HG10018054 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10018054
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
LocationChr03: 30009131 .. 30009334 (-)
RNA-Seq ExpressionHG10018054
SyntenyHG10018054
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCACATGTAGACTATGCTTCATTGGACGACAACGTGCCGGCGGCGGGAGGAGGAGGAGAATCGAGACCAACCGAAAATCCACACCATCAAGGAGTCTCAATTCCCCAAGCACAAATCGAGGCTTCAATCTCCTCCCATCAGCCAGCTCTGACCGATCACTCTTCTTGTGGCAGCAACTATGGCTGGCAATGCATCTCATGA

mRNA sequence

ATGTCACATGTAGACTATGCTTCATTGGACGACAACGTGCCGGCGGCGGGAGGAGGAGGAGAATCGAGACCAACCGAAAATCCACACCATCAAGGAGTCTCAATTCCCCAAGCACAAATCGAGGCTTCAATCTCCTCCCATCAGCCAGCTCTGACCGATCACTCTTCTTGTGGCAGCAACTATGGCTGGCAATGCATCTCATGA

Coding sequence (CDS)

ATGTCACATGTAGACTATGCTTCATTGGACGACAACGTGCCGGCGGCGGGAGGAGGAGGAGAATCGAGACCAACCGAAAATCCACACCATCAAGGAGTCTCAATTCCCCAAGCACAAATCGAGGCTTCAATCTCCTCCCATCAGCCAGCTCTGACCGATCACTCTTCTTGTGGCAGCAACTATGGCTGGCAATGCATCTCATGA

Protein sequence

MSHVDYASLDDNVPAAGGGGESRPTENPHHQGVSIPQAQIEASISSHQPALTDHSSCGSNYGWQCIS
Homology
The following BLAST results are available for this feature:
BLAST of HG10018054 vs.
Match NameE-valueIdentityDescription
BLAST of HG10018054 vs.
Match NameE-valueIdentityDescription
BLAST of HG10018054 vs.
Match NameE-valueIdentityDescription
BLAST of HG10018054 vs.
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..67
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 27..67

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10018054.1HG10018054.1mRNA