HG10018372 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10018372
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	zf-RVT domain-containing protein
Location	Chr04: 3561448 .. 3562017 (-)
RNA-Seq Expression	HG10018372
Synteny	HG10018372

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGGCGAAATATCTTGTGGGGTTGTGAGTTATTTGTTAGGGGGTATTGTTGGCAGGTCGGGAATGGCTTGTCCATTAGAATTGAGGAGAATCCTTGGCTCCCTAGGCCTGGGAGTGGTTTGGTGAACCTGAGTGACAGTTGTAGGGGTGAGTTGGTTGCTTCTCTATTGATTAATAGTGGGGAGTGGGACGTTGGTAACGTTGGTGATGATTTTGTTGAGGAGGGGGCTACACTGATACTTTCTATCTGGGTGAATGGACTTCGGAGAGATGACGAGATCTATTGGGTGTTGGATAAAAAGGGGGCTTTCTCCGTGAAAAGTGCATATAAGCTCGGTTTATATCTTGCCTCTCTCGGGGAGGGTTCATCATCCTCATCAGAGGCGACTGTGGTGGTATGGAATTGTCTTTGGAATAGTTCCTTACCAATGAAGGTTAAGCTTTGTTGTTGGCGAGTGTTCTTAGGTATTCTTCCTTCTCGGGAAAATCTTGTGGGCAAGGGATTGGACCTTGACTCGCGGTGCCCTTTGTGTGAAGGAAAGCCTGAGACATCGGTACATCTTTTATAG

mRNA sequence

ATGTGGCGAAATATCTTGTGGGGTTGTGAGTTATTTGTTAGGGGGTATTGTTGGCAGGTCGGGAATGGCTTGTCCATTAGAATTGAGGAGAATCCTTGGCTCCCTAGGCCTGGGAGTGGTTTGGTGAACCTGAGTGACAGTTGTAGGGGTGAGTTGGTTGCTTCTCTATTGATTAATAGTGGGGAGTGGGACGTTGGTAACGTTGGTGATGATTTTGTTGAGGAGGGGGCTACACTGATACTTTCTATCTGGGTGAATGGACTTCGGAGAGATGACGAGATCTATTGGGTGTTGGATAAAAAGGGGGCTTTCTCCGTGAAAAGTGCATATAAGCTCGGTTTATATCTTGCCTCTCTCGGGGAGGGTTCATCATCCTCATCAGAGGCGACTGTGGTGGTATGGAATTGTCTTTGGAATAGTTCCTTACCAATGAAGGTTAAGCTTTGTTGTTGGCGAGTGTTCTTAGGTATTCTTCCTTCTCGGGAAAATCTTGTGGGCAAGGGATTGGACCTTGACTCGCGGTGCCCTTTGTGTGAAGGAAAGCCTGAGACATCGGTACATCTTTTATAG

Coding sequence (CDS)

ATGTGGCGAAATATCTTGTGGGGTTGTGAGTTATTTGTTAGGGGGTATTGTTGGCAGGTCGGGAATGGCTTGTCCATTAGAATTGAGGAGAATCCTTGGCTCCCTAGGCCTGGGAGTGGTTTGGTGAACCTGAGTGACAGTTGTAGGGGTGAGTTGGTTGCTTCTCTATTGATTAATAGTGGGGAGTGGGACGTTGGTAACGTTGGTGATGATTTTGTTGAGGAGGGGGCTACACTGATACTTTCTATCTGGGTGAATGGACTTCGGAGAGATGACGAGATCTATTGGGTGTTGGATAAAAAGGGGGCTTTCTCCGTGAAAAGTGCATATAAGCTCGGTTTATATCTTGCCTCTCTCGGGGAGGGTTCATCATCCTCATCAGAGGCGACTGTGGTGGTATGGAATTGTCTTTGGAATAGTTCCTTACCAATGAAGGTTAAGCTTTGTTGTTGGCGAGTGTTCTTAGGTATTCTTCCTTCTCGGGAAAATCTTGTGGGCAAGGGATTGGACCTTGACTCGCGGTGCCCTTTGTGTGAAGGAAAGCCTGAGACATCGGTACATCTTTTATAG

Protein sequence

MWRNILWGCELFVRGYCWQVGNGLSIRIEENPWLPRPGSGLVNLSDSCRGELVASLLINSGEWDVGNVGDDFVEEGATLILSIWVNGLRRDDEIYWVLDKKGAFSVKSAYKLGLYLASLGEGSSSSSEATVVVWNCLWNSSLPMKVKLCCWRVFLGILPSRENLVGKGLDLDSRCPLCEGKPETSVHLL

Homology

[Close]

BLAST of HG10018372 vs. NCBI nr
Match: EEC72938.1 (hypothetical protein OsI_06800 [Oryza sativa Indica Group])

HSP 1 Score: 146.0 bits (367), Expect = 3.3e-31
Identity = 72/189 (38.10%), Postives = 102/189 (53.97%), Query Frame = 0


Query: 2   WRNILWGCELFVRGYCWQVGNGLSIRIEENPWLPRPGSGL-VNLSDSCRGELVASLLINS 61
           WR I +G EL  +G  W++GNG S+R+  +PW+PR  S   ++   +CR   V+ L+  S
Sbjct: 315 WRAIEYGLELLKKGIIWRIGNGKSVRLWRDPWIPRSFSRRPISAKRNCRLRWVSDLIDQS 374

Query: 62  GEWDVGNVGDDFVEEGATLILSIWVNGLRRDDEIYWVLDKKGAFSVKSAYKLGLYLASLG 121
             WD   +   F+   A  IL+I ++    DD I W  D+ G FSV+SAY L + LA + 
Sbjct: 375 ESWDTDKISQHFLPMDAEAILNIRLSSRLEDDFIAWHPDRLGRFSVRSAYHLAIALAQVD 434

Query: 122 EGSSSSSEATVVVWNCLWNSSLPMKVKLCCWRVFLGILPSRENLVGKGLDLDSRCPLCEG 181
           EGSSSS       WN LW  + P KVK+  WR     LP+ EN   + L++   C +C  
Sbjct: 435 EGSSSSGNGNSRAWNALWKCNAPQKVKIFAWRAITNSLPTLENKKKRKLEVSDICTICGV 494

Query: 182 KPETSVHLL 190
           + E  VH L
Sbjct: 495 ESEYVVHAL 503

[Close]

BLAST of HG10018372 vs. NCBI nr
Match: CAH66131.1 (OSIGBa0135L04.5 [Oryza sativa])

HSP 1 Score: 140.6 bits (353), Expect = 1.4e-29
Identity = 76/189 (40.21%), Postives = 102/189 (53.97%), Query Frame = 0


Query: 2   WRNILWGCELFVRGYCWQVGNGLSIRIEENPWLPRPGSGL-VNLSDSCRGELVASLLINS 61
           WR I +G EL  +G  W+VGNG SIRI  +PWLPR  S   + +  +CR + VA L+   
Sbjct: 149 WRAIEYGLELLKKGIIWRVGNGHSIRIWRDPWLPRNHSRRPITVRGNCRTKWVADLMGVD 208

Query: 62  GEWDVGNVGDDFVEEGATLILSIWVNGLRRDDEIYWVLDKKGAFSVKSAYKLGLYLASLG 121
           G WD   V   F    A LIL+I ++    +D + W  DK G FSV+SAYKL L LA++ 
Sbjct: 209 GTWDEQVVKRIFWPMDAELILTIRLSARAEEDFLAWHPDKWGVFSVRSAYKLALQLAAID 268

Query: 122 EGSSSSSEATVVVWNCLWNSSLPMKVKLCCWRVFLGILPSRENLVGKGLDLDSRCPLCEG 181
            GS SS   T   WN +W  ++P KVK+  WR     L + EN   + L+    C +C  
Sbjct: 269 NGSGSSEAETSKAWNLVWKCNVPQKVKVFTWRAATNSLATMENKNKRKLEATGTCGICGV 328

Query: 182 KPETSVHLL 190
           + E   H L
Sbjct: 329 EAEDVAHAL 337

[Close]

BLAST of HG10018372 vs. NCBI nr
Match: EEC84030.1 (hypothetical protein OsI_30257 [Oryza sativa Indica Group])

HSP 1 Score: 139.8 bits (351), Expect = 2.4e-29
Identity = 68/189 (35.98%), Postives = 101/189 (53.44%), Query Frame = 0


Query: 2   WRNILWGCELFVRGYCWQVGNGLSIRIEENPWLPRPGSGL-VNLSDSCRGELVASLLINS 61
           WR I +G EL  +G  W +GNG S+++  +PW+PR  S   ++   +CR   V+ L+  S
Sbjct: 44  WRAIEYGLELLKKGIIWHIGNGKSVKLWRDPWIPRSYSRRPISAKRNCRLRWVSDLIDRS 103

Query: 62  GEWDVGNVGDDFVEEGATLILSIWVNGLRRDDEIYWVLDKKGAFSVKSAYKLGLYLASLG 121
           G WD   +   F+      IL+I ++    +D I W  D+ G FSV+SAY L + LA + 
Sbjct: 104 GSWDTDKISHHFLPMDVEAILNIRLSSRLEEDFIAWHPDRLGRFSVRSAYHLAVALAQVD 163

Query: 122 EGSSSSSEATVVVWNCLWNSSLPMKVKLCCWRVFLGILPSRENLVGKGLDLDSRCPLCEG 181
           +GSSSS   +   WN LW  + P KVK+  WR     L + EN   + L++   C +C  
Sbjct: 164 DGSSSSGNGSSRAWNALWKCNAPQKVKIFAWRAITNSLTTLENKKKRKLEVSDICTICGV 223

Query: 182 KPETSVHLL 190
           + E  VH L
Sbjct: 224 ESEYVVHAL 232

[Close]

BLAST of HG10018372 vs. NCBI nr
Match: XP_025877173.1 (uncharacterized protein LOC107278050 isoform X1 [Oryza sativa Japonica Group] >XP_025877174.1 uncharacterized protein LOC107278050 isoform X1 [Oryza sativa Japonica Group] >XP_025877175.1 uncharacterized protein LOC107278050 isoform X1 [Oryza sativa Japonica Group] >XP_025877176.1 uncharacterized protein LOC107278050 isoform X1 [Oryza sativa Japonica Group] >XP_025877177.1 uncharacterized protein LOC107278050 isoform X1 [Oryza sativa Japonica Group] >XP_025877178.1 uncharacterized protein LOC107278050 isoform X1 [Oryza sativa Japonica Group] >XP_025877179.1 uncharacterized protein LOC107278050 isoform X1 [Oryza sativa Japonica Group] >XP_025877180.1 uncharacterized protein LOC107278050 isoform X1 [Oryza sativa Japonica Group])

HSP 1 Score: 138.7 bits (348), Expect = 5.3e-29
Identity = 72/189 (38.10%), Postives = 105/189 (55.56%), Query Frame = 0


Query: 2   WRNILWGCELFVRGYCWQVGNGLSIRIEENPWLPRPGSGL-VNLSDSCRGELVASLLINS 61
           WR I++G EL  +G  W+VGNG SIR+  +PW+PR  S   V +  +CR + V+ L+   
Sbjct: 7   WRAIIYGLELLKKGIIWRVGNGQSIRMWRDPWIPRDHSRRPVTMRGNCRLKWVSDLIGQD 66

Query: 62  GEWDVGNVGDDFVEEGATLILSIWVNGLRRDDEIYWVLDKKGAFSVKSAYKLGLYLASLG 121
           G WDV  +   F+     LILSI ++  + +D + W LDK G FSV+SAY L   LA+  
Sbjct: 67  GTWDVAQIRRCFLNIDTELILSICLSPRQEEDFLAWHLDKFGRFSVRSAYNLACRLANTE 126

Query: 122 EGSSSSSEATVVVWNCLWNSSLPMKVKLCCWRVFLGILPSRENLVGKGLDLDSRCPLCEG 181
             SSSS+  +   W+ +W   LP K+K+  W+V    L + +N   + L     C +C  
Sbjct: 127 GSSSSSALHSRKSWDLIWKCKLPQKIKIFAWKVASNCLATMDNKRKRKLVNSDICIICNR 186

Query: 182 KPETSVHLL 190
           + E SVH L
Sbjct: 187 EVENSVHAL 195

[Close]

BLAST of HG10018372 vs. NCBI nr
Match: AAK39575.1 (putative reverse transcriptase [Oryza sativa Japonica Group] >AAP54636.1 retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group])

HSP 1 Score: 137.9 bits (346), Expect = 9.1e-29
Identity = 69/189 (36.51%), Postives = 100/189 (52.91%), Query Frame = 0


Query: 2   WRNILWGCELFVRGYCWQVGNGLSIRIEENPWLPRPGSGL-VNLSDSCRGELVASLLINS 61
           WR+I +G +L  +G  W+VGNG SIRI  +PWLPR  S   +    +CR + V+ L+   
Sbjct: 318 WRSIEYGLDLLKKGIIWRVGNGNSIRIWRDPWLPRDHSRRPITGKANCRLKWVSDLITED 377

Query: 62  GEWDVGNVGDDFVEEGATLILSIWVNGLRRDDEIYWVLDKKGAFSVKSAYKLGLYLASLG 121
           G WDV  +   F    A +IL+I ++    +D I W  DK G FSV+SAY+L   L ++ 
Sbjct: 378 GSWDVPKIHQYFHNLDAEVILNICISSRSEEDFIAWHPDKNGMFSVRSAYRLAAQLVNIE 437

Query: 122 EGSSSSSEATVVVWNCLWNSSLPMKVKLCCWRVFLGILPSRENLVGKGLDLDSRCPLCEG 181
           E SSS +      W  +W   +P KVK+  WRV    L +  N   + L+    C +C+ 
Sbjct: 438 ESSSSGTNNINKAWEMIWKCKVPQKVKIFAWRVASNCLATMVNKKKRKLEQSDMCQICDR 497

Query: 182 KPETSVHLL 190
           + E   H L
Sbjct: 498 ENEDDAHAL 506

[Close]

BLAST of HG10018372 vs. ExPASy TrEMBL
Match: B8AFP4 (Reverse transcriptase domain-containing protein OS=Oryza sativa subsp. indica OX=39946 GN=OsI_06800 PE=4 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 1.6e-31
Identity = 72/189 (38.10%), Postives = 102/189 (53.97%), Query Frame = 0


Query: 2   WRNILWGCELFVRGYCWQVGNGLSIRIEENPWLPRPGSGL-VNLSDSCRGELVASLLINS 61
           WR I +G EL  +G  W++GNG S+R+  +PW+PR  S   ++   +CR   V+ L+  S
Sbjct: 315 WRAIEYGLELLKKGIIWRIGNGKSVRLWRDPWIPRSFSRRPISAKRNCRLRWVSDLIDQS 374

Query: 62  GEWDVGNVGDDFVEEGATLILSIWVNGLRRDDEIYWVLDKKGAFSVKSAYKLGLYLASLG 121
             WD   +   F+   A  IL+I ++    DD I W  D+ G FSV+SAY L + LA + 
Sbjct: 375 ESWDTDKISQHFLPMDAEAILNIRLSSRLEDDFIAWHPDRLGRFSVRSAYHLAIALAQVD 434

Query: 122 EGSSSSSEATVVVWNCLWNSSLPMKVKLCCWRVFLGILPSRENLVGKGLDLDSRCPLCEG 181
           EGSSSS       WN LW  + P KVK+  WR     LP+ EN   + L++   C +C  
Sbjct: 435 EGSSSSGNGNSRAWNALWKCNAPQKVKIFAWRAITNSLPTLENKKKRKLEVSDICTICGV 494

Query: 182 KPETSVHLL 190
           + E  VH L
Sbjct: 495 ESEYVVHAL 503

[Close]

BLAST of HG10018372 vs. ExPASy TrEMBL
Match: Q01M84 (OSIGBa0135L04.5 protein OS=Oryza sativa OX=4530 GN=OSIGBa0135L04.5 PE=4 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 6.8e-30
Identity = 76/189 (40.21%), Postives = 102/189 (53.97%), Query Frame = 0


Query: 2   WRNILWGCELFVRGYCWQVGNGLSIRIEENPWLPRPGSGL-VNLSDSCRGELVASLLINS 61
           WR I +G EL  +G  W+VGNG SIRI  +PWLPR  S   + +  +CR + VA L+   
Sbjct: 149 WRAIEYGLELLKKGIIWRVGNGHSIRIWRDPWLPRNHSRRPITVRGNCRTKWVADLMGVD 208

Query: 62  GEWDVGNVGDDFVEEGATLILSIWVNGLRRDDEIYWVLDKKGAFSVKSAYKLGLYLASLG 121
           G WD   V   F    A LIL+I ++    +D + W  DK G FSV+SAYKL L LA++ 
Sbjct: 209 GTWDEQVVKRIFWPMDAELILTIRLSARAEEDFLAWHPDKWGVFSVRSAYKLALQLAAID 268

Query: 122 EGSSSSSEATVVVWNCLWNSSLPMKVKLCCWRVFLGILPSRENLVGKGLDLDSRCPLCEG 181
            GS SS   T   WN +W  ++P KVK+  WR     L + EN   + L+    C +C  
Sbjct: 269 NGSGSSEAETSKAWNLVWKCNVPQKVKVFTWRAATNSLATMENKNKRKLEATGTCGICGV 328

Query: 182 KPETSVHLL 190
           + E   H L
Sbjct: 329 EAEDVAHAL 337

[Close]

BLAST of HG10018372 vs. ExPASy TrEMBL
Match: B8B9K5 (zf-RVT domain-containing protein OS=Oryza sativa subsp. indica OX=39946 GN=OsI_30257 PE=4 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 1.2e-29
Identity = 68/189 (35.98%), Postives = 101/189 (53.44%), Query Frame = 0


Query: 2   WRNILWGCELFVRGYCWQVGNGLSIRIEENPWLPRPGSGL-VNLSDSCRGELVASLLINS 61
           WR I +G EL  +G  W +GNG S+++  +PW+PR  S   ++   +CR   V+ L+  S
Sbjct: 44  WRAIEYGLELLKKGIIWHIGNGKSVKLWRDPWIPRSYSRRPISAKRNCRLRWVSDLIDRS 103

Query: 62  GEWDVGNVGDDFVEEGATLILSIWVNGLRRDDEIYWVLDKKGAFSVKSAYKLGLYLASLG 121
           G WD   +   F+      IL+I ++    +D I W  D+ G FSV+SAY L + LA + 
Sbjct: 104 GSWDTDKISHHFLPMDVEAILNIRLSSRLEEDFIAWHPDRLGRFSVRSAYHLAVALAQVD 163

Query: 122 EGSSSSSEATVVVWNCLWNSSLPMKVKLCCWRVFLGILPSRENLVGKGLDLDSRCPLCEG 181
           +GSSSS   +   WN LW  + P KVK+  WR     L + EN   + L++   C +C  
Sbjct: 164 DGSSSSGNGSSRAWNALWKCNAPQKVKIFAWRAITNSLTTLENKKKRKLEVSDICTICGV 223

Query: 182 KPETSVHLL 190
           + E  VH L
Sbjct: 224 ESEYVVHAL 232

[Close]

BLAST of HG10018372 vs. ExPASy TrEMBL
Match: Q94HY0 (Retrotransposon protein, putative, unclassified OS=Oryza sativa subsp. japonica OX=39947 GN=LOC_Os10g37370 PE=4 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 4.4e-29
Identity = 69/189 (36.51%), Postives = 100/189 (52.91%), Query Frame = 0


Query: 2   WRNILWGCELFVRGYCWQVGNGLSIRIEENPWLPRPGSGL-VNLSDSCRGELVASLLINS 61
           WR+I +G +L  +G  W+VGNG SIRI  +PWLPR  S   +    +CR + V+ L+   
Sbjct: 318 WRSIEYGLDLLKKGIIWRVGNGNSIRIWRDPWLPRDHSRRPITGKANCRLKWVSDLITED 377

Query: 62  GEWDVGNVGDDFVEEGATLILSIWVNGLRRDDEIYWVLDKKGAFSVKSAYKLGLYLASLG 121
           G WDV  +   F    A +IL+I ++    +D I W  DK G FSV+SAY+L   L ++ 
Sbjct: 378 GSWDVPKIHQYFHNLDAEVILNICISSRSEEDFIAWHPDKNGMFSVRSAYRLAAQLVNIE 437

Query: 122 EGSSSSSEATVVVWNCLWNSSLPMKVKLCCWRVFLGILPSRENLVGKGLDLDSRCPLCEG 181
           E SSS +      W  +W   +P KVK+  WRV    L +  N   + L+    C +C+ 
Sbjct: 438 ESSSSGTNNINKAWEMIWKCKVPQKVKIFAWRVASNCLATMVNKKKRKLEQSDMCQICDR 497

Query: 182 KPETSVHLL 190
           + E   H L
Sbjct: 498 ENEDDAHAL 506

[Close]

BLAST of HG10018372 vs. ExPASy TrEMBL
Match: A0A5S6RD43 (Putative reverse transcriptase OS=Oryza sativa subsp. japonica OX=39947 GN=OSJNBa0076F20.17 PE=4 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 4.4e-29
Identity = 69/189 (36.51%), Postives = 100/189 (52.91%), Query Frame = 0


Query: 2   WRNILWGCELFVRGYCWQVGNGLSIRIEENPWLPRPGSGL-VNLSDSCRGELVASLLINS 61
           WR+I +G +L  +G  W+VGNG SIRI  +PWLPR  S   +    +CR + V+ L+   
Sbjct: 318 WRSIEYGLDLLKKGIIWRVGNGNSIRIWRDPWLPRDHSRRPITGKANCRLKWVSDLITED 377

Query: 62  GEWDVGNVGDDFVEEGATLILSIWVNGLRRDDEIYWVLDKKGAFSVKSAYKLGLYLASLG 121
           G WDV  +   F    A +IL+I ++    +D I W  DK G FSV+SAY+L   L ++ 
Sbjct: 378 GSWDVPKIHQYFHNLDAEVILNICISSRSEEDFIAWHPDKNGMFSVRSAYRLAAQLVNIE 437

Query: 122 EGSSSSSEATVVVWNCLWNSSLPMKVKLCCWRVFLGILPSRENLVGKGLDLDSRCPLCEG 181
           E SSS +      W  +W   +P KVK+  WRV    L +  N   + L+    C +C+ 
Sbjct: 438 ESSSSGTNNINKAWEMIWKCKVPQKVKIFAWRVASNCLATMVNKKKRKLEQSDMCQICDR 497

Query: 182 KPETSVHLL 190
           + E   H L
Sbjct: 498 ENEDDAHAL 506

The following BLAST results are available for this feature:

BLAST of HG10018372 vs. NCBI nr


Match Name	E-value	Identity	Description
EEC72938.1	3.3e-31	38.10	hypothetical protein OsI_06800 [Oryza sativa Indica Group]	[more]
CAH66131.1	1.4e-29	40.21	OSIGBa0135L04.5 [Oryza sativa]	[more]
EEC84030.1	2.4e-29	35.98	hypothetical protein OsI_30257 [Oryza sativa Indica Group]	[more]
XP_025877173.1	5.3e-29	38.10	uncharacterized protein LOC107278050 isoform X1 [Oryza sativa Japonica Group] >X...	[more]
AAK39575.1	9.1e-29	36.51	putative reverse transcriptase [Oryza sativa Japonica Group] >AAP54636.1 retrotr...	[more]

BLAST of HG10018372 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of HG10018372 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
B8AFP4	1.6e-31	38.10	Reverse transcriptase domain-containing protein OS=Oryza sativa subsp. indica OX...	[more]
Q01M84	6.8e-30	40.21	OSIGBa0135L04.5 protein OS=Oryza sativa OX=4530 GN=OSIGBa0135L04.5 PE=4 SV=1	[more]
B8B9K5	1.2e-29	35.98	zf-RVT domain-containing protein OS=Oryza sativa subsp. indica OX=39946 GN=OsI_3...	[more]
Q94HY0	4.4e-29	36.51	Retrotransposon protein, putative, unclassified OS=Oryza sativa subsp. japonica ...	[more]
A0A5S6RD43	4.4e-29	36.51	Putative reverse transcriptase OS=Oryza sativa subsp. japonica OX=39947 GN=OSJNB...	[more]

BLAST of HG10018372 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR026960	Reverse transcriptase zinc-binding domain	PFAM	PF13966	zf-RVT	coord: 104..189 e-value: 4.1E-13 score: 49.8
None	No IPR available	PANTHER	PTHR46736:SF6	SUBFAMILY NOT NAMED	coord: 13..189
None	No IPR available	PANTHER	PTHR46736	FAMILY NOT NAMED	coord: 13..189

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10018372.1	HG10018372.1	mRNA