HG10018378 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10018378
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionTPRXL protein
LocationChr04: 3605730 .. 3606443 (+)
RNA-Seq ExpressionHG10018378
SyntenyHG10018378
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAAACTACTCCAAACTATGACCAAATTTCTCAAAAATCTTTCCAAACTACCAAACATGAAGATAGATTCTTCACTAGAGCTCTATCTAAAGAGGCTAATTCCTCCATCAACTCCTCTTTTCGAGTCTATTACGGCGGTGCTACCGGTGCGATTCCGTTCCGATGGGAGTCTCGACCCGGAACTCCAAAGCATACTTTTTCAGAAACTTCAATCCCTCCTCTTACTCCTCCTCCTTCTTACTATTCCTCTTCACATTCTACTTCAAAGGCTTCTTCCAAAGCAACCCTTTTGAGCTCGATTTTTCCTCGGTTCACGCCGAGGAAATCTCGAACAACTTCCCCATCTTTTTCTTCCTTCTCTGGCTCCTCCTCCTCGTCATCTTCCTTAGCATCCTGGTCATCCTCTCGCTCATCGTCCTCCTCGTCTCCCTCAGCTTTCGTTAGACCTAAATTCTTCAAACGTCGTCGTCGCTTCTCGGATTCTCCAAGCTTACCGTTCGAGTATAGCTTCGACGACAACGACGGGGACGAGGTGGGGGTTGGGAGTCGTCCCAATTCTCCTACATCAACTTTGTGCTTTGGTGGTTCTACTTCAAGTAGAGCTTCATTGTTTGGTGGTTGTTATCAGTTAGTGAGTGTGAAGAATGCTTTGTTGTCCATTGTTGGCCATGGATCTGCAACCAGAGGTACTCTTAATTATTTAGTTGTGTGA

mRNA sequence

ATGCAAACTACTCCAAACTATGACCAAATTTCTCAAAAATCTTTCCAAACTACCAAACATGAAGATAGATTCTTCACTAGAGCTCTATCTAAAGAGGCTAATTCCTCCATCAACTCCTCTTTTCGAGTCTATTACGGCGGTGCTACCGGTGCGATTCCGTTCCGATGGGAGTCTCGACCCGGAACTCCAAAGCATACTTTTTCAGAAACTTCAATCCCTCCTCTTACTCCTCCTCCTTCTTACTATTCCTCTTCACATTCTACTTCAAAGGCTTCTTCCAAAGCAACCCTTTTGAGCTCGATTTTTCCTCGGTTCACGCCGAGGAAATCTCGAACAACTTCCCCATCTTTTTCTTCCTTCTCTGGCTCCTCCTCCTCGTCATCTTCCTTAGCATCCTGGTCATCCTCTCGCTCATCGTCCTCCTCGTCTCCCTCAGCTTTCGTTAGACCTAAATTCTTCAAACGTCGTCGTCGCTTCTCGGATTCTCCAAGCTTACCGTTCGAGTATAGCTTCGACGACAACGACGGGGACGAGGTGGGGGTTGGGAGTCGTCCCAATTCTCCTACATCAACTTTGTGCTTTGGTGGTTCTACTTCAAGTAGAGCTTCATTGTTTGGTGGTTGTTATCAGTTAGTGAGTGTGAAGAATGCTTTGTTGTCCATTGTTGGCCATGGATCTGCAACCAGAGGTACTCTTAATTATTTAGTTGTGTGA

Coding sequence (CDS)

ATGCAAACTACTCCAAACTATGACCAAATTTCTCAAAAATCTTTCCAAACTACCAAACATGAAGATAGATTCTTCACTAGAGCTCTATCTAAAGAGGCTAATTCCTCCATCAACTCCTCTTTTCGAGTCTATTACGGCGGTGCTACCGGTGCGATTCCGTTCCGATGGGAGTCTCGACCCGGAACTCCAAAGCATACTTTTTCAGAAACTTCAATCCCTCCTCTTACTCCTCCTCCTTCTTACTATTCCTCTTCACATTCTACTTCAAAGGCTTCTTCCAAAGCAACCCTTTTGAGCTCGATTTTTCCTCGGTTCACGCCGAGGAAATCTCGAACAACTTCCCCATCTTTTTCTTCCTTCTCTGGCTCCTCCTCCTCGTCATCTTCCTTAGCATCCTGGTCATCCTCTCGCTCATCGTCCTCCTCGTCTCCCTCAGCTTTCGTTAGACCTAAATTCTTCAAACGTCGTCGTCGCTTCTCGGATTCTCCAAGCTTACCGTTCGAGTATAGCTTCGACGACAACGACGGGGACGAGGTGGGGGTTGGGAGTCGTCCCAATTCTCCTACATCAACTTTGTGCTTTGGTGGTTCTACTTCAAGTAGAGCTTCATTGTTTGGTGGTTGTTATCAGTTAGTGAGTGTGAAGAATGCTTTGTTGTCCATTGTTGGCCATGGATCTGCAACCAGAGGTACTCTTAATTATTTAGTTGTGTGA

Protein sequence

MQTTPNYDQISQKSFQTTKHEDRFFTRALSKEANSSINSSFRVYYGGATGAIPFRWESRPGTPKHTFSETSIPPLTPPPSYYSSSHSTSKASSKATLLSSIFPRFTPRKSRTTSPSFSSFSGSSSSSSSLASWSSSRSSSSSSPSAFVRPKFFKRRRRFSDSPSLPFEYSFDDNDGDEVGVGSRPNSPTSTLCFGGSTSSRASLFGGCYQLVSVKNALLSIVGHGSATRGTLNYLVV
Homology
BLAST of HG10018378 vs. NCBI nr
Match: XP_011656432.1 (putative protein TPRXL [Cucumis sativus])

HSP 1 Score: 373.2 bits (957), Expect = 1.6e-99
Identity = 205/230 (89.13%), Postives = 212/230 (92.17%), Query Frame = 0

Query: 4   TPNYDQISQKSFQTTKHEDRFFTRALSKEANSSINSSFRVYYGGATGAIPFRWESRPGTP 63
           T +YDQISQKSF  TKHED+FFTRALSKE NS+ NSSFRVYYGGATGAIPFRWESRPGTP
Sbjct: 3   TQSYDQISQKSFPITKHEDKFFTRALSKELNSTTNSSFRVYYGGATGAIPFRWESRPGTP 62

Query: 64  KHTFSETSIPPLTPPPSYYSSSHSTSKASSKATLLSSIFPRFTPRKSRTTSPSFSSFSGS 123
           KHTFS+TSIPPLTPPPSY+SSSHSTSKASSK TLLSSIFPR TPRKSR TSPSFSS SGS
Sbjct: 63  KHTFSDTSIPPLTPPPSYFSSSHSTSKASSKPTLLSSIFPRLTPRKSR-TSPSFSSSSGS 122

Query: 124 SSSSSSLASWSSSRSSSSSSPSAFVRPKFFKRRRRFSDSPSLPFEYSFDDNDGDEVGVGS 183
           SSSSSSLASWSSS SSSSSSPS FVRPKFFKRRRRFSD PSLPFEYSFDD DGDEV  GS
Sbjct: 123 SSSSSSLASWSSSFSSSSSSPSPFVRPKFFKRRRRFSDIPSLPFEYSFDDKDGDEVVAGS 182

Query: 184 RPNSPTSTLCFGGSTSSRASLFGGCYQLVSVKNALLSIVGHGSATRGTLN 234
            PNSPTS LCFGG +SSRASLFGGCYQLVSVKNALLSIVGHGSA+RGTLN
Sbjct: 183 APNSPTSILCFGGGSSSRASLFGGCYQLVSVKNALLSIVGHGSASRGTLN 231

BLAST of HG10018378 vs. NCBI nr
Match: XP_038885974.1 (putative protein TPRXL [Benincasa hispida])

HSP 1 Score: 370.2 bits (949), Expect = 1.4e-98
Identity = 206/230 (89.57%), Postives = 214/230 (93.04%), Query Frame = 0

Query: 4   TPNYDQISQKSFQTTKHEDRFFTRALSKEANSSINSSFRVYYGGATGAIPFRWESRPGTP 63
           T NYDQISQKSFQ+TKHEDRFF RALSK+ NS+ NSSFRVYYGGATGAIPFRWESRPGTP
Sbjct: 3   TQNYDQISQKSFQSTKHEDRFFNRALSKDLNSTTNSSFRVYYGGATGAIPFRWESRPGTP 62

Query: 64  KHTFSETSIPPLTPPPSYYSSSHSTSKASSKATLLSSIFPRFTPRKSRTTSPSFSSFSGS 123
           KH FS+TSIPPLTPPPSYYSSSHSTSKASSK TLLSSIFPR TPRKSRT+S SFSS SGS
Sbjct: 63  KHPFSDTSIPPLTPPPSYYSSSHSTSKASSKPTLLSSIFPRLTPRKSRTSS-SFSSSSGS 122

Query: 124 SSSSSSLASWSSSRSSSSSSPSAFVRPKFFKRRRRFSDSPSLPFEYSFDDNDGDEVGVGS 183
           SSSSSS ASWSSSRSSSSSSPSAFVRPKFFKRRRRFS+S SLPFEYSFDDND DEV  GS
Sbjct: 123 SSSSSS-ASWSSSRSSSSSSPSAFVRPKFFKRRRRFSESSSLPFEYSFDDNDRDEVVTGS 182

Query: 184 RPNSPTSTLCFGGSTSSRASLFGGCYQLVSVKNALLSIVGHGSATRGTLN 234
            PNSPTSTLCFGG +SSRASLFGGCYQLVSVKNALLSIVGHGSA+RGTLN
Sbjct: 183 TPNSPTSTLCFGGCSSSRASLFGGCYQLVSVKNALLSIVGHGSASRGTLN 230

BLAST of HG10018378 vs. NCBI nr
Match: KAE8646577.1 (hypothetical protein Csa_005771 [Cucumis sativus])

HSP 1 Score: 367.5 bits (942), Expect = 8.9e-98
Identity = 202/227 (88.99%), Postives = 209/227 (92.07%), Query Frame = 0

Query: 4   TPNYDQISQKSFQTTKHEDRFFTRALSKEANSSINSSFRVYYGGATGAIPFRWESRPGTP 63
           T +YDQISQKSF  TKHED+FFTRALSKE NS+ NSSFRVYYGGATGAIPFRWESRPGTP
Sbjct: 3   TQSYDQISQKSFPITKHEDKFFTRALSKELNSTTNSSFRVYYGGATGAIPFRWESRPGTP 62

Query: 64  KHTFSETSIPPLTPPPSYYSSSHSTSKASSKATLLSSIFPRFTPRKSRTTSPSFSSFSGS 123
           KHTFS+TSIPPLTPPPSY+SSSHSTSKASSK TLLSSIFPR TPRKSR TSPSFSS SGS
Sbjct: 63  KHTFSDTSIPPLTPPPSYFSSSHSTSKASSKPTLLSSIFPRLTPRKSR-TSPSFSSSSGS 122

Query: 124 SSSSSSLASWSSSRSSSSSSPSAFVRPKFFKRRRRFSDSPSLPFEYSFDDNDGDEVGVGS 183
           SSSSSSLASWSSS SSSSSSPS FVRPKFFKRRRRFSD PSLPFEYSFDD DGDEV  GS
Sbjct: 123 SSSSSSLASWSSSFSSSSSSPSPFVRPKFFKRRRRFSDIPSLPFEYSFDDKDGDEVVAGS 182

Query: 184 RPNSPTSTLCFGGSTSSRASLFGGCYQLVSVKNALLSIVGHGSATRG 231
            PNSPTS LCFGG +SSRASLFGGCYQLVSVKNALLSIVGHGSA+RG
Sbjct: 183 APNSPTSILCFGGGSSSRASLFGGCYQLVSVKNALLSIVGHGSASRG 228

BLAST of HG10018378 vs. NCBI nr
Match: XP_016901982.1 (PREDICTED: putative uncharacterized protein DDB_G0277255 [Cucumis melo] >KAA0052017.1 putative serine-rich protein [Cucumis melo var. makuwa])

HSP 1 Score: 364.4 bits (934), Expect = 7.5e-97
Identity = 204/231 (88.31%), Postives = 209/231 (90.48%), Query Frame = 0

Query: 4   TPNYDQISQKSFQTTKHEDRFFTRALSKEANSSINSSFRVYYGGATGAIPFRWESRPGTP 63
           T NYDQISQKS Q TKHEDRFFTRALSKE NS+ NSSFRVYYGGATGAIPFRWESRPGTP
Sbjct: 3   TQNYDQISQKSSQITKHEDRFFTRALSKELNSTTNSSFRVYYGGATGAIPFRWESRPGTP 62

Query: 64  KHTFSETSIPPLTPPPSYYSSSHSTSKASSKATLLSSIFPRFTPRKSRTTSPSFSSFSGS 123
           KHTFS+TSIPPLTPPPSY+SSSHSTSKASSK TLLSSIFPR TPRKSR T PSFSS SGS
Sbjct: 63  KHTFSDTSIPPLTPPPSYFSSSHSTSKASSKPTLLSSIFPRLTPRKSR-TFPSFSSSSGS 122

Query: 124 SSSSSSLASWSSSRSSSSSSPSAFVRPKFFKRRRRFSDSPSLPFEYSFDDNDGDEVGVGS 183
           SSSSSSLASWSSS SSSSSSPS FVRPKFFKRRR FSD PSLPFEYSFDD DGDEV  GS
Sbjct: 123 SSSSSSLASWSSSFSSSSSSPSPFVRPKFFKRRRHFSDIPSLPFEYSFDDKDGDEVVAGS 182

Query: 184 -RPNSPTSTLCFGGSTSSRASLFGGCYQLVSVKNALLSIVGHGSATRGTLN 234
             PNSPTS LCFGG +SSRASLFGGCYQLVSVK ALLSIVGHGSA+RGTLN
Sbjct: 183 TAPNSPTSILCFGGGSSSRASLFGGCYQLVSVKKALLSIVGHGSASRGTLN 232

BLAST of HG10018378 vs. NCBI nr
Match: XP_022134140.1 (putative protein TPRXL [Momordica charantia])

HSP 1 Score: 292.7 bits (748), Expect = 2.8e-75
Identity = 172/231 (74.46%), Postives = 187/231 (80.95%), Query Frame = 0

Query: 6   NYDQISQKSFQTTKHEDRFFTR---ALSKEANSSINSSFRVYYGGATGAIPFRWESRPGT 65
           NYDQISQK  Q     DRFFTR    LSKEANS+ NSSFRVYYGGA+GAIPFRWESRPGT
Sbjct: 5   NYDQISQKPLQIKHQNDRFFTRPAPVLSKEANSAANSSFRVYYGGASGAIPFRWESRPGT 64

Query: 66  PKHTFSETSIPPLTPPPSYYSSSHSTSKASSKATLLSSIFPRFTPRKSRTTSPSFSSFSG 125
           PKH++SETSIPPLTPPPSYY+SSHS SKASSK TLLSSIFPR  PR+SR +  SFS    
Sbjct: 65  PKHSYSETSIPPLTPPPSYYTSSHSNSKASSKPTLLSSIFPRLAPRRSRNSPSSFS---- 124

Query: 126 SSSSSSSLASWSSSRSSSSSSPSAFVRPKFFKRRRRFSDSPSLPFEYSFDDNDGDEVGVG 185
           S+S SSS +SWSSSRSSSSSSP    +  FFKRRR  SD+PSLPFEYSFDD DGDE G  
Sbjct: 125 SASLSSSFSSWSSSRSSSSSSP----KLNFFKRRRSISDTPSLPFEYSFDDGDGDEPG-- 184

Query: 186 SRPNSPTSTLCFGGSTSSRASLFGGCYQLVSVKNALLSIVGHGSATRGTLN 234
              NSPTSTLCFGG++SSRAS F GCYQLVSVKNA LS+VGHGSA RGT+N
Sbjct: 185 -SSNSPTSTLCFGGASSSRAS-FRGCYQLVSVKNAFLSMVGHGSAGRGTVN 223

BLAST of HG10018378 vs. ExPASy TrEMBL
Match: A0A0A0K7T8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014460 PE=4 SV=1)

HSP 1 Score: 373.2 bits (957), Expect = 7.8e-100
Identity = 205/230 (89.13%), Postives = 212/230 (92.17%), Query Frame = 0

Query: 4   TPNYDQISQKSFQTTKHEDRFFTRALSKEANSSINSSFRVYYGGATGAIPFRWESRPGTP 63
           T +YDQISQKSF  TKHED+FFTRALSKE NS+ NSSFRVYYGGATGAIPFRWESRPGTP
Sbjct: 3   TQSYDQISQKSFPITKHEDKFFTRALSKELNSTTNSSFRVYYGGATGAIPFRWESRPGTP 62

Query: 64  KHTFSETSIPPLTPPPSYYSSSHSTSKASSKATLLSSIFPRFTPRKSRTTSPSFSSFSGS 123
           KHTFS+TSIPPLTPPPSY+SSSHSTSKASSK TLLSSIFPR TPRKSR TSPSFSS SGS
Sbjct: 63  KHTFSDTSIPPLTPPPSYFSSSHSTSKASSKPTLLSSIFPRLTPRKSR-TSPSFSSSSGS 122

Query: 124 SSSSSSLASWSSSRSSSSSSPSAFVRPKFFKRRRRFSDSPSLPFEYSFDDNDGDEVGVGS 183
           SSSSSSLASWSSS SSSSSSPS FVRPKFFKRRRRFSD PSLPFEYSFDD DGDEV  GS
Sbjct: 123 SSSSSSLASWSSSFSSSSSSPSPFVRPKFFKRRRRFSDIPSLPFEYSFDDKDGDEVVAGS 182

Query: 184 RPNSPTSTLCFGGSTSSRASLFGGCYQLVSVKNALLSIVGHGSATRGTLN 234
            PNSPTS LCFGG +SSRASLFGGCYQLVSVKNALLSIVGHGSA+RGTLN
Sbjct: 183 APNSPTSILCFGGGSSSRASLFGGCYQLVSVKNALLSIVGHGSASRGTLN 231

BLAST of HG10018378 vs. ExPASy TrEMBL
Match: A0A5A7UC51 (Putative serine-rich protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold60G005080 PE=4 SV=1)

HSP 1 Score: 364.4 bits (934), Expect = 3.6e-97
Identity = 204/231 (88.31%), Postives = 209/231 (90.48%), Query Frame = 0

Query: 4   TPNYDQISQKSFQTTKHEDRFFTRALSKEANSSINSSFRVYYGGATGAIPFRWESRPGTP 63
           T NYDQISQKS Q TKHEDRFFTRALSKE NS+ NSSFRVYYGGATGAIPFRWESRPGTP
Sbjct: 3   TQNYDQISQKSSQITKHEDRFFTRALSKELNSTTNSSFRVYYGGATGAIPFRWESRPGTP 62

Query: 64  KHTFSETSIPPLTPPPSYYSSSHSTSKASSKATLLSSIFPRFTPRKSRTTSPSFSSFSGS 123
           KHTFS+TSIPPLTPPPSY+SSSHSTSKASSK TLLSSIFPR TPRKSR T PSFSS SGS
Sbjct: 63  KHTFSDTSIPPLTPPPSYFSSSHSTSKASSKPTLLSSIFPRLTPRKSR-TFPSFSSSSGS 122

Query: 124 SSSSSSLASWSSSRSSSSSSPSAFVRPKFFKRRRRFSDSPSLPFEYSFDDNDGDEVGVGS 183
           SSSSSSLASWSSS SSSSSSPS FVRPKFFKRRR FSD PSLPFEYSFDD DGDEV  GS
Sbjct: 123 SSSSSSLASWSSSFSSSSSSPSPFVRPKFFKRRRHFSDIPSLPFEYSFDDKDGDEVVAGS 182

Query: 184 -RPNSPTSTLCFGGSTSSRASLFGGCYQLVSVKNALLSIVGHGSATRGTLN 234
             PNSPTS LCFGG +SSRASLFGGCYQLVSVK ALLSIVGHGSA+RGTLN
Sbjct: 183 TAPNSPTSILCFGGGSSSRASLFGGCYQLVSVKKALLSIVGHGSASRGTLN 232

BLAST of HG10018378 vs. ExPASy TrEMBL
Match: A0A1S4E178 (Uncharacterized protein OS=Cucumis melo OX=3656 GN=LOC103496610 PE=4 SV=1)

HSP 1 Score: 364.4 bits (934), Expect = 3.6e-97
Identity = 204/231 (88.31%), Postives = 209/231 (90.48%), Query Frame = 0

Query: 4   TPNYDQISQKSFQTTKHEDRFFTRALSKEANSSINSSFRVYYGGATGAIPFRWESRPGTP 63
           T NYDQISQKS Q TKHEDRFFTRALSKE NS+ NSSFRVYYGGATGAIPFRWESRPGTP
Sbjct: 3   TQNYDQISQKSSQITKHEDRFFTRALSKELNSTTNSSFRVYYGGATGAIPFRWESRPGTP 62

Query: 64  KHTFSETSIPPLTPPPSYYSSSHSTSKASSKATLLSSIFPRFTPRKSRTTSPSFSSFSGS 123
           KHTFS+TSIPPLTPPPSY+SSSHSTSKASSK TLLSSIFPR TPRKSR T PSFSS SGS
Sbjct: 63  KHTFSDTSIPPLTPPPSYFSSSHSTSKASSKPTLLSSIFPRLTPRKSR-TFPSFSSSSGS 122

Query: 124 SSSSSSLASWSSSRSSSSSSPSAFVRPKFFKRRRRFSDSPSLPFEYSFDDNDGDEVGVGS 183
           SSSSSSLASWSSS SSSSSSPS FVRPKFFKRRR FSD PSLPFEYSFDD DGDEV  GS
Sbjct: 123 SSSSSSLASWSSSFSSSSSSPSPFVRPKFFKRRRHFSDIPSLPFEYSFDDKDGDEVVAGS 182

Query: 184 -RPNSPTSTLCFGGSTSSRASLFGGCYQLVSVKNALLSIVGHGSATRGTLN 234
             PNSPTS LCFGG +SSRASLFGGCYQLVSVK ALLSIVGHGSA+RGTLN
Sbjct: 183 TAPNSPTSILCFGGGSSSRASLFGGCYQLVSVKKALLSIVGHGSASRGTLN 232

BLAST of HG10018378 vs. ExPASy TrEMBL
Match: A0A6J1BX95 (Uncharacterized protein OS=Momordica charantia OX=3673 GN=LOC111006479 PE=4 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 1.3e-75
Identity = 172/231 (74.46%), Postives = 187/231 (80.95%), Query Frame = 0

Query: 6   NYDQISQKSFQTTKHEDRFFTR---ALSKEANSSINSSFRVYYGGATGAIPFRWESRPGT 65
           NYDQISQK  Q     DRFFTR    LSKEANS+ NSSFRVYYGGA+GAIPFRWESRPGT
Sbjct: 5   NYDQISQKPLQIKHQNDRFFTRPAPVLSKEANSAANSSFRVYYGGASGAIPFRWESRPGT 64

Query: 66  PKHTFSETSIPPLTPPPSYYSSSHSTSKASSKATLLSSIFPRFTPRKSRTTSPSFSSFSG 125
           PKH++SETSIPPLTPPPSYY+SSHS SKASSK TLLSSIFPR  PR+SR +  SFS    
Sbjct: 65  PKHSYSETSIPPLTPPPSYYTSSHSNSKASSKPTLLSSIFPRLAPRRSRNSPSSFS---- 124

Query: 126 SSSSSSSLASWSSSRSSSSSSPSAFVRPKFFKRRRRFSDSPSLPFEYSFDDNDGDEVGVG 185
           S+S SSS +SWSSSRSSSSSSP    +  FFKRRR  SD+PSLPFEYSFDD DGDE G  
Sbjct: 125 SASLSSSFSSWSSSRSSSSSSP----KLNFFKRRRSISDTPSLPFEYSFDDGDGDEPG-- 184

Query: 186 SRPNSPTSTLCFGGSTSSRASLFGGCYQLVSVKNALLSIVGHGSATRGTLN 234
              NSPTSTLCFGG++SSRAS F GCYQLVSVKNA LS+VGHGSA RGT+N
Sbjct: 185 -SSNSPTSTLCFGGASSSRAS-FRGCYQLVSVKNAFLSMVGHGSAGRGTVN 223

BLAST of HG10018378 vs. ExPASy TrEMBL
Match: A0A6J1K022 (uncharacterized serine-rich protein C215.13-like OS=Cucurbita maxima OX=3661 GN=LOC111489820 PE=4 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 2.7e-68
Identity = 162/202 (80.20%), Postives = 171/202 (84.65%), Query Frame = 0

Query: 31  KEANSSINSSFRVYYGGATGAIPFRWESRPGTPKHTFSETSIPPLTPPPSYYSSSHSTSK 90
           KEANS+ NSSFRVYYGGATGAIPFRWESRPGTPKHT+S+TSIPPLTPPPSYYSSSHSTSK
Sbjct: 12  KEANSAANSSFRVYYGGATGAIPFRWESRPGTPKHTYSDTSIPPLTPPPSYYSSSHSTSK 71

Query: 91  ASSKATLLSSIFPRFTPRKSRTTSPSFSSFSGSSSSSSSLASWSSSRSSSSSSPSAFVRP 150
            S K T  +SIF     RKSRT S SFS  S SSSSSSS  SWSSSR    SSPSAFVRP
Sbjct: 72  PSPKPTRFTSIF-----RKSRTAS-SFSFSSSSSSSSSSFTSWSSSR----SSPSAFVRP 131

Query: 151 KFFKRRRRFSDSPSLPFEYSFDDNDGDEVGVGSRPNSPTSTLCFGGSTSS-RASLFGGCY 210
           KFFK RR FS+SPSLPFE SFDDN+GDE  VGS P+SPTSTLCFGG +SS RASLF GCY
Sbjct: 132 KFFKHRRCFSNSPSLPFECSFDDNEGDE-AVGS-PDSPTSTLCFGGGSSSRRASLFRGCY 191

Query: 211 QLVSVKNALLSIVGHGSATRGT 232
           QLVSVKNALLSIVGHGSA+RGT
Sbjct: 192 QLVSVKNALLSIVGHGSASRGT 201

BLAST of HG10018378 vs. TAIR 10
Match: AT2G40475.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G56260.2); Has 477 Blast hits to 219 proteins in 41 species: Archae - 0; Bacteria - 4; Metazoa - 91; Fungi - 61; Plants - 144; Viruses - 0; Other Eukaryotes - 177 (source: NCBI BLink). )

HSP 1 Score: 86.3 bits (212), Expect = 3.7e-17
Identity = 82/198 (41.41%), Postives = 109/198 (55.05%), Query Frame = 0

Query: 34  NSSINSSFRVYYGGATGAIPFRWESRPGTPKHT-FSET-SIPPLTPPPSYYSSSHSTSKA 93
           +S +NSS R+YY G   ++PF WE+RPGTPKH  FSE+  +PPLTPPPSYYSSS S+   
Sbjct: 22  SSQVNSSSRIYYYGG-ASVPFLWETRPGTPKHALFSESLRLPPLTPPPSYYSSSSSSGNK 81

Query: 94  SSKATLLSSIFPRFTPRKSRTTSPSFSSFSGSSSSSSSLASWSSSRSSSSSSPSAFVRPK 153
            SKA  +       T      + PSFS  S SSSSSSS          SSSSP + V   
Sbjct: 82  LSKARTIKQTRFVKTLLSRHVSRPSFSWSSASSSSSSSY---------SSSSPPSKVE-- 141

Query: 154 FFKRRRRFSDSPSLPFEYSFDDNDGDEVGVGSRPNSPTSTLCFGGSTSSRASLFGGCYQL 213
             + R+ +S S S    Y  +D++ + V      +SPTSTLC+    SS          +
Sbjct: 142 -HRPRKCYSCSRS----YVKEDDEEEIVS-----SSPTSTLCYKRGFSS---------SM 188

Query: 214 VSVKNALLSIVGHGSATR 230
            S+K AL S++ HGS+ +
Sbjct: 202 GSMKRALCSVLSHGSSRK 188

BLAST of HG10018378 vs. TAIR 10
Match: AT5G01790.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; Has 121 Blast hits to 121 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 121; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 65.9 bits (159), Expect = 5.1e-11
Identity = 43/97 (44.33%), Postives = 57/97 (58.76%), Query Frame = 0

Query: 5   PNYDQISQKSFQTTKHEDRFFTRAL--SKEANSSINS---SFRV-YYGGATGAIPFRWES 64
           PN       S    K +   F+  L  +K+  SS+++   SFR+ YY GA GA+PF WES
Sbjct: 22  PNAGSERAASLSLKKQDTATFSGKLPSTKQRFSSVSAACPSFRIYYYDGAAGAVPFEWES 81

Query: 65  RPGTPKHTFSE-TSIPPLTPPPSYYSSSHSTSKASSK 95
            PGTPKH  SE  ++PPLTPPPS++S S    +  SK
Sbjct: 82  HPGTPKHPSSELPTLPPLTPPPSHFSFSGDQIRRRSK 118

BLAST of HG10018378 vs. TAIR 10
Match: AT3G56260.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G40475.1). )

HSP 1 Score: 62.0 bits (149), Expect = 7.4e-10
Identity = 78/192 (40.62%), Postives = 95/192 (49.48%), Query Frame = 0

Query: 32  EANSSINSSFRVYYGGATGAIPFRWESRPGTPK-HTFSETSIP-PLTPPPSYYSSS-HST 91
           E + +I+     YYGGA  +IPF WESRPGTPK H  S++S+P PLTPPPSYYSS   ST
Sbjct: 6   EDDFAIDEERSSYYGGA--SIPFIWESRPGTPKNHLCSDSSLPLPLTPPPSYYSSGILST 65

Query: 92  SKASSKATLLSSIFPRFTPRKSRTTSPSFSSFSGSSSSSSSLASWSSSRSSSSSSPSAFV 151
            +  SK     S F  F+       S    S  GS  ++SS  SWSS+ SSSS S S   
Sbjct: 66  PRTQSKVRSKLSKFLSFS-----MFSDLRRSNHGSKKTASSSFSWSSTSSSSSFSSSP-- 125

Query: 152 RPKFFKRRRRFSDSPSLPFEYSFDDNDGDEVGVGSRPNSPTSTLCFGGSTSSRASLFGGC 211
            P   K  +R S     P  Y+  + D          +SPTSTLC      S     G  
Sbjct: 126 -PHSLK--KRMSHDKKSPLLYANYEED-------ELRSSPTSTLC-----CSNGGRLGCS 173

Query: 212 YQLVSVKNALLS 221
             + SV  AL S
Sbjct: 186 SSMGSVTRALFS 173

BLAST of HG10018378 vs. TAIR 10
Match: AT1G06930.1 (unknown protein; Has 4478 Blast hits to 355 proteins in 82 species: Archae - 0; Bacteria - 29; Metazoa - 379; Fungi - 125; Plants - 120; Viruses - 25; Other Eukaryotes - 3800 (source: NCBI BLink). )

HSP 1 Score: 50.1 bits (118), Expect = 2.9e-06
Identity = 59/165 (35.76%), Postives = 84/165 (50.91%), Query Frame = 0

Query: 44  YYGGATGAIPFRWESRPGTPK-----------HTFSETSIP---PLTPPPSYYSSSHSTS 103
           YYGG++ A+PF+WES+PGTP+           ++ S+ + P   PLTPPPSY+ +S S++
Sbjct: 24  YYGGSSAAVPFKWESQPGTPRRLSKRSSSSGFNSDSDFNFPVSAPLTPPPSYFYASPSST 83

Query: 104 KASSKATLLSSIFPRFTPRKSRTTSPSFSSFSGSSSSSSSLASWSSSRSSSSSSPSAFVR 163
           K               +P+K+ T   S  S + S  SS +    SSS SSSSS PS+ +R
Sbjct: 84  K-------------HVSPKKTNTLFSSLLSKNRSVPSSPA----SSSSSSSSSVPSSPLR 143

Query: 164 PKFFKRRRRFSDSPSLPFEYSFDDNDGDEVGVGSRPNSPTSTLCF 195
                 RRR     S+ FE       G  +  GS  NS  S+ C+
Sbjct: 144 TSDLSNRRR-----SMWFE------SGSSLDYGS--NSAKSSGCY 158

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_011656432.11.6e-9989.13putative protein TPRXL [Cucumis sativus][more]
XP_038885974.11.4e-9889.57putative protein TPRXL [Benincasa hispida][more]
KAE8646577.18.9e-9888.99hypothetical protein Csa_005771 [Cucumis sativus][more]
XP_016901982.17.5e-9788.31PREDICTED: putative uncharacterized protein DDB_G0277255 [Cucumis melo] >KAA0052... [more]
XP_022134140.12.8e-7574.46putative protein TPRXL [Momordica charantia][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0K7T87.8e-10089.13Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014460 PE=4 SV=1[more]
A0A5A7UC513.6e-9788.31Putative serine-rich protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca... [more]
A0A1S4E1783.6e-9788.31Uncharacterized protein OS=Cucumis melo OX=3656 GN=LOC103496610 PE=4 SV=1[more]
A0A6J1BX951.3e-7574.46Uncharacterized protein OS=Momordica charantia OX=3673 GN=LOC111006479 PE=4 SV=1[more]
A0A6J1K0222.7e-6880.20uncharacterized serine-rich protein C215.13-like OS=Cucurbita maxima OX=3661 GN=... [more]
Match NameE-valueIdentityDescription
AT2G40475.13.7e-1741.41unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT5G01790.15.1e-1144.33unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT3G56260.27.4e-1040.63unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT1G06930.12.9e-0635.76unknown protein; Has 4478 Blast hits to 355 proteins in 82 species: Archae - 0; ... [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 55..88
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 107..128
NoneNo IPR availablePANTHERPTHR33257OS05G0165500 PROTEINcoord: 7..210
NoneNo IPR availablePANTHERPTHR33257:SF24EXPRESSED PROTEINcoord: 7..210

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10018378.1HG10018378.1mRNA