HG10017983 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10017983
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
LocationChr03: 28539096 .. 28540085 (+)
RNA-Seq ExpressionHG10017983
SyntenyHG10017983
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATTATTACCGATCAAAGAAGACGTTCAAGAAAAAAATCAGCCGTTGTTATAGGCAAGATAATCAATTTTACTTCCAAAAACAATGTTGGGATTCAGACTTAAGTGATTCAGAAGAAGAATTTCAACATACTAATTTTGCCCATGCTCGATTTTCTCAAAGAACCTATCATATGCATTATCCACATTGGAAACTTGATTCTAGTGATTCTAGTGACTTCGAAGACGTTTCTAAGTCAGTTTGGGATGGAATAAGAAGGCGACAATATCGAAAAAAGGCTCAACGATCCAATCAAACCCATTTTTCAAGAAATCAACATAAAGATTGGGAGTTAGATGAATTAAAGAATCATCAAGAATCGTTAAGAATGGATTTTTATAGCCCAAGAAGAATGTTCAAGACTCGAAATTATTCTTTTAGTTACGAAACACAATCAAGAAAGGTTGATTCAAGAAAATCAATGCTTGAGTTCTATACCCACAACGAGATTGAAACATATCCAAGAATCCAACAAAATGACTACTTTGATCCCATAGCATTGGAGAAAATAAAGAAACCAACAAAAGAAATCCAACGTTCATTGGAAAAAACGACTCAACATATTGATCATTTATCAACTCATTTGCAAGAGTTTAAGAATGGATTGATTTCATATACAGAAGAAAACACAAAAGAATCACAGTTGGAAACTTTTCAATTAGAAAATCTTGAAGATAAAATTGGAAAAAATCTTGTTGAGAACCATGTAGTTAATGGAGGTGATTGGGACAAAAATCATGAGAACGAAGTAAAAGAAGAAGAAAAAGAAGAATTTAAAGATGTTAATTTGGAAATTATCTCAAGTGAAGAAGAAAAATTCAACGAAGAAGATGGAATAGAGGTATCGAACACTGAGCAAGAATCGAGCAAGAACAATGACACATTGATTGCGTTCGGAATAAATCACCAAACTGTCGAAGAACTTCAACGAATGATAAAGAAGATGTGA

mRNA sequence

ATGGATTATTACCGATCAAAGAAGACGTTCAAGAAAAAAATCAGCCGTTGTTATAGGCAAGATAATCAATTTTACTTCCAAAAACAATGTTGGGATTCAGACTTAAGTGATTCAGAAGAAGAATTTCAACATACTAATTTTGCCCATGCTCGATTTTCTCAAAGAACCTATCATATGCATTATCCACATTGGAAACTTGATTCTAGTGATTCTAGTGACTTCGAAGACGTTTCTAAGTCAGTTTGGGATGGAATAAGAAGGCGACAATATCGAAAAAAGGCTCAACGATCCAATCAAACCCATTTTTCAAGAAATCAACATAAAGATTGGGAGTTAGATGAATTAAAGAATCATCAAGAATCGTTAAGAATGGATTTTTATAGCCCAAGAAGAATGTTCAAGACTCGAAATTATTCTTTTAGTTACGAAACACAATCAAGAAAGGTTGATTCAAGAAAATCAATGCTTGAGTTCTATACCCACAACGAGATTGAAACATATCCAAGAATCCAACAAAATGACTACTTTGATCCCATAGCATTGGAGAAAATAAAGAAACCAACAAAAGAAATCCAACGTTCATTGGAAAAAACGACTCAACATATTGATCATTTATCAACTCATTTGCAAGAGTTTAAGAATGGATTGATTTCATATACAGAAGAAAACACAAAAGAATCACAGTTGGAAACTTTTCAATTAGAAAATCTTGAAGATAAAATTGGAAAAAATCTTGTTGAGAACCATGTAGTTAATGGAGGTGATTGGGACAAAAATCATGAGAACGAAGTAAAAGAAGAAGAAAAAGAAGAATTTAAAGATGTTAATTTGGAAATTATCTCAAGTGAAGAAGAAAAATTCAACGAAGAAGATGGAATAGAGGTATCGAACACTGAGCAAGAATCGAGCAAGAACAATGACACATTGATTGCGTTCGGAATAAATCACCAAACTGTCGAAGAACTTCAACGAATGATAAAGAAGATGTGA

Coding sequence (CDS)

ATGGATTATTACCGATCAAAGAAGACGTTCAAGAAAAAAATCAGCCGTTGTTATAGGCAAGATAATCAATTTTACTTCCAAAAACAATGTTGGGATTCAGACTTAAGTGATTCAGAAGAAGAATTTCAACATACTAATTTTGCCCATGCTCGATTTTCTCAAAGAACCTATCATATGCATTATCCACATTGGAAACTTGATTCTAGTGATTCTAGTGACTTCGAAGACGTTTCTAAGTCAGTTTGGGATGGAATAAGAAGGCGACAATATCGAAAAAAGGCTCAACGATCCAATCAAACCCATTTTTCAAGAAATCAACATAAAGATTGGGAGTTAGATGAATTAAAGAATCATCAAGAATCGTTAAGAATGGATTTTTATAGCCCAAGAAGAATGTTCAAGACTCGAAATTATTCTTTTAGTTACGAAACACAATCAAGAAAGGTTGATTCAAGAAAATCAATGCTTGAGTTCTATACCCACAACGAGATTGAAACATATCCAAGAATCCAACAAAATGACTACTTTGATCCCATAGCATTGGAGAAAATAAAGAAACCAACAAAAGAAATCCAACGTTCATTGGAAAAAACGACTCAACATATTGATCATTTATCAACTCATTTGCAAGAGTTTAAGAATGGATTGATTTCATATACAGAAGAAAACACAAAAGAATCACAGTTGGAAACTTTTCAATTAGAAAATCTTGAAGATAAAATTGGAAAAAATCTTGTTGAGAACCATGTAGTTAATGGAGGTGATTGGGACAAAAATCATGAGAACGAAGTAAAAGAAGAAGAAAAAGAAGAATTTAAAGATGTTAATTTGGAAATTATCTCAAGTGAAGAAGAAAAATTCAACGAAGAAGATGGAATAGAGGTATCGAACACTGAGCAAGAATCGAGCAAGAACAATGACACATTGATTGCGTTCGGAATAAATCACCAAACTGTCGAAGAACTTCAACGAATGATAAAGAAGATGTGA

Protein sequence

MDYYRSKKTFKKKISRCYRQDNQFYFQKQCWDSDLSDSEEEFQHTNFAHARFSQRTYHMHYPHWKLDSSDSSDFEDVSKSVWDGIRRRQYRKKAQRSNQTHFSRNQHKDWELDELKNHQESLRMDFYSPRRMFKTRNYSFSYETQSRKVDSRKSMLEFYTHNEIETYPRIQQNDYFDPIALEKIKKPTKEIQRSLEKTTQHIDHLSTHLQEFKNGLISYTEENTKESQLETFQLENLEDKIGKNLVENHVVNGGDWDKNHENEVKEEEKEEFKDVNLEIISSEEEKFNEEDGIEVSNTEQESSKNNDTLIAFGINHQTVEELQRMIKKM
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 265..285
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 283..306

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10017983.1HG10017983.1mRNA