HG10018134 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10018134
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	alpha/beta-Hydrolases superfamily protein
Location	Chr04: 694175 .. 694420 (-)
RNA-Seq Expression	HG10018134
Synteny	HG10018134

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGGTTTCTTTTGGGAAATGGGAGTTTGATCCCCTTGAATTGACCAATCCATTCACTGAGAATAAAGGGTCTGTTCATATATGGCAAGGTGGTGCAGATCGTGTCATCCCAATTGAATTTAATCGTTTTATAGCACAAAAACTTCCATGGATTCAGTATCATGAGGTTCCCAATGCTGGCCATTTAATAGTTCATGAAGCTGAAAGATTTAGAGCCATAATAAAGACACTTTTAGCTGGATAA

mRNA sequence

ATGTTGGTTTCTTTTGGGAAATGGGAGTTTGATCCCCTTGAATTGACCAATCCATTCACTGAGAATAAAGGGTCTGTTCATATATGGCAAGGTGGTGCAGATCGTGTCATCCCAATTGAATTTAATCGTTTTATAGCACAAAAACTTCCATGGATTCAGTATCATGAGGTTCCCAATGCTGGCCATTTAATAGTTCATGAAGCTGAAAGATTTAGAGCCATAATAAAGACACTTTTAGCTGGATAA

Coding sequence (CDS)

ATGTTGGTTTCTTTTGGGAAATGGGAGTTTGATCCCCTTGAATTGACCAATCCATTCACTGAGAATAAAGGGTCTGTTCATATATGGCAAGGTGGTGCAGATCGTGTCATCCCAATTGAATTTAATCGTTTTATAGCACAAAAACTTCCATGGATTCAGTATCATGAGGTTCCCAATGCTGGCCATTTAATAGTTCATGAAGCTGAAAGATTTAGAGCCATAATAAAGACACTTTTAGCTGGATAA

Protein sequence

MLVSFGKWEFDPLELTNPFTENKGSVHIWQGGADRVIPIEFNRFIAQKLPWIQYHEVPNAGHLIVHEAERFRAIIKTLLAG

Homology

[Close]

BLAST of HG10018134 vs. NCBI nr
Match: XP_038895419.1 (uncharacterized protein LOC120083658 [Benincasa hispida])

HSP 1 Score: 161.8 bits (408), Expect = 2.5e-36
Identity = 69/81 (85.19%), Postives = 77/81 (95.06%), Query Frame = 0


Query: 1   MLVSFGKWEFDPLELTNPFTENKGSVHIWQGGADRVIPIEFNRFIAQKLPWIQYHEVPNA 60
           MLV+FGKWEFDPLELTNPFTENKGSVH+WQGGADR++PIEF+ FIAQKLPWIQYHEVPNA
Sbjct: 256 MLVAFGKWEFDPLELTNPFTENKGSVHMWQGGADRLVPIEFSHFIAQKLPWIQYHEVPNA 315

Query: 61  GHLIVHEAERFRAIIKTLLAG 82
           GHL+VHE E F+AII+ LLAG
Sbjct: 316 GHLVVHETESFKAIIRALLAG 336

[Close]

BLAST of HG10018134 vs. NCBI nr
Match: XP_004139577.1 (uncharacterized protein LOC101208214 [Cucumis sativus])

HSP 1 Score: 147.9 bits (372), Expect = 3.8e-32
Identity = 65/80 (81.25%), Postives = 71/80 (88.75%), Query Frame = 0


Query: 1   MLVSFGKWEFDPLELTNPFTENKGSVHIWQGGADRVIPIEFNRFIAQKLPWIQYHEVPNA 60
           +LVSFGKWEFDP ELTNP TENK SVH+WQGGADRVIPIEF+RF+AQKLPWI YHEVPNA
Sbjct: 246 VLVSFGKWEFDPTELTNPSTENKRSVHMWQGGADRVIPIEFSRFVAQKLPWIHYHEVPNA 305

Query: 61  GHLIVHEAERFRAIIKTLLA 81
           GHLIVHE E  +AII+ L A
Sbjct: 306 GHLIVHEGESLKAIIRALTA 325

[Close]

BLAST of HG10018134 vs. NCBI nr
Match: KAE8652803.1 (hypothetical protein Csa_022698 [Cucumis sativus])

HSP 1 Score: 147.9 bits (372), Expect = 3.8e-32
Identity = 65/80 (81.25%), Postives = 71/80 (88.75%), Query Frame = 0


Query: 1   MLVSFGKWEFDPLELTNPFTENKGSVHIWQGGADRVIPIEFNRFIAQKLPWIQYHEVPNA 60
           +LVSFGKWEFDP ELTNP TENK SVH+WQGGADRVIPIEF+RF+AQKLPWI YHEVPNA
Sbjct: 179 VLVSFGKWEFDPTELTNPSTENKRSVHMWQGGADRVIPIEFSRFVAQKLPWIHYHEVPNA 238

Query: 61  GHLIVHEAERFRAIIKTLLA 81
           GHLIVHE E  +AII+ L A
Sbjct: 239 GHLIVHEGESLKAIIRALTA 258

[Close]

BLAST of HG10018134 vs. NCBI nr
Match: XP_038894586.1 (uncharacterized protein LOC120083104 [Benincasa hispida])

HSP 1 Score: 146.7 bits (369), Expect = 8.4e-32
Identity = 59/81 (72.84%), Postives = 72/81 (88.89%), Query Frame = 0


Query: 1   MLVSFGKWEFDPLELTNPFTENKGSVHIWQGGADRVIPIEFNRFIAQKLPWIQYHEVPNA 60
           +LV+FGKW+FDP+ELTNPFT NKG VH+WQG ADRV+P+E N FIA+KLPWIQYHE+PNA
Sbjct: 257 ILVAFGKWDFDPIELTNPFTHNKGCVHMWQGSADRVVPVELNHFIAKKLPWIQYHEIPNA 316

Query: 61  GHLIVHEAERFRAIIKTLLAG 82
           GHL+VH+ E F AI++ LLAG
Sbjct: 317 GHLLVHDDESFEAILRALLAG 337

[Close]

BLAST of HG10018134 vs. NCBI nr
Match: XP_016902785.1 (PREDICTED: uncharacterized protein LOC103500177 [Cucumis melo])

HSP 1 Score: 146.0 bits (367), Expect = 1.4e-31
Identity = 64/80 (80.00%), Postives = 72/80 (90.00%), Query Frame = 0


Query: 1   MLVSFGKWEFDPLELTNPFTENKGSVHIWQGGADRVIPIEFNRFIAQKLPWIQYHEVPNA 60
           +LVSFGKWEFDP ELTNP TE+  SVH+WQGGADRVIPIEF+RF+AQKLPWIQYHEVPNA
Sbjct: 257 VLVSFGKWEFDPTELTNPSTESIRSVHMWQGGADRVIPIEFSRFVAQKLPWIQYHEVPNA 316

Query: 61  GHLIVHEAERFRAIIKTLLA 81
           GHLIVHE E  +AII+ L+A
Sbjct: 317 GHLIVHEGESLKAIIRALIA 336

[Close]

BLAST of HG10018134 vs. ExPASy TrEMBL
Match: A0A0A0LT05 (AB hydrolase-1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G160215 PE=4 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 1.8e-32
Identity = 65/80 (81.25%), Postives = 71/80 (88.75%), Query Frame = 0


Query: 1   MLVSFGKWEFDPLELTNPFTENKGSVHIWQGGADRVIPIEFNRFIAQKLPWIQYHEVPNA 60
           +LVSFGKWEFDP ELTNP TENK SVH+WQGGADRVIPIEF+RF+AQKLPWI YHEVPNA
Sbjct: 246 VLVSFGKWEFDPTELTNPSTENKRSVHMWQGGADRVIPIEFSRFVAQKLPWIHYHEVPNA 305

Query: 61  GHLIVHEAERFRAIIKTLLA 81
           GHLIVHE E  +AII+ L A
Sbjct: 306 GHLIVHEGESLKAIIRALTA 325

[Close]

BLAST of HG10018134 vs. ExPASy TrEMBL
Match: A0A5A7SXW7 (AB hydrolase-1 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold862G00500 PE=4 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 6.9e-32
Identity = 64/80 (80.00%), Postives = 72/80 (90.00%), Query Frame = 0


Query: 1   MLVSFGKWEFDPLELTNPFTENKGSVHIWQGGADRVIPIEFNRFIAQKLPWIQYHEVPNA 60
           +LVSFGKWEFDP ELTNP TE+  SVH+WQGGADRVIPIEF+RF+AQKLPWIQYHEVPNA
Sbjct: 246 VLVSFGKWEFDPTELTNPSTESIRSVHMWQGGADRVIPIEFSRFVAQKLPWIQYHEVPNA 305

Query: 61  GHLIVHEAERFRAIIKTLLA 81
           GHLIVHE E  +AII+ L+A
Sbjct: 306 GHLIVHEGESLKAIIRALIA 325

[Close]

BLAST of HG10018134 vs. ExPASy TrEMBL
Match: A0A1S4E478 (uncharacterized protein LOC103500177 OS=Cucumis melo OX=3656 GN=LOC103500177 PE=4 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 6.9e-32
Identity = 64/80 (80.00%), Postives = 72/80 (90.00%), Query Frame = 0


Query: 1   MLVSFGKWEFDPLELTNPFTENKGSVHIWQGGADRVIPIEFNRFIAQKLPWIQYHEVPNA 60
           +LVSFGKWEFDP ELTNP TE+  SVH+WQGGADRVIPIEF+RF+AQKLPWIQYHEVPNA
Sbjct: 257 VLVSFGKWEFDPTELTNPSTESIRSVHMWQGGADRVIPIEFSRFVAQKLPWIQYHEVPNA 316

Query: 61  GHLIVHEAERFRAIIKTLLA 81
           GHLIVHE E  +AII+ L+A
Sbjct: 317 GHLIVHEGESLKAIIRALIA 336

[Close]

BLAST of HG10018134 vs. ExPASy TrEMBL
Match: A0A5D3BMN2 (Alpha/beta-Hydrolases superfamily protein isoform 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G00610 PE=4 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 4.2e-29
Identity = 54/79 (68.35%), Postives = 67/79 (84.81%), Query Frame = 0


Query: 1   MLVSFGKWEFDPLELTNPFTENKGSVHIWQGGADRVIPIEFNRFIAQKLPWIQYHEVPNA 60
           ++ ++GKWEFDP+ELTNPF +NKGSVH+WQG  DRV+PIE NRFIAQKLPWIQYHE+PN 
Sbjct: 189 LVCTYGKWEFDPMELTNPFPDNKGSVHMWQGSQDRVVPIELNRFIAQKLPWIQYHELPNY 248

Query: 61  GHLIVHEAERFRAIIKTLL 80
           GHL++HE   F  I++ LL
Sbjct: 249 GHLLIHEPPNFELILRALL 267

[Close]

BLAST of HG10018134 vs. ExPASy TrEMBL
Match: A0A5A7TCB6 (Alpha/beta-Hydrolases superfamily protein isoform 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold64G00620 PE=4 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 4.2e-29
Identity = 54/79 (68.35%), Postives = 67/79 (84.81%), Query Frame = 0


Query: 1   MLVSFGKWEFDPLELTNPFTENKGSVHIWQGGADRVIPIEFNRFIAQKLPWIQYHEVPNA 60
           ++ ++GKWEFDP+ELTNPF +NKGSVH+WQG  DRV+PIE NRFIAQKLPWIQYHE+PN 
Sbjct: 233 LVCTYGKWEFDPMELTNPFPDNKGSVHMWQGSQDRVVPIELNRFIAQKLPWIQYHELPNY 292

Query: 61  GHLIVHEAERFRAIIKTLL 80
           GHL++HE   F  I++ LL
Sbjct: 293 GHLLIHEPPNFELILRALL 311

[Close]

BLAST of HG10018134 vs. TAIR 10
Match: AT5G22460.1 (alpha/beta-Hydrolases superfamily protein )

HSP 1 Score: 112.8 bits (281), Expect = 1.3e-25
Identity = 47/79 (59.49%), Postives = 58/79 (73.42%), Query Frame = 0


Query: 1   MLVSFGKWEFDPLELTNPFTENKGSVHIWQGGADRVIPIEFNRFIAQKLPWIQYHEVPNA 60
           M+  F  WEFDP EL NPF E +GSVH+WQG  DR+IP E NR+I++KLPWI+YHEV   
Sbjct: 260 MIAGFATWEFDPTELENPFAEGEGSVHVWQGMEDRIIPYEINRYISEKLPWIKYHEVLGY 319

Query: 61  GHLIVHEAERFRAIIKTLL 80
           GHL+  E E+ + IIK LL
Sbjct: 320 GHLLNAEEEKCKDIIKALL 338

[Close]

BLAST of HG10018134 vs. TAIR 10
Match: AT5G22460.2 (alpha/beta-Hydrolases superfamily protein )

HSP 1 Score: 112.8 bits (281), Expect = 1.3e-25
Identity = 47/79 (59.49%), Postives = 58/79 (73.42%), Query Frame = 0


Query: 1   MLVSFGKWEFDPLELTNPFTENKGSVHIWQGGADRVIPIEFNRFIAQKLPWIQYHEVPNA 60
           M+  F  WEFDP EL NPF E +GSVH+WQG  DR+IP E NR+I++KLPWI+YHEV   
Sbjct: 260 MIAGFATWEFDPTELENPFAEGEGSVHVWQGMEDRIIPYEINRYISEKLPWIKYHEVLGY 319

Query: 61  GHLIVHEAERFRAIIKTLL 80
           GHL+  E E+ + IIK LL
Sbjct: 320 GHLLNAEEEKCKDIIKALL 338

[Close]

BLAST of HG10018134 vs. TAIR 10
Match: AT2G36290.1 (alpha/beta-Hydrolases superfamily protein )

HSP 1 Score: 107.8 bits (268), Expect = 4.0e-24
Identity = 44/79 (55.70%), Postives = 55/79 (69.62%), Query Frame = 0


Query: 1   MLVSFGKWEFDPLELTNPFTENKGSVHIWQGGADRVIPIEFNRFIAQKLPWIQYHEVPNA 60
           M+V FG WEFDP+EL N F  N+GSVH+WQG  D ++P+   R+IA+KLPWI YHE+P A
Sbjct: 279 MIVGFGTWEFDPMELENLFPNNEGSVHLWQGDDDVLVPVTLQRYIAKKLPWIHYHEIPGA 338

Query: 61  GHLIVHEAERFRAIIKTLL 80
           GHL          I+KTLL
Sbjct: 339 GHLFPFAPGMVNNIVKTLL 357

[Close]

BLAST of HG10018134 vs. TAIR 10
Match: AT3G54240.1 (alpha/beta-Hydrolases superfamily protein )

HSP 1 Score: 104.8 bits (260), Expect = 3.4e-23
Identity = 41/79 (51.90%), Postives = 56/79 (70.89%), Query Frame = 0


Query: 1   MLVSFGKWEFDPLELTNPFTENKGSVHIWQGGADRVIPIEFNRFIAQKLPWIQYHEVPNA 60
           ++V FGKW FDP+++ NPF + +GSVH+WQG  DR++PI+  R IAQKL WI+YHE+P A
Sbjct: 266 LIVGFGKWSFDPMKIENPFPKGEGSVHMWQGDDDRLVPIQLQRIIAQKLTWIKYHEIPGA 325

Query: 61  GHLIVHEAERFRAIIKTLL 80
           GH+          I+K LL
Sbjct: 326 GHIFPMADGMAETILKELL 344

[Close]

BLAST of HG10018134 vs. TAIR 10
Match: AT1G74290.1 (alpha/beta-Hydrolases superfamily protein )

HSP 1 Score: 101.7 bits (252), Expect = 2.9e-22
Identity = 39/79 (49.37%), Postives = 53/79 (67.09%), Query Frame = 0


Query: 1   MLVSFGKWEFDPLELTNPFTENKGSVHIWQGGADRVIPIEFNRFIAQKLPWIQYHEVPNA 60
           M+V FG WEFDPL+L NPF  N+G VH+WQG  D ++P++  R++A +LPW+ YHEVP +
Sbjct: 284 MIVGFGNWEFDPLDLDNPFLNNEGFVHLWQGDEDMLVPVKLQRYLAHQLPWVHYHEVPRS 343

Query: 61  GHLIVHEAERFRAIIKTLL 80
           GH           I+ TLL
Sbjct: 344 GHFFHFTKGVVDNIVTTLL 362

The following BLAST results are available for this feature:

BLAST of HG10018134 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038895419.1	2.5e-36	85.19	uncharacterized protein LOC120083658 [Benincasa hispida]	[more]
XP_004139577.1	3.8e-32	81.25	uncharacterized protein LOC101208214 [Cucumis sativus]	[more]
KAE8652803.1	3.8e-32	81.25	hypothetical protein Csa_022698 [Cucumis sativus]	[more]
XP_038894586.1	8.4e-32	72.84	uncharacterized protein LOC120083104 [Benincasa hispida]	[more]
XP_016902785.1	1.4e-31	80.00	PREDICTED: uncharacterized protein LOC103500177 [Cucumis melo]	[more]

BLAST of HG10018134 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of HG10018134 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LT05	1.8e-32	81.25	AB hydrolase-1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G160...	[more]
A0A5A7SXW7	6.9e-32	80.00	AB hydrolase-1 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A1S4E478	6.9e-32	80.00	uncharacterized protein LOC103500177 OS=Cucumis melo OX=3656 GN=LOC103500177 PE=...	[more]
A0A5D3BMN2	4.2e-29	68.35	Alpha/beta-Hydrolases superfamily protein isoform 1 OS=Cucumis melo var. makuwa ...	[more]
A0A5A7TCB6	4.2e-29	68.35	Alpha/beta-Hydrolases superfamily protein isoform 1 OS=Cucumis melo var. makuwa ...	[more]

BLAST of HG10018134 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G22460.1	1.3e-25	59.49	alpha/beta-Hydrolases superfamily protein	[more]
AT5G22460.2	1.3e-25	59.49	alpha/beta-Hydrolases superfamily protein	[more]
AT2G36290.1	4.0e-24	55.70	alpha/beta-Hydrolases superfamily protein	[more]
AT3G54240.1	3.4e-23	51.90	alpha/beta-Hydrolases superfamily protein	[more]
AT1G74290.1	2.9e-22	49.37	alpha/beta-Hydrolases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR029058	Alpha/Beta hydrolase fold	GENE3D	3.40.50.1820	alpha/beta hydrolase	coord: 1..80 e-value: 1.3E-9 score: 40.1
IPR029058	Alpha/Beta hydrolase fold	SUPERFAMILY	53474	alpha/beta-Hydrolases	coord: 16..75
None	No IPR available	PANTHER	PTHR45763	HYDROLASE, ALPHA/BETA FOLD FAMILY PROTEIN, EXPRESSED-RELATED	coord: 1..80
None	No IPR available	PANTHER	PTHR45763:SF21	ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN	coord: 1..80

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10018134.1	HG10018134.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0016787	hydrolase activity