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HG10018176 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCAGTAATTCCAAGATGGCTTGAATCTTTACTCTCAACAACATTTTTCTATGCTTGTCCTTTACATAAAGAAGCTCCAAGAAGTGAATGCAATATGTTTTGCCTTGATTGTTGTCATCCCTCTTTTTGCTTCTACTGCCGATCCAACAAACACCATGATCATCATGTCATTCAGGTTTCTTCTTCTTCTTCTCCTTTCTTTCGTTTCTATTCGTTTCTTCGTCGGAATCAAAATCCAACATTTAGAAAGAAATAAAGAAGGTGTGGTGCTCTCTCTAATCTTTCATTTTGTATAGTTTTACCAATGTGGAGAAATTTTGATTTCAAATTAAGATATTCATTGATACGTTGATATATATCTGTAAATCGGAGAAATACCCAAAAAAACATAAAGAAATGTCATCTATTGATCTCAATATGGAAACATCTACTAATACCAAGACCTATAACTTGGTTTGGAAGTTAGTAAGAATAACTTAATTAAAAAATAAATAAAAATTAATTTTAGATATACCTATAAAATTGAAACTTCAATATCGTAACAACGGGTTAAATTAAAAATAAAAAATTAAAAGAACATATTTTTTGAATTTACACACAGATTCGAAGGTCTTCGTACCACGACGTGGTGAGAGTGGCGGAGATAGAGAAAGTTTTGGATATAAGTGAAGTTCAAACATACGTGATTAACAGTGCAAGAGTTTTGTTTCTAAACGAAAGGCCTCAACCAAAGAACTCTACTAGTAAAGGAGGCTCTCATGTGTGTGAGATTTGTAGTAGAAGTCTCTTGGATCCCTTTCGTTTTTGCTCTCTTGGTTGCAAGGTAATTAAATTTCTAGCTAATAATTCTTTTCTCTTCATTTCTCTAAACATTATTCTTTTTTTAAATCAATTTTTTACGAGCTTCTTGATTAATTGAGTTAGGCTCCAATTAATAAAACTTTAGCATATTTCTAGGTTATTTAATGTTCTTACTATTGTCTCTAAATTATTAAATTATGATGTTAAAAATTATTCATAAGGTAGATGTGAGTAGGTAGTTCAAGTGCCCCCCCCCCCCCCCCCCCTTTGTTTTGCAATGTGGCTTTAATTATATATATATATATTTTTCTTCTAGAAGAAAGTTGTGTAATTATAATAATTTGGCATTCTCTCAATTGGGAAGTGTGTGTAGTAGTTTATTTTATAAATATTTTGGGTTATTTTTCCTCGATTTTGTAAAAGTTTTAATTTTATTTTTTATGTATTATATTAATTAAGTTTTCTAATCAAGTTTTTACAATGTAAAAAAAAATTGTTAACATTATAGTTTCTTAATTAAGTTGAAAATACTCTCATTTTTATATATTTTAATTTTAATTTTGATGAAATAGACATGTCTACCCATGAAATCGAAATTTACCTACTTTTATTTATGTGACCTAATATTAGAGGTGTAAAGTGTAACTTACCCAACCCACAAATGCCTTCTATATATTATGAAAACAATACTCATTTGAAAAATGCTATTCTACGTACTAAATTAACAATATTTTTTTTCATTAAAAAAAATTATTTTCAAATATAGCAAAATGAGTCAAAATATTTACAATATAGCAAATATCATTGTCTATCAATATCTATCACTCAATAACATTTTACTATATTTAAAAATATTTCCAGCAATTTTGTCATTTGAAATAATTACCCTTAAAAAAATCCTTTTTAAACTTACCCTTATTTTCTTTTAATATGTAGCAATAACGCTGAAACGATAACTGAAAATAAAATATCACTACATACAAAAGGAGTAAATTCAAAACTTTATAAAATTAATGATATGAAAATGAAAAATAATACAAATATTAGTTTAACTAAATTTGACATACGTTTCATCTTGAAAACGTTATACAATATATGCTCAAACGTAGTTTAGCTGATATCGTTATCCAGACCACGTATTCTACAATTTTCCTCTCAGCTTTTTTTTATAAGTTGAAACTTCATTTTCTTTTCTACATTCCACATTCTTAAATCAACTATACTTTCGTTGGTGAATTAGGTCATCGGAATAAAGACGAATGAGGATTCGAGCTTTTACTCGAGAGGAAAGAAGAATAATGAGGAAGTTTTGGGAAGAAGGGAAAGAATAGGAAGAAGATTGGCATTAAAGGAAGAAGAAGAGGAAGAAGAAGAGGAATTGCGTGTAGGAAGAAACCAAGAAGCTGAAATATACCAAAATCACACGCATCCTTCACATTCTAATTCAAGGAGGAGGAAAGGCATCCCTCAAAGAGCACCTTTTTAA ATGTCAGTAATTCCAAGATGGCTTGAATCTTTACTCTCAACAACATTTTTCTATGCTTGTCCTTTACATAAAGAAGCTCCAAGAAGTGAATGCAATATGTTTTGCCTTGATTGTTGTCATCCCTCTTTTTGCTTCTACTGCCGATCCAACAAACACCATGATCATCATGTCATTCAGATTCGAAGGTCTTCGTACCACGACGTGGTGAGAGTGGCGGAGATAGAGAAAGTTTTGGATATAAGTGAAGTTCAAACATACGTGATTAACAGTGCAAGAGTTTTGTTTCTAAACGAAAGGCCTCAACCAAAGAACTCTACTAGTAAAGGAGGCTCTCATGTGTGTGAGATTTGTAGTAGAAGTCTCTTGGATCCCTTTCGTTTTTGCTCTCTTGGTTGCAAGGTCATCGGAATAAAGACGAATGAGGATTCGAGCTTTTACTCGAGAGGAAAGAAGAATAATGAGGAAGTTTTGGGAAGAAGGGAAAGAATAGGAAGAAGATTGGCATTAAAGGAAGAAGAAGAGGAAGAAGAAGAGGAATTGCGTGTAGGAAGAAACCAAGAAGCTGAAATATACCAAAATCACACGCATCCTTCACATTCTAATTCAAGGAGGAGGAAAGGCATCCCTCAAAGAGCACCTTTTTAA ATGTCAGTAATTCCAAGATGGCTTGAATCTTTACTCTCAACAACATTTTTCTATGCTTGTCCTTTACATAAAGAAGCTCCAAGAAGTGAATGCAATATGTTTTGCCTTGATTGTTGTCATCCCTCTTTTTGCTTCTACTGCCGATCCAACAAACACCATGATCATCATGTCATTCAGATTCGAAGGTCTTCGTACCACGACGTGGTGAGAGTGGCGGAGATAGAGAAAGTTTTGGATATAAGTGAAGTTCAAACATACGTGATTAACAGTGCAAGAGTTTTGTTTCTAAACGAAAGGCCTCAACCAAAGAACTCTACTAGTAAAGGAGGCTCTCATGTGTGTGAGATTTGTAGTAGAAGTCTCTTGGATCCCTTTCGTTTTTGCTCTCTTGGTTGCAAGGTCATCGGAATAAAGACGAATGAGGATTCGAGCTTTTACTCGAGAGGAAAGAAGAATAATGAGGAAGTTTTGGGAAGAAGGGAAAGAATAGGAAGAAGATTGGCATTAAAGGAAGAAGAAGAGGAAGAAGAAGAGGAATTGCGTGTAGGAAGAAACCAAGAAGCTGAAATATACCAAAATCACACGCATCCTTCACATTCTAATTCAAGGAGGAGGAAAGGCATCCCTCAAAGAGCACCTTTTTAA MSVIPRWLESLLSTTFFYACPLHKEAPRSECNMFCLDCCHPSFCFYCRSNKHHDHHVIQIRRSSYHDVVRVAEIEKVLDISEVQTYVINSARVLFLNERPQPKNSTSKGGSHVCEICSRSLLDPFRFCSLGCKVIGIKTNEDSSFYSRGKKNNEEVLGRRERIGRRLALKEEEEEEEEELRVGRNQEAEIYQNHTHPSHSNSRRRKGIPQRAPF Homology
BLAST of HG10018176 vs. NCBI nr
Match: XP_038895394.1 (uncharacterized protein LOC120083632 isoform X1 [Benincasa hispida]) HSP 1 Score: 381.7 bits (979), Expect = 4.1e-102 Identity = 195/217 (89.86%), Postives = 200/217 (92.17%), Query Frame = 0
BLAST of HG10018176 vs. NCBI nr
Match: XP_004139563.1 (uncharacterized protein LOC101204359 [Cucumis sativus] >KGN64871.1 hypothetical protein Csa_022811 [Cucumis sativus]) HSP 1 Score: 355.1 bits (910), Expect = 4.1e-94 Identity = 185/218 (84.86%), Postives = 190/218 (87.16%), Query Frame = 0
BLAST of HG10018176 vs. NCBI nr
Match: XP_023538148.1 (uncharacterized protein LOC111799005 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 350.1 bits (897), Expect = 1.3e-92 Identity = 180/212 (84.91%), Postives = 188/212 (88.68%), Query Frame = 0
BLAST of HG10018176 vs. NCBI nr
Match: XP_008462300.1 (PREDICTED: uncharacterized protein LOC103500687 [Cucumis melo]) HSP 1 Score: 348.6 bits (893), Expect = 3.9e-92 Identity = 183/219 (83.56%), Postives = 191/219 (87.21%), Query Frame = 0
BLAST of HG10018176 vs. NCBI nr
Match: XP_022969532.1 (uncharacterized protein LOC111468520 [Cucurbita maxima]) HSP 1 Score: 348.2 bits (892), Expect = 5.0e-92 Identity = 180/212 (84.91%), Postives = 188/212 (88.68%), Query Frame = 0
BLAST of HG10018176 vs. ExPASy Swiss-Prot
Match: Q1G3Q4 (Protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1 OS=Arabidopsis thaliana OX=3702 GN=RITF1 PE=1 SV=1) HSP 1 Score: 130.2 bits (326), Expect = 2.8e-29 Identity = 62/130 (47.69%), Postives = 87/130 (66.92%), Query Frame = 0
BLAST of HG10018176 vs. ExPASy TrEMBL
Match: A0A0A0LY15 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G136780 PE=4 SV=1) HSP 1 Score: 355.1 bits (910), Expect = 2.0e-94 Identity = 185/218 (84.86%), Postives = 190/218 (87.16%), Query Frame = 0
BLAST of HG10018176 vs. ExPASy TrEMBL
Match: A0A1S3CGK9 (uncharacterized protein LOC103500687 OS=Cucumis melo OX=3656 GN=LOC103500687 PE=4 SV=1) HSP 1 Score: 348.6 bits (893), Expect = 1.9e-92 Identity = 183/219 (83.56%), Postives = 191/219 (87.21%), Query Frame = 0
BLAST of HG10018176 vs. ExPASy TrEMBL
Match: A0A6J1HWK1 (uncharacterized protein LOC111468520 OS=Cucurbita maxima OX=3661 GN=LOC111468520 PE=4 SV=1) HSP 1 Score: 348.2 bits (892), Expect = 2.4e-92 Identity = 180/212 (84.91%), Postives = 188/212 (88.68%), Query Frame = 0
BLAST of HG10018176 vs. ExPASy TrEMBL
Match: A0A6J1FD43 (uncharacterized protein LOC111444296 OS=Cucurbita moschata OX=3662 GN=LOC111444296 PE=4 SV=1) HSP 1 Score: 345.9 bits (886), Expect = 1.2e-91 Identity = 176/212 (83.02%), Postives = 187/212 (88.21%), Query Frame = 0
BLAST of HG10018176 vs. ExPASy TrEMBL
Match: A0A6J1DG68 (uncharacterized protein LOC111020539 OS=Momordica charantia OX=3673 GN=LOC111020539 PE=4 SV=1) HSP 1 Score: 329.3 bits (843), Expect = 1.2e-86 Identity = 171/214 (79.91%), Postives = 182/214 (85.05%), Query Frame = 0
BLAST of HG10018176 vs. TAIR 10
Match: AT2G27930.1 (PLATZ transcription factor family protein ) HSP 1 Score: 222.2 bits (565), Expect = 3.9e-58 Identity = 127/219 (57.99%), Postives = 141/219 (64.38%), Query Frame = 0
BLAST of HG10018176 vs. TAIR 10
Match: AT1G21000.1 (PLATZ transcription factor family protein ) HSP 1 Score: 173.7 bits (439), Expect = 1.6e-43 Identity = 102/234 (43.59%), Postives = 137/234 (58.55%), Query Frame = 0
BLAST of HG10018176 vs. TAIR 10
Match: AT1G21000.2 (PLATZ transcription factor family protein ) HSP 1 Score: 173.7 bits (439), Expect = 1.6e-43 Identity = 102/234 (43.59%), Postives = 137/234 (58.55%), Query Frame = 0
BLAST of HG10018176 vs. TAIR 10
Match: AT1G76590.1 (PLATZ transcription factor family protein ) HSP 1 Score: 172.9 bits (437), Expect = 2.7e-43 Identity = 103/231 (44.59%), Postives = 134/231 (58.01%), Query Frame = 0
BLAST of HG10018176 vs. TAIR 10
Match: AT1G32700.1 (PLATZ transcription factor family protein ) HSP 1 Score: 170.6 bits (431), Expect = 1.3e-42 Identity = 102/219 (46.58%), Postives = 128/219 (58.45%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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