HG10018392 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10018392
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionHeavy metal transport/detoxification superfamily protein
LocationChr04: 3705162 .. 3711238 (+)
RNA-Seq ExpressionHG10018392
SyntenyHG10018392
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTAAAAGCAAAGAATTATTCTTTTTGGTAGAGAAGAAGAGTATTTTTGGGCCATGTGAACATAATTTAATGGTAAGAGTAGTTATGCCTTTCATATGAATTCAAATTAGCTCAAATTTACCTTCTTTCTCTTTTTTTTACGTTTAGGGACAATTTGTTTATTAGAAATGTAGATAATCGGAATCTTAGATGCTCCGAATTATAGATATATGAAATTATAAATGTCTGACATCTTTAGATAACTATGTTTGTTTTGTATCAATATTTTTGCAGATATCTGAAAATATTTTCATAATTGTATTCGTTTCGTAAGAATTCTACTGGCGAATGTCTTAAATTGATATGATGTTCCAAGATTGCCCTTATGACTATTTATTAATATATAATTAATATGATATAATTTGAACTTATATAACGTATTTATTTTTATCAATTTGAATTTCTTTTTAAATATATACAATTTATATTATTTTTATATGTTATTTTTCTCAACAAAATACTATCTCATAATTTAATCTTTTTTCTAAAATAAATATTAATTTGAATATCTTGCTAAAAGATAATAAAAATTACGATATAACAAAAAAATATGATATATATGATTGACTGTATTTATTTTAATTATATAATACAAATGAAGATTAATATATACGTAAAATTAAAAAAAGAAGGAAGGACAAAAATGTAAAATGGGTATGCATTTAACTTGGAAATTTAGAAAACCCATGTTGGCATCAAAATTCTTGAGATGCCCTCCATAAGAACATTCTAGGATGTCCAAGAATCTCCATATGCTAGGACATCTTATAATACCACAGAGCAAACACGATAATTCATATAGCTCACTTCGTGAAAATCGAGAATACCCCCAAAACAAATAGTCTCTTATTGTATTAAAAATAGTTTGCACCTTACTATCCTCAAACAATTCTCAAACATTCATAATGTGAGAGAATAGTTTAGATTTAAGATAATTTTTTTCTTAAAAATATATCATTATATATATTGACTAACTATTAAATATATTTAATTAAGTTTTTCCAATAGAGAAGAATTAAGATTTAAGATTAAAAAAAAAACTAATTAATTCTGGACACAGTTCAACTATGAAAGGTATTTGTAACTTGTAAGTGATATTATATTTATAAAAGACAAAAAAAAAAAAAAAGTTTATTTGGAAGGTATAAATAATCAAAGCTGCTGCTGATTCATATAGCACTAAGATTTCTTTATTTTTATTAATTTTTTAAGAATAGTGTTACAGCACTTTGTCAATCAAATTAGTTAAAAACCAAAGTAAGGCTGAACTGGTTACCACTAACAATTTAACATTATTAAGAAAATTAGAAGCCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGTAACTATATATTATGTTATTATACTATAATATTGATGGTGAATGGGTGATAATATCTTATAGAATGCAACTTTTTTTTAAAACTTAGGATTTTACAATTTTTTGTGCGGTCGTCAATCAGCTACATTTCATTACGTATTTTCCTTTGAATTATTTTTATTACTATTATTCATATGCTAATTTAGCCTTAAATATTTTTTGTATTTATATGTTCTAGTATTTAATAGATTTTCAAACAATTTAATTGTATGTCTAATAATTATATATATTTCCATCTTTCCCTCACCTAAAATGGAGAAAACACCGACCTCATTGAAAGTTTGGCCATAGAAAGTCAATAGGATTGGGAACTATTATTTACTTTTAAAAATATCTTTTCATATTTTATTATCTGCATTATTTCTTTTAGAACACAATAAAGGTAGTTTTTCTTGAAAAATGTATGGTGGTAATTACATCGACACGTTTTAGAAAGAAATCCAATCAATTTTTAAAAACAACCCCACCAAAAACTTTCAAACAATTATTATTTTTAAAACAACTATTATTGTGCAAAAAGGATATTGAAATTATGATCAACCTTTTAATCATTCTCCATCACAATATTTTATATTTTGGATTATAAAAAATAGAGTGAGAGTTCCATCCGTGAAATTGAGAGATTCTAATCTAATTCTTATTTTTGACCAAGATTGTTTCAAAAAAGAATATAAACTACCTTTATTTAAGAATAAATAAATTGGAATATGAACTCCTTTTAATATAAAAGAATTAAATATAGTAACATGATTTTGTTTCACATCTTAAATAATCTCTTGGTATATACATTTAAAAGAGAATTTAAAATAAATTATTGGTGCAAAGTAGTATGAGATTGAGGCCATTTTGATAAGAATCAAATAAACCAAATATTATTCTTTAATAAAAAGTATACCATAATTAGCTTAATATAACATTTATCCAAAATCTCATCCTTAATTAGATCAATATGTGGAATACAGGAGACCATATTTGGCCCACTTAAATAAAAGTCATAAGCACAACTTGAGAATTAATTTTCAGCATAAGAATCTAAACCCATATGCATTTTCCATCAAGCATACTCTGAATTTTGGTATTTACAATCAGAAAGAATATCAAACACAGCATCAAATATAAAAATCTAAGTTTTATAGACAATTTAGAGCGATGTGTTTAGGAGTGTTAAAAAAAATCGATAATCGAAAAATCCGATCAACCCAACCCAACCCGTATGATTTGGGTTAGATTATCAACTCATTTGAATTGGGGTTGGGTTCAAATAAATGAAAATGTTATGAGTTTGTGAGGTTCATAAGTTCACCTAAAATAACCCGAACCAACTCAAACTTATTATTAATTTTAAAATGTATATCTTTTTATTTATGATAAAATTATAAATACGTATATTTATTTTAGTTTTATTTAATTTCATGTTTTTTTGGGATAATTTTTTCTCCAACAACTCTTAAAAATAATTTTTGAGTACTTTGGAAAGAAAATTTTCATAATATAAATTGAAATTGAGTGGTTAATTCTAATTCAATTATGAAAATAATTAAATAAATTTTTTACATCTTAAAATTTTACTTCTTTTTTAGAACAATAATTTAAATAAATGACTCAAGTAACTCGAACCAACTAAACTCAAATGTTTTATAGTTGGGTTGGGTTCATTTTTTAATAAGAGTTATTTGGATTGAAGAAATTTTCGATCCGAACAAATTGGATTGTGTAAAAAAAAGTACTCCTTCATTCTAACTTAACTCAACTCACAAACACTCGTAAGACATTTTATTGAGAAAATATAACCTCCAAAATGTCTATTGATAACATAAAACACGCATTCATATGTGAATATCTATTAGGAATTGAGATTTAGCTCTTTAGTCCTTTCAAGTTAAATCAAGCACTTTCTTGAGATATTTTTTTAAAAAATATCAAAAGTCTTTCTCTGAACTGTATATAGATTATAGTGATTGAAAATTACACGGAAATGAATGTTATCTTTTTGATAAAAAGAAAATTGCTGCAAATTATTGGTGTTATTTTGGAGCTTGTGAATATATCCCATCATCAAGAGGGCCATTTAGATGGGGATTTTGTTGCTTTTCATTGAATTTTATTTAGTTAATTGTTTTTTCTGACTCTAACCTGGTGTGCTGTCATTTTCATGTGTTTGTTTCTGTTTTTCTAGCAGTATTTTTTTTAAAAAAAATATCTCATTCTAATCCAACCTCATTTCTTTGTTTGGTGGGAAGGAAATTATTTGTTTTCAGAAAAGCATTCAGTGTATTTGGTTGTATTTTGATTTAACCCATAATTTTGTCTATCCATTTGCCATACCCTCCTATTTTTAGTTAATAATCAGGAAATGTTTTTAAAATTAGTTGTAAAATATTGTGATATATACACACATATACATTGTACATATATACTAAGATTGTTTAAAAAGCTAAAAACAGGCCTTTTTTTAAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTGCAGTAGCTAGCCTGGATCAGCAGCCTAAAGCATCATTGAAAATTTATTTATATTTTCTGTTTAATATTCTGAACTTTTAAAAATATCAAGTTGCTAGAACAATATTTATCTTTTAGCAGTTAGGTATAGGAATTTGTCTGAGGTTATAGTACCTCACAAATCATTGCATATGCATACTTGAATCAACATGTGATCAATAATATAATGTCTTTCAGGTTAGTGAGAATTTGAGAATTATTTTAAGCATGTTATATGCATATGCAAAATACTTTTAAATTAACATTTCCCTTATTTTAAGAGATTTCATTTATTTTTTTTCATATTCCTAGCTGAAAAACGATCTGTATATATGTCAAATATGCTAGAGAACGTAAATATACATTGCATATACGATATACCATGATTTATTTTTTTTAGTGTGTTTACAAATGTACTAAAAAAAATTAAATATTCATTTCATATATTATTTAGTATATAAGACGATATTTTATACGAATCGTCTTGTTCATGCACTTATCAAATATATCATCTATTTCTAGAAAATTTAAATATATACCGAATGTATTGTGAAATATACTTTGTTATCTCAATTTTCAATTTTTTTTTGAAAAAGAACTTTCTTTATTTGTGTAGGTTTTGAAATAACTGTTTTGAGAAATTTGTGAAAAACTTCTCTTTTAACAATTAAATGGGCCTACATGCGTCTTAGGCCAGACTTTGTGTAAAATAATAACCTATTATGCTATATTGAGAAGAAAATCGTTTTAGAAAGTTCATAACAAGAAACTTTCCTTACATGCTTCTTTTAATATTTATAATATTATATATATTCTTTAAAAAAAATTAATGGTAAGCATGGCTGAAAAAGTAAATTATGTCATACTTTTGTATAACATGATAGTAAAAAAAGAAAATTTAGACAATTATGTAATTAAACCTATTTATTTAGACCATATGTAGAAAGCTAAAAAAAAAAAGAAAATTAGACAATGATACAATTTTGGACCTAATATTTAGGGAAGCCTTTTAACAATTTACAGTTGAGCATAAATGGACCAAGCCCATATTAAAACTAAATTAAATGGGCCTAAATTTGTGTGCCTTTTGCTGCTGTGACTATCCAGGTCCATCCAACCCACCTTGTCGTTAATATCAATAAAAATAAGAATTTTTGTAAATCAAAAATCAAAATATTCCATTACATTATTATTTTAAAAAATTAAGAACTTTAGATAGTGTCTGTCTTTATCCAACTATACATTTGTGTGTGATAAAATCAATAATAATAATAATAAAAGTAAAAATGAAAGATATTTTCAGGGACAGTAGGCCATATTAATATTAACGACAAAAGTGGAGTGGATACCGAAAGTGCAATGTAGGGGACATAATTCAGAAATGGGCATGCCTAAAAAAAAAGCCAGCTAACTAAAAATGATATTATTTCCACTGATTCTATTATTCTTAAATCAAGAATCTCACCTTTTTGAGGTGAAATGCATTCAATCAAAATCCCCCAAATGAATCCAATTCCTTCTTTTTTACTTTCCCTCTATGAACACATAAATTCTTTGCTTCAGTCTGTCATCTGTTGAATCTTAATCAAAACACTTCACGTTATTTGTATCATCATCCCCAAACTACTTCCACTTGAAGAAAGAGAAACCCTTTTATTTCCTTAACACTCTCCTCAAGATTTTTGCACTTGAGTCAGGAATTTGATCAGTCAGAATGACTAATGCAAGTATTTCTGAGAGAAATTCTTGGAATTTGATTTCTTAGTCCTAATGGGTTTTGTTTTCTGGCAATAGGTGGTGGAATTGAAGGTCTTTTTGCATTGTGAGGAGTGCATCAAGAAGATTCTCAAAGCCATCAAGAAAATCCAAGGTTTGTGTTCAATGTCTTGATCAAATTCTGCTCCTATGGTTTTAAGTTTAATAATCTTCAAAACAATTGAGTAAATAATTTGGGGGTTTTTTTTTTTAATTTTCTTTTCTATTGGCAGATATAGAGACATATAATGTAGATATACAGCTGAACAAGGTGACTGTTACAGGCAATGTCACTCAAGAAGAAGTCATCAAAGTTCTTCAGAAAATTAGGAAAACTGCAATTCCATGGCAAGCTGATGAAGCCAACAACATTAATTACTAG

mRNA sequence

ATGGTTAAAAGCAAAGAATTATTCTTTTTGGTAGAGAAGAAGAGTATTTTTGGGCCATGTGAACATAATTTAATGGTGGTGGAATTGAAGGTCTTTTTGCATTGTGAGGAGTGCATCAAGAAGATTCTCAAAGCCATCAAGAAAATCCAAGATATAGAGACATATAATGTAGATATACAGCTGAACAAGGTGACTGTTACAGGCAATGTCACTCAAGAAGAAGTCATCAAAGTTCTTCAGAAAATTAGGAAAACTGCAATTCCATGGCAAGCTGATGAAGCCAACAACATTAATTACTAG

Coding sequence (CDS)

ATGGTTAAAAGCAAAGAATTATTCTTTTTGGTAGAGAAGAAGAGTATTTTTGGGCCATGTGAACATAATTTAATGGTGGTGGAATTGAAGGTCTTTTTGCATTGTGAGGAGTGCATCAAGAAGATTCTCAAAGCCATCAAGAAAATCCAAGATATAGAGACATATAATGTAGATATACAGCTGAACAAGGTGACTGTTACAGGCAATGTCACTCAAGAAGAAGTCATCAAAGTTCTTCAGAAAATTAGGAAAACTGCAATTCCATGGCAAGCTGATGAAGCCAACAACATTAATTACTAG

Protein sequence

MVKSKELFFLVEKKSIFGPCEHNLMVVELKVFLHCEECIKKILKAIKKIQDIETYNVDIQLNKVTVTGNVTQEEVIKVLQKIRKTAIPWQADEANNINY
Homology
[Close]
BLAST of HG10018392 vs. NCBI nr
Match: XP_004138408.1 (protein SODIUM POTASSIUM ROOT DEFECTIVE 2 [Cucumis sativus])

HSP 1 Score: 134.4 bits (337), Expect = 5.3e-28
Identity = 67/74 (90.54%), Postives = 70/74 (94.59%), Query Frame = 0 

Query: 26  VVELKVFLHCEECIKKILKAIKKIQDIETYNVDIQLNKVTVTGNVTQEEVIKVLQKIRKT 85
           VVELKVFLHCEECIKKILKAIKKIQDIETYNVD+++NKV VTGNVT EEVIKVLQKIRKT
Sbjct: 4   VVELKVFLHCEECIKKILKAIKKIQDIETYNVDMEMNKVIVTGNVTNEEVIKVLQKIRKT 63

Query: 86  AIPWQADEANNINY 100
           AIPWQ DE NNINY
Sbjct: 64  AIPWQDDELNNINY 77

[Close]
BLAST of HG10018392 vs. NCBI nr
Match: KAE8646572.1 (hypothetical protein Csa_004951, partial [Cucumis sativus])

HSP 1 Score: 134.4 bits (337), Expect = 5.3e-28
Identity = 67/74 (90.54%), Postives = 70/74 (94.59%), Query Frame = 0 

Query: 26  VVELKVFLHCEECIKKILKAIKKIQDIETYNVDIQLNKVTVTGNVTQEEVIKVLQKIRKT 85
           VVELKVFLHCEECIKKILKAIKKIQDIETYNVD+++NKV VTGNVT EEVIKVLQKIRKT
Sbjct: 1   VVELKVFLHCEECIKKILKAIKKIQDIETYNVDMEMNKVIVTGNVTNEEVIKVLQKIRKT 60

Query: 86  AIPWQADEANNINY 100
           AIPWQ DE NNINY
Sbjct: 61  AIPWQDDELNNINY 74

[Close]
BLAST of HG10018392 vs. NCBI nr
Match: XP_038884077.1 (copper transport protein ATX1 [Benincasa hispida])

HSP 1 Score: 129.4 bits (324), Expect = 1.7e-26
Identity = 65/73 (89.04%), Postives = 70/73 (95.89%), Query Frame = 0 

Query: 26 VVELKVFLHCEECIKKILKAIKKIQDIETYNVDIQLNKVTVTGNVTQEEVIKVLQKIRKT 85
          VVELKVFLHCEECIKKILKAIKKIQDIETYNVD+++NKV VTGNVT+EEVIKVLQKIRKT
Sbjct: 4  VVELKVFLHCEECIKKILKAIKKIQDIETYNVDMEMNKVIVTGNVTKEEVIKVLQKIRKT 63

Query: 86 AIPWQADEANNIN 99
          AIPWQAD  NNI+
Sbjct: 64 AIPWQADGLNNID 76

[Close]
BLAST of HG10018392 vs. NCBI nr
Match: KAA0052042.1 (superoxide dismutase 1 copper chaperone [Cucumis melo var. makuwa] >TYK04519.1 superoxide dismutase 1 copper chaperone [Cucumis melo var. makuwa])

HSP 1 Score: 128.3 bits (321), Expect = 3.8e-26
Identity = 63/74 (85.14%), Postives = 69/74 (93.24%), Query Frame = 0 

Query: 24 LMVVELKVFLHCEECIKKILKAIKKIQDIETYNVDIQLNKVTVTGNVTQEEVIKVLQKIR 83
          + VVELKVFLHC+ECIKKILKAIKKIQDIETYNVD+++NKV VTGNVT EEVIKVLQKIR
Sbjct: 1  MQVVELKVFLHCDECIKKILKAIKKIQDIETYNVDMEMNKVIVTGNVTNEEVIKVLQKIR 60

Query: 84 KTAIPWQADEANNI 98
          KTA+PWQ DE NNI
Sbjct: 61 KTAVPWQDDELNNI 74

[Close]
BLAST of HG10018392 vs. NCBI nr
Match: XP_008456748.1 (PREDICTED: superoxide dismutase 1 copper chaperone [Cucumis melo])

HSP 1 Score: 127.9 bits (320), Expect = 4.9e-26
Identity = 63/72 (87.50%), Postives = 68/72 (94.44%), Query Frame = 0 

Query: 26 VVELKVFLHCEECIKKILKAIKKIQDIETYNVDIQLNKVTVTGNVTQEEVIKVLQKIRKT 85
          VVELKVFLHC+ECIKKILKAIKKIQDIETYNVD+++NKV VTGNVT EEVIKVLQKIRKT
Sbjct: 4  VVELKVFLHCDECIKKILKAIKKIQDIETYNVDMEMNKVIVTGNVTNEEVIKVLQKIRKT 63

Query: 86 AIPWQADEANNI 98
          A+PWQ DE NNI
Sbjct: 64 AVPWQDDELNNI 75

[Close]
BLAST of HG10018392 vs. ExPASy Swiss-Prot
Match: Q84J88 (Heavy metal-associated isoprenylated plant protein 36 OS=Arabidopsis thaliana OX=3702 GN=HIPP36 PE=1 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 2.2e-08
Identity = 31/70 (44.29%), Postives = 42/70 (60.00%), Query Frame = 0 

Query: 29  LKVFLHCEECIKKILKAIKKIQDIETYNVDIQLNKVTVTGNVTQEEVIKVLQKIRKTAIP 88
           L+V +HCE C +KI K + KI  + T N+D++  KVTV GNV  E +IK + K  + A  
Sbjct: 34  LRVSIHCEGCKRKIKKILSKIDGVYTTNIDVKQQKVTVIGNVEPEILIKKIMKAGRHAEL 93

Query: 89  WQADEANNIN 99
           W     NNIN
Sbjct: 94  WPTSMENNIN 103

[Close]
BLAST of HG10018392 vs. ExPASy Swiss-Prot
Match: B3H6D0 (Heavy metal-associated isoprenylated plant protein 45 OS=Arabidopsis thaliana OX=3702 GN=HIPP45 PE=3 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 8.2e-08
Identity = 28/66 (42.42%), Postives = 45/66 (68.18%), Query Frame = 0 

Query: 24 LMVVELKVFLHCEECIKKILKAIKKIQDIETYNVDIQLNKVTVTGNVTQEEVIKVLQKIR 83
          L +VEL V + C+ C KK+ +AI K+  ++T  +D+   KVTVTG V +EEV+K++++  
Sbjct: 15 LSIVELLVDMDCKGCEKKVRRAISKLDGVDTVEIDVDRQKVTVTGYVDREEVLKMVKRTG 74

Query: 84 KTAIPW 90
          +TA  W
Sbjct: 75 RTAEYW 80

[Close]
BLAST of HG10018392 vs. ExPASy Swiss-Prot
Match: Q58FZ0 (Protein SODIUM POTASSIUM ROOT DEFECTIVE 2 OS=Arabidopsis thaliana OX=3702 GN=NAKR2 PE=2 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 9.1e-07
Identity = 28/74 (37.84%), Postives = 45/74 (60.81%), Query Frame = 0 

Query: 10  LVEKKSIFGPCEHNLMVVELKVFLHCEECIKKILKAIKKIQDIETYNVDIQLNKVTVTGN 69
           L EKK+  G  +    VV LKV LHC  C  K+ K + ++Q + ++N+D    KVTVTG+
Sbjct: 168 LTEKKTTCGDTDQ--QVVVLKVSLHCRGCEGKVRKHLARMQGVTSFNIDFAAKKVTVTGD 227

Query: 70  VTQEEVIKVLQKIR 84
           +T  E++  + K++
Sbjct: 228 ITPLEILDSISKVK 239

[Close]
BLAST of HG10018392 vs. ExPASy Swiss-Prot
Match: F4JZL7 (Heavy metal-associated isoprenylated plant protein 33 OS=Arabidopsis thaliana OX=3702 GN=HIPP33 PE=2 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 1.6e-06
Identity = 29/70 (41.43%), Postives = 43/70 (61.43%), Query Frame = 0 

Query: 29 LKVFLHCEECIKKILKAIKKIQDIETYNVDIQLNKVTVTGNVTQEEVIKVLQKIRKTAIP 88
          LKV +HC+ C +K+ K ++KI+ + T  +D +L KVTV+GNV    +IK L K  K A  
Sbjct: 14 LKVNIHCDGCKQKVKKILQKIEGVFTTKIDAELGKVTVSGNVDPSVLIKKLLKSGKHAEI 73

Query: 89 WQADEANNIN 99
          W A +  + N
Sbjct: 74 WGAPKGGSNN 83

[Close]
BLAST of HG10018392 vs. ExPASy Swiss-Prot
Match: Q9M8K5 (Heavy metal-associated isoprenylated plant protein 32 OS=Arabidopsis thaliana OX=3702 GN=HIPP32 PE=2 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 3.5e-06
Identity = 28/68 (41.18%), Postives = 42/68 (61.76%), Query Frame = 0 

Query: 29 LKVFLHCEECIKKILKAIKKIQDIETYNVDIQLNKVTVTGNVTQEEVIKVLQKIRKTAIP 88
          LKV +HC+ C +K+ K ++KI+ + T  +D +  KVTV+G+V    +IK L K  K A  
Sbjct: 14 LKVNIHCDGCKQKVKKILQKIEGVFTTKIDSEQGKVTVSGSVDPSVLIKKLAKSGKHAEI 73

Query: 89 WQADEANN 97
          W A + NN
Sbjct: 74 WGAPKGNN 81

[Close]
BLAST of HG10018392 vs. ExPASy TrEMBL
Match: A0A0A0K8N1 (HMA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G013360 PE=4 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 2.6e-28
Identity = 67/74 (90.54%), Postives = 70/74 (94.59%), Query Frame = 0 

Query: 26  VVELKVFLHCEECIKKILKAIKKIQDIETYNVDIQLNKVTVTGNVTQEEVIKVLQKIRKT 85
           VVELKVFLHCEECIKKILKAIKKIQDIETYNVD+++NKV VTGNVT EEVIKVLQKIRKT
Sbjct: 4   VVELKVFLHCEECIKKILKAIKKIQDIETYNVDMEMNKVIVTGNVTNEEVIKVLQKIRKT 63

Query: 86  AIPWQADEANNINY 100
           AIPWQ DE NNINY
Sbjct: 64  AIPWQDDELNNINY 77

[Close]
BLAST of HG10018392 vs. ExPASy TrEMBL
Match: A0A5D3C2A2 (Superoxide dismutase 1 copper chaperone OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G001360 PE=4 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 1.8e-26
Identity = 63/74 (85.14%), Postives = 69/74 (93.24%), Query Frame = 0 

Query: 24 LMVVELKVFLHCEECIKKILKAIKKIQDIETYNVDIQLNKVTVTGNVTQEEVIKVLQKIR 83
          + VVELKVFLHC+ECIKKILKAIKKIQDIETYNVD+++NKV VTGNVT EEVIKVLQKIR
Sbjct: 1  MQVVELKVFLHCDECIKKILKAIKKIQDIETYNVDMEMNKVIVTGNVTNEEVIKVLQKIR 60

Query: 84 KTAIPWQADEANNI 98
          KTA+PWQ DE NNI
Sbjct: 61 KTAVPWQDDELNNI 74

[Close]
BLAST of HG10018392 vs. ExPASy TrEMBL
Match: A0A1S3C423 (superoxide dismutase 1 copper chaperone OS=Cucumis melo OX=3656 GN=LOC103496596 PE=4 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 2.4e-26
Identity = 63/72 (87.50%), Postives = 68/72 (94.44%), Query Frame = 0 

Query: 26 VVELKVFLHCEECIKKILKAIKKIQDIETYNVDIQLNKVTVTGNVTQEEVIKVLQKIRKT 85
          VVELKVFLHC+ECIKKILKAIKKIQDIETYNVD+++NKV VTGNVT EEVIKVLQKIRKT
Sbjct: 4  VVELKVFLHCDECIKKILKAIKKIQDIETYNVDMEMNKVIVTGNVTNEEVIKVLQKIRKT 63

Query: 86 AIPWQADEANNI 98
          A+PWQ DE NNI
Sbjct: 64 AVPWQDDELNNI 75

[Close]
BLAST of HG10018392 vs. ExPASy TrEMBL
Match: A0A6J1BV52 (copper transport protein ATX1 OS=Momordica charantia OX=3673 GN=LOC111006024 PE=4 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 2.6e-25
Identity = 64/71 (90.14%), Postives = 65/71 (91.55%), Query Frame = 0 

Query: 26  VVELKVFLHCEECIKKILKAIKKIQDIETYNVDIQLNKVTVTGNVTQEEVIKVLQKIRKT 85
           VVELKV LHCE+CIKKILKAIKKIQDIETYNVD QLNKVTVTGNVT EEVIKVL KI KT
Sbjct: 44  VVELKVGLHCEDCIKKILKAIKKIQDIETYNVDTQLNKVTVTGNVTTEEVIKVLHKISKT 103

Query: 86  AIPWQADEANN 97
           AIPWQADE NN
Sbjct: 104 AIPWQADEVNN 114

[Close]
BLAST of HG10018392 vs. ExPASy TrEMBL
Match: A0A2P2IHW8 (HMA domain-containing protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 3.0e-21
Identity = 58/70 (82.86%), Postives = 62/70 (88.57%), Query Frame = 0 

Query: 26 VVELKVFLHCEECIKKILKAIKKIQDIETYNVDIQLNKVTVTGNVTQEEVIKVLQKIRKT 85
          VVELKV LHCEECIKKILKAIKKIQDIETY+VD QL+KVTVTGNVT EEVI+V+QKI KT
Sbjct: 4  VVELKVGLHCEECIKKILKAIKKIQDIETYDVDTQLSKVTVTGNVTTEEVIRVIQKIGKT 63

Query: 86 AIPWQADEAN 96
          A  W ADE N
Sbjct: 64 ATTWGADEIN 73

[Close]
BLAST of HG10018392 vs. TAIR 10
Match: AT5G05365.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 105.1 bits (261), Expect = 3.2e-23
Identity = 51/67 (76.12%), Postives = 60/67 (89.55%), Query Frame = 0 

Query: 26 VVELKVFLHCEECIKKILKAIKKIQDIETYNVDIQLNKVTVTGNVTQEEVIKVLQKIRKT 85
          VVELKV LHC+ECI+KILKAIKKI+DIE Y+VD QLNKVTVTGNVT+E+VI+VLQK+RK 
Sbjct: 4  VVELKVNLHCDECIRKILKAIKKIEDIEAYDVDTQLNKVTVTGNVTEEQVIRVLQKVRKA 63

Query: 86 AIPWQAD 93
          A+ W  D
Sbjct: 64 AVKWDQD 70

[Close]
BLAST of HG10018392 vs. TAIR 10
Match: AT5G27690.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 59.7 bits (143), Expect = 1.5e-09
Identity = 31/70 (44.29%), Postives = 42/70 (60.00%), Query Frame = 0 

Query: 29  LKVFLHCEECIKKILKAIKKIQDIETYNVDIQLNKVTVTGNVTQEEVIKVLQKIRKTAIP 88
           L+V +HCE C +KI K + KI  + T N+D++  KVTV GNV  E +IK + K  + A  
Sbjct: 34  LRVSIHCEGCKRKIKKILSKIDGVYTTNIDVKQQKVTVIGNVEPEILIKKIMKAGRHAEL 93

Query: 89  WQADEANNIN 99
           W     NNIN
Sbjct: 94  WPTSMENNIN 103

[Close]
BLAST of HG10018392 vs. TAIR 10
Match: AT3G56891.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 57.8 bits (138), Expect = 5.9e-09
Identity = 28/66 (42.42%), Postives = 45/66 (68.18%), Query Frame = 0 

Query: 24 LMVVELKVFLHCEECIKKILKAIKKIQDIETYNVDIQLNKVTVTGNVTQEEVIKVLQKIR 83
          L +VEL V + C+ C KK+ +AI K+  ++T  +D+   KVTVTG V +EEV+K++++  
Sbjct: 15 LSIVELLVDMDCKGCEKKVRRAISKLDGVDTVEIDVDRQKVTVTGYVDREEVLKMVKRTG 74

Query: 84 KTAIPW 90
          +TA  W
Sbjct: 75 RTAEYW 80

[Close]
BLAST of HG10018392 vs. TAIR 10
Match: AT2G37390.1 (Chloroplast-targeted copper chaperone protein )

HSP 1 Score: 54.3 bits (129), Expect = 6.5e-08
Identity = 28/74 (37.84%), Postives = 45/74 (60.81%), Query Frame = 0 

Query: 10  LVEKKSIFGPCEHNLMVVELKVFLHCEECIKKILKAIKKIQDIETYNVDIQLNKVTVTGN 69
           L EKK+  G  +    VV LKV LHC  C  K+ K + ++Q + ++N+D    KVTVTG+
Sbjct: 168 LTEKKTTCGDTDQ--QVVVLKVSLHCRGCEGKVRKHLARMQGVTSFNIDFAAKKVTVTGD 227

Query: 70  VTQEEVIKVLQKIR 84
           +T  E++  + K++
Sbjct: 228 ITPLEILDSISKVK 239

[Close]
BLAST of HG10018392 vs. TAIR 10
Match: AT2G37390.2 (Chloroplast-targeted copper chaperone protein )

HSP 1 Score: 53.5 bits (127), Expect = 1.1e-07
Identity = 28/74 (37.84%), Postives = 45/74 (60.81%), Query Frame = 0 

Query: 10  LVEKKSIFGPCEHNLMVVELKVFLHCEECIKKILKAIKKIQDIETYNVDIQLNKVTVTGN 69
           L EKK+  G  +    VV LKV LHC  C  K+ K + ++Q + ++N+D    KVTVTG+
Sbjct: 168 LTEKKTTCGDTD---QVVVLKVSLHCRGCEGKVRKHLARMQGVTSFNIDFAAKKVTVTGD 227

Query: 70  VTQEEVIKVLQKIR 84
           +T  E++  + K++
Sbjct: 228 ITPLEILDSISKVK 238

The following BLAST results are available for this feature:
BLAST of HG10018392 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004138408.15.3e-2890.54protein SODIUM POTASSIUM ROOT DEFECTIVE 2 [Cucumis sativus][more]
KAE8646572.15.3e-2890.54hypothetical protein Csa_004951, partial [Cucumis sativus][more]
XP_038884077.11.7e-2689.04copper transport protein ATX1 [Benincasa hispida][more]
KAA0052042.13.8e-2685.14superoxide dismutase 1 copper chaperone [Cucumis melo var. makuwa] >TYK04519.1 s... [more]
XP_008456748.14.9e-2687.50PREDICTED: superoxide dismutase 1 copper chaperone [Cucumis melo][more]
BLAST of HG10018392 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q84J882.2e-0844.29Heavy metal-associated isoprenylated plant protein 36 OS=Arabidopsis thaliana OX... [more]
B3H6D08.2e-0842.42Heavy metal-associated isoprenylated plant protein 45 OS=Arabidopsis thaliana OX... [more]
Q58FZ09.1e-0737.84Protein SODIUM POTASSIUM ROOT DEFECTIVE 2 OS=Arabidopsis thaliana OX=3702 GN=NAK... [more]
F4JZL71.6e-0641.43Heavy metal-associated isoprenylated plant protein 33 OS=Arabidopsis thaliana OX... [more]
Q9M8K53.5e-0641.18Heavy metal-associated isoprenylated plant protein 32 OS=Arabidopsis thaliana OX... [more]
BLAST of HG10018392 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K8N12.6e-2890.54HMA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G013360 PE=4 SV... [more]
A0A5D3C2A21.8e-2685.14Superoxide dismutase 1 copper chaperone OS=Cucumis melo var. makuwa OX=1194695 G... [more]
A0A1S3C4232.4e-2687.50superoxide dismutase 1 copper chaperone OS=Cucumis melo OX=3656 GN=LOC103496596 ... [more]
A0A6J1BV522.6e-2590.14copper transport protein ATX1 OS=Momordica charantia OX=3673 GN=LOC111006024 PE=... [more]
A0A2P2IHW83.0e-2182.86HMA domain-containing protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1[more]
BLAST of HG10018392 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G05365.13.2e-2376.12Heavy metal transport/detoxification superfamily protein [more]
AT5G27690.11.5e-0944.29Heavy metal transport/detoxification superfamily protein [more]
AT3G56891.15.9e-0942.42Heavy metal transport/detoxification superfamily protein [more]
AT2G37390.16.5e-0837.84Chloroplast-targeted copper chaperone protein [more]
AT2G37390.21.1e-0737.84Chloroplast-targeted copper chaperone protein [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006121Heavy metal-associated domain, HMAPFAMPF00403HMAcoord: 30..85
e-value: 1.7E-12
score: 47.5
IPR006121Heavy metal-associated domain, HMAPROSITEPS50846HMA_2coord: 33..88
score: 9.149146
NoneNo IPR availableGENE3D3.30.70.100coord: 23..87
e-value: 5.7E-15
score: 57.3
NoneNo IPR availablePANTHERPTHR22814COPPER TRANSPORT PROTEIN ATOX1-RELATEDcoord: 25..95
NoneNo IPR availablePANTHERPTHR22814:SF304HEAVY METAL TRANSPORT/DETOXIFICATION SUPERFAMILY PROTEINcoord: 25..95
IPR036163Heavy metal-associated domain superfamilySUPERFAMILY55008HMA, heavy metal-associated domaincoord: 21..93

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10018392.1HG10018392.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0046872 metal ion binding