLCLLAKCYKTGRSILDNDILEVDQPRDLFLYCY 180

Query: 269 YGEMLEFLSLLLDKLRRVVFSFKGEGVRDTIKEDLAKVVTAPMQSMNAIAVEAYKKYILV 328
           YG M+     L  K                  E L  VVTAPM S+NAIAVEAYKKYIL+
Sbjct: 181 YGGMICIGLKLFHK----------------ALELLHNVVTAPMPSLNAIAVEAYKKYILL 240

Query: 329 SLIYNG----------------------QPYIELANSYGTGNVEELDTVFQTNKEKFESD 388
           SLIYNG                      QPYIELANSYGTGNV+ELDTVFQTN+EKFESD
Sbjct: 241 SLIYNGQFSSSLPKYTSSVAQRNLKNFCQPYIELANSYGTGNVDELDTVFQTNREKFESD 300

Query: 389 NNLGLVKQAVSSMYKRNIQRLTQTYLTLSLQDIASTVKLNSPKEAEMHVLQMIQDGEIFA 448
           NNLGLVKQAVSS+YKRNIQRLTQTYLTLSLQDIA+TVKLNSPKEAEMHVLQMIQDGEIFA
Sbjct: 301 NNLGLVKQAVSSLYKRNIQRLTQTYLTLSLQDIANTVKLNSPKEAEMHVLQMIQDGEIFA 360

Query: 449 TINQKDGMVRFLEDSEQYKSCKMIEHIDSSIQRIMTLAKKLTAMDENISSDPLYLAKAGR 506
           TINQKDGMVRFLEDSEQYKSCKMIE+IDSSIQRIMTLAKKLTAMDENISSDPLYLAKAGR
Sbjct: 361 TINQKDGMVRFLEDSEQYKSCKMIENIDSSIQRIMTLAKKLTAMDENISSDPLYLAKAGR 420

[Close]

BLAST of HG10018477 vs. TAIR 10
Match: AT5G14250.1 (Proteasome component (PCI) domain protein )

HSP 1 Score: 442.2 bits (1136), Expect = 5.6e-124
Identity = 251/441 (56.92%), Postives = 308/441 (69.84%), Query Frame = 0


Query: 89  MGTVEVLVAQIQGLSSTAGDISRLHTLLKQSEELLHAETSHLPSTLAQLDASKHSLGYLY 148
           + +VE ++  IQGLS +  D+S LH LL+ +++ L AE     STL QLDASKHSLGYLY
Sbjct: 5   VNSVEAVITSIQGLSGSPEDLSALHDLLRGAQDSLRAEPGVNFSTLDQLDASKHSLGYLY 64

Query: 149 ILEACTSVPISQEQTSSIVLTISRFISSCNPEQIRLAPEKFVSVCKRLKDQVI-LEAPIR 208
            LE  T  P+S+E+ +  +  I+RFI+SC+  QIRLA  KFVS+CK LKD VI L  P+R
Sbjct: 65  FLEVLTCGPVSKEKAAYEIPIIARFINSCDAGQIRLASYKFVSLCKILKDHVIALGDPLR 124

Query: 209 GVAPLLTAIRKLQTSSEHLTTLHPEFLLLCLLAKCYKAGRSILDNDILEVDQPRDLFLYC 268
           GV PLL A++KLQ SS+ LT LHP+ L LCL AK YK+G SIL +DI+E+DQPRD FLY 
Sbjct: 125 GVGPLLNAVQKLQVSSKRLTALHPDVLQLCLQAKSYKSGFSILSDDIVEIDQPRDFFLYS 184

Query: 269 YYGEMLEFLSLLLDKLRRVVFSFKGEGVRDTIKEDLAKVVTAPMQSMNAIAVEAYKKYIL 328
           YYG M   + + L + ++ +             E L  VVTAPM  +NAIA+EAYKKYIL
Sbjct: 185 YYGGM---ICIGLKRFQKAL-------------ELLYNVVTAPMHQVNAIALEAYKKYIL 244

Query: 329 VSLIYNGQ----------------------PYIELANSYGTGNVEELDTVFQTNKEKFES 388
           VSLI+NGQ                      PYIEL N Y  G + EL+ +      +FE 
Sbjct: 245 VSLIHNGQFTNTLPKCASTAAQRSFKNYTGPYIELGNCYNDGKIGELEALVVARNAEFEE 304

Query: 389 DNNLGLVKQAVSSMYKRNIQRLTQTYLTLSLQDIASTVKLNSPKEAEMHVLQMIQDGEIF 448
           D NLGLVKQAVSS+YKRNI RLTQ YLTLSLQDIA+ V+L + KEAEMHVLQMIQDG+I 
Sbjct: 305 DKNLGLVKQAVSSLYKRNILRLTQKYLTLSLQDIANMVQLGNAKEAEMHVLQMIQDGQIH 364

Query: 449 ATINQKDGMVRFLEDSEQYKSCKMIEHIDSSIQRIMTLAKKLTAMDENISSDPLYLAKAG 506
           A INQKDGMVRFLED EQYKS +MIE +DS IQR + L+K L AMDE++S DPLYL K G
Sbjct: 365 ALINQKDGMVRFLEDPEQYKSSEMIEIMDSVIQRTIGLSKNLLAMDESLSCDPLYLGKVG 424

[Close]

BLAST of HG10018477 vs. TAIR 10
Match: AT5G14250.2 (Proteasome component (PCI) domain protein )

HSP 1 Score: 324.3 bits (830), Expect = 1.7e-88
Identity = 189/354 (53.39%), Postives = 235/354 (66.38%), Query Frame = 0


Query: 89  MGTVEVLVAQIQGLSSTAGDISRLHTLLKQSEELLHAETSHLPSTLAQLDASKHSLGYLY 148
           + +VE ++  IQGLS +  D+S LH LL+ +++ L AE     STL QLDASKHSLGYLY
Sbjct: 5   VNSVEAVITSIQGLSGSPEDLSALHDLLRGAQDSLRAEPGVNFSTLDQLDASKHSLGYLY 64

Query: 149 ILEACTSVPISQEQTSSIVLTISRFISSCNPEQIRLAPEKFVSVCKRLKDQVI-LEAPIR 208
            LE  T  P+S+E+ +  +  I+RFI+SC+  QIRLA  KFVS+CK LKD VI L  P+R
Sbjct: 65  FLEVLTCGPVSKEKAAYEIPIIARFINSCDAGQIRLASYKFVSLCKILKDHVIALGDPLR 124

Query: 209 GVAPLLTAIRKLQTSSEHLTTLHPEFLLLCLLAKCYKAGRSILDNDILEVDQPRDLFLYC 268
           GV PLL A++KLQ SS+ LT LHP+ L LCL AK YK+G SIL +DI+E+DQPRD FLY 
Sbjct: 125 GVGPLLNAVQKLQVSSKRLTALHPDVLQLCLQAKSYKSGFSILSDDIVEIDQPRDFFLYS 184

Query: 269 YYGEMLEFLSLLLDKLRRVVFSFKGEGVRDTIKEDLAKVVTAPMQSMNAIAVEAYKKYIL 328
           YYG M   + + L + ++ +             E L  VVTAPM  +NAIA+EAYKKYIL
Sbjct: 185 YYGGM---ICIGLKRFQKAL-------------ELLYNVVTAPMHQVNAIALEAYKKYIL 244

Query: 329 VSLIYNGQ----------------------PYIELANSYGTGNVEELDTVFQTNKEKFES 388
           VSLI+NGQ                      PYIEL N Y  G + EL+ +      +FE 
Sbjct: 245 VSLIHNGQFTNTLPKCASTAAQRSFKNYTGPYIELGNCYNDGKIGELEALVVARNAEFEE 304

Query: 389 DNNLGLVKQAVSSMYKRNIQRLTQTYLTLSLQDIASTVKLNSPKEAEMHVLQMI 420
           D NLGLVKQAVSS+YKRNI RLTQ YLTLSLQDIA+ V+L + KEAEMHVLQM+
Sbjct: 305 DKNLGLVKQAVSSLYKRNILRLTQKYLTLSLQDIANMVQLGNAKEAEMHVLQMV 342

[Close]

BLAST of HG10018477 vs. TAIR 10
Match: AT1G75990.1 (PAM domain (PCI/PINT associated module) protein )

HSP 1 Score: 55.1 bits (131), Expect = 1.9e-07
Identity = 33/115 (28.70%), Postives = 62/115 (53.91%), Query Frame = 0


Query: 335 QPYIELANSYGTGNVEELDTVFQTNKEKFESDNNLGLVKQAVSSMYKRNIQRLTQTYLTL 394
           +PY EL N+   G++E    + +   + F  D    L+ +   ++ +  ++ ++ +Y  +
Sbjct: 310 RPYFELTNAVRIGDLELFGKIQEKFAKTFAEDRTHNLIVRLRHNVIRTGLRNISISYSRI 369

Query: 395 SLQDIASTVKLNSPK---EAEMHVLQMIQDGEIFATINQKDGMVRFLEDSEQYKS 447
           SLQD+A  ++LNS     +AE  V + I+DG I ATI+ K+G +   E  + Y +
Sbjct: 370 SLQDVAQKLRLNSANPVADAESIVAKAIRDGAIDATIDHKNGCMVSKETGDIYST 424

[Close]

BLAST of HG10018477 vs. TAIR 10
Match: AT1G20200.1 (PAM domain (PCI/PINT associated module) protein )

HSP 1 Score: 55.1 bits (131), Expect = 1.9e-07
Identity = 34/115 (29.57%), Postives = 62/115 (53.91%), Query Frame = 0


Query: 335 QPYIELANSYGTGNVEELDTVFQTNKEKFESDNNLGLVKQAVSSMYKRNIQRLTQTYLTL 394
           +PY EL N+   G++E   TV +   + F  D    L+ +   ++ +  ++ ++ +Y  +
Sbjct: 311 RPYFELTNAVRIGDLELFRTVQEKFLDTFAQDRTHNLIVRLRHNVIRTGLRNISISYSRI 370

Query: 395 SLQDIASTVKLNSPK---EAEMHVLQMIQDGEIFATINQKDGMVRFLEDSEQYKS 447
           SL D+A  ++LNS     +AE  V + I+DG I ATI+ K+G +   E  + Y +
Sbjct: 371 SLPDVAKKLRLNSENPVADAESIVAKAIRDGAIDATIDHKNGCMVSKETGDIYST 425

The following BLAST results are available for this feature:

BLAST of HG10018477 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016899451.1	4.2e-198	89.21	PREDICTED: COP9 signalosome complex subunit 3 isoform X2 [Cucumis melo]	[more]
XP_038886130.1	3.6e-197	86.10	COP9 signalosome complex subunit 3 [Benincasa hispida]	[more]
XP_004138469.2	3.0e-196	80.12	COP9 signalosome complex subunit 3 [Cucumis sativus] >KGN45722.1 hypothetical pr...	[more]
XP_008441368.1	2.8e-194	84.74	PREDICTED: COP9 signalosome complex subunit 3 isoform X1 [Cucumis melo] >KAA0056...	[more]
XP_022992614.1	1.2e-189	82.23	COP9 signalosome complex subunit 3-like isoform X1 [Cucurbita maxima]	[more]

BLAST of HG10018477 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8W575	7.9e-123	56.92	COP9 signalosome complex subunit 3 OS=Arabidopsis thaliana OX=3702 GN=CSN3 PE=1 ...	[more]
Q9UNS2	3.6e-67	36.73	COP9 signalosome complex subunit 3 OS=Homo sapiens OX=9606 GN=COPS3 PE=1 SV=3	[more]
Q4R898	3.6e-67	36.73	COP9 signalosome complex subunit 3 OS=Macaca fascicularis OX=9541 GN=COPS3 PE=2 ...	[more]
Q5RFS2	3.6e-67	36.73	COP9 signalosome complex subunit 3 OS=Pongo abelii OX=9601 GN=COPS3 PE=2 SV=1	[more]
O88543	4.7e-67	36.73	COP9 signalosome complex subunit 3 OS=Mus musculus OX=10090 GN=Cops3 PE=1 SV=3	[more]

BLAST of HG10018477 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4DTY7	2.0e-198	89.21	COP9 signalosome complex subunit 3 isoform X2 OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
A0A0A0KBF0	1.5e-196	80.12	PCI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G008050 PE=4 SV...	[more]
A0A5A7UNF8	1.4e-194	84.74	COP9 signalosome complex subunit 3 isoform X1 OS=Cucumis melo var. makuwa OX=119...	[more]
A0A1S3B2T4	1.4e-194	84.74	COP9 signalosome complex subunit 3 isoform X1 OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
A0A6J1JY07	6.0e-190	82.23	COP9 signalosome complex subunit 3-like isoform X1 OS=Cucurbita maxima OX=3661 G...	[more]

BLAST of HG10018477 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G14250.1	5.6e-124	56.92	Proteasome component (PCI) domain protein	[more]
AT5G14250.2	1.7e-88	53.39	Proteasome component (PCI) domain protein	[more]
AT1G75990.1	1.9e-07	28.70	PAM domain (PCI/PINT associated module) protein	[more]
AT1G20200.1	1.9e-07	29.57	PAM domain (PCI/PINT associated module) protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SMART	SM00753	PINT	coord: 370..460 e-value: 1.2E-21 score: 87.9
None	No IPR available	GENE3D	1.25.40.570		coord: 336..468 e-value: 6.3E-9 score: 37.3
None	No IPR available	PANTHER	PTHR10758:SF14	COP9 SIGNALOSOME COMPLEX SUBUNIT 3-LIKE ISOFORM X1	coord: 336..500
None	No IPR available	PANTHER	PTHR10758:SF14	COP9 SIGNALOSOME COMPLEX SUBUNIT 3-LIKE ISOFORM X1	coord: 88..335
None	No IPR available	PANTHER	PTHR10758	26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 3/COP9 SIGNALOSOME COMPLEX SUBUNIT 3	coord: 336..500
None	No IPR available	PANTHER	PTHR10758	26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 3/COP9 SIGNALOSOME COMPLEX SUBUNIT 3	coord: 88..335
IPR000717	Proteasome component (PCI) domain	SMART	SM00088	PINT_4	coord: 370..460 e-value: 1.2E-21 score: 87.9
IPR000717	Proteasome component (PCI) domain	PFAM	PF01399	PCI	coord: 336..437 e-value: 1.8E-17 score: 63.7
IPR000717	Proteasome component (PCI) domain	PROSITE	PS50250	PCI	coord: 264..442 score: 21.514828
IPR036390	Winged helix DNA-binding domain superfamily	SUPERFAMILY	46785	"Winged helix" DNA-binding domain	coord: 373..445

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10018477.1	HG10018477.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010971	positive regulation of G2/M transition of mitotic cell cycle
biological_process	GO:0000338	protein deneddylation
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0003677	DNA binding