HG10018196 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10018196
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	double-stranded RNA-binding protein 2
Location	Chr04: 1482693 .. 1486932 (+)
RNA-Seq Expression	HG10018196
Synteny	HG10018196

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTACAAGAACCAGCTTCAAGAGCTGGCGCAGAGAAGTTGCTTCAATCTTCCCTCGTATACCTGCATTAGGGAAGGACCGGACCATGCGCCAAGGTTTAAAGCTACTGTTAACTTCAATGGAGAGATCTTTGAATGCCCTCAGTACTGCTCTACCCTCCGCCAGGCCGAGCACTCTGCCGCTGAGGTCGCCTTGAACGCCCTCTCTAACCGTGGTCCCCCTCATTCGCTTGCGGCTAGGATCCTGGTGAGTCCTTTTTTGTTCTTTTTTTTTTTTCAAAAAACTTTGGTCAAGCGGTTGCTTTGTTTTTGTTCTTGTCTTCCGGCTTGCTTCCCTGCTTGATCTTCATTTCTGGGTTGTTTTGATTTAATGAATCGATGCTACTGTTTGCAGTAGGATTTGCTTCTGCAAGTTGGGAAAATTAGTAATTAGTTTTAGGTTTTTTGTTATGTTAGTGTTCGTTGTGCATTTTGTTCTTGTTCTCCTCCTCTGAGCTTCTGTTATCATGTCCGGTTTGTGCGGGTAAGAAGCTAGGTTAAATTGAAATTGCACAATTGTGCATTTTGTTAGCTTGGGTGCCCTTAGCTCAGCTGTAGTACTTAATCCGTGAATATCTTGGTTGGTGGCTTAACTAAGATCTAAGCGAGATGGTTGTTCTGCTATTTGGGGTTGAAATGATCGTTGTGCCATCGATTAGGTTTGGCATTTTCTTCTAAGTTATGAGACGATCTTCTGATCTCTCTGATCGGCCGGAATTCTCCGACTAGGCCTTTTTACGGTTTAGGGTCATCTTTGAACGAAAAGTATGAACTCGTGGATGCCTCTTTGAGGGTCCGTTCCATGAGAAGAGGTATCAAGTTTTTGTTTACCTTATTATCTCGGAGCCAGCTGTCGGGAGTAGTCTTCTTGGGCAAGTTGGTGTAATTAATTTTCTCATTAATGGGTTTGTCGGTCATCCAATTGTGTTTTCGGTAGCTCCCAACTTTGGCCCATTTTATTTCTCCGATCTCATAAATGATCAGATGGGTATCGTAGAAACGGCAGGGACCAGGAATCTAGCACCAATGGTGATAAATTTGTTGGAGGCTGAGTTTCAGATAGAGATTATCCAAGTAGACCAATTAGAAATTAGGAAGATGTTTTCATTATCTTTGTTTATACAAGTCTTGAGGCTTTAAAACTTGGGTTCATTCATTAATTTTATGTAATTACTCCTCCCCGCGTTTCGGTACAAATTGTTTGACTAAGTTTTCTTCTTCGTTGTTTTTAAAGTTTTATTTACCCCTTTCGCCGTTCGAGAAAATGTGTGCATGTGTCTCTGTCAACTTTATTGTGTTTGAAGAGGCAGATGAGGAATTTTCGGTGGATAGTTAGGGGGTTACTTTTCCATGGACGTCGTTGTGTTCCAATAAGATGAATGTCCTGATATGGAGCTTCCTAATGTATCGCCCTAGTGATTTCAGTAAAATCAGGCTTTGTTTGCATAAGTTGCTAAAAATATAAAATATTTTGTTTCTGTTGGTCGCTGAGGCGCACAGCCTGGTTAATTGATGTTTCTTAGGTTGAGTAATTTATTGCTGATTACCTCGTTGTTTTCTTATTCTCTCTCTCTCTCTCTCTCTCTCCCTTGTGGTTGTGGCTGGTAATAACTCATTTAATAAAGTTAAATTTGTTTAAAGTTATTAACTATGTTTCAATTTCTCTCACCCCTCAGCTAATATCTCTTTTAAAAATAAGAAATAAAGATGCTCTTCCTAAATGGAGAATGTATCTGATGTTTGATATAACTATTTAGCAACCGTGTTCTTTAACTAGTTCACTACTGTAAACTTCAAATTGTAACTTTGAACTTTTATCCAAAAAGATGTGCCCATGAAATAGAGGTCTAGTGGTTAAGTGGTGGCCTGGTGGGTGTTGACTGATGAAACAACATTTCCACTTTAATGGAGTTTCACTATGCAAAGCAGCAGATTAATGATCTAGAATGGAAAAATTGGAGCTTATAGATAGCTTATTATTTGCGTACAGCTTGTGATTTTGATAAAATTATGAAACATGCCTCTTAGAATTCAATTGAATTCAGTTTTAAACAGTAGAGGTATTACAAATCAAATTATAATGTAGATTAGCCTCAAGTTCAGATTACCTCAAGACAAATGCTGCACTTGTCCCTTTATTAAAGAGTGAGGAAACTTGTTGCACCGTAGAAATTGATCAACTGGAGTCTGCAGTTTTCTCAACACAAACTTAATTTACAGATTTCTTCAATTTGAAGTATTATTAGTGATGAAGATGGTTGTCTGGGCAGCAGATCTCTCAGATGAAATTATTATTTGAAAGTCTAAAGTGTTTCTAGATTCAAATAATGTTGAGAATATGAAGTACATTATGAATAATTGAAAACATGACATGTATCCATACCAATAGTTTTCATAACTGAGTAATATTTCTGGTTAGCTTATTCCTTGTACTATCTGCTAAAATGTAAAATGCATATAAGATATTTTCGTTGAATTATTGTAAAAGAAAAGATTTATGAAATCTACTAATTCTCTTGGGCATAGAATTTGTGAACTTCTCTTTTGATATTGTTCATATGTCTGTAAAATGTTCTTGATACGAATTAAAGATGCTTCTTATATCTATGCATGAGCTGACTTGGCCGATTTTTAGTTTAATTACTTACTATAATCATCTGTAATCAGGATGAGACAGGAGTTTACAAGAACCTCCTGCAGGAAATTGCCCAAAGAGTTGGAGCGCCGTTGCCACAATATACAACATTCAGATCAGGCCTTGGTCACCTACCTGTTTTTACAGGGATAGTAGAATTGGCTGGAATAACGTTTACTGGAGAACCTGCCAAGAACAAAAAACAAGCAGAGAAAAATGCTGCAATGGCAGCTTGGTCATCTTTAAAACAATGTGAGTTATATATATATAATTTATAATGTATACCATGATTTTTATCCTGAACATAGAGAGAATAGACCATCATATTTTGTGTAAGCAAATATATGCAAGCCATATATGATCTTATCTGCTGGAACATGGAGATCAAAATTCAAAAGGATCCTCTGCGATATGTTTATGGGAAAGTTCTTTATTATAGAGCTATTATTTCCTATGGAAGTTAAATATCTTATCTTGATGGCTTCCGCCATGCTTTAAAAATCAAATATTTTGCCTCCATCAATTTTTATAATTCGAGTCTGTAAACGTGACTAAGATTTTGAGAGGAGTAAGAGCACACACTTTTGAATTGCTTCTTAATATAATATCAATTGCGAACATACTTTATTATCATTCATAGTTCCCACTTCCCATAATTTTATTCTAAGAAAATTGTTTACCTTACTATGGTGCTTTTTATTTATTTATTTTTATTTTTGACGTTTTGTTTTAATTTTGGCTAGTGGCTAAAGAATCAGCAAGCTCTTCATCAGAACCAGAAAATAATGATGAGCTGGAGCAGATCACTATAGCTCGAGCCTTATTGAACTATCGCCAAAAAGAAAAAATGGCCATGTCAAATCCAAATGCAACAATACCATTCCACAAAAAACTTCAAATTCAAACTCCAAGGCCAACTAGTCCCCAACGTCCCCCTGCTCCCACATCGAAGATTCTTCCCTTAATTTGCCAAAAGGCAGCTCCTCGAAGCAGAGCTCCATTTTCAGCAAATAAAATCCCCATTCCTCAATCCCAAACTCCTGCACTAGAAGCCTCTGGAACCCGCCCTCAGAAGTTCAGTGCCGGAGCTGCTCTTTCTTATATTCCCGTTCATCAGTTTAGGACATCTTGCCATGGTATTGCCCCACCAGTTACAATCAGAACAGCAATGCCTGTGTATTCTGCCCCGCCTCTACCGCAACCATCGAAGCTTCCACCACAGCAAGTAATTCGAGTCCCACCCGTACGGATCGCCCCACCGGTTTCTATTAGGCAAGCAATTCCTGTCTTTGCTGCTCCCCCAGTACGCAAGGAAAATCCTCCCATAGTTAAAAAAGAAGATTGCCCAGCTCCAGCTGCTCCAAAAGATGACCCTTCTGCTCTTTCCGCGCCTGTGCCCTCACCGCCCACTGTATCACTGCCCGTGCCCTCACCGCCCACTGTATCACCACCCGTGCCTTCACTGCCCATTGTATCACCTGCTGAAGTAGAACAAGCTACATCCACAGTGGTGAACAGTCAGCAAGAAACTAAGACAATAGAGAACCTCAAAGAACTCAAAATTTGA

mRNA sequence

ATGTACAAGAACCAGCTTCAAGAGCTGGCGCAGAGAAGTTGCTTCAATCTTCCCTCGTATACCTGCATTAGGGAAGGACCGGACCATGCGCCAAGGTTTAAAGCTACTGTTAACTTCAATGGAGAGATCTTTGAATGCCCTCAGTACTGCTCTACCCTCCGCCAGGCCGAGCACTCTGCCGCTGAGGTCGCCTTGAACGCCCTCTCTAACCGTGGTCCCCCTCATTCGCTTGCGGCTAGGATCCTGGATGAGACAGGAGTTTACAAGAACCTCCTGCAGGAAATTGCCCAAAGAGTTGGAGCGCCGTTGCCACAATATACAACATTCAGATCAGGCCTTGGTCACCTACCTGTTTTTACAGGGATAGTAGAATTGGCTGGAATAACGTTTACTGGAGAACCTGCCAAGAACAAAAAACAAGCAGAGAAAAATGCTGCAATGGCAGCTTGGTCATCTTTAAAACAATTGGCTAAAGAATCAGCAAGCTCTTCATCAGAACCAGAAAATAATGATGAGCTGGAGCAGATCACTATAGCTCGAGCCTTATTGAACTATCGCCAAAAAGAAAAAATGGCCATGTCAAATCCAAATGCAACAATACCATTCCACAAAAAACTTCAAATTCAAACTCCAAGGCCAACTAGTCCCCAACGTCCCCCTGCTCCCACATCGAAGATTCTTCCCTTAATTTGCCAAAAGGCAGCTCCTCGAAGCAGAGCTCCATTTTCAGCAAATAAAATCCCCATTCCTCAATCCCAAACTCCTGCACTAGAAGCCTCTGGAACCCGCCCTCAGAAGTTCAGTGCCGGAGCTGCTCTTTCTTATATTCCCGTTCATCAGTTTAGGACATCTTGCCATGGTATTGCCCCACCAGTTACAATCAGAACAGCAATGCCTGTGTATTCTGCCCCGCCTCTACCGCAACCATCGAAGCTTCCACCACAGCAAGTAATTCGAGTCCCACCCGTACGGATCGCCCCACCGGTTTCTATTAGGCAAGCAATTCCTGTCTTTGCTGCTCCCCCAGTACGCAAGGAAAATCCTCCCATAGTTAAAAAAGAAGATTGCCCAGCTCCAGCTGCTCCAAAAGATGACCCTTCTGCTCTTTCCGCGCCTGTGCCCTCACCGCCCACTGTATCACTGCCCGTGCCCTCACCGCCCACTGTATCACCACCCGTGCCTTCACTGCCCATTGTATCACCTGCTGAAGTAGAACAAGCTACATCCACAGTGGTGAACAGTCAGCAAGAAACTAAGACAATAGAGAACCTCAAAGAACTCAAAATTTGA

Coding sequence (CDS)

ATGTACAAGAACCAGCTTCAAGAGCTGGCGCAGAGAAGTTGCTTCAATCTTCCCTCGTATACCTGCATTAGGGAAGGACCGGACCATGCGCCAAGGTTTAAAGCTACTGTTAACTTCAATGGAGAGATCTTTGAATGCCCTCAGTACTGCTCTACCCTCCGCCAGGCCGAGCACTCTGCCGCTGAGGTCGCCTTGAACGCCCTCTCTAACCGTGGTCCCCCTCATTCGCTTGCGGCTAGGATCCTGGATGAGACAGGAGTTTACAAGAACCTCCTGCAGGAAATTGCCCAAAGAGTTGGAGCGCCGTTGCCACAATATACAACATTCAGATCAGGCCTTGGTCACCTACCTGTTTTTACAGGGATAGTAGAATTGGCTGGAATAACGTTTACTGGAGAACCTGCCAAGAACAAAAAACAAGCAGAGAAAAATGCTGCAATGGCAGCTTGGTCATCTTTAAAACAATTGGCTAAAGAATCAGCAAGCTCTTCATCAGAACCAGAAAATAATGATGAGCTGGAGCAGATCACTATAGCTCGAGCCTTATTGAACTATCGCCAAAAAGAAAAAATGGCCATGTCAAATCCAAATGCAACAATACCATTCCACAAAAAACTTCAAATTCAAACTCCAAGGCCAACTAGTCCCCAACGTCCCCCTGCTCCCACATCGAAGATTCTTCCCTTAATTTGCCAAAAGGCAGCTCCTCGAAGCAGAGCTCCATTTTCAGCAAATAAAATCCCCATTCCTCAATCCCAAACTCCTGCACTAGAAGCCTCTGGAACCCGCCCTCAGAAGTTCAGTGCCGGAGCTGCTCTTTCTTATATTCCCGTTCATCAGTTTAGGACATCTTGCCATGGTATTGCCCCACCAGTTACAATCAGAACAGCAATGCCTGTGTATTCTGCCCCGCCTCTACCGCAACCATCGAAGCTTCCACCACAGCAAGTAATTCGAGTCCCACCCGTACGGATCGCCCCACCGGTTTCTATTAGGCAAGCAATTCCTGTCTTTGCTGCTCCCCCAGTACGCAAGGAAAATCCTCCCATAGTTAAAAAAGAAGATTGCCCAGCTCCAGCTGCTCCAAAAGATGACCCTTCTGCTCTTTCCGCGCCTGTGCCCTCACCGCCCACTGTATCACTGCCCGTGCCCTCACCGCCCACTGTATCACCACCCGTGCCTTCACTGCCCATTGTATCACCTGCTGAAGTAGAACAAGCTACATCCACAGTGGTGAACAGTCAGCAAGAAACTAAGACAATAGAGAACCTCAAAGAACTCAAAATTTGA

Protein sequence

MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSAAEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFTGIVELAGITFTGEPAKNKKQAEKNAAMAAWSSLKQLAKESASSSSEPENNDELEQITIARALLNYRQKEKMAMSNPNATIPFHKKLQIQTPRPTSPQRPPAPTSKILPLICQKAAPRSRAPFSANKIPIPQSQTPALEASGTRPQKFSAGAALSYIPVHQFRTSCHGIAPPVTIRTAMPVYSAPPLPQPSKLPPQQVIRVPPVRIAPPVSIRQAIPVFAAPPVRKENPPIVKKEDCPAPAAPKDDPSALSAPVPSPPTVSLPVPSPPTVSPPVPSLPIVSPAEVEQATSTVVNSQQETKTIENLKELKI

Homology

[Close]

BLAST of HG10018196 vs. NCBI nr
Match: XP_038894734.1 (double-stranded RNA-binding protein 2 [Benincasa hispida])

HSP 1 Score: 782.3 bits (2019), Expect = 2.1e-222
Identity = 410/429 (95.57%), Postives = 419/429 (97.67%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60
           MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120
           AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT
Sbjct: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120

Query: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSSLKQLAKESASSSSEPENNDELEQITIAR 180
           GIVELAGITFTGEPAKNKKQAEKNAAMAAWS+LKQLAKESASSSSEPENNDELEQITIAR
Sbjct: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKESASSSSEPENNDELEQITIAR 180

Query: 181 ALLNYRQKEKMAMSNPNATIPFHKKLQIQTPRPTSPQRPPAPTSKILPLICQKAAPRSRA 240
           ALLNYRQKEK+AMSNPNATIPFHKKLQIQTPRPTSPQRPPAPTSKILPLICQKAAPRSRA
Sbjct: 181 ALLNYRQKEKLAMSNPNATIPFHKKLQIQTPRPTSPQRPPAPTSKILPLICQKAAPRSRA 240

Query: 241 PFSANKIPIPQSQTPALEASGTRPQKFSAGAALSYIPVHQFRTSCHGIAPPVTIRTAMPV 300
           PFSANKIPIPQSQTP LE SGTR QKFSAGAALSYIPV QFRTSCHGIAPPVTIRTAMPV
Sbjct: 241 PFSANKIPIPQSQTPTLEGSGTRAQKFSAGAALSYIPVQQFRTSCHGIAPPVTIRTAMPV 300

Query: 301 YSAPPLPQPSKLPPQQVIRVPPVRIAPPVSIRQAIPVFAAPPVRKENPPIVKKEDCPAPA 360
           YSAPPLPQPSKLPPQQVIRVPPVRIAPPVSIRQAIPVFAAPPVRKENPP+VKKE+CPAPA
Sbjct: 301 YSAPPLPQPSKLPPQQVIRVPPVRIAPPVSIRQAIPVFAAPPVRKENPPVVKKEECPAPA 360

Query: 361 APKDDPSALSAPVPSPPTVSLPVPSPPTVSPPVPSLPIVSPAEVEQATSTVVNSQQETKT 420
           APKDDP+ALSA VPSP TVS PVPSP TVSPPVPSLP VSP EVE+ATSTVVNSQQETKT
Sbjct: 361 APKDDPTALSASVPSPTTVSPPVPSPSTVSPPVPSLPTVSPPEVEEATSTVVNSQQETKT 420

Query: 421 IENLKELKI 430
           +ENL++LKI
Sbjct: 421 LENLEQLKI 429

[Close]

BLAST of HG10018196 vs. NCBI nr
Match: XP_004139447.1 (double-stranded RNA-binding protein 2 [Cucumis sativus] >KGN64845.1 hypothetical protein Csa_022785 [Cucumis sativus])

HSP 1 Score: 744.2 bits (1920), Expect = 6.3e-211
Identity = 393/429 (91.61%), Postives = 405/429 (94.41%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60
           MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120
           AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT
Sbjct: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120

Query: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSSLKQLAKESASSSSEPENNDELEQITIAR 180
           GIVELAGITFTGEPAKNKKQAEKNAAMAAWS+LKQLAKESASSSSEPENNDELEQITIAR
Sbjct: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKESASSSSEPENNDELEQITIAR 180

Query: 181 ALLNYRQKEKMAMSNPNATIPFHKKLQIQTPRPTSPQRPPAPTSKILPLICQKAAPRSRA 240
           ALLNYRQKEK+AMSNPNATIPFHKKLQIQTPRPTSPQRPPAPTSKILPLICQKAAPRSRA
Sbjct: 181 ALLNYRQKEKLAMSNPNATIPFHKKLQIQTPRPTSPQRPPAPTSKILPLICQKAAPRSRA 240

Query: 241 PFSANKIPIPQSQTPALEASGTRPQKFSAGAALSYIPVHQFRTSCHGIAPPVTIRTAMPV 300
           PFSANKIPIPQSQTPALE SG RPQKFSAG ALSYIPV QFRTSCHGIAPPVTIRTAMPV
Sbjct: 241 PFSANKIPIPQSQTPALEGSGPRPQKFSAGTALSYIPVQQFRTSCHGIAPPVTIRTAMPV 300

Query: 301 YSAPPLPQPSKLPPQQVIRVPPVRIAPPVSIRQAIPVFAAPPVRKENPPIVKKEDCPAPA 360
           +SAPPLPQPSKLPPQQVIRVPP+RIAPPVSIRQAIPVFAAPPVRKENPP+VKKE+CPAPA
Sbjct: 301 FSAPPLPQPSKLPPQQVIRVPPIRIAPPVSIRQAIPVFAAPPVRKENPPVVKKEECPAPA 360

Query: 361 APKDDPSALSAPVPSPPTVSLPVPSPPTVSPPVPSLPIVSPAEVEQATSTVVNSQQETKT 420
           APK+DP ALSAP      V++ VPSPPTV         VS AEVEQAT TVVNS +ETKT
Sbjct: 361 APKEDPPALSAP------VTVTVPSPPTV---------VSTAEVEQATFTVVNSPEETKT 414

Query: 421 IENLKELKI 430
           +ENL+ELKI
Sbjct: 421 LENLEELKI 414

[Close]

BLAST of HG10018196 vs. NCBI nr
Match: XP_008462570.1 (PREDICTED: double-stranded RNA-binding protein 2 [Cucumis melo] >KAA0041703.1 double-stranded RNA-binding protein 2 [Cucumis melo var. makuwa])

HSP 1 Score: 738.4 bits (1905), Expect = 3.5e-209
Identity = 391/429 (91.14%), Postives = 401/429 (93.47%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60
           MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120
           AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT
Sbjct: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120

Query: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSSLKQLAKESASSSSEPENNDELEQITIAR 180
           GIVELAGITFTGEPAKNKKQAEKNAAMAAWS+LKQLAKESASSSSEPENNDELEQITIAR
Sbjct: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKESASSSSEPENNDELEQITIAR 180

Query: 181 ALLNYRQKEKMAMSNPNATIPFHKKLQIQTPRPTSPQRPPAPTSKILPLICQKAAPRSRA 240
           ALLNYRQKEK+AMSNPNATIPFHKKLQIQTPRPTSPQRPPAPTSKILPLICQKAAPRSRA
Sbjct: 181 ALLNYRQKEKLAMSNPNATIPFHKKLQIQTPRPTSPQRPPAPTSKILPLICQKAAPRSRA 240

Query: 241 PFSANKIPIPQSQTPALEASGTRPQKFSAGAALSYIPVHQFRTSCHGIAPPVTIRTAMPV 300
           PFSANKIPI QSQTP LE SG RPQKFSAG ALSYIPV QFRTSCHGIAPPVTIRTAMPV
Sbjct: 241 PFSANKIPISQSQTPVLEGSGPRPQKFSAGTALSYIPVQQFRTSCHGIAPPVTIRTAMPV 300

Query: 301 YSAPPLPQPSKLPPQQVIRVPPVRIAPPVSIRQAIPVFAAPPVRKENPPIVKKEDCPAPA 360
           +SAPPLPQPSKLPPQQVIRVPP+RIAPPVSIRQAIPVFAAPPVRKENPP+VKKE+CPAPA
Sbjct: 301 FSAPPLPQPSKLPPQQVIRVPPIRIAPPVSIRQAIPVFAAPPVRKENPPVVKKEECPAPA 360

Query: 361 APKDDPSALSAPVPSPPTVSLPVPSPPTVSPPVPSLPIVSPAEVEQATSTVVNSQQETKT 420
           APK+DP ALSAPV         VPSPPTV         VS AEVEQAT TVVNS +ETKT
Sbjct: 361 APKEDPPALSAPV--------TVPSPPTV---------VSTAEVEQATFTVVNSPEETKT 412

Query: 421 IENLKELKI 430
           +ENL+ELKI
Sbjct: 421 LENLEELKI 412

[Close]

BLAST of HG10018196 vs. NCBI nr
Match: XP_022152917.1 (double-stranded RNA-binding protein 2-like [Momordica charantia])

HSP 1 Score: 714.1 bits (1842), Expect = 7.0e-202
Identity = 382/429 (89.04%), Postives = 394/429 (91.84%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60
           MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120
           AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT
Sbjct: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120

Query: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSSLKQLAKESASSSSEPENNDELEQITIAR 180
           GIVELAGITFTGEPAKNKKQAEKNAAMAAWS+LKQLAKESASSSSEPENNDELEQITIAR
Sbjct: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKESASSSSEPENNDELEQITIAR 180

Query: 181 ALLNYRQKEKMAMSNPNATIPFHKKLQIQTPRPTSPQRPPAPTSKILPLICQKAAPRSRA 240
           ALLNYRQKEKMAMSNPNATIPF KKLQIQ+PRPTSPQRPPAPTSKILPLICQKAAPRSRA
Sbjct: 181 ALLNYRQKEKMAMSNPNATIPFPKKLQIQSPRPTSPQRPPAPTSKILPLICQKAAPRSRA 240

Query: 241 PFSANKIPIPQSQTPALEASGTRPQKFSAGAALSYIPVHQFRTSCHGIAPPVTIRTAMPV 300
           PFS NKI IPQSQTPALE SGTRPQKFSAGAALSYIPV QFRTSCHGIAPPVTIRT MPV
Sbjct: 241 PFSTNKISIPQSQTPALEGSGTRPQKFSAGAALSYIPVPQFRTSCHGIAPPVTIRTTMPV 300

Query: 301 YSAPPLPQPSKLPPQQVIRVPPVRIAPPVSIRQAIPVFAAPPVRKENPPIVKKEDCPAPA 360
           YSAPPLPQPSKLPPQQVIRVPPVRIAPPVSIRQA+PVFAAPPVRKENPP+V+KED   PA
Sbjct: 301 YSAPPLPQPSKLPPQQVIRVPPVRIAPPVSIRQAVPVFAAPPVRKENPPVVRKED--FPA 360

Query: 361 APKDDPSALSAPVPSPPTVSLPVPSPPTVSPPVPSLPIVSPAEVEQATSTVVNSQQETKT 420
           APK+DP     PV       +P PSPPT           SPAEVEQAT+ V NSQQE+KT
Sbjct: 361 APKEDP-----PV-------IPAPSPPT----------TSPAEVEQATTAVANSQQESKT 405

Query: 421 IENLKELKI 430
           +ENL++LKI
Sbjct: 421 LENLEQLKI 405

[Close]

BLAST of HG10018196 vs. NCBI nr
Match: KAG6583583.1 (Double-stranded RNA-binding protein 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019284.1 Double-stranded RNA-binding protein 2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 713.0 bits (1839), Expect = 1.6e-201
Identity = 385/431 (89.33%), Postives = 397/431 (92.11%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60
           MYKNQLQELAQRSCFNLPSY CIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYACIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120
           AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT
Sbjct: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120

Query: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSSLKQLAKESASSSSEPENNDELEQITIAR 180
           GIVELAGITFTGEPAKNKKQAEKNAAMAAWSSLKQLAKESASSSSEPENNDELEQITIAR
Sbjct: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSSLKQLAKESASSSSEPENNDELEQITIAR 180

Query: 181 ALLNYRQKEKMAMSNPNATIPFHKKLQIQTPRPTSPQRPPAPTSKILPLICQKAAPRSRA 240
           ALLNYRQKEKMAMSNPNATIPF KKLQIQ+PRPTSPQRPPAPTSKILPLICQKAAPRSRA
Sbjct: 181 ALLNYRQKEKMAMSNPNATIPFPKKLQIQSPRPTSPQRPPAPTSKILPLICQKAAPRSRA 240

Query: 241 PFSANKIPIPQSQTPALEASGT-RPQKFSAG-AALSYIPVHQFRTSCHGIAPPVTIRTAM 300
           PFSANKIPIP +QT ALE S T RPQKFSAG AALSYIPVHQ+RTSCHGIAPPVTIRT M
Sbjct: 241 PFSANKIPIPHAQTSALEGSATPRPQKFSAGAAALSYIPVHQYRTSCHGIAPPVTIRTTM 300

Query: 301 PVYSAPPLPQPSKLPPQQVIRVPPVRIAPPVSIRQAIPVFAAPPVRKENPPIVKKEDCPA 360
           PVYSAPPLPQP KLPPQQVIRVPPVRIAPPVSIRQAIPVFAAPPVRKEN P VKKEDCPA
Sbjct: 301 PVYSAPPLPQPLKLPPQQVIRVPPVRIAPPVSIRQAIPVFAAPPVRKENAPAVKKEDCPA 360

Query: 361 PAAPKDDPSALSAPVPSPPTVSLPVPSPPTVSPPVPSLPIVSPAEVEQATSTVVNSQQET 420
           PAAPK++   ++AP P      +PVPSPPT           SPAEVEQ T+T+VNSQQET
Sbjct: 361 PAAPKEN---VAAPAP------VPVPSPPT----------ESPAEVEQDTTTLVNSQQET 412

Query: 421 KTIENLKELKI 430
           KT+ENL+ELKI
Sbjct: 421 KTLENLEELKI 412

[Close]

BLAST of HG10018196 vs. ExPASy Swiss-Prot
Match: Q9SKN2 (Double-stranded RNA-binding protein 2 OS=Arabidopsis thaliana OX=3702 GN=DRB2 PE=1 SV=1)

HSP 1 Score: 462.2 bits (1188), Expect = 6.3e-129
Identity = 258/357 (72.27%), Postives = 285/357 (79.83%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60
           MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFE PQYCSTLRQAEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPQYCSTLRQAEHSA 60

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120
           AEVALNALSNRGP HSLAARILDETGVYKNLLQEIAQRVGAPLP+YTTFRSGLGH PVFT
Sbjct: 61  AEVALNALSNRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPRYTTFRSGLGHQPVFT 120

Query: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSSLKQLAKESASSSSEPENNDELEQITIAR 180
           G VELAGITFTG+PAKNKKQAEKNAAMAAWSSLKQLAKE++SS  EPEN DELEQ+ IAR
Sbjct: 121 GTVELAGITFTGDPAKNKKQAEKNAAMAAWSSLKQLAKETSSSMPEPENIDELEQVIIAR 180

Query: 181 ALLNYRQKEKMAM-SNPNATIPFHKKLQIQTPRPTSPQRPPAPTSKILPLICQKAAPRSR 240
           AL+NYR KE +   S+ +A +PF KK  +Q  RPTSPQ  PA TS+ILP IC K   RS 
Sbjct: 181 ALINYRIKENIGTGSSSSAPVPFAKKFFMQNLRPTSPQPSPATTSRILPFICPKQPSRSS 240

Query: 241 APFSANKIPIPQSQTPALEA-SGTRPQKFSAGAALSYIPVHQFRTSCHGIAPPVTIRTAM 300
               A    I +    ALE+ S  RPQ+  A     Y+P+ QFR+ CHG+APPVTIRTA+
Sbjct: 241 RSSLAATSGIDRIMAAALESRSYQRPQQRFANP--PYVPMRQFRSQCHGMAPPVTIRTAV 300

Query: 301 PVYSAPPLPQP-----SKLP-----PQQVIRVPPVRIAPPVSIRQAIPVFA-APPVR 345
           PV+SAPP+P P     ++LP     P  +   PPVRIAPPV+IR A+PVFA APPVR
Sbjct: 301 PVFSAPPMPPPPCTNNTQLPSSVYVPSLMRTAPPVRIAPPVTIRTAVPVFASAPPVR 355

[Close]

BLAST of HG10018196 vs. ExPASy Swiss-Prot
Match: Q9AV50 (Double-stranded RNA-binding protein 6 OS=Oryza sativa subsp. japonica OX=39947 GN=DRB6 PE=2 SV=1)

HSP 1 Score: 386.7 bits (992), Expect = 3.4e-106
Identity = 244/418 (58.37%), Postives = 284/418 (67.94%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60
           MYKNQLQELAQRSCFNLP+YTC+REGPDHAPRFKA VNFNGE FE P + +TLRQAEH+A
Sbjct: 1   MYKNQLQELAQRSCFNLPAYTCLREGPDHAPRFKAAVNFNGEQFESPGFFTTLRQAEHAA 60

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120
           AEVAL AL+ RGP +SLAARILDETGVYKNLLQE+AQRVGAPLP YTT RSGLGHLPVFT
Sbjct: 61  AEVALAALARRGPSYSLAARILDETGVYKNLLQEVAQRVGAPLPSYTTERSGLGHLPVFT 120

Query: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSSLKQLAKESASSSSEPENNDELEQITIAR 180
             VELAGITFTG+PAKNKKQAEKNAA AAWSSL+QL ++ ASSS+EPE+NDE EQI IAR
Sbjct: 121 CTVELAGITFTGDPAKNKKQAEKNAASAAWSSLRQLVRQEASSSNEPESNDEQEQIRIAR 180

Query: 181 ALLNYRQKEKMAMSNPNATIPFHKKLQIQTPRPTS-PQRPPAPTSKILPLICQKAAPRSR 240
           ALLNYR KEKMAM+N     PF KK  +Q  R T+ PQ   +  SKILPL   K+  RSR
Sbjct: 181 ALLNYRLKEKMAMANNPHASPFPKKFPMQPERRTAFPQSSHSSYSKILPLFRPKSNSRSR 240

Query: 241 APFSANKIPIPQSQTPALEASGTRPQ-KFSAGAALSYIPVHQFRTSCHGIAPPVTIRTAM 300
               A       SQTP        P+ +F A  A  Y+PV  FR  CH +APPVT+RT++
Sbjct: 241 PESPA--ASDAASQTPFRPTESPNPRSRFPAAEAAPYVPVGHFRMPCHSMAPPVTVRTSI 300

Query: 301 PVYSAPPLPQP----SKLPPQQVIRVPPVRIAPPVSIRQAIPVFAAPPVRKENP--PI-- 360
           PV+SAPPLP P     +LPP  +   PP+R+A PV IR A P+F    V+   P  P+  
Sbjct: 301 PVFSAPPLPPPGARTQQLPP-LMSHPPPIRMASPVRIRPAPPLFTPSAVQGPKPMMPVQI 360

Query: 361 -------VKKEDCPA-PAAPKDDPSALSAPVPSP--PTVSLPVPSPPTVSPPVPSLPI 399
                  +K+   P  P   KD  + L     SP  P     V S P      P++P+
Sbjct: 361 KDVQHQQIKETRSPVMPVQVKDAQNQLLKGSLSPVIPVQIKDVQSQPPKEALSPAIPV 415

[Close]

BLAST of HG10018196 vs. ExPASy Swiss-Prot
Match: Q0DKP4 (Double-stranded RNA-binding protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=DRB2 PE=2 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 2.7e-71
Identity = 150/227 (66.08%), Postives = 170/227 (74.89%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60
           MYKNQLQELAQRSCFNLPSY CIREGPDHAPRFKATVNFNGE FE P +CSTLR AEH+A
Sbjct: 1   MYKNQLQELAQRSCFNLPSYACIREGPDHAPRFKATVNFNGETFESPAFCSTLRLAEHAA 60

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120
           AEVALN LS RGP  SLAA++LDETG+YKNLLQE A R G  LP YTT RSG GH PVFT
Sbjct: 61  AEVALNELSKRGPSSSLAAKVLDETGIYKNLLQETAHRAGLKLPVYTTIRSGPGHTPVFT 120

Query: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSSLKQLAK--ESASSSSEPE-NNDELEQIT 180
             VELAG+TFTG P K KKQA+KNAAMAAWS LKQL +  E +SSS  P+ ++D+ EQI 
Sbjct: 121 CTVELAGMTFTGNPGKTKKQAQKNAAMAAWSELKQLPRVGEPSSSSCPPDHDDDDQEQII 180

Query: 181 IARALLNYRQKEKMAMSNPNATIPFHKKLQIQTPRPTSPQRPPAPTS 225
           +AR L +  Q      +N   T P  K+ Q  + RP+S +RP  P S
Sbjct: 181 VARTLASLNQ------TNGGKT-PQQKEKQQSSNRPSS-RRPSYPKS 219

[Close]

BLAST of HG10018196 vs. ExPASy Swiss-Prot
Match: Q8GY79 (Double-stranded RNA-binding protein 5 OS=Arabidopsis thaliana OX=3702 GN=DRB5 PE=1 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 4.3e-69
Identity = 164/343 (47.81%), Postives = 204/343 (59.48%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60
           MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKA+VNFNGEIFE P YCSTLRQAEH+A
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKASVNFNGEIFESPTYCSTLRQAEHAA 60

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120
           AEV+LN LS+R P  SL A+ILDETG+YKNLLQE A R G  LP YT+ RSG  H P F+
Sbjct: 61  AEVSLNVLSSRVPSKSLTAKILDETGIYKNLLQETAHRAGLDLPMYTSVRSGSCHFPGFS 120

Query: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSSLKQLAKESASSSSEPENNDELEQITIAR 180
             VELAG+TFTGE AK KKQAEKNAA+AAWSSLK++       SS    ++E EQ  +AR
Sbjct: 121 CTVELAGMTFTGESAKTKKQAEKNAAIAAWSSLKKM-------SSLDSQDEEKEQEAVAR 180

Query: 181 ALLNYRQKE--------------KMAMSNPNATIPFHKKLQIQTPRPTS----------- 240
            L  ++ KE                  SN +  I   + + + T + +S           
Sbjct: 181 VLSRFKPKEVRRRETTNQWRRRTSQQDSNKDLLIERLRWINLLTNQASSSSSTSTPNQHK 240

Query: 241 --------PQRPPAPTSKILPLICQKAAPRSRAPFSANKIPIPQSQTPALEASGTRPQKF 300
                   P  PP  +SKILP I Q     S+   +     +  S+    E S    ++ 
Sbjct: 241 NSSFISLIPPPPPPKSSKILPFIQQYKDRSSQEAKTETATEMINSKAKVNETSTRLSKQM 300

Query: 301 SAGAALSYIPVHQFRTSCHGIAPPVTIRTAMPVYSAPPLPQPS 311
                  Y  V     + + +AP V +R+ +PV++APP P+P+
Sbjct: 301 PFSDMNRYNFVGGCSVNPYSLAPAVQMRSVIPVFAAPP-PKPN 335

[Close]

BLAST of HG10018196 vs. ExPASy Swiss-Prot
Match: Q9LJF5 (Double-stranded RNA-binding protein 3 OS=Arabidopsis thaliana OX=3702 GN=DRB3 PE=1 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 6.8e-67
Identity = 167/350 (47.71%), Postives = 212/350 (60.57%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60
           MYKNQLQELAQRSCF+LPSYTC REGPDHAPRFKA+VNFNGEIFE P YCSTLRQAEHSA
Sbjct: 1   MYKNQLQELAQRSCFSLPSYTCTREGPDHAPRFKASVNFNGEIFESPTYCSTLRQAEHSA 60

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120
           AEVAL+ALS++GP  SL AR+LDETG+YKNLLQE A R G  LP YT+ RSG GH+P F+
Sbjct: 61  AEVALSALSSKGPSKSLTARVLDETGIYKNLLQETAHRAGLDLPVYTSVRSGPGHIPTFS 120

Query: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSSLKQLAKESASSSSEPENNDELEQITIAR 180
             VELAG++F GE AK KKQAEKNAA+AAW SL+++ +       +P   +E EQ  +AR
Sbjct: 121 CTVELAGMSFNGESAKTKKQAEKNAAIAAWFSLRKMPR------LDPLRGEEKEQEIVAR 180

Query: 181 ALLNYRQKEKMAMSNPNATIPFHKKLQIQTPRPTSPQRPPAPTSKILPLICQKAAPRSRA 240
            L  +R KE +    PN +    ++  I+T R    Q     T+    L+C+K    +  
Sbjct: 181 VLSRFRPKE-VKRREPNQS---RRRTVIRTIR----QNTTTTTTTTGDLLCEKLRSINLY 240

Query: 241 PFSANKIPIPQSQTPALEASGTRPQKFSAGAALSYIPVHQFRTSCHGIAPPVTIRTA--M 300
              A+    P  +      + T+ Q              + + S     P + I+T+   
Sbjct: 241 TNEASSSSPPPQRFWPSRTNLTQEQSKVKSLLEKCQEYAEKKQSLDDPKPEMRIKTSSPS 300

Query: 301 PVYSAPPLPQPSKLPPQQVIRVPPVRIAPPVSIRQAIPVFAAPPVRKENP 349
           P+ S+      SKL P     +   ++AP V IR  IPV +APP  K NP
Sbjct: 301 PLSSSVERNCYSKLLPFPSFVLNHQKLAPAVHIRSVIPVCSAPP-PKPNP 335

[Close]

BLAST of HG10018196 vs. ExPASy TrEMBL
Match: A0A0A0LSF2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G132060 PE=4 SV=1)

HSP 1 Score: 744.2 bits (1920), Expect = 3.1e-211
Identity = 393/429 (91.61%), Postives = 405/429 (94.41%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60
           MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120
           AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT
Sbjct: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120

Query: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSSLKQLAKESASSSSEPENNDELEQITIAR 180
           GIVELAGITFTGEPAKNKKQAEKNAAMAAWS+LKQLAKESASSSSEPENNDELEQITIAR
Sbjct: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKESASSSSEPENNDELEQITIAR 180

Query: 181 ALLNYRQKEKMAMSNPNATIPFHKKLQIQTPRPTSPQRPPAPTSKILPLICQKAAPRSRA 240
           ALLNYRQKEK+AMSNPNATIPFHKKLQIQTPRPTSPQRPPAPTSKILPLICQKAAPRSRA
Sbjct: 181 ALLNYRQKEKLAMSNPNATIPFHKKLQIQTPRPTSPQRPPAPTSKILPLICQKAAPRSRA 240

Query: 241 PFSANKIPIPQSQTPALEASGTRPQKFSAGAALSYIPVHQFRTSCHGIAPPVTIRTAMPV 300
           PFSANKIPIPQSQTPALE SG RPQKFSAG ALSYIPV QFRTSCHGIAPPVTIRTAMPV
Sbjct: 241 PFSANKIPIPQSQTPALEGSGPRPQKFSAGTALSYIPVQQFRTSCHGIAPPVTIRTAMPV 300

Query: 301 YSAPPLPQPSKLPPQQVIRVPPVRIAPPVSIRQAIPVFAAPPVRKENPPIVKKEDCPAPA 360
           +SAPPLPQPSKLPPQQVIRVPP+RIAPPVSIRQAIPVFAAPPVRKENPP+VKKE+CPAPA
Sbjct: 301 FSAPPLPQPSKLPPQQVIRVPPIRIAPPVSIRQAIPVFAAPPVRKENPPVVKKEECPAPA 360

Query: 361 APKDDPSALSAPVPSPPTVSLPVPSPPTVSPPVPSLPIVSPAEVEQATSTVVNSQQETKT 420
           APK+DP ALSAP      V++ VPSPPTV         VS AEVEQAT TVVNS +ETKT
Sbjct: 361 APKEDPPALSAP------VTVTVPSPPTV---------VSTAEVEQATFTVVNSPEETKT 414

Query: 421 IENLKELKI 430
           +ENL+ELKI
Sbjct: 421 LENLEELKI 414

[Close]

BLAST of HG10018196 vs. ExPASy TrEMBL
Match: A0A5A7TEV1 (Double-stranded RNA-binding protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold67G00360 PE=4 SV=1)

HSP 1 Score: 738.4 bits (1905), Expect = 1.7e-209
Identity = 391/429 (91.14%), Postives = 401/429 (93.47%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60
           MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120
           AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT
Sbjct: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120

Query: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSSLKQLAKESASSSSEPENNDELEQITIAR 180
           GIVELAGITFTGEPAKNKKQAEKNAAMAAWS+LKQLAKESASSSSEPENNDELEQITIAR
Sbjct: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKESASSSSEPENNDELEQITIAR 180

Query: 181 ALLNYRQKEKMAMSNPNATIPFHKKLQIQTPRPTSPQRPPAPTSKILPLICQKAAPRSRA 240
           ALLNYRQKEK+AMSNPNATIPFHKKLQIQTPRPTSPQRPPAPTSKILPLICQKAAPRSRA
Sbjct: 181 ALLNYRQKEKLAMSNPNATIPFHKKLQIQTPRPTSPQRPPAPTSKILPLICQKAAPRSRA 240

Query: 241 PFSANKIPIPQSQTPALEASGTRPQKFSAGAALSYIPVHQFRTSCHGIAPPVTIRTAMPV 300
           PFSANKIPI QSQTP LE SG RPQKFSAG ALSYIPV QFRTSCHGIAPPVTIRTAMPV
Sbjct: 241 PFSANKIPISQSQTPVLEGSGPRPQKFSAGTALSYIPVQQFRTSCHGIAPPVTIRTAMPV 300

Query: 301 YSAPPLPQPSKLPPQQVIRVPPVRIAPPVSIRQAIPVFAAPPVRKENPPIVKKEDCPAPA 360
           +SAPPLPQPSKLPPQQVIRVPP+RIAPPVSIRQAIPVFAAPPVRKENPP+VKKE+CPAPA
Sbjct: 301 FSAPPLPQPSKLPPQQVIRVPPIRIAPPVSIRQAIPVFAAPPVRKENPPVVKKEECPAPA 360

Query: 361 APKDDPSALSAPVPSPPTVSLPVPSPPTVSPPVPSLPIVSPAEVEQATSTVVNSQQETKT 420
           APK+DP ALSAPV         VPSPPTV         VS AEVEQAT TVVNS +ETKT
Sbjct: 361 APKEDPPALSAPV--------TVPSPPTV---------VSTAEVEQATFTVVNSPEETKT 412

Query: 421 IENLKELKI 430
           +ENL+ELKI
Sbjct: 421 LENLEELKI 412

[Close]

BLAST of HG10018196 vs. ExPASy TrEMBL
Match: A0A1S3CHR7 (double-stranded RNA-binding protein 2 OS=Cucumis melo OX=3656 GN=LOC103500895 PE=4 SV=1)

HSP 1 Score: 738.4 bits (1905), Expect = 1.7e-209
Identity = 391/429 (91.14%), Postives = 401/429 (93.47%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60
           MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120
           AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT
Sbjct: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120

Query: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSSLKQLAKESASSSSEPENNDELEQITIAR 180
           GIVELAGITFTGEPAKNKKQAEKNAAMAAWS+LKQLAKESASSSSEPENNDELEQITIAR
Sbjct: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKESASSSSEPENNDELEQITIAR 180

Query: 181 ALLNYRQKEKMAMSNPNATIPFHKKLQIQTPRPTSPQRPPAPTSKILPLICQKAAPRSRA 240
           ALLNYRQKEK+AMSNPNATIPFHKKLQIQTPRPTSPQRPPAPTSKILPLICQKAAPRSRA
Sbjct: 181 ALLNYRQKEKLAMSNPNATIPFHKKLQIQTPRPTSPQRPPAPTSKILPLICQKAAPRSRA 240

Query: 241 PFSANKIPIPQSQTPALEASGTRPQKFSAGAALSYIPVHQFRTSCHGIAPPVTIRTAMPV 300
           PFSANKIPI QSQTP LE SG RPQKFSAG ALSYIPV QFRTSCHGIAPPVTIRTAMPV
Sbjct: 241 PFSANKIPISQSQTPVLEGSGPRPQKFSAGTALSYIPVQQFRTSCHGIAPPVTIRTAMPV 300

Query: 301 YSAPPLPQPSKLPPQQVIRVPPVRIAPPVSIRQAIPVFAAPPVRKENPPIVKKEDCPAPA 360
           +SAPPLPQPSKLPPQQVIRVPP+RIAPPVSIRQAIPVFAAPPVRKENPP+VKKE+CPAPA
Sbjct: 301 FSAPPLPQPSKLPPQQVIRVPPIRIAPPVSIRQAIPVFAAPPVRKENPPVVKKEECPAPA 360

Query: 361 APKDDPSALSAPVPSPPTVSLPVPSPPTVSPPVPSLPIVSPAEVEQATSTVVNSQQETKT 420
           APK+DP ALSAPV         VPSPPTV         VS AEVEQAT TVVNS +ETKT
Sbjct: 361 APKEDPPALSAPV--------TVPSPPTV---------VSTAEVEQATFTVVNSPEETKT 412

Query: 421 IENLKELKI 430
           +ENL+ELKI
Sbjct: 421 LENLEELKI 412

[Close]

BLAST of HG10018196 vs. ExPASy TrEMBL
Match: A0A6J1DHJ7 (double-stranded RNA-binding protein 2-like OS=Momordica charantia OX=3673 GN=LOC111020530 PE=4 SV=1)

HSP 1 Score: 714.1 bits (1842), Expect = 3.4e-202
Identity = 382/429 (89.04%), Postives = 394/429 (91.84%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60
           MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120
           AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT
Sbjct: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120

Query: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSSLKQLAKESASSSSEPENNDELEQITIAR 180
           GIVELAGITFTGEPAKNKKQAEKNAAMAAWS+LKQLAKESASSSSEPENNDELEQITIAR
Sbjct: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKESASSSSEPENNDELEQITIAR 180

Query: 181 ALLNYRQKEKMAMSNPNATIPFHKKLQIQTPRPTSPQRPPAPTSKILPLICQKAAPRSRA 240
           ALLNYRQKEKMAMSNPNATIPF KKLQIQ+PRPTSPQRPPAPTSKILPLICQKAAPRSRA
Sbjct: 181 ALLNYRQKEKMAMSNPNATIPFPKKLQIQSPRPTSPQRPPAPTSKILPLICQKAAPRSRA 240

Query: 241 PFSANKIPIPQSQTPALEASGTRPQKFSAGAALSYIPVHQFRTSCHGIAPPVTIRTAMPV 300
           PFS NKI IPQSQTPALE SGTRPQKFSAGAALSYIPV QFRTSCHGIAPPVTIRT MPV
Sbjct: 241 PFSTNKISIPQSQTPALEGSGTRPQKFSAGAALSYIPVPQFRTSCHGIAPPVTIRTTMPV 300

Query: 301 YSAPPLPQPSKLPPQQVIRVPPVRIAPPVSIRQAIPVFAAPPVRKENPPIVKKEDCPAPA 360
           YSAPPLPQPSKLPPQQVIRVPPVRIAPPVSIRQA+PVFAAPPVRKENPP+V+KED   PA
Sbjct: 301 YSAPPLPQPSKLPPQQVIRVPPVRIAPPVSIRQAVPVFAAPPVRKENPPVVRKED--FPA 360

Query: 361 APKDDPSALSAPVPSPPTVSLPVPSPPTVSPPVPSLPIVSPAEVEQATSTVVNSQQETKT 420
           APK+DP     PV       +P PSPPT           SPAEVEQAT+ V NSQQE+KT
Sbjct: 361 APKEDP-----PV-------IPAPSPPT----------TSPAEVEQATTAVANSQQESKT 405

Query: 421 IENLKELKI 430
           +ENL++LKI
Sbjct: 421 LENLEQLKI 405

[Close]

BLAST of HG10018196 vs. ExPASy TrEMBL
Match: A0A6J1I2I8 (double-stranded RNA-binding protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111469315 PE=4 SV=1)

HSP 1 Score: 707.2 bits (1824), Expect = 4.1e-200
Identity = 382/431 (88.63%), Postives = 394/431 (91.42%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60
           MYKNQLQELAQRSCFNLPSY CIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYACIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120
           AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT
Sbjct: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120

Query: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSSLKQLAKESASSSSEPENNDELEQITIAR 180
           GIVELAGITFTGEPAKNKKQAEKNAAMAAWSSLKQLAKESASSSSEPENNDELEQITIAR
Sbjct: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSSLKQLAKESASSSSEPENNDELEQITIAR 180

Query: 181 ALLNYRQKEKMAMSNPNATIPFHKKLQIQTPRPTSPQRPPAPTSKILPLICQKAAPRSRA 240
           ALLNYRQKEKMAMSNPNATIPF KKLQIQ+PRPTSPQRPPAPTSKILPLICQKAAPRSRA
Sbjct: 181 ALLNYRQKEKMAMSNPNATIPFPKKLQIQSPRPTSPQRPPAPTSKILPLICQKAAPRSRA 240

Query: 241 PFSANKIPIPQSQTPALEASGT-RPQKFSAG-AALSYIPVHQFRTSCHGIAPPVTIRTAM 300
           PFSANKIPIP +QT ALE S T RPQKFSAG AALSYIPVHQ+RTSCHGIAPPVTIRT M
Sbjct: 241 PFSANKIPIPHAQTSALEGSATPRPQKFSAGAAALSYIPVHQYRTSCHGIAPPVTIRTTM 300

Query: 301 PVYSAPPLPQPSKLPPQQVIRVPPVRIAPPVSIRQAIPVFAAPPVRKENPPIVKKEDCPA 360
           PVYSAPPLPQP KLPPQQVIRVPPVRIAPPVSIRQAIPVFAAPPVRKEN P VKKEDCPA
Sbjct: 301 PVYSAPPLPQPLKLPPQQVIRVPPVRIAPPVSIRQAIPVFAAPPVRKENAPAVKKEDCPA 360

Query: 361 PAAPKDDPSALSAPVPSPPTVSLPVPSPPTVSPPVPSLPIVSPAEVEQATSTVVNSQQET 420
           P APK++   L+AP         PVP+PPT           SPAEVEQ T+T+VNS+QET
Sbjct: 361 PTAPKEN---LAAPA--------PVPTPPT----------ESPAEVEQDTTTLVNSRQET 410

Query: 421 KTIENLKELKI 430
           KT+ENL+ELKI
Sbjct: 421 KTLENLEELKI 410

[Close]

BLAST of HG10018196 vs. TAIR 10
Match: AT2G28380.1 (dsRNA-binding protein 2 )

HSP 1 Score: 462.2 bits (1188), Expect = 4.5e-130
Identity = 258/357 (72.27%), Postives = 285/357 (79.83%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60
           MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFE PQYCSTLRQAEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPQYCSTLRQAEHSA 60

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120
           AEVALNALSNRGP HSLAARILDETGVYKNLLQEIAQRVGAPLP+YTTFRSGLGH PVFT
Sbjct: 61  AEVALNALSNRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPRYTTFRSGLGHQPVFT 120

Query: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSSLKQLAKESASSSSEPENNDELEQITIAR 180
           G VELAGITFTG+PAKNKKQAEKNAAMAAWSSLKQLAKE++SS  EPEN DELEQ+ IAR
Sbjct: 121 GTVELAGITFTGDPAKNKKQAEKNAAMAAWSSLKQLAKETSSSMPEPENIDELEQVIIAR 180

Query: 181 ALLNYRQKEKMAM-SNPNATIPFHKKLQIQTPRPTSPQRPPAPTSKILPLICQKAAPRSR 240
           AL+NYR KE +   S+ +A +PF KK  +Q  RPTSPQ  PA TS+ILP IC K   RS 
Sbjct: 181 ALINYRIKENIGTGSSSSAPVPFAKKFFMQNLRPTSPQPSPATTSRILPFICPKQPSRSS 240

Query: 241 APFSANKIPIPQSQTPALEA-SGTRPQKFSAGAALSYIPVHQFRTSCHGIAPPVTIRTAM 300
               A    I +    ALE+ S  RPQ+  A     Y+P+ QFR+ CHG+APPVTIRTA+
Sbjct: 241 RSSLAATSGIDRIMAAALESRSYQRPQQRFANP--PYVPMRQFRSQCHGMAPPVTIRTAV 300

Query: 301 PVYSAPPLPQP-----SKLP-----PQQVIRVPPVRIAPPVSIRQAIPVFA-APPVR 345
           PV+SAPP+P P     ++LP     P  +   PPVRIAPPV+IR A+PVFA APPVR
Sbjct: 301 PVFSAPPMPPPPCTNNTQLPSSVYVPSLMRTAPPVRIAPPVTIRTAVPVFASAPPVR 355

[Close]

BLAST of HG10018196 vs. TAIR 10
Match: AT5G41070.1 (dsRNA-binding protein 5 )

HSP 1 Score: 263.5 bits (672), Expect = 3.0e-70
Identity = 164/343 (47.81%), Postives = 204/343 (59.48%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60
           MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKA+VNFNGEIFE P YCSTLRQAEH+A
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKASVNFNGEIFESPTYCSTLRQAEHAA 60

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120
           AEV+LN LS+R P  SL A+ILDETG+YKNLLQE A R G  LP YT+ RSG  H P F+
Sbjct: 61  AEVSLNVLSSRVPSKSLTAKILDETGIYKNLLQETAHRAGLDLPMYTSVRSGSCHFPGFS 120

Query: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSSLKQLAKESASSSSEPENNDELEQITIAR 180
             VELAG+TFTGE AK KKQAEKNAA+AAWSSLK++       SS    ++E EQ  +AR
Sbjct: 121 CTVELAGMTFTGESAKTKKQAEKNAAIAAWSSLKKM-------SSLDSQDEEKEQEAVAR 180

Query: 181 ALLNYRQKE--------------KMAMSNPNATIPFHKKLQIQTPRPTS----------- 240
            L  ++ KE                  SN +  I   + + + T + +S           
Sbjct: 181 VLSRFKPKEVRRRETTNQWRRRTSQQDSNKDLLIERLRWINLLTNQASSSSSTSTPNQHK 240

Query: 241 --------PQRPPAPTSKILPLICQKAAPRSRAPFSANKIPIPQSQTPALEASGTRPQKF 300
                   P  PP  +SKILP I Q     S+   +     +  S+    E S    ++ 
Sbjct: 241 NSSFISLIPPPPPPKSSKILPFIQQYKDRSSQEAKTETATEMINSKAKVNETSTRLSKQM 300

Query: 301 SAGAALSYIPVHQFRTSCHGIAPPVTIRTAMPVYSAPPLPQPS 311
                  Y  V     + + +AP V +R+ +PV++APP P+P+
Sbjct: 301 PFSDMNRYNFVGGCSVNPYSLAPAVQMRSVIPVFAAPP-PKPN 335

[Close]

BLAST of HG10018196 vs. TAIR 10
Match: AT3G26932.1 (dsRNA-binding protein 3 )

HSP 1 Score: 256.1 bits (653), Expect = 4.9e-68
Identity = 167/350 (47.71%), Postives = 212/350 (60.57%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60
           MYKNQLQELAQRSCF+LPSYTC REGPDHAPRFKA+VNFNGEIFE P YCSTLRQAEHSA
Sbjct: 1   MYKNQLQELAQRSCFSLPSYTCTREGPDHAPRFKASVNFNGEIFESPTYCSTLRQAEHSA 60

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120
           AEVAL+ALS++GP  SL AR+LDETG+YKNLLQE A R G  LP YT+ RSG GH+P F+
Sbjct: 61  AEVALSALSSKGPSKSLTARVLDETGIYKNLLQETAHRAGLDLPVYTSVRSGPGHIPTFS 120

Query: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSSLKQLAKESASSSSEPENNDELEQITIAR 180
             VELAG++F GE AK KKQAEKNAA+AAW SL+++ +       +P   +E EQ  +AR
Sbjct: 121 CTVELAGMSFNGESAKTKKQAEKNAAIAAWFSLRKMPR------LDPLRGEEKEQEIVAR 180

Query: 181 ALLNYRQKEKMAMSNPNATIPFHKKLQIQTPRPTSPQRPPAPTSKILPLICQKAAPRSRA 240
            L  +R KE +    PN +    ++  I+T R    Q     T+    L+C+K    +  
Sbjct: 181 VLSRFRPKE-VKRREPNQS---RRRTVIRTIR----QNTTTTTTTTGDLLCEKLRSINLY 240

Query: 241 PFSANKIPIPQSQTPALEASGTRPQKFSAGAALSYIPVHQFRTSCHGIAPPVTIRTA--M 300
              A+    P  +      + T+ Q              + + S     P + I+T+   
Sbjct: 241 TNEASSSSPPPQRFWPSRTNLTQEQSKVKSLLEKCQEYAEKKQSLDDPKPEMRIKTSSPS 300

Query: 301 PVYSAPPLPQPSKLPPQQVIRVPPVRIAPPVSIRQAIPVFAAPPVRKENP 349
           P+ S+      SKL P     +   ++AP V IR  IPV +APP  K NP
Sbjct: 301 PLSSSVERNCYSKLLPFPSFVLNHQKLAPAVHIRSVIPVCSAPP-PKPNP 335

[Close]

BLAST of HG10018196 vs. TAIR 10
Match: AT3G26932.2 (dsRNA-binding protein 3 )

HSP 1 Score: 256.1 bits (653), Expect = 4.9e-68
Identity = 167/350 (47.71%), Postives = 212/350 (60.57%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60
           MYKNQLQELAQRSCF+LPSYTC REGPDHAPRFKA+VNFNGEIFE P YCSTLRQAEHSA
Sbjct: 1   MYKNQLQELAQRSCFSLPSYTCTREGPDHAPRFKASVNFNGEIFESPTYCSTLRQAEHSA 60

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120
           AEVAL+ALS++GP  SL AR+LDETG+YKNLLQE A R G  LP YT+ RSG GH+P F+
Sbjct: 61  AEVALSALSSKGPSKSLTARVLDETGIYKNLLQETAHRAGLDLPVYTSVRSGPGHIPTFS 120

Query: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSSLKQLAKESASSSSEPENNDELEQITIAR 180
             VELAG++F GE AK KKQAEKNAA+AAW SL+++ +       +P   +E EQ  +AR
Sbjct: 121 CTVELAGMSFNGESAKTKKQAEKNAAIAAWFSLRKMPR------LDPLRGEEKEQEIVAR 180

Query: 181 ALLNYRQKEKMAMSNPNATIPFHKKLQIQTPRPTSPQRPPAPTSKILPLICQKAAPRSRA 240
            L  +R KE +    PN +    ++  I+T R    Q     T+    L+C+K    +  
Sbjct: 181 VLSRFRPKE-VKRREPNQS---RRRTVIRTIR----QNTTTTTTTTGDLLCEKLRSINLY 240

Query: 241 PFSANKIPIPQSQTPALEASGTRPQKFSAGAALSYIPVHQFRTSCHGIAPPVTIRTA--M 300
              A+    P  +      + T+ Q              + + S     P + I+T+   
Sbjct: 241 TNEASSSSPPPQRFWPSRTNLTQEQSKVKSLLEKCQEYAEKKQSLDDPKPEMRIKTSSPS 300

Query: 301 PVYSAPPLPQPSKLPPQQVIRVPPVRIAPPVSIRQAIPVFAAPPVRKENP 349
           P+ S+      SKL P     +   ++AP V IR  IPV +APP  K NP
Sbjct: 301 PLSSSVERNCYSKLLPFPSFVLNHQKLAPAVHIRSVIPVCSAPP-PKPNP 335

[Close]

BLAST of HG10018196 vs. TAIR 10
Match: AT3G62800.1 (double-stranded-RNA-binding protein 4 )

HSP 1 Score: 127.1 bits (318), Expect = 3.4e-29
Identity = 74/172 (43.02%), Postives = 96/172 (55.81%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60
           +YK QLQ  A +    LP Y   REGP HAPRF+  V F G+ F+  ++  TL+ AEH+A
Sbjct: 4   VYKGQLQAYALQHNLELPVYANEREGPPHAPRFRCNVTFCGQTFQSSEFFPTLKSAEHAA 63

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120
           A++A+ +L+ + P     A        YKNLLQEIAQ+  + LP Y T  SG  H P FT
Sbjct: 64  AKIAVASLTPQSPEGIDVA--------YKNLLQEIAQKESSLLPFYATATSGPSHAPTFT 123

Query: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSSLKQLAKESASSSSEPENNDE 173
             VE AG  F+GE AK KK AE +AA  A+ S+K        S + P    E
Sbjct: 124 STVEFAGKVFSGEEAKTKKLAEMSAAKVAFMSIKNGNSNQTGSPTLPSERQE 167

The following BLAST results are available for this feature:

BLAST of HG10018196 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038894734.1	2.1e-222	95.57	double-stranded RNA-binding protein 2 [Benincasa hispida]	[more]
XP_004139447.1	6.3e-211	91.61	double-stranded RNA-binding protein 2 [Cucumis sativus] >KGN64845.1 hypothetical...	[more]
XP_008462570.1	3.5e-209	91.14	PREDICTED: double-stranded RNA-binding protein 2 [Cucumis melo] >KAA0041703.1 do...	[more]
XP_022152917.1	7.0e-202	89.04	double-stranded RNA-binding protein 2-like [Momordica charantia]	[more]
KAG6583583.1	1.6e-201	89.33	Double-stranded RNA-binding protein 2, partial [Cucurbita argyrosperma subsp. so...	[more]

BLAST of HG10018196 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SKN2	6.3e-129	72.27	Double-stranded RNA-binding protein 2 OS=Arabidopsis thaliana OX=3702 GN=DRB2 PE...	[more]
Q9AV50	3.4e-106	58.37	Double-stranded RNA-binding protein 6 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
Q0DKP4	2.7e-71	66.08	Double-stranded RNA-binding protein 2 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
Q8GY79	4.3e-69	47.81	Double-stranded RNA-binding protein 5 OS=Arabidopsis thaliana OX=3702 GN=DRB5 PE...	[more]
Q9LJF5	6.8e-67	47.71	Double-stranded RNA-binding protein 3 OS=Arabidopsis thaliana OX=3702 GN=DRB3 PE...	[more]

BLAST of HG10018196 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LSF2	3.1e-211	91.61	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G132060 PE=4 SV=1	[more]
A0A5A7TEV1	1.7e-209	91.14	Double-stranded RNA-binding protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A1S3CHR7	1.7e-209	91.14	double-stranded RNA-binding protein 2 OS=Cucumis melo OX=3656 GN=LOC103500895 PE...	[more]
A0A6J1DHJ7	3.4e-202	89.04	double-stranded RNA-binding protein 2-like OS=Momordica charantia OX=3673 GN=LOC...	[more]
A0A6J1I2I8	4.1e-200	88.63	double-stranded RNA-binding protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]

BLAST of HG10018196 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G28380.1	4.5e-130	72.27	dsRNA-binding protein 2	[more]
AT5G41070.1	3.0e-70	47.81	dsRNA-binding protein 5	[more]
AT3G26932.1	4.9e-68	47.71	dsRNA-binding protein 3	[more]
AT3G26932.2	4.9e-68	47.71	dsRNA-binding protein 3	[more]
AT3G62800.1	3.4e-29	43.02	double-stranded-RNA-binding protein 4	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014720	Double-stranded RNA-binding domain	SMART	SM00358	DRBM_3	coord: 88..154 e-value: 1.9E-19 score: 80.6 coord: 2..69 e-value: 1.5E-20 score: 84.3
IPR014720	Double-stranded RNA-binding domain	PFAM	PF00035	dsrm	coord: 2..68 e-value: 7.2E-16 score: 58.7 coord: 88..153 e-value: 1.4E-11 score: 45.0
IPR014720	Double-stranded RNA-binding domain	PROSITE	PS50137	DS_RBD	coord: 87..155 score: 10.945776
IPR014720	Double-stranded RNA-binding domain	PROSITE	PS50137	DS_RBD	coord: 1..70 score: 11.892551
None	No IPR available	GENE3D	3.30.160.20		coord: 1..68 e-value: 9.3E-23 score: 82.3
None	No IPR available	GENE3D	3.30.160.20		coord: 81..155 e-value: 2.1E-20 score: 74.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 344..397
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 369..397
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 409..429
None	No IPR available	PANTHER	PTHR46031	FAMILY NOT NAMED	coord: 1..347
None	No IPR available	PANTHER	PTHR46031:SF7	DOUBLE-STRANDED RNA-BINDING PROTEIN 2-LIKE	coord: 1..347
None	No IPR available	SUPERFAMILY	54768	dsRNA-binding domain-like	coord: 2..69
None	No IPR available	SUPERFAMILY	54768	dsRNA-binding domain-like	coord: 88..159
IPR044451	AtDRB-like, second double-stranded RNA binding domain, plant	CDD	cd19908	DSRM_AtDRB-like_rpt2	coord: 86..154 e-value: 4.04511E-38 score: 130.677
IPR044450	AtDRB-like, first double-stranded RNA binding domain, plant	CDD	cd19907	DSRM_AtDRB-like_rpt1	coord: 1..69 e-value: 2.65581E-42 score: 141.844

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10018196.1	HG10018196.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0035196	production of miRNAs involved in gene silencing by miRNA
biological_process	GO:0070919	production of siRNA involved in gene silencing by small RNA
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0003725	double-stranded RNA binding