HG10017985 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10017985
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionAspartate carbamoyltransferase
LocationChr03: 28581138 .. 28582629 (-)
RNA-Seq ExpressionHG10017985
SyntenyHG10017985
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATCCAGACTCCAGAGCTTCTTTTGCTAAGCTTTGCGAGAACTTGAAAATAATCCTGTTGGTAATCTTCTGCTATGATTAATATCTGCATCTATTTTCTTTTTTGAAACCCTTTGACCTTGTTTTGGTTCTGGCAGGCTCTTCTAGATGTATATACTATTCAGAGAGAGATAGGAAAACTTGATGGAATTAAAGTTGGGCTCGTGGGAGATCTTGCTACTGGGAGAACTGTACGGTCACTTGCATATTTGCTCGTTAAGTATCAAGATGTGAAAATATACCTTGTCTACCCAGATGTTCTAAAAATGAAGGTAAGTTTTAAAGCAAAAATCTACCATTATTGCCTATTGTGAATGACATTCTTTGTTGGCCATGATATTGGGAAACTATGTTTGGAGACTGGATAAACTGACTATGCTATTACTTGTGTCTATTTTAAAGTAAATCGGACAAGTAAAAACTATATGAGTGTGTTTGGTTCAAGGAGTTGGGAAGTAAAAGTAGGGAAGTAGAAGTTTGTGAACTCCACTCCTTATTTGGCCCATAAAAAATGTCAATTTTATATCTTGTCAACTCCTTACACTGTGGCCCCAAGAGTTCACAACTCCATAGACTTTATAATTTCTTACTTCTCACTATTTCACTCCTTATCCCAAACACTCCCTATAAAGTTACTAGTTGCTTTAAAATCTTCCAACGGTTAAACTTGTTTGTTTATCTAGGATGATATAAAATACTATTTGACATCACTAGATGTGAAATGGGAAGAATGTGACAACTTGATGGAAGTTGCATCAGAGTGTGATTTGGTATATCAAACTCGTATTCAGCCGGAAAAATTTGTAGAGAGGATTGATCTTTATGAACAAGCTAAAAAAAGAAAAAAAAGTGTTAAAAGTGAAGCAGAGACAATCTGTGGTCATGCACCCCCTCCCTAGGCTTGATGAATCATAAGCATCAAATCCTTCGACCACTTAAGTCAGTGTTTGAAACAATCCACATATCTTCATTGGCACACTGTTAAACGAGTGCTTCCTTACCTAGTTGGAACCAAGATAGTGTGCCTTCATGTTCAACCAGGGTGTGACTAATTTTCTGTTATTGCCTTTTTAGATGCCGACTAGGCGGTCGACACTTTGTTGCAGCCTACCATGTGTTTCTTGGGAATACTCTTGTGTGTTGGAGGTCCTCCAAGTAACAAACTGCAATGTCCAGATCAAGCACATAATCAGAATATCGAGCTATAACACATGCAACTGCTGAAATTATTTGGCTTCATTAATTACTTGACGAACTTGGTGTTTTCGTATATATGGTTTACTTGTTTGTCATTCACTTATTAGCGAGATATTGTTGGTTACAATGGTCACTGCCACACTTACAATCATTATGGTGGGGATCAAACATTCAACTTCAAGAGAGGTAGTACATGTCAATTAGCGCCGAGTAAGCTCACTTGGGTTGTTGCTATACACATCTATGACTATTAG

mRNA sequence

ATGGATCCAGACTCCAGAGCTTCTTTTGCTAAGCTTTGCGAGAACTTGAAAATAATCCTGTTGAGAGAGATAGGAAAACTTGATGGAATTAAAGTTGGGCTCGTGGGAGATCTTGCTACTGGGAGAACTGTACGGTCACTTGCATATTTGCTCGTTAAGTATCAAGATGTGAAAATATACCTTGTCTACCCAGATGTTCTAAAAATGAAGGATGATATAAAATACTATTTGACATCACTAGATGTGAAATGGGAAGAATGTGACAACTTGATGGAAGTTGCATCAGAGTGTGATTTGGTATATCAAACTCGTATTCAGCCGGAAAAATTTCGAGATATTGTTGGTTACAATGGTCACTGCCACACTTACAATCATTATGGTGGGGATCAAACATTCAACTTCAAGAGAGGTAGTACATGTCAATTAGCGCCGAGTAAGCTCACTTGGGTTGTTGCTATACACATCTATGACTATTAG

Coding sequence (CDS)

ATGGATCCAGACTCCAGAGCTTCTTTTGCTAAGCTTTGCGAGAACTTGAAAATAATCCTGTTGAGAGAGATAGGAAAACTTGATGGAATTAAAGTTGGGCTCGTGGGAGATCTTGCTACTGGGAGAACTGTACGGTCACTTGCATATTTGCTCGTTAAGTATCAAGATGTGAAAATATACCTTGTCTACCCAGATGTTCTAAAAATGAAGGATGATATAAAATACTATTTGACATCACTAGATGTGAAATGGGAAGAATGTGACAACTTGATGGAAGTTGCATCAGAGTGTGATTTGGTATATCAAACTCGTATTCAGCCGGAAAAATTTCGAGATATTGTTGGTTACAATGGTCACTGCCACACTTACAATCATTATGGTGGGGATCAAACATTCAACTTCAAGAGAGGTAGTACATGTCAATTAGCGCCGAGTAAGCTCACTTGGGTTGTTGCTATACACATCTATGACTATTAG

Protein sequence

MDPDSRASFAKLCENLKIILLREIGKLDGIKVGLVGDLATGRTVRSLAYLLVKYQDVKIYLVYPDVLKMKDDIKYYLTSLDVKWEECDNLMEVASECDLVYQTRIQPEKFRDIVGYNGHCHTYNHYGGDQTFNFKRGSTCQLAPSKLTWVVAIHIYDY
Homology
[Close]
BLAST of HG10017985 vs. NCBI nr
Match: XP_038905711.1 (aspartate carbamoyltransferase, chloroplastic [Benincasa hispida])

HSP 1 Score: 159.8 bits (403), Expect = 1.9e-35
Identity = 79/89 (88.76%), Postives = 82/89 (92.13%), Query Frame = 0 

Query: 22  REIGKLDGIKVGLVGDLATGRTVRSLAYLLVKYQDVKIYLVYPDVLKMKDDIKYYLTSLD 81
           REIGKLDGIKVGLVGDLA GRTVRSLAYLL KYQDVKIY V PDV+KMKDDIK YLTS D
Sbjct: 316 REIGKLDGIKVGLVGDLANGRTVRSLAYLLAKYQDVKIYFVSPDVVKMKDDIKDYLTSQD 375

Query: 82  VKWEECDNLMEVASECDLVYQTRIQPEKF 111
           VKWEECDNLMEVASECD+VYQTRIQ E+F
Sbjct: 376 VKWEECDNLMEVASECDVVYQTRIQRERF 404

[Close]
BLAST of HG10017985 vs. NCBI nr
Match: XP_008449144.1 (PREDICTED: aspartate carbamoyltransferase, chloroplastic [Cucumis melo] >KAA0055856.1 aspartate carbamoyltransferase [Cucumis melo var. makuwa] >TYK24080.1 aspartate carbamoyltransferase [Cucumis melo var. makuwa])

HSP 1 Score: 158.3 bits (399), Expect = 5.4e-35
Identity = 78/89 (87.64%), Postives = 82/89 (92.13%), Query Frame = 0 

Query: 22  REIGKLDGIKVGLVGDLATGRTVRSLAYLLVKYQDVKIYLVYPDVLKMKDDIKYYLTSLD 81
           REIGKLDGIKVGLVGDLA GRTVRSLAYLL KY+DVKIY V PDV+KMKDDIK YLTS D
Sbjct: 239 REIGKLDGIKVGLVGDLANGRTVRSLAYLLAKYKDVKIYFVSPDVVKMKDDIKDYLTSQD 298

Query: 82  VKWEECDNLMEVASECDLVYQTRIQPEKF 111
           VKWEECDNLMEVASECD+VYQTRIQ E+F
Sbjct: 299 VKWEECDNLMEVASECDVVYQTRIQRERF 327

[Close]
BLAST of HG10017985 vs. NCBI nr
Match: XP_022158871.1 (aspartate carbamoyltransferase, chloroplastic isoform X1 [Momordica charantia])

HSP 1 Score: 157.5 bits (397), Expect = 9.3e-35
Identity = 78/89 (87.64%), Postives = 81/89 (91.01%), Query Frame = 0 

Query: 22  REIGKLDGIKVGLVGDLATGRTVRSLAYLLVKYQDVKIYLVYPDVLKMKDDIKYYLTSLD 81
           REIGKLDGIKVGLVGDLA GRTVRSLAYLL KYQDVKIY V PDV+KMKDDIK YLTS  
Sbjct: 234 REIGKLDGIKVGLVGDLANGRTVRSLAYLLAKYQDVKIYFVSPDVVKMKDDIKDYLTSQG 293

Query: 82  VKWEECDNLMEVASECDLVYQTRIQPEKF 111
           VKWEECDNLMEVASECD+VYQTRIQ E+F
Sbjct: 294 VKWEECDNLMEVASECDVVYQTRIQQERF 322

[Close]
BLAST of HG10017985 vs. NCBI nr
Match: XP_004149350.1 (aspartate carbamoyltransferase, chloroplastic [Cucumis sativus] >KGN56108.1 hypothetical protein Csa_009798 [Cucumis sativus])

HSP 1 Score: 156.0 bits (393), Expect = 2.7e-34
Identity = 77/89 (86.52%), Postives = 81/89 (91.01%), Query Frame = 0 

Query: 22  REIGKLDGIKVGLVGDLATGRTVRSLAYLLVKYQDVKIYLVYPDVLKMKDDIKYYLTSLD 81
           REIGKLDGIKVGLVGDLA GRTVRSLAYLL KY+DVKIY V PDV+KMKDDIK YLTS D
Sbjct: 239 REIGKLDGIKVGLVGDLANGRTVRSLAYLLAKYKDVKIYFVSPDVVKMKDDIKDYLTSQD 298

Query: 82  VKWEECDNLMEVASECDLVYQTRIQPEKF 111
           VKWEECDNL EVASECD+VYQTRIQ E+F
Sbjct: 299 VKWEECDNLTEVASECDVVYQTRIQRERF 327

[Close]
BLAST of HG10017985 vs. NCBI nr
Match: KAG7015530.1 (Aspartate carbamoyltransferase 2, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 154.5 bits (389), Expect = 7.9e-34
Identity = 76/89 (85.39%), Postives = 81/89 (91.01%), Query Frame = 0 

Query: 22  REIGKLDGIKVGLVGDLATGRTVRSLAYLLVKYQDVKIYLVYPDVLKMKDDIKYYLTSLD 81
           REIGKLDGIKVGLVGDLA GRTVRSLAYLL KYQDVKIY V PDV+KMKDDIK YL+S  
Sbjct: 318 REIGKLDGIKVGLVGDLANGRTVRSLAYLLAKYQDVKIYFVSPDVVKMKDDIKEYLSSQG 377

Query: 82  VKWEECDNLMEVASECDLVYQTRIQPEKF 111
           VKWEEC+NLMEVASECD+VYQTRIQ E+F
Sbjct: 378 VKWEECENLMEVASECDVVYQTRIQRERF 406

[Close]
BLAST of HG10017985 vs. ExPASy Swiss-Prot
Match: Q43086 (Aspartate carbamoyltransferase 1, chloroplastic OS=Pisum sativum OX=3888 GN=PYRB1 PE=2 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 4.1e-33
Identity = 70/89 (78.65%), Postives = 79/89 (88.76%), Query Frame = 0 

Query: 22  REIGKLDGIKVGLVGDLATGRTVRSLAYLLVKYQDVKIYLVYPDVLKMKDDIKYYLTSLD 81
           REIGKLDGIKVGLVGDLA GRTVRSLAYLL KY+DVK+Y V P+V+KMKDDIK YLTS  
Sbjct: 224 REIGKLDGIKVGLVGDLANGRTVRSLAYLLAKYRDVKLYFVSPNVVKMKDDIKEYLTSKG 283

Query: 82  VKWEECDNLMEVASECDLVYQTRIQPEKF 111
           V+WEE  +LMEVAS+CD+VYQTRIQ E+F
Sbjct: 284 VEWEESSDLMEVASKCDVVYQTRIQKERF 312

[Close]
BLAST of HG10017985 vs. ExPASy Swiss-Prot
Match: Q43064 (Aspartate carbamoyltransferase 3, chloroplastic OS=Pisum sativum OX=3888 GN=PYRB3 PE=2 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 4.1e-33
Identity = 71/89 (79.78%), Postives = 78/89 (87.64%), Query Frame = 0 

Query: 22  REIGKLDGIKVGLVGDLATGRTVRSLAYLLVKYQDVKIYLVYPDVLKMKDDIKYYLTSLD 81
           REIGKLDGIKVGLVGDLA GRTVRSLAYLL KY+DVKIY V P+V+KMKDDIK YLTS  
Sbjct: 229 REIGKLDGIKVGLVGDLANGRTVRSLAYLLAKYKDVKIYFVSPEVVKMKDDIKDYLTSKG 288

Query: 82  VKWEECDNLMEVASECDLVYQTRIQPEKF 111
           V WEE  +L+EVASECD+VYQTRIQ E+F
Sbjct: 289 VDWEESSDLVEVASECDVVYQTRIQKERF 317

[Close]
BLAST of HG10017985 vs. ExPASy Swiss-Prot
Match: Q43087 (Aspartate carbamoyltransferase 2, chloroplastic OS=Pisum sativum OX=3888 GN=PYRB2 PE=2 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 1.2e-32
Identity = 70/89 (78.65%), Postives = 77/89 (86.52%), Query Frame = 0 

Query: 22  REIGKLDGIKVGLVGDLATGRTVRSLAYLLVKYQDVKIYLVYPDVLKMKDDIKYYLTSLD 81
           REIGKLDGIKVGLVGDLA GRTVRSL YLL KY+DVKIY V P+V+KMKDDIK YLTS  
Sbjct: 223 REIGKLDGIKVGLVGDLANGRTVRSLTYLLAKYKDVKIYFVSPEVVKMKDDIKDYLTSKG 282

Query: 82  VKWEECDNLMEVASECDLVYQTRIQPEKF 111
           V WEE  +L+EVASECD+VYQTRIQ E+F
Sbjct: 283 VDWEESSDLVEVASECDVVYQTRIQKERF 311

[Close]
BLAST of HG10017985 vs. ExPASy Swiss-Prot
Match: Q9LD61 (Aspartate carbamoyltransferase, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=PYRB PE=2 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 5.9e-32
Identity = 66/89 (74.16%), Postives = 78/89 (87.64%), Query Frame = 0 

Query: 22  REIGKLDGIKVGLVGDLATGRTVRSLAYLLVKYQDVKIYLVYPDVLKMKDDIKYYLTSLD 81
           REIG LDGIK+GLVGDLA GRTVRSLAYL+ KYQ++KIY V PDV+KMKDDIK YLTS  
Sbjct: 201 REIGTLDGIKLGLVGDLANGRTVRSLAYLIAKYQNIKIYFVSPDVVKMKDDIKEYLTSQG 260

Query: 82  VKWEECDNLMEVASECDLVYQTRIQPEKF 111
           V+WEE  +L+EVAS+CD++YQTRIQ E+F
Sbjct: 261 VEWEESSDLLEVASKCDVIYQTRIQKERF 289

[Close]
BLAST of HG10017985 vs. ExPASy Swiss-Prot
Match: P49077 (Aspartate carbamoyltransferase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PYRB PE=2 SV=2)

HSP 1 Score: 134.4 bits (337), Expect = 1.1e-30
Identity = 66/88 (75.00%), Postives = 76/88 (86.36%), Query Frame = 0 

Query: 23  EIGKLDGIKVGLVGDLATGRTVRSLAYLLVKYQDVKIYLVYPDVLKMKDDIKYYLTSLDV 82
           EIGKLDGI V LVGDLA GRTVRSLAYLL K++DVKIY V P+++KMKDDIK YLTS  V
Sbjct: 229 EIGKLDGISVALVGDLANGRTVRSLAYLLAKFKDVKIYFVSPEIVKMKDDIKDYLTSSGV 288

Query: 83  KWEECDNLMEVASECDLVYQTRIQPEKF 111
           +WEE  +LMEVAS+CD+VYQTRIQ E+F
Sbjct: 289 EWEESSDLMEVASKCDVVYQTRIQRERF 316

[Close]
BLAST of HG10017985 vs. ExPASy TrEMBL
Match: A0A5A7UNJ2 (Aspartate carbamoyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold943G00510 PE=3 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 2.6e-35
Identity = 78/89 (87.64%), Postives = 82/89 (92.13%), Query Frame = 0 

Query: 22  REIGKLDGIKVGLVGDLATGRTVRSLAYLLVKYQDVKIYLVYPDVLKMKDDIKYYLTSLD 81
           REIGKLDGIKVGLVGDLA GRTVRSLAYLL KY+DVKIY V PDV+KMKDDIK YLTS D
Sbjct: 239 REIGKLDGIKVGLVGDLANGRTVRSLAYLLAKYKDVKIYFVSPDVVKMKDDIKDYLTSQD 298

Query: 82  VKWEECDNLMEVASECDLVYQTRIQPEKF 111
           VKWEECDNLMEVASECD+VYQTRIQ E+F
Sbjct: 299 VKWEECDNLMEVASECDVVYQTRIQRERF 327

[Close]
BLAST of HG10017985 vs. ExPASy TrEMBL
Match: A0A1S3BLD7 (Aspartate carbamoyltransferase OS=Cucumis melo OX=3656 GN=LOC103491094 PE=3 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 2.6e-35
Identity = 78/89 (87.64%), Postives = 82/89 (92.13%), Query Frame = 0 

Query: 22  REIGKLDGIKVGLVGDLATGRTVRSLAYLLVKYQDVKIYLVYPDVLKMKDDIKYYLTSLD 81
           REIGKLDGIKVGLVGDLA GRTVRSLAYLL KY+DVKIY V PDV+KMKDDIK YLTS D
Sbjct: 239 REIGKLDGIKVGLVGDLANGRTVRSLAYLLAKYKDVKIYFVSPDVVKMKDDIKDYLTSQD 298

Query: 82  VKWEECDNLMEVASECDLVYQTRIQPEKF 111
           VKWEECDNLMEVASECD+VYQTRIQ E+F
Sbjct: 299 VKWEECDNLMEVASECDVVYQTRIQRERF 327

[Close]
BLAST of HG10017985 vs. ExPASy TrEMBL
Match: A0A6J1E281 (Aspartate carbamoyltransferase OS=Momordica charantia OX=3673 GN=LOC111025337 PE=3 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 4.5e-35
Identity = 78/89 (87.64%), Postives = 81/89 (91.01%), Query Frame = 0 

Query: 22  REIGKLDGIKVGLVGDLATGRTVRSLAYLLVKYQDVKIYLVYPDVLKMKDDIKYYLTSLD 81
           REIGKLDGIKVGLVGDLA GRTVRSLAYLL KYQDVKIY V PDV+KMKDDIK YLTS  
Sbjct: 234 REIGKLDGIKVGLVGDLANGRTVRSLAYLLAKYQDVKIYFVSPDVVKMKDDIKDYLTSQG 293

Query: 82  VKWEECDNLMEVASECDLVYQTRIQPEKF 111
           VKWEECDNLMEVASECD+VYQTRIQ E+F
Sbjct: 294 VKWEECDNLMEVASECDVVYQTRIQQERF 322

[Close]
BLAST of HG10017985 vs. ExPASy TrEMBL
Match: A0A0A0L2Y6 (Aspartate carbamoyltransferase OS=Cucumis sativus OX=3659 GN=Csa_3G074470 PE=3 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 1.3e-34
Identity = 77/89 (86.52%), Postives = 81/89 (91.01%), Query Frame = 0 

Query: 22  REIGKLDGIKVGLVGDLATGRTVRSLAYLLVKYQDVKIYLVYPDVLKMKDDIKYYLTSLD 81
           REIGKLDGIKVGLVGDLA GRTVRSLAYLL KY+DVKIY V PDV+KMKDDIK YLTS D
Sbjct: 239 REIGKLDGIKVGLVGDLANGRTVRSLAYLLAKYKDVKIYFVSPDVVKMKDDIKDYLTSQD 298

Query: 82  VKWEECDNLMEVASECDLVYQTRIQPEKF 111
           VKWEECDNL EVASECD+VYQTRIQ E+F
Sbjct: 299 VKWEECDNLTEVASECDVVYQTRIQRERF 327

[Close]
BLAST of HG10017985 vs. ExPASy TrEMBL
Match: A0A6J1HJC0 (Aspartate carbamoyltransferase OS=Cucurbita maxima OX=3661 GN=LOC111465042 PE=3 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 3.8e-34
Identity = 76/89 (85.39%), Postives = 81/89 (91.01%), Query Frame = 0 

Query: 22  REIGKLDGIKVGLVGDLATGRTVRSLAYLLVKYQDVKIYLVYPDVLKMKDDIKYYLTSLD 81
           REIGKLDGIKVGLVGDLA GRTVRSLAYLL KYQDVKIY V PDV+KMKDDIK YL+S  
Sbjct: 239 REIGKLDGIKVGLVGDLANGRTVRSLAYLLAKYQDVKIYFVSPDVVKMKDDIKEYLSSQG 298

Query: 82  VKWEECDNLMEVASECDLVYQTRIQPEKF 111
           VKWEEC+NLMEVASECD+VYQTRIQ E+F
Sbjct: 299 VKWEECENLMEVASECDVVYQTRIQRERF 327

[Close]
BLAST of HG10017985 vs. TAIR 10
Match: AT3G20330.1 (PYRIMIDINE B )

HSP 1 Score: 134.4 bits (337), Expect = 7.9e-32
Identity = 66/88 (75.00%), Postives = 76/88 (86.36%), Query Frame = 0 

Query: 23  EIGKLDGIKVGLVGDLATGRTVRSLAYLLVKYQDVKIYLVYPDVLKMKDDIKYYLTSLDV 82
           EIGKLDGI V LVGDLA GRTVRSLAYLL K++DVKIY V P+++KMKDDIK YLTS  V
Sbjct: 229 EIGKLDGISVALVGDLANGRTVRSLAYLLAKFKDVKIYFVSPEIVKMKDDIKDYLTSSGV 288

Query: 83  KWEECDNLMEVASECDLVYQTRIQPEKF 111
           +WEE  +LMEVAS+CD+VYQTRIQ E+F
Sbjct: 289 EWEESSDLMEVASKCDVVYQTRIQRERF 316

The following BLAST results are available for this feature:
BLAST of HG10017985 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038905711.11.9e-3588.76aspartate carbamoyltransferase, chloroplastic [Benincasa hispida][more]
XP_008449144.15.4e-3587.64PREDICTED: aspartate carbamoyltransferase, chloroplastic [Cucumis melo] >KAA0055... [more]
XP_022158871.19.3e-3587.64aspartate carbamoyltransferase, chloroplastic isoform X1 [Momordica charantia][more]
XP_004149350.12.7e-3486.52aspartate carbamoyltransferase, chloroplastic [Cucumis sativus] >KGN56108.1 hypo... [more]
KAG7015530.17.9e-3485.39Aspartate carbamoyltransferase 2, chloroplastic, partial [Cucurbita argyrosperma... [more]
BLAST of HG10017985 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q430864.1e-3378.65Aspartate carbamoyltransferase 1, chloroplastic OS=Pisum sativum OX=3888 GN=PYRB... [more]
Q430644.1e-3379.78Aspartate carbamoyltransferase 3, chloroplastic OS=Pisum sativum OX=3888 GN=PYRB... [more]
Q430871.2e-3278.65Aspartate carbamoyltransferase 2, chloroplastic OS=Pisum sativum OX=3888 GN=PYRB... [more]
Q9LD615.9e-3274.16Aspartate carbamoyltransferase, chloroplastic OS=Oryza sativa subsp. japonica OX... [more]
P490771.1e-3075.00Aspartate carbamoyltransferase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN... [more]
BLAST of HG10017985 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7UNJ22.6e-3587.64Aspartate carbamoyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s... [more]
A0A1S3BLD72.6e-3587.64Aspartate carbamoyltransferase OS=Cucumis melo OX=3656 GN=LOC103491094 PE=3 SV=1[more]
A0A6J1E2814.5e-3587.64Aspartate carbamoyltransferase OS=Momordica charantia OX=3673 GN=LOC111025337 PE... [more]
A0A0A0L2Y61.3e-3486.52Aspartate carbamoyltransferase OS=Cucumis sativus OX=3659 GN=Csa_3G074470 PE=3 S... [more]
A0A6J1HJC03.8e-3485.39Aspartate carbamoyltransferase OS=Cucurbita maxima OX=3661 GN=LOC111465042 PE=3 ... [more]
BLAST of HG10017985 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G20330.17.9e-3275.00PYRIMIDINE B [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036901Aspartate/ornithine carbamoyltransferase superfamilyGENE3D3.40.50.1370Aspartate/ornithine carbamoyltransferasecoord: 16..135
e-value: 7.7E-18
score: 67.1
IPR036901Aspartate/ornithine carbamoyltransferase superfamilySUPERFAMILY53671Aspartate/ornithine carbamoyltransferasecoord: 27..123
IPR006131Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domainPFAMPF00185OTCacecoord: 28..107
e-value: 3.8E-7
score: 30.3
NoneNo IPR availablePANTHERPTHR11405CARBAMOYLTRANSFERASE FAMILY MEMBERcoord: 20..113
NoneNo IPR availablePANTHERPTHR11405:SF52ASPARTATE CARBAMOYLTRANSFERASE, CATALYTIC CHAINcoord: 20..113

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10017985.1HG10017985.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006520 cellular amino acid metabolic process
biological_process GO:0016036 cellular response to phosphate starvation
biological_process GO:0006207 'de novo' pyrimidine nucleobase biosynthetic process
biological_process GO:0044205 'de novo' UMP biosynthetic process
cellular_component GO:0005829 cytosol
molecular_function GO:0016597 amino acid binding
molecular_function GO:0004070 aspartate carbamoyltransferase activity
molecular_function GO:0016743 carboxyl- or carbamoyltransferase activity