HG10017962 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGGAGGCAGCGGCCGCGGGTTTCTTGCACAAGCTGTTAACCGGACGGTGGTTAATGCTATTCGCATCACTAACCATCATGGCAATGAACGGATCAGGCTACATGTTCGGGCTCTACTCCGCCCGCATCAAATCCATTTTTCGTTACGATCAGTCGGCTCTTAATTTTATCAGCTTCTTCAAGGACTTGGGTGGCAATCTTGGGGTGGTTTCCGGCCTCCTCTACGAGGTCGCACCACCGTGGCTGGTTCTCTCTGTTGGTGCCGTCCTCAACTTTTTCGCCTACTTCATGCTCTGGTCGGCGGTTTCTGGCCGGACCGCCGCACCGGGGCTGTGGTTGATGTGTGTTTATATGGGCGTTGCTGCTAACTCATTGTCTTTTGCTAATACGGCGGCTTTGGTTACTTGTGTTCGTAACTTTCCTCTTCATCGTGGCTGCCTTCTTAAAGGGTATATATACTCAACTGTCAACTCATCATCATTTTTTTGAGAGAGGATTATTATTCTAATCTCTTTCACTTATTGTTTTGTTTATTAATCTTGAAAATCATGATCTTCTTAATCATTGGTTGAATGGGGAATGGGAGGGTTTGGGCATTTCGAAATAATTTCATATTCGAAATGTTTTGCAATTCGTTGATAACTTTTAATTTTGTGTTAAATATTTAATAAATTCATGAAGATGAGTCTCAATTTTTTCAATTTGAAATAAAATTTAATTTTATATCTAATTGAATCATAAGTTTTAAATTTTATACCTAATAGAAGATATATGGATTTTAATGAATGTTGAATAGGTTAATTATTAGGCACAAAATAAAAATTTATGTCAAATGGACTTTTAAGATTTTCAAATATGTCAAAGACTATTGAAACAAGAAATTGAAAGTACAAAAATTTAATAAAAATAAAATTTTAAATTTTAGGTCTCGTTTGGTAACTATTTGGTTTTTTGTTTTTTGTTTTTGAAAATTAAGCCTAAAAACACTTCTTTCACCTCTAATTTCTTGATTTGGTGTCTACTTGTAACTAATGTTTTCAAAAACCAAGACAAATTTTAAAAACTAAAAATATAGTTTTAAAAAACTTTTTTTTTTTTGAATTTGGCTAAGAATTCAAATCTTGTATTTAAGAAAGATACAAATCGTTATAAGAAATTGAGAGAAAATAGGCTTTAATTTAAAAAACGAAACGATTATTAAACGGGATTTTGAAGACACATTGGACACTTCTTAGGGGGTGTTTGGAATAAAGAGTGGAATAGTGAGGAGTAAGACGTTACGAAGTCTTAGGGAGTGAATTCTTGGAGGCCCACAATATAAAGAGTTGATAAGATATAAAATTAATGTTTTCTAGTAGTGAGACCCACCAACTTCTTAGACCAAATACGGAGTAGAATTCATGAACTTGTACTTTCTATCTCCATGGGTAAACACACCCTTAAAGTTTACAAATCATATATATATAAATCTAAAATTTCAAAGACTAAACTTATAATTAAATTATATATAAATTTGTGTCCCTTAGACGTAAAGTTTTAAATCTACCTCTATGAAATGAAAGTTTAAGAACACATATTATATGCAATAGACGAAAATGAAGTTTAAAGACTAAATTTGTAATTTAATATAGATACATAGGTTTGAGTGGTGCAACAATGACGCAACTTTACCATGCCATGTATGGAGATGACGAACCAGAAGGCCTTATTTTGATGATTGCTTGGCTCCCATCTGCCATTTCATTAGCTTCCCTTCCATTCATTCGAATCATAAACACCATCAACCATCAACCACCAAGCCAACAACCTCAAACCATTCTATACCCTTCTTTACATATCCCTCGCCCTTGCCACTTCTCTCATTGCCATTACCATCCCTCAAACTAA ATGGCGGAGGCAGCGGCCGCGGGTTTCTTGCACAAGCTGTTAACCGGACGGTGGTTAATGCTATTCGCATCACTAACCATCATGGCAATGAACGGATCAGGCTACATGTTCGGGCTCTACTCCGCCCGCATCAAATCCATTTTTCGTTACGATCAGTCGGCTCTTAATTTTATCAGCTTCTTCAAGGACTTGGGTGGCAATCTTGGGGTGGTTTCCGGCCTCCTCTACGAGGTCGCACCACCGTGGCTGGTTCTCTCTGTTGGTGCCGTCCTCAACTTTTTCGCCTACTTCATGCTCTGGTCGGCGGTTTCTGGCCGGACCGCCGCACCGGGGCTGTGGTTGATGTGTGTTTATATGGGCGTTGCTGCTAACTCATTGTCTTTTGCTAATACGGCGGCTTTGGTTACTTGTGTTCGTAACTTTCCTCTTCATCGTGGCTGCCTTCTTAAAGGATACATAGGTTTGAGTGGTGCAACAATGACGCAACTTTACCATGCCATGTATGGAGATGACGAACCAGAAGGCCTTATTTTGATGATTGCTTGGCTCCCATCTGCCATTTCATTAGCTTCCCTTCCATTCATTCGAATCATAAACACCATCAACCATCAACCACCAAGCCAACAACCTCAAACCATTCTATACCCTTCTTTACATATCCCTCGCCCTTGCCACTTCTCTCATTGCCATTACCATCCCTCAAACTAA ATGGCGGAGGCAGCGGCCGCGGGTTTCTTGCACAAGCTGTTAACCGGACGGTGGTTAATGCTATTCGCATCACTAACCATCATGGCAATGAACGGATCAGGCTACATGTTCGGGCTCTACTCCGCCCGCATCAAATCCATTTTTCGTTACGATCAGTCGGCTCTTAATTTTATCAGCTTCTTCAAGGACTTGGGTGGCAATCTTGGGGTGGTTTCCGGCCTCCTCTACGAGGTCGCACCACCGTGGCTGGTTCTCTCTGTTGGTGCCGTCCTCAACTTTTTCGCCTACTTCATGCTCTGGTCGGCGGTTTCTGGCCGGACCGCCGCACCGGGGCTGTGGTTGATGTGTGTTTATATGGGCGTTGCTGCTAACTCATTGTCTTTTGCTAATACGGCGGCTTTGGTTACTTGTGTTCGTAACTTTCCTCTTCATCGTGGCTGCCTTCTTAAAGGATACATAGGTTTGAGTGGTGCAACAATGACGCAACTTTACCATGCCATGTATGGAGATGACGAACCAGAAGGCCTTATTTTGATGATTGCTTGGCTCCCATCTGCCATTTCATTAGCTTCCCTTCCATTCATTCGAATCATAAACACCATCAACCATCAACCACCAAGCCAACAACCTCAAACCATTCTATACCCTTCTTTACATATCCCTCGCCCTTGCCACTTCTCTCATTGCCATTACCATCCCTCAAACTAA MAEAAAAGFLHKLLTGRWLMLFASLTIMAMNGSGYMFGLYSARIKSIFRYDQSALNFISFFKDLGGNLGVVSGLLYEVAPPWLVLSVGAVLNFFAYFMLWSAVSGRTAAPGLWLMCVYMGVAANSLSFANTAALVTCVRNFPLHRGCLLKGYIGLSGATMTQLYHAMYGDDEPEGLILMIAWLPSAISLASLPFIRIINTINHQPPSQQPQTILYPSLHIPRPCHFSHCHYHPSN Homology
BLAST of HG10017962 vs. NCBI nr
Match: TYK05449.1 (protein NUCLEAR FUSION DEFECTIVE 4-like [Cucumis melo var. makuwa]) HSP 1 Score: 358.2 bits (918), Expect = 5.3e-95 Identity = 187/221 (84.62%), Postives = 195/221 (88.24%), Query Frame = 0
BLAST of HG10017962 vs. NCBI nr
Match: XP_004146405.3 (protein NUCLEAR FUSION DEFECTIVE 4 [Cucumis sativus] >KAE8649721.1 hypothetical protein Csa_011975 [Cucumis sativus]) HSP 1 Score: 351.3 bits (900), Expect = 6.5e-93 Identity = 183/221 (82.81%), Postives = 192/221 (86.88%), Query Frame = 0
BLAST of HG10017962 vs. NCBI nr
Match: KAA0034907.1 (protein NUCLEAR FUSION DEFECTIVE 4-like [Cucumis melo var. makuwa]) HSP 1 Score: 313.5 bits (802), Expect = 1.5e-81 Identity = 162/195 (83.08%), Postives = 171/195 (87.69%), Query Frame = 0
BLAST of HG10017962 vs. NCBI nr
Match: TKY62111.1 (NUCLEAR FUSION DEFECTIVE 4 [Spatholobus suberectus]) HSP 1 Score: 261.2 bits (666), Expect = 8.9e-66 Identity = 130/215 (60.47%), Postives = 162/215 (75.35%), Query Frame = 0
BLAST of HG10017962 vs. NCBI nr
Match: XP_020212347.1 (protein NUCLEAR FUSION DEFECTIVE 4 [Cajanus cajan] >KYP71016.1 putative transporter MCH1 [Cajanus cajan]) HSP 1 Score: 260.0 bits (663), Expect = 2.0e-65 Identity = 128/216 (59.26%), Postives = 162/216 (75.00%), Query Frame = 0
BLAST of HG10017962 vs. ExPASy Swiss-Prot
Match: F4I9E1 (Protein NUCLEAR FUSION DEFECTIVE 4 OS=Arabidopsis thaliana OX=3702 GN=NFD4 PE=3 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 9.1e-13 Identity = 50/181 (27.62%), Postives = 88/181 (48.62%), Query Frame = 0
BLAST of HG10017962 vs. ExPASy TrEMBL
Match: A0A5D3C4Y9 (Protein NUCLEAR FUSION DEFECTIVE 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold83G001510 PE=4 SV=1) HSP 1 Score: 358.2 bits (918), Expect = 2.6e-95 Identity = 187/221 (84.62%), Postives = 195/221 (88.24%), Query Frame = 0
BLAST of HG10017962 vs. ExPASy TrEMBL
Match: A0A0A0L178 (Nodulin-like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G507390 PE=4 SV=1) HSP 1 Score: 351.3 bits (900), Expect = 3.2e-93 Identity = 183/221 (82.81%), Postives = 192/221 (86.88%), Query Frame = 0
BLAST of HG10017962 vs. ExPASy TrEMBL
Match: A0A5A7T006 (Protein NUCLEAR FUSION DEFECTIVE 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold103G00360 PE=4 SV=1) HSP 1 Score: 313.5 bits (802), Expect = 7.3e-82 Identity = 162/195 (83.08%), Postives = 171/195 (87.69%), Query Frame = 0
BLAST of HG10017962 vs. ExPASy TrEMBL
Match: A0A151TVG0 (Putative transporter MCH1 OS=Cajanus cajan OX=3821 GN=KK1_010259 PE=4 SV=1) HSP 1 Score: 260.0 bits (663), Expect = 9.6e-66 Identity = 128/216 (59.26%), Postives = 162/216 (75.00%), Query Frame = 0
BLAST of HG10017962 vs. ExPASy TrEMBL
Match: A0A4D6MB20 (Nodulin-like domain-containing protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG6g2664 PE=4 SV=1) HSP 1 Score: 259.2 bits (661), Expect = 1.6e-65 Identity = 129/213 (60.56%), Postives = 161/213 (75.59%), Query Frame = 0
BLAST of HG10017962 vs. TAIR 10
Match: AT2G39210.1 (Major facilitator superfamily protein ) HSP 1 Score: 226.9 bits (577), Expect = 1.7e-59 Identity = 117/210 (55.71%), Postives = 146/210 (69.52%), Query Frame = 0
BLAST of HG10017962 vs. TAIR 10
Match: AT2G28120.1 (Major facilitator superfamily protein ) HSP 1 Score: 213.0 bits (541), Expect = 2.6e-55 Identity = 116/239 (48.54%), Postives = 149/239 (62.34%), Query Frame = 0
BLAST of HG10017962 vs. TAIR 10
Match: AT1G18940.1 (Nodulin-like / Major Facilitator Superfamily protein ) HSP 1 Score: 158.3 bits (399), Expect = 7.6e-39 Identity = 83/206 (40.29%), Postives = 131/206 (63.59%), Query Frame = 0
BLAST of HG10017962 vs. TAIR 10
Match: AT1G74780.1 (Nodulin-like / Major Facilitator Superfamily protein ) HSP 1 Score: 152.1 bits (383), Expect = 5.4e-37 Identity = 85/208 (40.87%), Postives = 126/208 (60.58%), Query Frame = 0
BLAST of HG10017962 vs. TAIR 10
Match: AT2G34355.1 (Major facilitator superfamily protein ) HSP 1 Score: 151.0 bits (380), Expect = 1.2e-36 Identity = 78/197 (39.59%), Postives = 124/197 (62.94%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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