HG10018052 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10018052
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Translation factor GUF1 homolog, chloroplastic
Location	Chr03: 29993861 .. 30002189 (+)
RNA-Seq Expression	HG10018052
Synteny	HG10018052

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGCAGAGCTTTCTTCCGCGCCTCTCTTATCCACATCCACCCAACATCCTCGTCTTTTCCAATCAAGAACACACAGCCATTTCCATTTCCATTTCCACATCCCTTCACTTCCACGTCCACTTCCCTCCCTCTCCACTTTCCCTTTTTCTTCTTCAACTGTAACAACCAGAGGCAAGGTCCTTTGTCACACTGCTGGAACGCATCTCGTCGATGCTCAATACGCTGCTCAAGCCGGTCAAAATCGACTGTTGAAGGTTCTCTCCCTTACAATGTTCACATTTTTATCCCTCTTTATTCTCTTTTTCCTCTATTGCATTTGCTTCTTCAATGCTCATTCTTTCCGCAACTATGTCGTAAAAGAGTTCGAATAATCAAATCCTTCAGCGACCATTTGTTTTAATTCGGTTATATTTGTGTGGCTTTCTGAGGTTTGAAATGCAGGTTCCTATATCGAACATCAGAAACTTCTGCATTATTGCGCACATTGATCATGGTAAATCAACTTTGGCGGATAAACTGCTTCAGATGACCGGTACCGTTCAGACGCGAGAAATGAAGGATCAATTTCTCGATAACATGGATTTGGAGAGAGAAAGAGGCATCACAATTAAACTACAGGTCAGTTTACTCATTTAGTTTCTCTTTGATGCAGTTAGTCATTTATTCAGATTCTAGGCTGCCGTGAGAACTGGCAAAATTAAGTATTTACATCAAGCTGTATTATAAGTCGGTTACTGCATGCTAATGGTAGAAGTAGAACATTTCCAGTTGAGCACGCTTTAAAATGACCACTATATGCCTCGTCGATTCCTATCACTCAGGAAATCTACTGTCCCCAAGCTAAGCTGCCAAAAAAGGAATAAAAAAACAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAATTATAATTAGATTTTTCCTGCGGAAATACATTACTCTCCCCCCTGCCAACATTGGAGAATATTCCAATTGAAGACTGTCTTCAGCCCAACAATTATTAATTGTGCTAGAAAAAAAGGTTCTTCAGATATTAAAGGTTGTGTGCACACAACTCTTGGGGTGATATTCATTCAACATAGAAATTTTTTTTGGAACTCGCATTAGCTTCTGGCTGATAAGGCCATGGTGAAGTTTGGTGGAAGAGAAGCTGGTTTGGATTTTGAAGGCAAATGGAAAATTATTGGTGATTATTATTTGAAGATTGAGAAATGGTCCAGAGATAAAGCATTCAATACCTGAAGTCATTGTTGGATGTGGAAGTTGGATTTCGGTGTCCAGTTTACTGTAACTCTTTGGAAGAGAGATGTCTTTGAGGCCATTGGAAAACATTTCGAGGGTTTGGTTAGTATTTCCACCCAAACTTTAAATCTTCTGGGCTGCACAAGAGCTTGTATTCAAGTGAAGAGGAATCTCTGTAGCTCTCCCACTGCTTGGAAGCTTACGGTTTCATGTTCTATTTCACTCCCCGATGGGGGTTCTGTTCCAGCTTGTATTGAAGTCAAGGATGCCAAGAATGGTGTTTTCTTCTCAGATTTGGAGATATTTTCTCTCTTGTTTCTCAAAGTATTGTCAATAGAGACTTATCTTTTTGTGACATTTCAAATTCCATCGATTTGAATAGGGTGGAAAAGTTAGTGGAAGATGAAGGGTTCTTGGTGATTGATGAGGCTGAAGTTAATTTCTCATCCATTTCATTAAATGATTCTCTAGGCATGATCAGATTGTCCATCCATGATCCAATCGTTCCAATTCCAACGAGAGTTATTAATTCTTGTGGTAAAAGCATATTAAATGCGGATGTAAAATCAAGTAATGTTGATTGAATCGACAAATATCTTTGCGAACAGAGAGTAAATGTATATTTCTTCATTTAACTTTAATTGAGTACCTTCTTGGAAAACTGAAGAGAACTTTTTCTATATAACTTCAGTTGAATATGGAGAACTCTGATTATTATTATTTTTAGGTACCACGCTTTCATTGAGAGAAATGAAAGAATATACAAGCACATACAAAAAAAAAGGATCCAATGAAAAAAGAGTTTGAATCCTAACTACAAAAAGGGACTCCAAGTCCAAAGATAAGACCTATAATGTAATTACAAAAAGGCCTAGTGACCGATGCCCACTAGGAGGCATTACACCTACTCACCTTCCGAACCTCCTTACACAATCTCTCCACCCCTCTAAAGATCCTATTAGTCCTCTCAAGCCAAATGTCCCACAAAATTGCAAAGAAACTAGCATGGCACTACACTTTTTTTTTTTTTTTTTTTTTTGGGAAAAGGAAAAAGTGCTTTTCATTGATAAAATGAAAAGAGTCTAATGCTCGAAAATACAAGATACCAAATAACAATAATAAAATGTAAAGGTACAAAAGTTAAACCGAAGAAATGAAAGCATTCCAATTTAAACAAATGTCCTGAATGGAATAATCAACAAAATTTTAGGATTGAGATCACCATGAAGAGGTTAGAAGATGAGTTGAGCCCAGCCGATCTGACCAATCTACAGATTTGTCATGAAAAACCCTTTGATTACGCTCGAACCAAATCTCTGATATCAAAGCCTTGACTGCATTCGACCATAGTAATTGAGATTTAGAAGATAATAATGGACCAACCAAGACTTGAGAAATATTCTCACGGAAGGAATTTTCAAAGACTCAATGGAGATTAAAGCACTTGAAAAAGATAACTGAAAAGCACCTACCCACCATGGAGCTACAATCTCTACTCGTAGCCCCACAATAACCATAAGATATCATCATCCATTAATCAAAAGAGAGAAGTCTGGTTATTAACTGACTGACCTTGAACAAACTATTATTTCTTGTAATAATTTTGAATATTTTGTAATATCAGTTACTTTTGTATGACCTTACCTGAACAAGATCTGTTTTATGGATTGTACGTATCCTTGAGTTCTAGTAGTATCAATTATTTTGGTCACGACTTCTAGTTTAGCTTGTATTGTTTGTTCTGACCAATTAATTTGACAGGCAGCTCGAATGCGTTACATGTATAAGAATGAAGCATATTGCTTGAATTTGATTGATACACCTGGTCATGTTGACTTCTCTTATGAGGTAATTTCGTGTAAGTCTTTTGATTTCTGCAATGTTTATAAGTTATAATTGCATTTGAATGACTATCTTGTTGGGGTCCAATTGTTGATAGTGTGAGGGGAAGGTGATAAGAAAACTTATATAAAATATTGTTAGAAAGACATTATCTTAAAAAGATCATTTTTTAACTAGTCATGGGATAGGAATCGTTTTATGGAAGTCTTATTAACCGAAAGAACTTGCCTAAGGCAATTACAATATCCCAGCCACAGGGGGATAAGGTGGCTCTCTCCCACCTTCAATTTGCCTATGACACCATCTTTTGCTTCTCTGGTAATGAGGATTTGTTTTGTTTAGTACAACAACAGTGGGAATGAGGGATTGAACCTTCAACCTCTGGGGAGGAAAGCCATGCGGCCCATGCCAATTACTATTGAGCTAAGCTCACTTTGGCAGTAATGAGGATTTGTTATTAATTTTGAATCACATTAGTGTAAAACCAATTTCTTGAACACAATCTTGGAGAATTCTTGAAGAGCTCTTTTTTTGTTCCTAGAACTAATACCTCTTACAACCTTGTGACCCCTATTTAAAGACTGCAAACTAGCCTTTGAAGTAACTTTAAAAAACAGAAACAACTTTAAAAAGTTACTTAAGGTAAAAACTAGAAACTTAAACTTAAGATCTTTGACAGTGGAGATGTGGCCTTCCCCAACGACCCTCTCATCCTACTGAATATGCTTCTCACTGGCCGTCCATTCAAGGATGAGAAAGCTATTATGTGGTTCTTCATCATCAAAGCCTTCTTTTGGTTCATTTGGCTTGAGAGGAATCATCGAACATTTGAAGACAAAGCTTGGATATCACTCCTTTTTTTGATCATCTATTGTACACATCTCTTTCTTGGTGTAAATTCACTCCTTTTTTTTGTGATTACAACCTCACATCTCTTATATCTCAATGGAATAGCATGATGTAATCTCTCATAGCACATTTTGCCCTTTTGTAATTTCATACAATCTATGAAGTTATGATCGAATGTTTCTCATAAGAAAAAAAAGGCAGCAGAGAAGTCTAAAAATAGAGTAAAACGGAGCATTTAAGCCTAAAACAGAGCCAAGCTGATAGATTACATCACACATTTTGGCCTTTTTTGAAGATATGTTTGGGTCAAAGATCTATAAAAGTAAATGGTATGTTATGAGGCTCAATTGTGAGGATGAGAACCTTAGTTGGTGGGCAGATGTGGATGCGAAGTTGGTTGTCTTTCTTCTTATCTAGGTCTTCCTCTTGGAAGTAACCCCAATCCTTAATCTTTTTGGAAGCATGTGGTGGATAAAAGTTCGAAAATATTAGCCTCTTGAAAAAAAACGTTTCTTCTCTAAAGTTGAAAGACTTACATTGGTCCTGTCTGTTTTGAGTGACATCCCTATTTATTATTTCTCCCTTTTTAGAGCTTTGAGTTAGAGTTGTAATATCTTAAAGAAACTTATGCACAATTTCCTTTATGAAGGGATGGATGAAGGAAAAGTAAAAGAGACACATTTGGTAAGATGGGAGATTATTGAGAGCTCGATCAACCTTGAGAGTTAGAAATTGGGAATTTACGATCTCGAACAAAGCGTTGTTAGCCAAATAACTTTGGCGTTTCCTCCTCGAGCCCAATTCTCTTTGGCATAGGATCATTGCTAGTAAACATTGTCCTCATCCTTTTGAGTGGTTGACAAGTGGGGTTAAAGGCACATACCAGAACTTATGGAAGGATATTTCTATGGTGCTTCCTTCTTTTGCTCACTTGATCCATTGTGAAGCGGGAGAGGGAAATGAAACATATTTATGGGAAGATCGGTAGGTGGGGGATAGACAATATGCTTTTTGTTTCTCCTAGTTATAATTTATTTGCTCTTAACAAAATTATTTTGTGTGACATTTTTGTTTGGTCAAGGAGCTCCTGTTCTTTCTCTTTCGGGTTTCGTTGTTCTTTATCTGATAGGGAAGCGACAAATGTGGTCTCTCTTTTGTTTTATGGTTGAGAAACACACTTTTAGGCTTGAGAAAAAGGGTCTGAGGGTATGGAGTACCAACCCTTCGGAGAGATTTTCGTGCATATCTTTTTTTTTTTTTTTTTTTTTGGTGTAGTTTGATTGACCCTTCTCCCCTAGGGTAGTTGGTTTTTTCGATGCTCAGAAGGATTAAGATTATTAGGAAAGTGAAGTTTTGTACTTGGCAAGTTTTGCATTGTCGTGGTAACACGATGGATAGACTGCAAGGAAGATGAAAAAGTTTTGTTTCCATTAAAAAAAAAAAAGACTGCAAGGAAGATGCCCTTGTTATTTGGGCCGTTTGTTGTATTCTTTGTTGGAAGGTAGAGGAAGACTTGGAGCATATTTTCTAGAGATGTGAGTTTGTGAGATTCGTTTGGGATTACTTCTTTCAGACGTTCAAATTCTTGCATGCTCGACACAGGAACGCTAGTGATATGATCGAAGAGTTTCTCATCCATTCGCCCCATCGTGAGAAGGGCTGCTTTTTATGGTTTTTTGGGGTGTGCACTATTTTATGGGTTCTTTGGGGGGAGTGGAATAGCAGGATTTTGAGGTGTTTAGAGGGTTGGAGAGAAATTCTAGTAATGTTTGGTCCCTTGTTAGATTTCATGTTTCCTTTTGAATTTTGATTTTTAAAACCTTTTGTAATTCTTCTACCGACAATATTTTGTATAGTTGGAGTCCCTTTCTTTAGTGGGATTCTTCCCTTTTTATTGTAAGACTGTTTTTTTGTATGCCTTTGTATTCTTTCATTTTTTCTCAACGAAAGTTGTTGTTTCTATAAAAAATAAAATTATAGCTATGATATTTTAACTTCATTTAACTTCCTCTTTTTTGCTAGGTTTCTCGATCTCTTGCTGCCTGTGAGGGTGCTCTCCTTGTTGTAGACGCTTCACAGGTAAATCATTCTAGATGGTTACTTTGTGTTAGCATTAGTTGATTGTTTGTCTTCCAATTTGCTACATACGTAGGAAATCTTTGTGCATTATTTGTGTGCTATTTGGCAATGTTTCTATGAACCTTAATCTTGTTTTTGTCATAGCTGAACTTATATTATCTTCTGCTTAGTTTAACTCATGCAAATCTGTGTTAGGGCGTGGAGGCACAAACACTGGCAAATGTCTATTTGGCTCTAGAGAACAACTTAGAAATTATCCCCGTAAGTTTTATCATTACTTCTCTTTCACACATTTTTATTTTTATTGTAATTTTACTATTCTTAGTGTTATAATATATATTATTATTATGTATAGTTGTCCTTTATTGTAATTGTATATTCTATAGTTTAGGGTTCTCTTGTACACCTATATATATGTGTGTGCCTCTCTAATCTAAACCACAACAAAGTATTTTTTCCCAATATTGAGCTCAGTTAGTTTAGGGCTTCCATGTATGCCTATATATGTTGAACTCTAATGTCTAAGATTCTTGAGTATTTTGTCCCACAAGAACACGGTATCGAAGCGCTACATCTTTTCCTACGGCAATTAGGGTTTTGTTACCCATTAGGTTTGGGGTTTAGAACTCTTATGTTTTCCATCTTATGTTTTGTGAGTTTGTTGTACCGTTTGTGCACCTAAACCCACTGTTCGGTTTTTAGTGTCCGACGTTGGTTTTGCCAACATCACAAGTTTGGTCAGATTTTTTCCGTCCTTTTTTCTAACCACCTAGCTTAAGAGCAAGCCTGTTCTTTGATTTTAAGATCCCCAAAATTAGGTCAACAAAGCAGTTGCACATGGGCCCTGTGTGTCACGGTCATGCTTGTCCAGGGCTTCTTGCCCATGGCCGTATGCCCATTTCATCATGATCGTATAAAGCCGACTTGGCTTTGATACCAACTATGTTTATGGTAGTTTGGTTATCGTAGTAAACTTCAAGTCAAGTTTGGAGTTGAATTTATCAAAGCTTATTTTTGGTAATGCTTTGGTGGTAATATCAACAATCTGATGGCGAGGTGGAACATAGTTTAGCTTCACTAATTGTTGACCTTCTCTAATATGAAATGACGTTCTATCTCTATTTGCTTCATTCGGTTATGATGGACAAGATTATTTTGCTATGCTGATTTCTACTTGACCATCACAAATTTTTGTTAATGAACTCCAAAGTTTTTATCTTTAGTTCTTTAAAAAGCTTTTGAATCCACATCCGTTCAGAAATTCCAAAAGCTAGAGCTCGATATTTGACTCTTGTACTACTTCTTGCTATAAGAAATATCTAGATGTAGATCGCTAACTATCATCTGTATAGAGTCCAACCATTTATGTTTGTTGACTTTGAAATAATAATCAATAATCCATGATTTGGAGTGCCTTTCATGTACCTTAAAATCCTATTCACAGCCCTAAGATGATATTTGTTTGGACTGTTCATTGCTGACTAACAATTTTAACTGAGTATGTAATGGTCTAGTATGCAACAAGTATATTAACTTTTCCACAAATCTTTGACACATGTCTTTGTCAACTGGAATTGCCTTTTCACTTAACCATCATGGGTTGACCTAGTGGTAGTAGGAACATAAAAAAAAGGCCAAAGGGCGAAGAGGTCATGGGTTCAATCCATGGTGGCCACCTACCTAGGATTTAATATCCTACGAGTTTTCTTGACACCTAAATGTTGTAGAGTCAGGCGGGTTGTCCCGTGAGATTAGTCGAGGTGCCCGTAAGCTGGCCCGAACACTCACGAATATAAATACGCCTAAGATTTTTTGCTTCCTTTGGTTAGTCTAGAATATATTTATGTTGAGAAATGAAAATACCACTTCTTAGATCTCACTTCTTCCATTCCTAGAAAGTATCTTAATCTTTCCAAGTACTTGATTTCAAATTCAGTTGCAAACATCTTTTTCATATTATTGATCCCCCTTAGATCATCTTCGGTAATGATAATATCATCTGCATTGGACAATTTCTTTTTCATCTATCAATGAAAACTTGTTTCTTGTCAAATAATAAATAGATGTGAATTATGAGCCATGCTCCTAAATACCATATACATCTCTTCCATCATCGCAACTTTTGGTTTATTTAACTTTTTGTTAATACTTTGTTGCATTTGAATGTAGTAATTTCATTGATTGGTTATTGATTTAATATGTTGTAGGTTTTAAATAAAATAGATCTTCCGGGTGCTGACCCACTTCGTGTGATGAAGGAGATTGAAGAGGTTGGTACCAAAAAAAAAAAAAAAAAGGAAAACAAAAGAAAATAA

mRNA sequence

ATGGCGGCAGAGCTTTCTTCCGCGCCTCTCTTATCCACATCCACCCAACATCCTCGTCTTTTCCAATCAAGAACACACAGCCATTTCCATTTCCATTTCCACATCCCTTCACTTCCACGTCCACTTCCCTCCCTCTCCACTTTCCCTTTTTCTTCTTCAACTGTAACAACCAGAGGCAAGGTCCTTTGTCACACTGCTGGAACGCATCTCGTCGATGCTCAATACGCTGCTCAAGCCGGTCAAAATCGACTGTTGAAGGTTCCTATATCGAACATCAGAAACTTCTGCATTATTGCGCACATTGATCATGGTAAATCAACTTTGGCGGATAAACTGCTTCAGATGACCGGTACCGTTCAGACGCGAGAAATGAAGGATCAATTTCTCGATAACATGGATTTGGAGAGAGAAAGAGGCATCACAATTAAACTACAGGCAGCTCGAATGCGTTACATGTATAAGAATGAAGCATATTGCTTGAATTTGATTGATACACCTGGTCATGTTGACTTCTCTTATGAGGTTTCTCGATCTCTTGCTGCCTGTGAGGGTGCTCTCCTTGTTGTAGACGCTTCACAGGGCGTGGAGGCACAAACACTGGCAAATGTCTATTTGGCTCTAGAGAACAACTTAGAAATTATCCCCGTTTTAAATAAAATAGATCTTCCGGGTGCTGACCCACTTCGTGTGATGAAGGAGATTGAAGAGGTTGGTACCAAAAAAAAAAAAAAAAAGGAAAACAAAAGAAAATAA

Coding sequence (CDS)

ATGGCGGCAGAGCTTTCTTCCGCGCCTCTCTTATCCACATCCACCCAACATCCTCGTCTTTTCCAATCAAGAACACACAGCCATTTCCATTTCCATTTCCACATCCCTTCACTTCCACGTCCACTTCCCTCCCTCTCCACTTTCCCTTTTTCTTCTTCAACTGTAACAACCAGAGGCAAGGTCCTTTGTCACACTGCTGGAACGCATCTCGTCGATGCTCAATACGCTGCTCAAGCCGGTCAAAATCGACTGTTGAAGGTTCCTATATCGAACATCAGAAACTTCTGCATTATTGCGCACATTGATCATGGTAAATCAACTTTGGCGGATAAACTGCTTCAGATGACCGGTACCGTTCAGACGCGAGAAATGAAGGATCAATTTCTCGATAACATGGATTTGGAGAGAGAAAGAGGCATCACAATTAAACTACAGGCAGCTCGAATGCGTTACATGTATAAGAATGAAGCATATTGCTTGAATTTGATTGATACACCTGGTCATGTTGACTTCTCTTATGAGGTTTCTCGATCTCTTGCTGCCTGTGAGGGTGCTCTCCTTGTTGTAGACGCTTCACAGGGCGTGGAGGCACAAACACTGGCAAATGTCTATTTGGCTCTAGAGAACAACTTAGAAATTATCCCCGTTTTAAATAAAATAGATCTTCCGGGTGCTGACCCACTTCGTGTGATGAAGGAGATTGAAGAGGTTGGTACCAAAAAAAAAAAAAAAAAGGAAAACAAAAGAAAATAA

Protein sequence

MAAELSSAPLLSTSTQHPRLFQSRTHSHFHFHFHIPSLPRPLPSLSTFPFSSSTVTTRGKVLCHTAGTHLVDAQYAAQAGQNRLLKVPISNIRNFCIIAHIDHGKSTLADKLLQMTGTVQTREMKDQFLDNMDLERERGITIKLQAARMRYMYKNEAYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGADPLRVMKEIEEVGTKKKKKKENKRK

Homology

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BLAST of HG10018052 vs. NCBI nr
Match: XP_038889419.1 (translation factor GUF1 homolog, chloroplastic [Benincasa hispida])

HSP 1 Score: 428.7 bits (1101), Expect = 3.4e-116
Identity = 223/237 (94.09%), Postives = 228/237 (96.20%), Query Frame = 0


Query: 1   MAAELSSAPLLSTSTQHPRLFQSRTHSHFHFHFHIPSLPRPLPSLSTFPFSSSTVTTRGK 60
           MAAELSSAPLLSTSTQH RLFQSRT++HFHFHF  PSLP P PSLSTFPFSSST TTRGK
Sbjct: 1   MAAELSSAPLLSTSTQHRRLFQSRTNTHFHFHF--PSLPLP-PSLSTFPFSSSTATTRGK 60

Query: 61  VLCHTAGTHLVDAQYAAQAGQNRLLKVPISNIRNFCIIAHIDHGKSTLADKLLQMTGTVQ 120
           VLC TAGTHL DAQYAAQAGQ+RLLKVP S+IRNFCIIAHIDHGKSTLADKLLQMTGTVQ
Sbjct: 61  VLCQTAGTHLFDAQYAAQAGQDRLLKVPTSHIRNFCIIAHIDHGKSTLADKLLQMTGTVQ 120

Query: 121 TREMKDQFLDNMDLERERGITIKLQAARMRYMYKNEAYCLNLIDTPGHVDFSYEVSRSLA 180
           TREMKDQFLDNMDLERERGITIKLQAARMRYMYKNEAYCLNLIDTPGHVDFSYEVSRSLA
Sbjct: 121 TREMKDQFLDNMDLERERGITIKLQAARMRYMYKNEAYCLNLIDTPGHVDFSYEVSRSLA 180

Query: 181 ACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGADPLRVMKEIEEV 238
           ACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGADPLRVMKEIEE+
Sbjct: 181 ACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGADPLRVMKEIEEI 234

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BLAST of HG10018052 vs. NCBI nr
Match: XP_031740278.1 (translation factor GUF1 homolog, chloroplastic isoform X4 [Cucumis sativus])

HSP 1 Score: 400.6 bits (1028), Expect = 1.0e-107
Identity = 211/237 (89.03%), Postives = 218/237 (91.98%), Query Frame = 0


Query: 1   MAAELSSAPLLSTSTQHPRLFQSRTHSHFHFHFHIPSLPRPLPSLSTFPFSSSTVTTRGK 60
           MA ELSSAPLLST TQH R FQSRT+ HFHF    PSLP PL SL+TFPFSSST TTRGK
Sbjct: 1   MAVELSSAPLLSTCTQHLRPFQSRTNIHFHF----PSLPIPL-SLTTFPFSSSTATTRGK 60

Query: 61  VLCHTAGTHLVDAQYAAQAGQNRLLKVPISNIRNFCIIAHIDHGKSTLADKLLQMTGTVQ 120
           VLC TAG H  DAQ A +AGQNRLLKVPIS+IRNF IIAHIDHGKSTLADKLLQMTGTVQ
Sbjct: 61  VLCQTAGAHFFDAQNAVEAGQNRLLKVPISHIRNFSIIAHIDHGKSTLADKLLQMTGTVQ 120

Query: 121 TREMKDQFLDNMDLERERGITIKLQAARMRYMYKNEAYCLNLIDTPGHVDFSYEVSRSLA 180
           TREMKDQFLDNMDLERERGITIKLQAARMRYMYKNEAYCLNLIDTPGHVDFSYEVSRSLA
Sbjct: 121 TREMKDQFLDNMDLERERGITIKLQAARMRYMYKNEAYCLNLIDTPGHVDFSYEVSRSLA 180

Query: 181 ACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGADPLRVMKEIEEV 238
           ACEGALLVVDASQGVEAQTLANVYLAL+NNLEIIPVLNKIDLPGADPLRV+KEIEE+
Sbjct: 181 ACEGALLVVDASQGVEAQTLANVYLALDNNLEIIPVLNKIDLPGADPLRVIKEIEEI 232

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BLAST of HG10018052 vs. NCBI nr
Match: XP_031740276.1 (translation factor GUF1 homolog, chloroplastic isoform X2 [Cucumis sativus])

HSP 1 Score: 400.6 bits (1028), Expect = 1.0e-107
Identity = 211/237 (89.03%), Postives = 218/237 (91.98%), Query Frame = 0


Query: 1   MAAELSSAPLLSTSTQHPRLFQSRTHSHFHFHFHIPSLPRPLPSLSTFPFSSSTVTTRGK 60
           MA ELSSAPLLST TQH R FQSRT+ HFHF    PSLP PL SL+TFPFSSST TTRGK
Sbjct: 1   MAVELSSAPLLSTCTQHLRPFQSRTNIHFHF----PSLPIPL-SLTTFPFSSSTATTRGK 60

Query: 61  VLCHTAGTHLVDAQYAAQAGQNRLLKVPISNIRNFCIIAHIDHGKSTLADKLLQMTGTVQ 120
           VLC TAG H  DAQ A +AGQNRLLKVPIS+IRNF IIAHIDHGKSTLADKLLQMTGTVQ
Sbjct: 61  VLCQTAGAHFFDAQNAVEAGQNRLLKVPISHIRNFSIIAHIDHGKSTLADKLLQMTGTVQ 120

Query: 121 TREMKDQFLDNMDLERERGITIKLQAARMRYMYKNEAYCLNLIDTPGHVDFSYEVSRSLA 180
           TREMKDQFLDNMDLERERGITIKLQAARMRYMYKNEAYCLNLIDTPGHVDFSYEVSRSLA
Sbjct: 121 TREMKDQFLDNMDLERERGITIKLQAARMRYMYKNEAYCLNLIDTPGHVDFSYEVSRSLA 180

Query: 181 ACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGADPLRVMKEIEEV 238
           ACEGALLVVDASQGVEAQTLANVYLAL+NNLEIIPVLNKIDLPGADPLRV+KEIEE+
Sbjct: 181 ACEGALLVVDASQGVEAQTLANVYLALDNNLEIIPVLNKIDLPGADPLRVIKEIEEI 232

[Close]

BLAST of HG10018052 vs. NCBI nr
Match: XP_031740277.1 (translation factor GUF1 homolog, chloroplastic isoform X3 [Cucumis sativus])

HSP 1 Score: 400.6 bits (1028), Expect = 1.0e-107
Identity = 211/237 (89.03%), Postives = 218/237 (91.98%), Query Frame = 0


Query: 1   MAAELSSAPLLSTSTQHPRLFQSRTHSHFHFHFHIPSLPRPLPSLSTFPFSSSTVTTRGK 60
           MA ELSSAPLLST TQH R FQSRT+ HFHF    PSLP PL SL+TFPFSSST TTRGK
Sbjct: 1   MAVELSSAPLLSTCTQHLRPFQSRTNIHFHF----PSLPIPL-SLTTFPFSSSTATTRGK 60

Query: 61  VLCHTAGTHLVDAQYAAQAGQNRLLKVPISNIRNFCIIAHIDHGKSTLADKLLQMTGTVQ 120
           VLC TAG H  DAQ A +AGQNRLLKVPIS+IRNF IIAHIDHGKSTLADKLLQMTGTVQ
Sbjct: 61  VLCQTAGAHFFDAQNAVEAGQNRLLKVPISHIRNFSIIAHIDHGKSTLADKLLQMTGTVQ 120

Query: 121 TREMKDQFLDNMDLERERGITIKLQAARMRYMYKNEAYCLNLIDTPGHVDFSYEVSRSLA 180
           TREMKDQFLDNMDLERERGITIKLQAARMRYMYKNEAYCLNLIDTPGHVDFSYEVSRSLA
Sbjct: 121 TREMKDQFLDNMDLERERGITIKLQAARMRYMYKNEAYCLNLIDTPGHVDFSYEVSRSLA 180

Query: 181 ACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGADPLRVMKEIEEV 238
           ACEGALLVVDASQGVEAQTLANVYLAL+NNLEIIPVLNKIDLPGADPLRV+KEIEE+
Sbjct: 181 ACEGALLVVDASQGVEAQTLANVYLALDNNLEIIPVLNKIDLPGADPLRVIKEIEEI 232

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BLAST of HG10018052 vs. NCBI nr
Match: XP_011653860.1 (translation factor GUF1 homolog, chloroplastic isoform X1 [Cucumis sativus] >KGN54948.2 hypothetical protein Csa_012600 [Cucumis sativus])

HSP 1 Score: 400.6 bits (1028), Expect = 1.0e-107
Identity = 211/237 (89.03%), Postives = 218/237 (91.98%), Query Frame = 0


Query: 1   MAAELSSAPLLSTSTQHPRLFQSRTHSHFHFHFHIPSLPRPLPSLSTFPFSSSTVTTRGK 60
           MA ELSSAPLLST TQH R FQSRT+ HFHF    PSLP PL SL+TFPFSSST TTRGK
Sbjct: 1   MAVELSSAPLLSTCTQHLRPFQSRTNIHFHF----PSLPIPL-SLTTFPFSSSTATTRGK 60

Query: 61  VLCHTAGTHLVDAQYAAQAGQNRLLKVPISNIRNFCIIAHIDHGKSTLADKLLQMTGTVQ 120
           VLC TAG H  DAQ A +AGQNRLLKVPIS+IRNF IIAHIDHGKSTLADKLLQMTGTVQ
Sbjct: 61  VLCQTAGAHFFDAQNAVEAGQNRLLKVPISHIRNFSIIAHIDHGKSTLADKLLQMTGTVQ 120

Query: 121 TREMKDQFLDNMDLERERGITIKLQAARMRYMYKNEAYCLNLIDTPGHVDFSYEVSRSLA 180
           TREMKDQFLDNMDLERERGITIKLQAARMRYMYKNEAYCLNLIDTPGHVDFSYEVSRSLA
Sbjct: 121 TREMKDQFLDNMDLERERGITIKLQAARMRYMYKNEAYCLNLIDTPGHVDFSYEVSRSLA 180

Query: 181 ACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGADPLRVMKEIEEV 238
           ACEGALLVVDASQGVEAQTLANVYLAL+NNLEIIPVLNKIDLPGADPLRV+KEIEE+
Sbjct: 181 ACEGALLVVDASQGVEAQTLANVYLALDNNLEIIPVLNKIDLPGADPLRVIKEIEEI 232

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BLAST of HG10018052 vs. ExPASy Swiss-Prot
Match: A5B4D2 (Translation factor GUF1 homolog, chloroplastic OS=Vitis vinifera OX=29760 GN=VITISV_013255 PE=3 SV=1)

HSP 1 Score: 300.8 bits (769), Expect = 1.4e-80
Identity = 172/242 (71.07%), Postives = 185/242 (76.45%), Query Frame = 0


Query: 1   MAAELSS-APLLSTSTQHPRLFQSRTHSHFHFHFHIPSLPRPL-PSLSTFPFSSSTVTTR 60
           MAA+++S A L+S    H            H H   P    P  P LST   S       
Sbjct: 1   MAAKINSLAALVSLQASH------------HHHXSTPFYFSPFSPHLSTTLTSRRRSLRS 60

Query: 61  GKVLCHTAGTHL---VDAQYAAQAGQNRLLKVPISNIRNFCIIAHIDHGKSTLADKLLQM 120
             V   TAGT      D   AA +GQ+RLLKVPISNIRNFCIIAHIDHGKSTLADKLLQM
Sbjct: 61  AVVAQSTAGTQSKAPSDVDLAAVSGQDRLLKVPISNIRNFCIIAHIDHGKSTLADKLLQM 120

Query: 121 TGTVQTREMKDQFLDNMDLERERGITIKLQAARMRYMYKNEAYCLNLIDTPGHVDFSYEV 180
           TGTVQ REMK+QFLDNMDLERERGITIKLQAARMRY+++NE YCLNLIDTPGHVDFSYEV
Sbjct: 121 TGTVQKREMKEQFLDNMDLERERGITIKLQAARMRYVFENEPYCLNLIDTPGHVDFSYEV 180

Query: 181 SRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGADPLRVMKEIE 238
           SRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGA+P+RV +EIE
Sbjct: 181 SRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGAEPVRVSQEIE 230

[Close]

BLAST of HG10018052 vs. ExPASy Swiss-Prot
Match: B9GHA6 (Translation factor GUF1 homolog, chloroplastic OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_815670 PE=3 SV=2)

HSP 1 Score: 299.7 bits (766), Expect = 3.1e-80
Identity = 155/181 (85.64%), Postives = 162/181 (89.50%), Query Frame = 0


Query: 57  TRGKVLCHTAGTHLVDAQYAAQAGQNRLLKVPISNIRNFCIIAHIDHGKSTLADKLLQMT 116
           TR  + C T       A +AA AGQ+RL KVPI NIRNFCIIAHIDHGKSTLADKLLQMT
Sbjct: 48  TRLHLRCQTTTGTPSAADFAAAAGQDRLRKVPIKNIRNFCIIAHIDHGKSTLADKLLQMT 107

Query: 117 GTVQTREMKDQFLDNMDLERERGITIKLQAARMRYMYKNEAYCLNLIDTPGHVDFSYEVS 176
           GTVQ REMK+QFLDNMDLERERGITIKLQAARMRY+Y+NE YCLNLIDTPGHVDFSYEVS
Sbjct: 108 GTVQKREMKEQFLDNMDLERERGITIKLQAARMRYVYENEGYCLNLIDTPGHVDFSYEVS 167

Query: 177 RSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGADPLRVMKEIEE 236
           RSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGA+P RV KEIEE
Sbjct: 168 RSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGAEPDRVCKEIEE 227

Query: 237 V 238
           V
Sbjct: 228 V 228

[Close]

BLAST of HG10018052 vs. ExPASy Swiss-Prot
Match: B9RHQ5 (Translation factor GUF1 homolog, chloroplastic OS=Ricinus communis OX=3988 GN=RCOM_1767360 PE=3 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 3.1e-80
Identity = 166/246 (67.48%), Postives = 191/246 (77.64%), Query Frame = 0


Query: 1   MAAELSSAP--LLSTSTQHPRLFQSRTHSHFHFHFHIPSLPRPLPSLSTFPFSSSTVTTR 60
           MA +LSS+   LLS + + P  + +          H+ +             S + V +R
Sbjct: 1   MATDLSSSSTLLLSRNCKTPPFYHTTNSLSLSKTHHLYA-------------SRNAVVSR 60

Query: 61  GKVLCHTAG-------THLVDAQYAAQAGQNRLLKVPISNIRNFCIIAHIDHGKSTLADK 120
            ++LC T G       + + D Q+AAQ GQ+RL KVPISNIRNFCIIAHIDHGKSTLADK
Sbjct: 61  LRLLCQTTGSTQSTPTSGVSDLQFAAQVGQHRLSKVPISNIRNFCIIAHIDHGKSTLADK 120

Query: 121 LLQMTGTVQTREMKDQFLDNMDLERERGITIKLQAARMRYMYKNEAYCLNLIDTPGHVDF 180
           LLQ+TGTVQ REMK+QFLDNMDLERERGITIKLQAARMRY+Y+N+ YCLNLIDTPGHVDF
Sbjct: 121 LLQVTGTVQQREMKEQFLDNMDLERERGITIKLQAARMRYVYENKPYCLNLIDTPGHVDF 180

Query: 181 SYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGADPLRVM 238
           SYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPG++P RV+
Sbjct: 181 SYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGSEPDRVI 233

[Close]

BLAST of HG10018052 vs. ExPASy Swiss-Prot
Match: Q9FNM5 (Translation factor GUF1 homolog, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g08650 PE=1 SV=2)

HSP 1 Score: 287.7 bits (735), Expect = 1.2e-76
Identity = 165/246 (67.07%), Postives = 188/246 (76.42%), Query Frame = 0


Query: 2   AAELSSAP---LLSTSTQHPRLFQSRTHSHFHFHFHIPSLPRPLPSLSTFPFSSSTVTTR 61
           A +LSS P   L  TST  P L                   R L S+S   F   +   +
Sbjct: 6   AMDLSSPPTFFLSGTSTSSPSL-------------------RRLSSISVSGFRRHS-NRK 65

Query: 62  GKVLCH-TAGTH------LVDAQYAAQAGQNRLLKVPISNIRNFCIIAHIDHGKSTLADK 121
            ++LC  TAGT       +  ++ AA++GQ+RLLKVPISNIRNF IIAHIDHGKSTLADK
Sbjct: 66  LQILCQATAGTEPQSGLSVSGSKLAARSGQDRLLKVPISNIRNFSIIAHIDHGKSTLADK 125

Query: 122 LLQMTGTVQTREMKDQFLDNMDLERERGITIKLQAARMRYMYKNEAYCLNLIDTPGHVDF 181
           LLQ+TGTVQ R+MK+QFLDNMDLERERGITIKLQAARMRY+Y++  +CLNLIDTPGHVDF
Sbjct: 126 LLQVTGTVQNRDMKEQFLDNMDLERERGITIKLQAARMRYVYEDTPFCLNLIDTPGHVDF 185

Query: 182 SYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGADPLRVM 238
           SYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGA+P +V+
Sbjct: 186 SYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGAEPEKVL 231

[Close]

BLAST of HG10018052 vs. ExPASy Swiss-Prot
Match: B9F2U5 (Translation factor GUF1 homolog, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0157700 PE=3 SV=1)

HSP 1 Score: 283.5 bits (724), Expect = 2.3e-75
Identity = 151/197 (76.65%), Postives = 164/197 (83.25%), Query Frame = 0


Query: 41  PLPSLSTFPFSSSTVTTRGKVLCHTAGTHLVDAQYAAQAGQNRLLKVPISNIRNFCIIAH 100
           PLPS    P + S    RG+V+C  A            AGQ+RL KVP+SNIRNF IIAH
Sbjct: 29  PLPSAPPRPRALS-AAPRGRVVCPAAPAS--SPASTTDAGQDRLQKVPVSNIRNFSIIAH 88

Query: 101 IDHGKSTLADKLLQMTGTVQTREMKDQFLDNMDLERERGITIKLQAARMRYMYKNEAYCL 160
           IDHGKSTLADKLL++TGTVQ REMK QFLDNMDLERERGITIKLQAARMRY+  +E YCL
Sbjct: 89  IDHGKSTLADKLLELTGTVQKREMKQQFLDNMDLERERGITIKLQAARMRYIMNDEPYCL 148

Query: 161 NLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKI 220
           NLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALEN+LEIIPVLNKI
Sbjct: 149 NLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALENDLEIIPVLNKI 208

Query: 221 DLPGADPLRVMKEIEEV 238
           DLPGA+P RV +EIEE+
Sbjct: 209 DLPGAEPDRVAQEIEEI 222

[Close]

BLAST of HG10018052 vs. ExPASy TrEMBL
Match: A0A1S3BMN9 (Translation factor GUF1 homolog, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103491317 PE=3 SV=1)

HSP 1 Score: 399.4 bits (1025), Expect = 1.1e-107
Identity = 211/237 (89.03%), Postives = 218/237 (91.98%), Query Frame = 0


Query: 1   MAAELSSAPLLSTSTQHPRLFQSRTHSHFHFHFHIPSLPRPLPSLSTFPFSSSTVTTRGK 60
           MAA+LS APLLST TQH R FQSRT+ HFHF    PSLP PL SLSTFPFSSST TTRGK
Sbjct: 1   MAAQLSFAPLLSTCTQHLRPFQSRTNIHFHF----PSLPIPL-SLSTFPFSSSTATTRGK 60

Query: 61  VLCHTAGTHLVDAQYAAQAGQNRLLKVPISNIRNFCIIAHIDHGKSTLADKLLQMTGTVQ 120
           VLC TAG H  DAQ A +AGQ+RLLKVPIS+IRNF IIAHIDHGKSTLADKLLQMTGTVQ
Sbjct: 61  VLCQTAGAHFFDAQNAVEAGQDRLLKVPISHIRNFSIIAHIDHGKSTLADKLLQMTGTVQ 120

Query: 121 TREMKDQFLDNMDLERERGITIKLQAARMRYMYKNEAYCLNLIDTPGHVDFSYEVSRSLA 180
           TREMKDQFLDNMDLERERGITIKLQAARMRYMYKNEAYCLNLIDTPGHVDFSYEVSRSLA
Sbjct: 121 TREMKDQFLDNMDLERERGITIKLQAARMRYMYKNEAYCLNLIDTPGHVDFSYEVSRSLA 180

Query: 181 ACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGADPLRVMKEIEEV 238
           ACEGALLVVDASQGVEAQTLANVYLAL+NNLEIIPVLNKIDLPGADPLRVMKEIEE+
Sbjct: 181 ACEGALLVVDASQGVEAQTLANVYLALDNNLEIIPVLNKIDLPGADPLRVMKEIEEI 232

[Close]

BLAST of HG10018052 vs. ExPASy TrEMBL
Match: A0A6J1HRW4 (Translation factor GUF1 homolog, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111466184 PE=3 SV=1)

HSP 1 Score: 381.3 bits (978), Expect = 3.0e-102
Identity = 207/239 (86.61%), Postives = 213/239 (89.12%), Query Frame = 0


Query: 1   MAAELSSAPLLSTSTQHPRLFQSRTHSHFHFHFHIPSLPRPL-PSLST-FPFSSSTVTTR 60
           MAAE S APLLST TQH RL QSR  +     FH P+LP PL PS ST    SSST TTR
Sbjct: 1   MAAEFSFAPLLSTCTQHRRLLQSRRST----LFHCPTLPLPLSPSPSTSSSSSSSTPTTR 60

Query: 61  GKVLCHTAGTHLVDAQYAAQAGQNRLLKVPISNIRNFCIIAHIDHGKSTLADKLLQMTGT 120
           GKVLC TAGTHL DA+ AA+AGQNRLLKVPIS+IRNFCIIAHIDHGKSTLADKLLQMTGT
Sbjct: 61  GKVLCQTAGTHLFDAKCAAEAGQNRLLKVPISHIRNFCIIAHIDHGKSTLADKLLQMTGT 120

Query: 121 VQTREMKDQFLDNMDLERERGITIKLQAARMRYMYKNEAYCLNLIDTPGHVDFSYEVSRS 180
           VQTREMKDQFLDNMDLERERGITIKLQAARMRYMYKNEAYCLNLIDTPGHVDFSYEVSRS
Sbjct: 121 VQTREMKDQFLDNMDLERERGITIKLQAARMRYMYKNEAYCLNLIDTPGHVDFSYEVSRS 180

Query: 181 LAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGADPLRVMKEIEEV 238
           LAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGADPLRV  EIEE+
Sbjct: 181 LAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGADPLRVTHEIEEI 235

[Close]

BLAST of HG10018052 vs. ExPASy TrEMBL
Match: A0A6J1EAZ6 (Translation factor GUF1 homolog, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111432406 PE=3 SV=1)

HSP 1 Score: 380.6 bits (976), Expect = 5.2e-102
Identity = 205/239 (85.77%), Postives = 216/239 (90.38%), Query Frame = 0


Query: 1   MAAELSSAPLLSTSTQHPRLFQSRTHSHFHFHFHIPSLPRPL-PSLST-FPFSSSTVTTR 60
           MAAELS APLLST TQH RL QSR  +     FH P+LP PL PSLST    SSST T+R
Sbjct: 1   MAAELSFAPLLSTCTQHRRLLQSRRST----LFHCPTLPLPLSPSLSTSSSSSSSTATSR 60

Query: 61  GKVLCHTAGTHLVDAQYAAQAGQNRLLKVPISNIRNFCIIAHIDHGKSTLADKLLQMTGT 120
           GKVLC TAGTHL DA+ AA+AGQ+RLLKVPIS+IRNFCIIAHIDHGKSTLADKLLQMTGT
Sbjct: 61  GKVLCQTAGTHLFDAKCAAEAGQDRLLKVPISHIRNFCIIAHIDHGKSTLADKLLQMTGT 120

Query: 121 VQTREMKDQFLDNMDLERERGITIKLQAARMRYMYKNEAYCLNLIDTPGHVDFSYEVSRS 180
           VQTREMKDQFLDNMDLERERGITIKLQAARMRY+Y+NEAYCLNLIDTPGHVDFSYEVSRS
Sbjct: 121 VQTREMKDQFLDNMDLERERGITIKLQAARMRYVYENEAYCLNLIDTPGHVDFSYEVSRS 180

Query: 181 LAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGADPLRVMKEIEEV 238
           LAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGADPLRV +EIEE+
Sbjct: 181 LAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGADPLRVTQEIEEI 235

[Close]

BLAST of HG10018052 vs. ExPASy TrEMBL
Match: A0A0A0L295 (Tr-type G domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G437520 PE=4 SV=1)

HSP 1 Score: 364.4 bits (934), Expect = 3.8e-97
Identity = 194/225 (86.22%), Postives = 201/225 (89.33%), Query Frame = 0


Query: 1   MAAELSSAPLLSTSTQHPRLFQSRTHSHFHFHFHIPSLPRPLPSLSTFPFSSSTVTTRGK 60
           MA ELSSAPLLST TQH R FQSRT+ HFHF    PSLP PL SL+TFPFSSST TTRGK
Sbjct: 1   MAVELSSAPLLSTCTQHLRPFQSRTNIHFHF----PSLPIPL-SLTTFPFSSSTATTRGK 60

Query: 61  VLCHTAGTHLVDAQYAAQAGQNRLLKVPISNIRNFCIIAHIDHGKSTLADKLLQMTGTVQ 120
           VLC TAG H  DAQ A +AGQNRLLKVPIS+IRNF IIAHIDHGKSTLADKLLQMTGTVQ
Sbjct: 61  VLCQTAGAHFFDAQNAVEAGQNRLLKVPISHIRNFSIIAHIDHGKSTLADKLLQMTGTVQ 120

Query: 121 TREMKDQFLDNMDLERERGITIKLQAARMRYMYKNEAYCLNLIDTPGHVDFSYEVSRSLA 180
           TREMKDQFLDNMDLERERGITIKLQAARMRYMYKNEAYCLNLIDTPGHVDFSYEVSRSLA
Sbjct: 121 TREMKDQFLDNMDLERERGITIKLQAARMRYMYKNEAYCLNLIDTPGHVDFSYEVSRSLA 180

Query: 181 ACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKID-LPG 225
           ACEGALLVVDASQGVEAQTLANVYLAL+NNLEIIP+   I  +PG
Sbjct: 181 ACEGALLVVDASQGVEAQTLANVYLALDNNLEIIPLFTSISGIPG 220

[Close]

BLAST of HG10018052 vs. ExPASy TrEMBL
Match: A0A6J1DVN5 (Translation factor GUF1 homolog, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111024873 PE=3 SV=1)

HSP 1 Score: 363.6 bits (932), Expect = 6.5e-97
Identity = 201/240 (83.75%), Postives = 207/240 (86.25%), Query Frame = 0


Query: 1   MAAELSSAPLLSTSTQHPRLFQSRTHSHFHFHFHIPSLPRPLPSLSTFPFSSSTVTTRGK 60
           MAAEL  AP LST  QH R  QSR +S     FH+P+LP P    S   FSSST TTR +
Sbjct: 1   MAAELCLAPPLSTCAQHRRPLQSRRNS----LFHLPALPLP---FSPLLFSSSTTTTRTR 60

Query: 61  ---VLCHTAGTHLVDAQYAAQAGQNRLLKVPISNIRNFCIIAHIDHGKSTLADKLLQMTG 120
              VLC TA T L DA+ AAQAGQNRLLKVPIS+IRNF IIAHIDHGKSTLADKLLQMTG
Sbjct: 61  GRVVLCQTAQTPLFDAERAAQAGQNRLLKVPISHIRNFSIIAHIDHGKSTLADKLLQMTG 120

Query: 121 TVQTREMKDQFLDNMDLERERGITIKLQAARMRYMYKNEAYCLNLIDTPGHVDFSYEVSR 180
           TVQTREMKDQFLDNMDLERERGITIKLQAARMRYMYKNEAYCLNLIDTPGHVDFSYEVSR
Sbjct: 121 TVQTREMKDQFLDNMDLERERGITIKLQAARMRYMYKNEAYCLNLIDTPGHVDFSYEVSR 180

Query: 181 SLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGADPLRVMKEIEEV 238
           SLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGADPLRVMKEIEEV
Sbjct: 181 SLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGADPLRVMKEIEEV 233

[Close]

BLAST of HG10018052 vs. TAIR 10
Match: AT5G08650.1 (Small GTP-binding protein )

HSP 1 Score: 287.7 bits (735), Expect = 8.8e-78
Identity = 165/246 (67.07%), Postives = 188/246 (76.42%), Query Frame = 0


Query: 2   AAELSSAP---LLSTSTQHPRLFQSRTHSHFHFHFHIPSLPRPLPSLSTFPFSSSTVTTR 61
           A +LSS P   L  TST  P L                   R L S+S   F   +   +
Sbjct: 6   AMDLSSPPTFFLSGTSTSSPSL-------------------RRLSSISVSGFRRHS-NRK 65

Query: 62  GKVLCH-TAGTH------LVDAQYAAQAGQNRLLKVPISNIRNFCIIAHIDHGKSTLADK 121
            ++LC  TAGT       +  ++ AA++GQ+RLLKVPISNIRNF IIAHIDHGKSTLADK
Sbjct: 66  LQILCQATAGTEPQSGLSVSGSKLAARSGQDRLLKVPISNIRNFSIIAHIDHGKSTLADK 125

Query: 122 LLQMTGTVQTREMKDQFLDNMDLERERGITIKLQAARMRYMYKNEAYCLNLIDTPGHVDF 181
           LLQ+TGTVQ R+MK+QFLDNMDLERERGITIKLQAARMRY+Y++  +CLNLIDTPGHVDF
Sbjct: 126 LLQVTGTVQNRDMKEQFLDNMDLERERGITIKLQAARMRYVYEDTPFCLNLIDTPGHVDF 185

Query: 182 SYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGADPLRVM 238
           SYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGA+P +V+
Sbjct: 186 SYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGAEPEKVL 231

[Close]

BLAST of HG10018052 vs. TAIR 10
Match: AT5G39900.1 (Small GTP-binding protein )

HSP 1 Score: 196.4 bits (498), Expect = 2.7e-50
Identity = 101/171 (59.06%), Postives = 128/171 (74.85%), Query Frame = 0


Query: 72  DAQYAAQAGQNRLLKVPISNIRNFCIIAHIDHGKSTLADKLLQMTGTVQTREMKDQFLDN 131
           D++ +++     L K P   IRNF IIAHIDHGKSTLAD+L+++TGT++    + Q+LD 
Sbjct: 46  DSRQSSKEPTIDLTKFPSEKIRNFSIIAHIDHGKSTLADRLMELTGTIKKGHGQPQYLDK 105

Query: 132 MDLERERGITIKLQAARMRYMYKNE-----AYCLNLIDTPGHVDFSYEVSRSLAACEGAL 191
           + +ERERGIT+K Q A M Y  K E      Y LNLIDTPGHVDFSYEVSRSL+AC+GAL
Sbjct: 106 LQVERERGITVKAQTATMFYENKVEDQEASGYLLNLIDTPGHVDFSYEVSRSLSACQGAL 165

Query: 192 LVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGADPLRVMKEIEEV 238
           LVVDA+QGV+AQT+AN YLA E NL I+PV+NKID P ADP RV  +++ +
Sbjct: 166 LVVDAAQGVQAQTVANFYLAFEANLTIVPVINKIDQPTADPERVKAQLKSM 216

[Close]

BLAST of HG10018052 vs. TAIR 10
Match: AT5G13650.1 (elongation factor family protein )

HSP 1 Score: 108.6 bits (270), Expect = 7.3e-24
Identity = 64/148 (43.24%), Postives = 89/148 (60.14%), Query Frame = 0


Query: 91  NIRNFCIIAHIDHGKSTLADKLLQMTGTVQTRE-MKDQFLDNMDLERERGITIKLQAARM 150
           N+RN  I+AH+DHGK+TL D +L+     +  + M+++ +D+ DLERERGITI   +   
Sbjct: 81  NVRNIAIVAHVDHGKTTLVDSMLRQAKVFRDNQVMQERIMDSNDLERERGITI--LSKNT 140

Query: 151 RYMYKNEAYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALEN 210
              YKN    +N+IDTPGH DF  EV R L   +G LLVVD+ +G   QT   +  ALE 
Sbjct: 141 SITYKNTK--VNIIDTPGHSDFGGEVERVLNMVDGVLLVVDSVEGPMPQTRFVLKKALEF 200

Query: 211 NLEIIPVLNKIDLPGADPLRVMKEIEEV 238
              ++ V+NKID P A P  V+    E+
Sbjct: 201 GHAVVVVVNKIDRPSARPEFVVNSTFEL 224

[Close]

BLAST of HG10018052 vs. TAIR 10
Match: AT5G13650.2 (elongation factor family protein )

HSP 1 Score: 108.6 bits (270), Expect = 7.3e-24
Identity = 64/148 (43.24%), Postives = 89/148 (60.14%), Query Frame = 0


Query: 91  NIRNFCIIAHIDHGKSTLADKLLQMTGTVQTRE-MKDQFLDNMDLERERGITIKLQAARM 150
           N+RN  I+AH+DHGK+TL D +L+     +  + M+++ +D+ DLERERGITI   +   
Sbjct: 82  NVRNIAIVAHVDHGKTTLVDSMLRQAKVFRDNQVMQERIMDSNDLERERGITI--LSKNT 141

Query: 151 RYMYKNEAYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALEN 210
              YKN    +N+IDTPGH DF  EV R L   +G LLVVD+ +G   QT   +  ALE 
Sbjct: 142 SITYKNTK--VNIIDTPGHSDFGGEVERVLNMVDGVLLVVDSVEGPMPQTRFVLKKALEF 201

Query: 211 NLEIIPVLNKIDLPGADPLRVMKEIEEV 238
              ++ V+NKID P A P  V+    E+
Sbjct: 202 GHAVVVVVNKIDRPSARPEFVVNSTFEL 225

[Close]

BLAST of HG10018052 vs. TAIR 10
Match: AT2G31060.2 (elongation factor family protein )

HSP 1 Score: 105.1 bits (261), Expect = 8.1e-23
Identity = 61/134 (45.52%), Postives = 85/134 (63.43%), Query Frame = 0


Query: 90  SNIRNFCIIAHIDHGKSTLADKLLQMTGTVQTREMKDQFLDNMDLERERGITIKLQAARM 149
           + +RN  +IAH+DHGK+TL D+LL+  G     E   + +D+++LERERGITI  +   +
Sbjct: 57  NRLRNVAVIAHVDHGKTTLMDRLLRQCGADIPHE---RAMDSINLERERGITISSKVTSI 116

Query: 150 RYMYKNEAYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALEN 209
            +   NE   LN++DTPGH DF  EV R +   EGA+LVVDA +G  AQT   +  AL+ 
Sbjct: 117 -FWKDNE---LNMVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPLAQTKFVLAKALKY 176

Query: 210 NLEIIPVLNKIDLP 224
            L  I +LNK+D P
Sbjct: 177 GLRPILLLNKVDRP 183

The following BLAST results are available for this feature:

BLAST of HG10018052 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038889419.1	3.4e-116	94.09	translation factor GUF1 homolog, chloroplastic [Benincasa hispida]	[more]
XP_031740278.1	1.0e-107	89.03	translation factor GUF1 homolog, chloroplastic isoform X4 [Cucumis sativus]	[more]
XP_031740276.1	1.0e-107	89.03	translation factor GUF1 homolog, chloroplastic isoform X2 [Cucumis sativus]	[more]
XP_031740277.1	1.0e-107	89.03	translation factor GUF1 homolog, chloroplastic isoform X3 [Cucumis sativus]	[more]
XP_011653860.1	1.0e-107	89.03	translation factor GUF1 homolog, chloroplastic isoform X1 [Cucumis sativus] >KGN...	[more]

BLAST of HG10018052 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A5B4D2	1.4e-80	71.07	Translation factor GUF1 homolog, chloroplastic OS=Vitis vinifera OX=29760 GN=VIT...	[more]
B9GHA6	3.1e-80	85.64	Translation factor GUF1 homolog, chloroplastic OS=Populus trichocarpa OX=3694 GN...	[more]
B9RHQ5	3.1e-80	67.48	Translation factor GUF1 homolog, chloroplastic OS=Ricinus communis OX=3988 GN=RC...	[more]
Q9FNM5	1.2e-76	67.07	Translation factor GUF1 homolog, chloroplastic OS=Arabidopsis thaliana OX=3702 G...	[more]
B9F2U5	2.3e-75	76.65	Translation factor GUF1 homolog, chloroplastic OS=Oryza sativa subsp. japonica O...	[more]

BLAST of HG10018052 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BMN9	1.1e-107	89.03	Translation factor GUF1 homolog, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A6J1HRW4	3.0e-102	86.61	Translation factor GUF1 homolog, chloroplastic OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1EAZ6	5.2e-102	85.77	Translation factor GUF1 homolog, chloroplastic OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A0A0L295	3.8e-97	86.22	Tr-type G domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G437520 P...	[more]
A0A6J1DVN5	6.5e-97	83.75	Translation factor GUF1 homolog, chloroplastic OS=Momordica charantia OX=3673 GN...	[more]

BLAST of HG10018052 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G08650.1	8.8e-78	67.07	Small GTP-binding protein	[more]
AT5G39900.1	2.7e-50	59.06	Small GTP-binding protein	[more]
AT5G13650.1	7.3e-24	43.24	elongation factor family protein	[more]
AT5G13650.2	7.3e-24	43.24	elongation factor family protein	[more]
AT2G31060.2	8.1e-23	45.52	elongation factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000795	Translational (tr)-type GTP-binding domain	PRINTS	PR00315	ELONGATNFCT	coord: 177..188 score: 32.83 coord: 213..222 score: 43.86 coord: 137..145 score: 61.71 coord: 161..171 score: 63.17 coord: 94..107 score: 58.25
IPR000795	Translational (tr)-type GTP-binding domain	PFAM	PF00009	GTP_EFTU	coord: 91..241 e-value: 7.0E-53 score: 179.1
IPR000795	Translational (tr)-type GTP-binding domain	PROSITE	PS51722	G_TR_2	coord: 90..250 score: 55.25563
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 83..248 e-value: 6.1E-59 score: 201.8
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 86..237
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 93..237 e-value: 1.7E-19 score: 68.1
IPR006297	Elongation factor 4	PANTHER	PTHR43512	TRANSLATION FACTOR GUF1-RELATED	coord: 69..237
None	No IPR available	PANTHER	PTHR43512:SF6	TRANSLATION FACTOR GUF1 HOMOLOG, MITOCHONDRIAL	coord: 69..237
None	No IPR available	CDD	cd01890	LepA	coord: 93..237 e-value: 3.95993E-113 score: 320.25
IPR031157	Tr-type G domain, conserved site	PROSITE	PS00301	G_TR_1	coord: 130..145

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10018052.1	HG10018052.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045727	positive regulation of translation
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0016020	membrane
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding