HG10018126 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10018126
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Ferredoxin
Location	Chr04: 620783 .. 621238 (-)
RNA-Seq Expression	HG10018126
Synteny	HG10018126

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCAACTGCAAAGCTCCCTACCAACTTCATGTACAATGCGCCATGTAAAAATCGACTCAGAAGCACCATTATCAAGTGTCCATCGTTAATCGGATCTACGAGCAACATTTCGAAATCCTTCGGCTTGAAATCATGTCCCTCATTTAGAGCCTGTGCAATGGCAGTTTACAAGATCAAACTTGTTGAACCATGTGGGAAAGAGCATGAGTTTGAGGCATCTGATGATACTTACATTCTAGATGCAGCTGAAGAAGCAGGAGTAGACCTACCATATTCTTGCAGGGCAGGCGCGTGTTCTACGTGCGCCGGGAAAATGGTTTTGGGTTCAGTCGATCAGTCGGATGGGTCGTTCCTTGATGATAGTCAAATGGCAGAGGGTTATTTGTTAACTTGTGTTTCAATCCCAACTGCAGACTGTGTGATTCACACACATAAGGAAGGAGAACTGATCTGA

mRNA sequence

ATGTCAACTGCAAAGCTCCCTACCAACTTCATGTACAATGCGCCATGTAAAAATCGACTCAGAAGCACCATTATCAAGTGTCCATCGTTAATCGGATCTACGAGCAACATTTCGAAATCCTTCGGCTTGAAATCATGTCCCTCATTTAGAGCCTGTGCAATGGCAGTTTACAAGATCAAACTTGTTGAACCATGTGGGAAAGAGCATGAGTTTGAGGCATCTGATGATACTTACATTCTAGATGCAGCTGAAGAAGCAGGAGTAGACCTACCATATTCTTGCAGGGCAGGCGCGTGTTCTACGTGCGCCGGGAAAATGGTTTTGGGTTCAGTCGATCAGTCGGATGGGTCGTTCCTTGATGATAGTCAAATGGCAGAGGGTTATTTGTTAACTTGTGTTTCAATCCCAACTGCAGACTGTGTGATTCACACACATAAGGAAGGAGAACTGATCTGA

Coding sequence (CDS)

ATGTCAACTGCAAAGCTCCCTACCAACTTCATGTACAATGCGCCATGTAAAAATCGACTCAGAAGCACCATTATCAAGTGTCCATCGTTAATCGGATCTACGAGCAACATTTCGAAATCCTTCGGCTTGAAATCATGTCCCTCATTTAGAGCCTGTGCAATGGCAGTTTACAAGATCAAACTTGTTGAACCATGTGGGAAAGAGCATGAGTTTGAGGCATCTGATGATACTTACATTCTAGATGCAGCTGAAGAAGCAGGAGTAGACCTACCATATTCTTGCAGGGCAGGCGCGTGTTCTACGTGCGCCGGGAAAATGGTTTTGGGTTCAGTCGATCAGTCGGATGGGTCGTTCCTTGATGATAGTCAAATGGCAGAGGGTTATTTGTTAACTTGTGTTTCAATCCCAACTGCAGACTGTGTGATTCACACACATAAGGAAGGAGAACTGATCTGA

Protein sequence

MSTAKLPTNFMYNAPCKNRLRSTIIKCPSLIGSTSNISKSFGLKSCPSFRACAMAVYKIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKMVLGSVDQSDGSFLDDSQMAEGYLLTCVSIPTADCVIHTHKEGELI

Homology

[Close]

BLAST of HG10018126 vs. NCBI nr
Match: XP_038893731.1 (ferredoxin, root R-B2 [Benincasa hispida] >XP_038893732.1 ferredoxin, root R-B2 [Benincasa hispida])

HSP 1 Score: 280.4 bits (716), Expect = 9.1e-72
Identity = 137/151 (90.73%), Postives = 141/151 (93.38%), Query Frame = 0


Query: 1   MSTAKLPTNFMYNAPCKNRLRSTIIKCPSLIGSTSNISKSFGLKSCPSFRACAMAVYKIK 60
           MSTAKL T+FMYNAPCKNRLRSTIIKCPS I S SNISK FGLKS PSFRACAMAVYKIK
Sbjct: 4   MSTAKLSTHFMYNAPCKNRLRSTIIKCPSSISSMSNISKFFGLKSRPSFRACAMAVYKIK 63

Query: 61  LVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKMVLGSVDQSDGSFLD 120
           LVEP G EHEFEASDD YILDAAEEAG+DLPYSCRAGACSTCAGKMV GSVDQSDGSFLD
Sbjct: 64  LVEPSGTEHEFEASDDAYILDAAEEAGIDLPYSCRAGACSTCAGKMVSGSVDQSDGSFLD 123

Query: 121 DSQMAEGYLLTCVSIPTADCVIHTHKEGELI 152
           DSQMAEGYLLTCVS+PTADCVIHTHKEGEL+
Sbjct: 124 DSQMAEGYLLTCVSLPTADCVIHTHKEGELL 154

[Close]

BLAST of HG10018126 vs. NCBI nr
Match: XP_022142635.1 (ferredoxin, root R-B2 [Momordica charantia])

HSP 1 Score: 275.4 bits (703), Expect = 2.9e-70
Identity = 134/151 (88.74%), Postives = 139/151 (92.05%), Query Frame = 0


Query: 1   MSTAKLPTNFMYNAPCKNRLRSTIIKCPSLIGSTSNISKSFGLKSCPSFRACAMAVYKIK 60
           MSTA LP+ F  NAPCKNR R TIIKCPS IGS SNIS+SFGLKS PSFR  AMAVYKIK
Sbjct: 4   MSTATLPSRFTLNAPCKNRYRITIIKCPSSIGSASNISRSFGLKSSPSFRTSAMAVYKIK 63

Query: 61  LVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKMVLGSVDQSDGSFLD 120
           LVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGK+V GSVDQSDGSFLD
Sbjct: 64  LVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKVVSGSVDQSDGSFLD 123

Query: 121 DSQMAEGYLLTCVSIPTADCVIHTHKEGELI 152
           D+QMAEGYLLTCVS+PTADCVIHTHKEGELI
Sbjct: 124 DTQMAEGYLLTCVSLPTADCVIHTHKEGELI 154

[Close]

BLAST of HG10018126 vs. NCBI nr
Match: KGN64931.1 (hypothetical protein Csa_022774 [Cucumis sativus])

HSP 1 Score: 271.9 bits (694), Expect = 3.2e-69
Identity = 131/151 (86.75%), Postives = 138/151 (91.39%), Query Frame = 0


Query: 1   MSTAKLPTNFMYNAPCKNRLRSTIIKCPSLIGSTSNISKSFGLKSCPSFRACAMAVYKIK 60
           MSTAKLPT+FMYN   KN+L STIIKCPS IGST NI KSFGL S PSFRACAMA +KIK
Sbjct: 4   MSTAKLPTHFMYNTQSKNQLGSTIIKCPSSIGSTRNILKSFGLNSRPSFRACAMAAFKIK 63

Query: 61  LVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKMVLGSVDQSDGSFLD 120
           LVEPCGKEHEFEASDDTYILDAAEEAG+DLPYSCRAGACSTCAGK+V GSVDQSDGSFLD
Sbjct: 64  LVEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQSDGSFLD 123

Query: 121 DSQMAEGYLLTCVSIPTADCVIHTHKEGELI 152
           D QMA GYLLTC+S+PTADCVIHTHKEGELI
Sbjct: 124 DDQMANGYLLTCISLPTADCVIHTHKEGELI 154

[Close]

BLAST of HG10018126 vs. NCBI nr
Match: XP_022944832.1 (uncharacterized protein LOC111449248 isoform X1 [Cucurbita moschata])

HSP 1 Score: 265.0 bits (676), Expect = 4.0e-67
Identity = 131/153 (85.62%), Postives = 138/153 (90.20%), Query Frame = 0


Query: 1   MSTAKLPTNFMYN--APCKNRLRSTIIKCPSLIGSTSNISKSFGLKSCPSFRACAMAVYK 60
           MSTAKLP+  M+N  APCKN+ RSTIIKCPS IGSTSNISKSFGLKS PS R  AMAVYK
Sbjct: 67  MSTAKLPSRTMFNTSAPCKNQFRSTIIKCPSSIGSTSNISKSFGLKSSPSSRTTAMAVYK 126

Query: 61  IKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKMVLGSVDQSDGSF 120
           IKL+EPCGKEHEFEASDDTYILDAAEEAG+DLPYSCRAGACSTCAGK V GSVDQSDGSF
Sbjct: 127 IKLIEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKFVSGSVDQSDGSF 186

Query: 121 LDDSQMAEGYLLTCVSIPTADCVIHTHKEGELI 152
           LDDSQM EGYLLTC+S PT+DCVI THKEGELI
Sbjct: 187 LDDSQMEEGYLLTCISHPTSDCVILTHKEGELI 219

[Close]

BLAST of HG10018126 vs. NCBI nr
Match: KAG6573622.1 (Ferredoxin-3, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 265.0 bits (676), Expect = 4.0e-67
Identity = 131/153 (85.62%), Postives = 138/153 (90.20%), Query Frame = 0


Query: 1   MSTAKLPTNFMYN--APCKNRLRSTIIKCPSLIGSTSNISKSFGLKSCPSFRACAMAVYK 60
           MSTAKLP+  M+N  APCKN+ RSTIIKCPS IGSTSNISKSFGLKS PS R  AMAVYK
Sbjct: 1   MSTAKLPSRTMFNTSAPCKNQFRSTIIKCPSSIGSTSNISKSFGLKSSPSSRTTAMAVYK 60

Query: 61  IKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKMVLGSVDQSDGSF 120
           IKL+EPCGKEHEFEASDDTYILDAAEEAG+DLPYSCRAGACSTCAGK V GSVDQSDGSF
Sbjct: 61  IKLIEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKFVSGSVDQSDGSF 120

Query: 121 LDDSQMAEGYLLTCVSIPTADCVIHTHKEGELI 152
           LDDSQM EGYLLTC+S PT+DCVI THKEGELI
Sbjct: 121 LDDSQMEEGYLLTCISHPTSDCVILTHKEGELI 153

[Close]

BLAST of HG10018126 vs. ExPASy Swiss-Prot
Match: P27788 (Ferredoxin-3, chloroplastic OS=Zea mays OX=4577 GN=FDX3 PE=1 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 6.4e-44
Identity = 86/128 (67.19%), Postives = 99/128 (77.34%), Query Frame = 0


Query: 23  TIIKCPSLIGSTSNISKSFGLKSCPSFRACAMAVYKIKLVEPCGKEHEFEASDDTYILDA 82
           T +K PS +   S ++K   LK+       AMAVYK+KLV P G+EHEF+A DD YILDA
Sbjct: 24  TAVKSPSSLSFFSQVTKVPSLKTSKKLDVSAMAVYKVKLVGPEGEEHEFDAPDDAYILDA 83

Query: 83  AEEAGVDLPYSCRAGACSTCAGKMVLGSVDQSDGSFLDDSQMAEGYLLTCVSIPTADCVI 142
           AE AGV+LPYSCRAGACSTCAGK+  GSVDQSDGSFLDD Q  EGY+LTCVS P +DCVI
Sbjct: 84  AETAGVELPYSCRAGACSTCAGKIESGSVDQSDGSFLDDGQQEEGYVLTCVSYPKSDCVI 143

Query: 143 HTHKEGEL 151
           HTHKEG+L
Sbjct: 144 HTHKEGDL 151

[Close]

BLAST of HG10018126 vs. ExPASy Swiss-Prot
Match: Q9ZQG8 (Ferredoxin-3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FD3 PE=1 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 4.1e-43
Identity = 90/154 (58.44%), Postives = 114/154 (74.03%), Query Frame = 0


Query: 1   MSTAKLPTNFMYNAPCKNRLRSTIIKCPSL---IGSTSNISKSFGLK-SCPSFRACAMAV 60
           M+T ++ +  M  A  +++  + +I   S    +GST  +S+SFGLK S  S  A   AV
Sbjct: 1   MATVRISSTSMTKAVLRSQTTNKLITNKSYNLSVGSTKRVSRSFGLKCSANSGGATMSAV 60

Query: 61  YKIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKMVLGSVDQSDG 120
           YK+KL+ P G+E EFE  DD YILDAAEEAGVDLPYSCRAGACSTCAG++V G+VDQSDG
Sbjct: 61  YKVKLLGPDGQEDEFEVQDDQYILDAAEEAGVDLPYSCRAGACSTCAGQIVSGNVDQSDG 120

Query: 121 SFLDDSQMAEGYLLTCVSIPTADCVIHTHKEGEL 151
           SFL+DS + +GY+LTCV+ P +DCVIHTHKE EL
Sbjct: 121 SFLEDSHLEKGYVLTCVAYPQSDCVIHTHKETEL 154

[Close]

BLAST of HG10018126 vs. ExPASy Swiss-Prot
Match: P94044 (Ferredoxin-6, chloroplastic OS=Zea mays OX=4577 GN=FDX6 PE=2 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 4.7e-39
Identity = 80/123 (65.04%), Postives = 94/123 (76.42%), Query Frame = 0


Query: 29  SLIGSTSNISKSFGLKSCPSFRACAMAV-YKIKLVEPCGKEHEFEASDDTYILDAAEEAG 88
           S  G     +++ G +    F A A AV +K+KLV P G EHEFEA DDTYIL+AAE AG
Sbjct: 32  SFAGHARQAARASGPRLSSRFVASAAAVLHKVKLVGPDGTEHEFEAPDDTYILEAAETAG 91

Query: 89  VDLPYSCRAGACSTCAGKMVLGSVDQSDGSFLDDSQMAEGYLLTCVSIPTADCVIHTHKE 148
           V+LP+SCRAG+CSTCAG+M  G VDQS+GSFLDD QMAEGYLLTC+S P ADCVIHTHKE
Sbjct: 92  VELPFSCRAGSCSTCAGRMSAGEVDQSEGSFLDDGQMAEGYLLTCISYPKADCVIHTHKE 151

Query: 149 GEL 151
            +L
Sbjct: 152 EDL 154

[Close]

BLAST of HG10018126 vs. ExPASy Swiss-Prot
Match: P14937 (Ferredoxin, root R-B2 OS=Raphanus sativus OX=3726 PE=1 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 8.3e-36
Identity = 68/96 (70.83%), Postives = 82/96 (85.42%), Query Frame = 0


Query: 55  AVYKIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKMVLGSVDQS 114
           AVYK+KL+ P G+E+EFE  DD +ILDAAEEAGVDLPYSCRAGACSTCAG++V G VDQS
Sbjct: 2   AVYKVKLIGPEGEENEFEVQDDQFILDAAEEAGVDLPYSCRAGACSTCAGQIVKGQVDQS 61

Query: 115 DGSFLDDSQMAEGYLLTCVSIPTADCVIHTHKEGEL 151
           +GSFL+D    +G++LTCV+ P +DCVIHTHKE EL
Sbjct: 62  EGSFLEDDHFEKGFVLTCVAYPQSDCVIHTHKETEL 97

[Close]

BLAST of HG10018126 vs. ExPASy Swiss-Prot
Match: P14936 (Ferredoxin, root R-B1 OS=Raphanus sativus OX=3726 PE=1 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 2.4e-35
Identity = 69/96 (71.88%), Postives = 80/96 (83.33%), Query Frame = 0


Query: 55  AVYKIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKMVLGSVDQS 114
           AVYK+KL+ P G+E+EF+  DD YILDAAEEAGVDLPYSCRAGACSTCAGK+  G VDQS
Sbjct: 2   AVYKVKLIGPDGQENEFDVPDDQYILDAAEEAGVDLPYSCRAGACSTCAGKIEKGQVDQS 61

Query: 115 DGSFLDDSQMAEGYLLTCVSIPTADCVIHTHKEGEL 151
           DGSFL+D    +GY+LTCV+ P +D VIHTHKE EL
Sbjct: 62  DGSFLEDHHFEKGYVLTCVAYPQSDLVIHTHKEEEL 97

[Close]

BLAST of HG10018126 vs. ExPASy TrEMBL
Match: A0A6J1CLH4 (Ferredoxin OS=Momordica charantia OX=3673 GN=LOC111012698 PE=3 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 1.4e-70
Identity = 134/151 (88.74%), Postives = 139/151 (92.05%), Query Frame = 0


Query: 1   MSTAKLPTNFMYNAPCKNRLRSTIIKCPSLIGSTSNISKSFGLKSCPSFRACAMAVYKIK 60
           MSTA LP+ F  NAPCKNR R TIIKCPS IGS SNIS+SFGLKS PSFR  AMAVYKIK
Sbjct: 4   MSTATLPSRFTLNAPCKNRYRITIIKCPSSIGSASNISRSFGLKSSPSFRTSAMAVYKIK 63

Query: 61  LVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKMVLGSVDQSDGSFLD 120
           LVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGK+V GSVDQSDGSFLD
Sbjct: 64  LVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKVVSGSVDQSDGSFLD 123

Query: 121 DSQMAEGYLLTCVSIPTADCVIHTHKEGELI 152
           D+QMAEGYLLTCVS+PTADCVIHTHKEGELI
Sbjct: 124 DTQMAEGYLLTCVSLPTADCVIHTHKEGELI 154

[Close]

BLAST of HG10018126 vs. ExPASy TrEMBL
Match: A0A0A0LY90 (Ferredoxin OS=Cucumis sativus OX=3659 GN=Csa_1G163160 PE=3 SV=1)

HSP 1 Score: 271.9 bits (694), Expect = 1.6e-69
Identity = 131/151 (86.75%), Postives = 138/151 (91.39%), Query Frame = 0


Query: 1   MSTAKLPTNFMYNAPCKNRLRSTIIKCPSLIGSTSNISKSFGLKSCPSFRACAMAVYKIK 60
           MSTAKLPT+FMYN   KN+L STIIKCPS IGST NI KSFGL S PSFRACAMA +KIK
Sbjct: 4   MSTAKLPTHFMYNTQSKNQLGSTIIKCPSSIGSTRNILKSFGLNSRPSFRACAMAAFKIK 63

Query: 61  LVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKMVLGSVDQSDGSFLD 120
           LVEPCGKEHEFEASDDTYILDAAEEAG+DLPYSCRAGACSTCAGK+V GSVDQSDGSFLD
Sbjct: 64  LVEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQSDGSFLD 123

Query: 121 DSQMAEGYLLTCVSIPTADCVIHTHKEGELI 152
           D QMA GYLLTC+S+PTADCVIHTHKEGELI
Sbjct: 124 DDQMANGYLLTCISLPTADCVIHTHKEGELI 154

[Close]

BLAST of HG10018126 vs. ExPASy TrEMBL
Match: A0A6J1FZ83 (Ferredoxin OS=Cucurbita moschata OX=3662 GN=LOC111449248 PE=3 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 1.9e-67
Identity = 131/153 (85.62%), Postives = 138/153 (90.20%), Query Frame = 0


Query: 1   MSTAKLPTNFMYN--APCKNRLRSTIIKCPSLIGSTSNISKSFGLKSCPSFRACAMAVYK 60
           MSTAKLP+  M+N  APCKN+ RSTIIKCPS IGSTSNISKSFGLKS PS R  AMAVYK
Sbjct: 67  MSTAKLPSRTMFNTSAPCKNQFRSTIIKCPSSIGSTSNISKSFGLKSSPSSRTTAMAVYK 126

Query: 61  IKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKMVLGSVDQSDGSF 120
           IKL+EPCGKEHEFEASDDTYILDAAEEAG+DLPYSCRAGACSTCAGK V GSVDQSDGSF
Sbjct: 127 IKLIEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKFVSGSVDQSDGSF 186

Query: 121 LDDSQMAEGYLLTCVSIPTADCVIHTHKEGELI 152
           LDDSQM EGYLLTC+S PT+DCVI THKEGELI
Sbjct: 187 LDDSQMEEGYLLTCISHPTSDCVILTHKEGELI 219

[Close]

BLAST of HG10018126 vs. ExPASy TrEMBL
Match: A0A6J1FZ54 (Ferredoxin OS=Cucurbita moschata OX=3662 GN=LOC111449248 PE=3 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 1.9e-67
Identity = 131/153 (85.62%), Postives = 138/153 (90.20%), Query Frame = 0


Query: 1   MSTAKLPTNFMYN--APCKNRLRSTIIKCPSLIGSTSNISKSFGLKSCPSFRACAMAVYK 60
           MSTAKLP+  M+N  APCKN+ RSTIIKCPS IGSTSNISKSFGLKS PS R  AMAVYK
Sbjct: 4   MSTAKLPSRTMFNTSAPCKNQFRSTIIKCPSSIGSTSNISKSFGLKSSPSSRTTAMAVYK 63

Query: 61  IKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKMVLGSVDQSDGSF 120
           IKL+EPCGKEHEFEASDDTYILDAAEEAG+DLPYSCRAGACSTCAGK V GSVDQSDGSF
Sbjct: 64  IKLIEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKFVSGSVDQSDGSF 123

Query: 121 LDDSQMAEGYLLTCVSIPTADCVIHTHKEGELI 152
           LDDSQM EGYLLTC+S PT+DCVI THKEGELI
Sbjct: 124 LDDSQMEEGYLLTCISHPTSDCVILTHKEGELI 156

[Close]

BLAST of HG10018126 vs. ExPASy TrEMBL
Match: A0A5A7SWN7 (Ferredoxin OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold285G00770 PE=3 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 2.5e-67
Identity = 131/151 (86.75%), Postives = 138/151 (91.39%), Query Frame = 0


Query: 1   MSTAKLPTNFMYNAPCKNRLRSTIIKCPSLIGSTSNISKSFGLKSCPSFRACAMAVYKIK 60
           MSTAKLPT+FMYN   KN+L STIIKCPS IGST NI KSFGL S PSFRA AMAV+KIK
Sbjct: 4   MSTAKLPTHFMYNTQSKNQLGSTIIKCPSSIGSTRNIWKSFGLNSRPSFRARAMAVFKIK 63

Query: 61  LVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKMVLGSVDQSDGSFLD 120
           LVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGK+V GSV+QSDGSFLD
Sbjct: 64  LVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKIVSGSVNQSDGSFLD 123

Query: 121 DSQMAEGYLLTCVSIPTADCVIHTHKEGELI 152
           D QMA+GYLLTCVS+PTADCVIHTHKE ELI
Sbjct: 124 DDQMAKGYLLTCVSLPTADCVIHTHKEEELI 154

[Close]

BLAST of HG10018126 vs. TAIR 10
Match: AT2G27510.1 (ferredoxin 3 )

HSP 1 Score: 175.6 bits (444), Expect = 2.9e-44
Identity = 90/154 (58.44%), Postives = 114/154 (74.03%), Query Frame = 0


Query: 1   MSTAKLPTNFMYNAPCKNRLRSTIIKCPSL---IGSTSNISKSFGLK-SCPSFRACAMAV 60
           M+T ++ +  M  A  +++  + +I   S    +GST  +S+SFGLK S  S  A   AV
Sbjct: 1   MATVRISSTSMTKAVLRSQTTNKLITNKSYNLSVGSTKRVSRSFGLKCSANSGGATMSAV 60

Query: 61  YKIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKMVLGSVDQSDG 120
           YK+KL+ P G+E EFE  DD YILDAAEEAGVDLPYSCRAGACSTCAG++V G+VDQSDG
Sbjct: 61  YKVKLLGPDGQEDEFEVQDDQYILDAAEEAGVDLPYSCRAGACSTCAGQIVSGNVDQSDG 120

Query: 121 SFLDDSQMAEGYLLTCVSIPTADCVIHTHKEGEL 151
           SFL+DS + +GY+LTCV+ P +DCVIHTHKE EL
Sbjct: 121 SFLEDSHLEKGYVLTCVAYPQSDCVIHTHKETEL 154

[Close]

BLAST of HG10018126 vs. TAIR 10
Match: AT1G60950.1 (2Fe-2S ferredoxin-like superfamily protein )

HSP 1 Score: 149.4 bits (376), Expect = 2.3e-36
Identity = 79/153 (51.63%), Postives = 102/153 (66.67%), Query Frame = 0


Query: 1   MSTAKLPTNFMYNAPCKNRLRSTIIKCPSLIGSTSNISKSFGLKS--CPSFRACAMAVYK 60
           +S+A + T+F+  +P    LRS           ++N    FGLKS      R  AMA YK
Sbjct: 6   LSSAIVGTSFIRRSPAPISLRSL---------PSANTQSLFGLKSGTARGGRVTAMATYK 65

Query: 61  IKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKMVLGSVDQSDGSF 120
           +K + P G E E E  DD Y+LDAAEEAG+DLPYSCRAG+CS+CAGK+V GSVDQSD SF
Sbjct: 66  VKFITPEG-ELEVECDDDVYVLDAAEEAGIDLPYSCRAGSCSSCAGKVVSGSVDQSDQSF 125

Query: 121 LDDSQMAEGYLLTCVSIPTADCVIHTHKEGELI 152
           LDD Q+ EG++LTC + PT+D  I THKE +++
Sbjct: 126 LDDEQIGEGFVLTCAAYPTSDVTIETHKEEDIV 148

[Close]

BLAST of HG10018126 vs. TAIR 10
Match: AT1G10960.1 (ferredoxin 1 )

HSP 1 Score: 148.7 bits (374), Expect = 3.8e-36
Identity = 82/149 (55.03%), Postives = 103/149 (69.13%), Query Frame = 0


Query: 1   MSTAKLPTNFMYNAPCKNRLRSTIIKCPSLIGSTSNISKSFGLKSCPS--FRACAMAVYK 60
           +S+A + T+F+       R + T I   SL    +N    FGLKS  +   R  AMA YK
Sbjct: 6   LSSAIVSTSFL-------RRQQTPISLRSL--PFANTQSLFGLKSSTARGGRVTAMATYK 65

Query: 61  IKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKMVLGSVDQSDGSF 120
           +K + P G E E E  +D Y+LDAAEEAG+DLPYSCRAG+CS+CAGK+V GS+DQSD SF
Sbjct: 66  VKFITPEG-EQEVECEEDVYVLDAAEEAGLDLPYSCRAGSCSSCAGKVVSGSIDQSDQSF 125

Query: 121 LDDSQMAEGYLLTCVSIPTADCVIHTHKE 148
           LDD QM+EGY+LTCV+ PT+D VI THKE
Sbjct: 126 LDDEQMSEGYVLTCVAYPTSDVVIETHKE 144

[Close]

BLAST of HG10018126 vs. TAIR 10
Match: AT5G10000.1 (ferredoxin 4 )

HSP 1 Score: 126.7 bits (317), Expect = 1.6e-29
Identity = 52/94 (55.32%), Postives = 75/94 (79.79%), Query Frame = 0


Query: 58  KIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKMVLGSVDQSDGS 117
           K+KL+ P G+E E E ++D  IL++AE AG++LPYSCR+G C TC GK+V G VDQS GS
Sbjct: 55  KVKLISPEGEEQEIEGNEDCCILESAENAGLELPYSCRSGTCGTCCGKLVSGKVDQSLGS 114

Query: 118 FLDDSQMAEGYLLTCVSIPTADCVIHTHKEGELI 152
           FL++ Q+ +GY+LTC+++P  DCV++THK+ +LI
Sbjct: 115 FLEEEQIQKGYILTCIALPLEDCVVYTHKQSDLI 148

[Close]

BLAST of HG10018126 vs. TAIR 10
Match: AT4G14890.1 (2Fe-2S ferredoxin-like superfamily protein )

HSP 1 Score: 84.3 bits (207), Expect = 8.9e-17
Identity = 44/95 (46.32%), Postives = 55/95 (57.89%), Query Frame = 0


Query: 57  YKIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKMVLGSVDQSDG 116
           YK+ +VE  GK  E E   D  IL  A ++G+D+PY C  G C TC  K+V G+VDQS G
Sbjct: 53  YKV-VVEHDGKTTELEVEPDETILSKALDSGLDVPYDCNLGVCMTCPAKLVTGTVDQS-G 112

Query: 117 SFLDDSQMAEGYLLTCVSIPTADCVIHTHKEGELI 152
             L D  +  GY L C S PT+DC I    E EL+
Sbjct: 113 GMLSDDVVERGYTLLCASYPTSDCHIKMIPEEELL 145

The following BLAST results are available for this feature:

BLAST of HG10018126 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038893731.1	9.1e-72	90.73	ferredoxin, root R-B2 [Benincasa hispida] >XP_038893732.1 ferredoxin, root R-B2 ...	[more]
XP_022142635.1	2.9e-70	88.74	ferredoxin, root R-B2 [Momordica charantia]	[more]
KGN64931.1	3.2e-69	86.75	hypothetical protein Csa_022774 [Cucumis sativus]	[more]
XP_022944832.1	4.0e-67	85.62	uncharacterized protein LOC111449248 isoform X1 [Cucurbita moschata]	[more]
KAG6573622.1	4.0e-67	85.62	Ferredoxin-3, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of HG10018126 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P27788	6.4e-44	67.19	Ferredoxin-3, chloroplastic OS=Zea mays OX=4577 GN=FDX3 PE=1 SV=1	[more]
Q9ZQG8	4.1e-43	58.44	Ferredoxin-3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FD3 PE=1 SV=1	[more]
P94044	4.7e-39	65.04	Ferredoxin-6, chloroplastic OS=Zea mays OX=4577 GN=FDX6 PE=2 SV=1	[more]
P14937	8.3e-36	70.83	Ferredoxin, root R-B2 OS=Raphanus sativus OX=3726 PE=1 SV=1	[more]
P14936	2.4e-35	71.88	Ferredoxin, root R-B1 OS=Raphanus sativus OX=3726 PE=1 SV=1	[more]

BLAST of HG10018126 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CLH4	1.4e-70	88.74	Ferredoxin OS=Momordica charantia OX=3673 GN=LOC111012698 PE=3 SV=1	[more]
A0A0A0LY90	1.6e-69	86.75	Ferredoxin OS=Cucumis sativus OX=3659 GN=Csa_1G163160 PE=3 SV=1	[more]
A0A6J1FZ83	1.9e-67	85.62	Ferredoxin OS=Cucurbita moschata OX=3662 GN=LOC111449248 PE=3 SV=1	[more]
A0A6J1FZ54	1.9e-67	85.62	Ferredoxin OS=Cucurbita moschata OX=3662 GN=LOC111449248 PE=3 SV=1	[more]
A0A5A7SWN7	2.5e-67	86.75	Ferredoxin OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold285G00770 PE=...	[more]

BLAST of HG10018126 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G27510.1	2.9e-44	58.44	ferredoxin 3	[more]
AT1G60950.1	2.3e-36	51.63	2Fe-2S ferredoxin-like superfamily protein	[more]
AT1G10960.1	3.8e-36	55.03	ferredoxin 1	[more]
AT5G10000.1	1.6e-29	55.32	ferredoxin 4	[more]
AT4G14890.1	8.9e-17	46.32	2Fe-2S ferredoxin-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	PFAM	PF00111	Fer2	coord: 63..137 e-value: 6.8E-21 score: 74.0
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	PROSITE	PS51085	2FE2S_FER_2	coord: 57..148 score: 12.439738
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	CDD	cd00207	fer2	coord: 62..143 e-value: 9.08467E-30 score: 101.703
IPR012675	Beta-grasp domain superfamily	GENE3D	3.10.20.30		coord: 54..151 e-value: 5.5E-33 score: 114.7
IPR010241	Ferredoxin [2Fe-2S], plant	TIGRFAM	TIGR02008	TIGR02008	coord: 55..150 e-value: 1.9E-45 score: 150.6
None	No IPR available	PANTHER	PTHR43112:SF30	FERREDOXIN-3, CHLOROPLASTIC	coord: 1..150
None	No IPR available	PANTHER	PTHR43112	FERREDOXIN	coord: 1..150
IPR006058	2Fe-2S ferredoxin, iron-sulphur binding site	PROSITE	PS00197	2FE2S_FER_1	coord: 94..102
IPR036010	2Fe-2S ferredoxin-like superfamily	SUPERFAMILY	54292	2Fe-2S ferredoxin-like	coord: 53..148

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10018126.1	HG10018126.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022900	electron transport chain
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0051537	2 iron, 2 sulfur cluster binding
molecular_function	GO:0009055	electron transfer activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0051536	iron-sulfur cluster binding