HG10017961 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10017961
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	zinc finger CCCH domain-containing protein 36-like
Location	Chr03: 28109579 .. 28114603 (+)
RNA-Seq Expression	HG10017961
Synteny	HG10017961

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATATGCGCAAGCGAGGGAGGCCTGAAGCTTCCTTCAATTCTAATGGTGCCTTTAAGAAGCATAAGCAAGGTTCGTTTTTCTATTTTTAATTTTTAATTTTTTTTGTTTTTTTTTGTTCGTTCTTGCTTTTCTTTAAGTGGTAGTTCGATGCTTTGTCTCCTTCATTTCTACCACTACTTTATGCTTTTTCTGGTTGCTTATAGAAGGTAGGAGAGACAAATTATGTGTTTAGCTAGTGCTTTGTTTTCTGTTTGTTACTTTTGTTTGTTTTCTGAAGTTAGCTAGAAATGTTGCTTTTACTGTTTTACTGCTTCATCTCGCATTTGTTTCTATGGATCTTTGAGTTTTATTACAAGAAGTAGTGGCGCCATGTGTTCTAGGTCTGTGATCTACCCTTATGTTTGCGTTTGTTCCAATTCTATTTTACTTTTTTTTTTTTTTTTTGAACTAGAGATGACTGGAAATACTCCCTTAGCAAGTGGATCTGCTTCCAGTAATTGAAGACGGTTCTTGTTTGTAGGTTATGAGACTAAGGGTTGGTTATAACTAGTGGTGAAATTGGAAAGTGAGTAATTGGACGACTTTTAGAACTGTGTCTATTGGTGGTGAGTTTTGGGACCATGTGAGGATTTTTGGTCTCTATTGTCATTCTTTAACAAAGTGTCCATAGGGCTCAGTATAGAATTGTATTATTACGGCTAATTGAAGAGCCCTTTTCTTGTTCCCCATCACTTCTTTGTTTTTCATCAACATTCTCAACTCAACAGACCATGGTTTGGTCTCTCTCCACTCTTAATGCCTCATAATCCATTACTGCTTTATCCAGTAGCATGTTGGGAATGTTGATGAAAGACAAAGAATTGGGGAAGAAGATCGCTTGCTGGACACCTCTTGATGCAACTATTCTCCTCCTTTGACTAGAAGCTAACATTTCTAATGCTGCTTTAAATCCACTTTCTCTATTTATTGTGAACTTGAAATTATCGTCAAAAAGTCCCAATCAGTTCAATCTCTCCTTTTGTTATATTCTACGTTCTGCTGAAATCCTTATTCACGATTTGGGGGCTTTTAAGTTCAGTGATATGTTATTTTATCCCTTATTCTTGATTTTTACATGCAAGCCTTTTATCATGAGAAAGCATGTGGTTTTTAAAACTCGAGGATTGTTGTCCTTGTAACTTAGAAGAACTGGTCTACCATTCATCAAGGTTGCTAGTTATCCTGTTATTAGGTGACTAGCTCCTCAGCCTTCCGGCATATTTGAGTTGTATACACATTTTAGGAGATATGAGTTGAATATTGGAAAGGTCTGTTTTAAGAATTATGACTTTACGTCACGAACATTCCTAAATATCTTGTTCATTTGCTACGATATTTTTTCTTCAAGCAACAAGTGAGGGAAACAATTTCTTATATCATATTTATCTATGGACGAGGTACACTTGGGGTCAAGACAAAAGTTAAAAATTTTCTGGCAATAAGTTTATTACATCCTTAGGTCAGTCATTAGGGCTATAAAGAGGGCTTAGAGTGGAGGGTTAAAATATTTATCTAACATTGATGAGATTCAGTTCTAGGTGGGGTTTTCCCCCCCTTTTTCTGGTGTTGGGCCTTATTGTTTTTATAAGCCTAGGTAATCTCAAAATTCAACGGAGACAGTGGAAGTAACCCAATTCATATATTAAGAATGTTACCCTACAGTAACAGAAGGCTACAAATTATTTAGTAATTGTTTTAGTTGCCTAAATAATGTAAGTGTGAAGATGTATTAAAGTATTAGAGTAAAAATCTTAACAAATTATAACTGAGAAAGAATAATTAATGTTTTGCAACAGAACTGGAGTCCTTATCAACTGTAGGGAGCAAATCGAAGCCATGCACCAAGTTTTTCAGGTTCATATCTTACCTACCTAAATAAGTACTTGAACTGCATATTGTCTCTCCCTAATGATCTAAACTTGCTGTAAGTAAGATTTTAATTGATCATGAATTTCAAGATAAAGCTGAGTTATTGCGCTACTGAAAACTGGGAATGCAGGTATAAGTTATTACTCTAAGCCTTCAACCAAGTGAATAAGATTTTAAAACTAAACTTATTAATGAGTTTTAGAAAGTTGGATTTTTTCTCAATTATTACAAAATTCAGATGCCCCCCCTCTCTTTCTCTGTTTTCATTATATTTTGCACTGCACAAGAAATACGATCTCATGATTCTCATTTTCATTGTTTAAAACTTTGTTTGACCCGTTCTTTTTAATTTAGTTGATTATTATTTCCTTGTGGTCCAGTTCTATTTTACTGGCTGAAGTCCGTTGTTGCATTTATCTTTGTAATGAGGTTTCGAGCCTTAATTTGACTTATCTTCCTTTCATATTGTCAATCTTGTCACTATGTAATAGAAATGCCCCACCAAAAAAAAGATAAAAAAGAAAAAAAAGAGAAAATAAAAGACATGAGAAATATCATTTACATCTATTTTAAAACAAAATTTGGTTTTTTATGAAGGAATGGGGGAAAAAAATCAATTTATGCCTCTAAGACTAAGGGGTGTATTAATTAAAACCCTATAGTTATAATTGTATCAATTTAAACCCCTAAAATTAAGTGAATTAATTTATATCCTCTATCGGTGATTTATTAATATTTTCACTTATTTAATTTAAAATCAACTCAAAATTGGCTAAATAAATTTATTCTTCCAAAACCCAACTAGAGTCTAAAGAAAAATGATCACATCATTTTTCCTAAGTAATTAGAGAAAAATAATGGAAGAAGAAAATTTGAAACCACTTGTAAATAGTGGAAGTTGCAATTATCTATTCAATTATGTTAATCCTTAGATTTAAAGAAGTCTTATACATGCGTGGGAATTATCACATCATTCTTCTTTAGACTAACTATTAAAGGTTTCAAAATGGAATCCTAACGATGGGTTTGGGTCGATTCACTTATGAAAGTTTAGAGTTTAAATTGGTACAATTATTAGTTTGAGGTTTAAATTGGTATAATCCCAAGGCTTAAAGGTATAAATTGATTTGATCCAAAAAAAATATTAATGCAGTTTTCTTTGCATCTTTTGCCCTTCAAAACGAGTAAATGCCATTTCCTTTGATTTTTAATACCTCTAGGGTGGAAAGTATGGGTCGAGAGTATGGGTAGAAGGGGGTGAGGCTTACAAGTCCTTTCTATTCAACTGATGTTGAGTTGTTTGTTATGAGCTATGAGTTGTCTAATATTAATGGATCATGCTGATGGCATTTCCTTATCTTGGTATTTGTTGGAAATTCATGTCCTTCAATCTTTTTTTTTTCTGCTGTATAAATTATTGTAACCATGCATTTTTATACTTCTGAAAAGGAGATGGACTTCAATTTTATCTTGTCTGAGTAAAAATTGATTTTCAAATTGTTTGTGACGGTCTATTAAGTGCCTATAGTTTCAAATTTCTTGAATGGATTATACCACTTACTAACGTTTATTGTCTGTTTATCTCATGATAAGCAGTAAGTGTTAAGCTTATAAGATGTCTTCCTCCCAAGGTTCCAATTTTCTTATATGATAATAATTTGCCATGAGAGCCTCCTATTTTCTCTCTTGCTTGCAATTTGATTAAACTTTGATCCAGATGCCAAGATTTGGTTTGGGTTATTTGGTTCGCTTAAGCTTCTATTTGAGGTGTGACGGTTTGATCTGGTTACTTGATATGCTTTAAAGTGTTAGCAAGTTTATACTTGATACGCAGTCTAGCTCAGGAAACTAGGCTGGAAGTTGTTTAAAAACGAATTTCTGTTTTTAAGTATTAAAATAAAGTTTTAATATTGGATAACTTGTTTGTCAGGATAAATTTCTATCAGAATGAAAAGCGGTCGAACCTAGAAATAATATTTTATTGCCTTCTTGTGTTCCTTTGATGTTTTGTTAAATTTACCGTGCATATGATCATTATCTTGATCTAAATATGTTGTAGATTTAAATTAGTTTAGTAAACAAATGAATGAATGCCCAAAATTGAAGATCCTTACTGCCACAATCCATTGAGATTAAGCAATTCGCTGCTCTGATTCGTTAAAAAAAAAAAAAGAAAAAAAAGAATCTAAGATTGAAGATGTTTTAAGGATGCACCCGAGGATACAAATTGATAAGGATGCACCCAAGGATACAAATTGAAGATGTGTTTTACGTATTGCGGTTTGGAAGTTTGGTTGATCTTACAGTTGTGTTATTTATCATTTTTGGATTTCAGTACGGCTGGTTGTCCATTTGGTGAAAGCTGCCACTTCTTGCATTACGTTCCTGGTGGTTATAATGTTGTGGCTCAAATGATGAATCTCGCTCCTGTCGGTTCTCAACCATCTAGAAACATGGCTGCCCCACCTTCTGTCACCAACGGCGGGTCCTCTGCTCCGTCCCAAGTCAAAACTCGCATGTGCAACAAATACAACACTGCAGAAGGCTGCAAGTTTGGTGATAAATGCAACTTTGCCCATGGAGAGTGGGAACTTGGGAGGCCTAACCCTCCATCTCACGATAATCCCCGTGCCATAGGAGGAGGTGGAGGAGGAGGACATATGGGTGGTCGTATGGGTGGGCGAATGGACATGCCACCACCGGGTCCTGCTGCAAGCTTTGGTGCTTCAGCTACCGCAAAGATCAGTATAGATGCCTCACTTGCAGGAGCGATAATTGGCAAGGGTGGGATCAACTCCAAACAGATTTGTCGCCAAACGGGTGCGAAACTTTCCATCAGGGACCATGAATCGGATCCGAATCTGAGAAACATAGAACTGGAGGGCACTTTTGAGCAAATCAATGAAGCAAGTGCAATGGTGAGGGAGCTTATCATCACAGTTTCGATGGCAGGACCCGGTAAAGCATCTGGCGGGATGGGAGGAGGTCCTGTGCCTACCGGTAGCAACTATAAAACAAAGCTGTGTGATAATTTTGCAAAAGGTTCTTGTACTTTTGGTGAGAGATGCCATTTTGCGCACGGGGCTGCTGAATTACGCAAGTCCGGAGTATGA

mRNA sequence

ATGGATATGCGCAAGCGAGGGAGGCCTGAAGCTTCCTTCAATTCTAATGGTGCCTTTAAGAAGCATAAGCAAGTAAGTGTTAAGCTTATAAGATGTCTTCCTCCCAAGATGCCAAGATTTGGTTTGGGTTATTTGGTTCGCTTAAGCTTCTATTTGAGGTGTGACGGTTTGATCTGTACGGCTGGTTGTCCATTTGGTGAAAGCTGCCACTTCTTGCATTACGTTCCTGGTGGTTATAATGTTGTGGCTCAAATGATGAATCTCGCTCCTGTCGGTTCTCAACCATCTAGAAACATGGCTGCCCCACCTTCTGTCACCAACGGCGGGTCCTCTGCTCCGTCCCAAGTCAAAACTCGCATGTGCAACAAATACAACACTGCAGAAGGCTGCAAGTTTGGTGATAAATGCAACTTTGCCCATGGAGAGTGGGAACTTGGGAGGCCTAACCCTCCATCTCACGATAATCCCCGTGCCATAGGAGGAGGTGGAGGAGGAGGACATATGGGTGGTCGTATGGGTGGGCGAATGGACATGCCACCACCGGGTCCTGCTGCAAGCTTTGGTGCTTCAGCTACCGCAAAGATCAGTATAGATGCCTCACTTGCAGGAGCGATAATTGGCAAGGGTGGGATCAACTCCAAACAGATTTGTCGCCAAACGGGTGCGAAACTTTCCATCAGGGACCATGAATCGGATCCGAATCTGAGAAACATAGAACTGGAGGGCACTTTTGAGCAAATCAATGAAGCAAGTGCAATGGTGAGGGAGCTTATCATCACAGTTTCGATGGCAGGACCCGGTAAAGCATCTGGCGGGATGGGAGGAGGTCCTGTGCCTACCGGTAGCAACTATAAAACAAAGCTGTGTGATAATTTTGCAAAAGGTTCTTGTACTTTTGGTGAGAGATGCCATTTTGCGCACGGGGCTGCTGAATTACGCAAGTCCGGAGTATGA

Coding sequence (CDS)

ATGGATATGCGCAAGCGAGGGAGGCCTGAAGCTTCCTTCAATTCTAATGGTGCCTTTAAGAAGCATAAGCAAGTAAGTGTTAAGCTTATAAGATGTCTTCCTCCCAAGATGCCAAGATTTGGTTTGGGTTATTTGGTTCGCTTAAGCTTCTATTTGAGGTGTGACGGTTTGATCTGTACGGCTGGTTGTCCATTTGGTGAAAGCTGCCACTTCTTGCATTACGTTCCTGGTGGTTATAATGTTGTGGCTCAAATGATGAATCTCGCTCCTGTCGGTTCTCAACCATCTAGAAACATGGCTGCCCCACCTTCTGTCACCAACGGCGGGTCCTCTGCTCCGTCCCAAGTCAAAACTCGCATGTGCAACAAATACAACACTGCAGAAGGCTGCAAGTTTGGTGATAAATGCAACTTTGCCCATGGAGAGTGGGAACTTGGGAGGCCTAACCCTCCATCTCACGATAATCCCCGTGCCATAGGAGGAGGTGGAGGAGGAGGACATATGGGTGGTCGTATGGGTGGGCGAATGGACATGCCACCACCGGGTCCTGCTGCAAGCTTTGGTGCTTCAGCTACCGCAAAGATCAGTATAGATGCCTCACTTGCAGGAGCGATAATTGGCAAGGGTGGGATCAACTCCAAACAGATTTGTCGCCAAACGGGTGCGAAACTTTCCATCAGGGACCATGAATCGGATCCGAATCTGAGAAACATAGAACTGGAGGGCACTTTTGAGCAAATCAATGAAGCAAGTGCAATGGTGAGGGAGCTTATCATCACAGTTTCGATGGCAGGACCCGGTAAAGCATCTGGCGGGATGGGAGGAGGTCCTGTGCCTACCGGTAGCAACTATAAAACAAAGCTGTGTGATAATTTTGCAAAAGGTTCTTGTACTTTTGGTGAGAGATGCCATTTTGCGCACGGGGCTGCTGAATTACGCAAGTCCGGAGTATGA

Protein sequence

MDMRKRGRPEASFNSNGAFKKHKQVSVKLIRCLPPKMPRFGLGYLVRLSFYLRCDGLICTAGCPFGESCHFLHYVPGGYNVVAQMMNLAPVGSQPSRNMAAPPSVTNGGSSAPSQVKTRMCNKYNTAEGCKFGDKCNFAHGEWELGRPNPPSHDNPRAIGGGGGGGHMGGRMGGRMDMPPPGPAASFGASATAKISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASAMVRELIITVSMAGPGKASGGMGGGPVPTGSNYKTKLCDNFAKGSCTFGERCHFAHGAAELRKSGV

Homology

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BLAST of HG10017961 vs. NCBI nr
Match: XP_008442098.1 (PREDICTED: zinc finger CCCH domain-containing protein 36-like [Cucumis melo])

HSP 1 Score: 546.2 bits (1406), Expect = 1.9e-151
Identity = 276/319 (86.52%), Postives = 283/319 (88.71%), Query Frame = 0


Query: 1   MDMRKRGRPEASFNSNGAFKKHKQVSVKLIRCLPPKMPRFGLGYLVRLSFYLRCDGLICT 60
           MDMRKRGRPEA+FNSNG+FKKHKQ    L        P               C     T
Sbjct: 1   MDMRKRGRPEAAFNSNGSFKKHKQELESLSTVGSKSKP---------------CTKFFST 60

Query: 61  AGCPFGESCHFLHYVPGGYNVVAQMMNLAPVGSQPSRNMAAPPSVTNGGSSAPSQVKTRM 120
           AGCPFGESCHFLHYVPGGYNVVAQMMNLAPVG+QPSRN+AAPPSVTNGGSSAPSQVKTRM
Sbjct: 61  AGCPFGESCHFLHYVPGGYNVVAQMMNLAPVGAQPSRNVAAPPSVTNGGSSAPSQVKTRM 120

Query: 121 CNKYNTAEGCKFGDKCNFAHGEWELGRPNPPSHDNPRAIGGGGGGG--HMGGRMGGRMDM 180
           CNK+NTAEGCKFGDKCNFAHGEWELGRPNPPSHDNPRA+GGGGGGG  HM GRMGGRMD+
Sbjct: 121 CNKFNTAEGCKFGDKCNFAHGEWELGRPNPPSHDNPRAMGGGGGGGGVHMVGRMGGRMDL 180

Query: 181 PPPGPAASFGASATAKISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNI 240
           PPPGPAASFGASATAKISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNI
Sbjct: 181 PPPGPAASFGASATAKISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNI 240

Query: 241 ELEGTFEQINEASAMVRELIITVSMAGPGKASGGMGGGPVPTGSNYKTKLCDNFAKGSCT 300
           ELEGTFEQINEASAMVRELIITVSMAGPGKASGGMGGGP PTGSNYKTKLCDNFAKGSCT
Sbjct: 241 ELEGTFEQINEASAMVRELIITVSMAGPGKASGGMGGGPAPTGSNYKTKLCDNFAKGSCT 300

Query: 301 FGERCHFAHGAAELRKSGV 318
           FGERCHFAHGAAELRKSGV
Sbjct: 301 FGERCHFAHGAAELRKSGV 304

[Close]

BLAST of HG10017961 vs. NCBI nr
Match: XP_004146386.1 (zinc finger CCCH domain-containing protein 31 [Cucumis sativus] >KGN54808.1 hypothetical protein Csa_012532 [Cucumis sativus])

HSP 1 Score: 545.4 bits (1404), Expect = 3.2e-151
Identity = 276/320 (86.25%), Postives = 282/320 (88.12%), Query Frame = 0


Query: 1   MDMRKRGRPEASFNSNGAFKKHKQVSVKLIRCLPPKMPRFGLGYLVRLSFYLRCDGLICT 60
           MDMRKRGRPEA+FNSNG+FKKHKQ    L        P               C     T
Sbjct: 1   MDMRKRGRPEAAFNSNGSFKKHKQELESLSTVGSKSKP---------------CTKFFST 60

Query: 61  AGCPFGESCHFLHYVPGGYNVVAQMMNLAPVGSQPSRNMAAPPSVTNGGSSAPSQVKTRM 120
           AGCPFGESCHFLHYVPGGYNVVAQMMNLAPVG+QPSRN+AAPPSVTNGG SAPSQVKTRM
Sbjct: 61  AGCPFGESCHFLHYVPGGYNVVAQMMNLAPVGAQPSRNIAAPPSVTNGGPSAPSQVKTRM 120

Query: 121 CNKYNTAEGCKFGDKCNFAHGEWELGRPNPPSHDNPRAIGGGGGGG---HMGGRMGGRMD 180
           CNKYNTAEGCKFGDKCNFAHGEWELGRPNPPSHDNPRA+GGGGGGG   HM GRMGGRMD
Sbjct: 121 CNKYNTAEGCKFGDKCNFAHGEWELGRPNPPSHDNPRAMGGGGGGGGGVHMVGRMGGRMD 180

Query: 181 MPPPGPAASFGASATAKISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRN 240
           +PPPGPAASFGASATAKISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRN
Sbjct: 181 LPPPGPAASFGASATAKISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRN 240

Query: 241 IELEGTFEQINEASAMVRELIITVSMAGPGKASGGMGGGPVPTGSNYKTKLCDNFAKGSC 300
           IELEGTFEQINEASAMVRELIITVSMAGPGKASGGMGGGP PTGSNYKTKLCDNFAKGSC
Sbjct: 241 IELEGTFEQINEASAMVRELIITVSMAGPGKASGGMGGGPAPTGSNYKTKLCDNFAKGSC 300

Query: 301 TFGERCHFAHGAAELRKSGV 318
           TFGERCHFAHGAAELRKSGV
Sbjct: 301 TFGERCHFAHGAAELRKSGV 305

[Close]

BLAST of HG10017961 vs. NCBI nr
Match: XP_038882544.1 (zinc finger CCCH domain-containing protein 31 [Benincasa hispida])

HSP 1 Score: 538.9 bits (1387), Expect = 3.0e-149
Identity = 272/317 (85.80%), Postives = 278/317 (87.70%), Query Frame = 0


Query: 1   MDMRKRGRPEASFNSNGAFKKHKQVSVKLIRCLPPKMPRFGLGYLVRLSFYLRCDGLICT 60
           MDMRKRGRP+A+FN+NGAFKKHKQ    L        P               C     T
Sbjct: 1   MDMRKRGRPDAAFNTNGAFKKHKQELESLSTVGSKSKP---------------CTKFFST 60

Query: 61  AGCPFGESCHFLHYVPGGYNVVAQMMNLAPVGSQPSRNMAAPPSVTNGGSSAPSQVKTRM 120
           AGCPFGESCHFLHYVPGGYNVVAQMMNLAPVGSQPSRNM APP VTNGGSSAPSQVK+RM
Sbjct: 61  AGCPFGESCHFLHYVPGGYNVVAQMMNLAPVGSQPSRNMPAPP-VTNGGSSAPSQVKSRM 120

Query: 121 CNKYNTAEGCKFGDKCNFAHGEWELGRPNPPSHDNPRAIGGGGGGGHMGGRMGGRMDMPP 180
           CNKYNTAEGCKFGDKCNFAHGEWELGRPNPPSHDNPRA+GGGGGGGHM GRMGGRMD+PP
Sbjct: 121 CNKYNTAEGCKFGDKCNFAHGEWELGRPNPPSHDNPRAMGGGGGGGHMVGRMGGRMDLPP 180

Query: 181 PGPAASFGASATAKISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIEL 240
           PGPAASFGASATAKISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHE DPNLRNIEL
Sbjct: 181 PGPAASFGASATAKISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHELDPNLRNIEL 240

Query: 241 EGTFEQINEASAMVRELIITVSMAGPGKASGGMGGGPVPTGSNYKTKLCDNFAKGSCTFG 300
           EGTFEQINEASAMVRELIITVSM GPGKA GGMGGGP PTGSNYKTKLCDNFAKGSCTFG
Sbjct: 241 EGTFEQINEASAMVRELIITVSMTGPGKAPGGMGGGPAPTGSNYKTKLCDNFAKGSCTFG 300

Query: 301 ERCHFAHGAAELRKSGV 318
           ERCHFAHGAAELRKSGV
Sbjct: 301 ERCHFAHGAAELRKSGV 301

[Close]

BLAST of HG10017961 vs. NCBI nr
Match: XP_023545090.1 (zinc finger CCCH domain-containing protein 31-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 513.1 bits (1320), Expect = 1.7e-141
Identity = 264/318 (83.02%), Postives = 272/318 (85.53%), Query Frame = 0


Query: 1   MDMRKRGRPEASFNSNGAFKKHKQVSVKLIRCLPPKMPRFGLGYLVRLSFYLRCDGLICT 60
           MDMRKRGRPEA+FNSNG+FKKHKQ    L        P               C     T
Sbjct: 1   MDMRKRGRPEAAFNSNGSFKKHKQELESLSTVGGKSKP---------------CTKFFST 60

Query: 61  AGCPFGESCHFLHYVPGGYNVVAQMMNLAPVGSQPSRNMAAPPSVTNGGSSAPSQVKTRM 120
           AGCPFGESCHFLHYVPGGYN VAQMMNLAPVGSQPSRNMAAPP VTNGGSSAPSQ+KTRM
Sbjct: 61  AGCPFGESCHFLHYVPGGYNAVAQMMNLAPVGSQPSRNMAAPP-VTNGGSSAPSQIKTRM 120

Query: 121 CNKYNTAEGCKFGDKCNFAHGEWELGRPNPPSHDNPRAIGGGGGGGHMGGRMGGRMDMPP 180
           CNK+N+AEGCKFGDKCNFAHGEWELGRP PPSHDNPR     G GGHM GRMGGRMD+PP
Sbjct: 121 CNKFNSAEGCKFGDKCNFAHGEWELGRPTPPSHDNPR-----GMGGHMVGRMGGRMDLPP 180

Query: 181 PGPAASFGASATAKISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIEL 240
           PGPAASFGASATAKISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIEL
Sbjct: 181 PGPAASFGASATAKISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIEL 240

Query: 241 EGTFEQINEASAMVRELIITVSMAGPGKASGGM-GGGPVPTGSNYKTKLCDNFAKGSCTF 300
           EGTFEQINEASAMVRELIITVSM+GPGKA G M GGGP P+GSNYKTKLCDNFAKGSCTF
Sbjct: 241 EGTFEQINEASAMVRELIITVSMSGPGKAHGAMGGGGPAPSGSNYKTKLCDNFAKGSCTF 297

Query: 301 GERCHFAHGAAELRKSGV 318
           GERCHFAHGAAELRKSGV
Sbjct: 301 GERCHFAHGAAELRKSGV 297

[Close]

BLAST of HG10017961 vs. NCBI nr
Match: XP_022967865.1 (zinc finger CCCH domain-containing protein 31 [Cucurbita maxima])

HSP 1 Score: 510.8 bits (1314), Expect = 8.7e-141
Identity = 263/318 (82.70%), Postives = 273/318 (85.85%), Query Frame = 0


Query: 1   MDMRKRGRPEASFNSNGAFKKHKQVSVKLIRCLPPKMPRFGLGYLVRLSFYLRCDGLICT 60
           MDMRKRGRPEA+FNSNG+FKKHKQ    L        P               C     T
Sbjct: 1   MDMRKRGRPEAAFNSNGSFKKHKQELESLSTVGGKSKP---------------CTKFFST 60

Query: 61  AGCPFGESCHFLHYVPGGYNVVAQMMNLAPVGSQPSRNMAAPPSVTNGGSSAPSQVKTRM 120
           AGCPFGESCHFLHYVPGGYN VAQMMNLAPVGSQPSRNMAAPP V+NGGSSAPSQ+KTRM
Sbjct: 61  AGCPFGESCHFLHYVPGGYNAVAQMMNLAPVGSQPSRNMAAPP-VSNGGSSAPSQIKTRM 120

Query: 121 CNKYNTAEGCKFGDKCNFAHGEWELGRPNPPSHDNPRAIGGGGGGGHMGGRMGGRMDMPP 180
           CNK+N+AEGCKFGDKCNFAHGEWELGRP PPSHDNPR    G GGGHM GRMGGRMD+PP
Sbjct: 121 CNKFNSAEGCKFGDKCNFAHGEWELGRPTPPSHDNPR----GMGGGHMVGRMGGRMDLPP 180

Query: 181 PGPAASFGASATAKISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIEL 240
           PGPAASFGASATAKISIDASLAGAIIGKGGINSKQICRQTGAKLSIRD+ESDPNLRNIEL
Sbjct: 181 PGPAASFGASATAKISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDNESDPNLRNIEL 240

Query: 241 EGTFEQINEASAMVRELIITVSMAGPGKASGGM-GGGPVPTGSNYKTKLCDNFAKGSCTF 300
           EGTFEQINEASAMVRELIITVSM+GPGKA G M GGGP P+GSNYKTKLCDNFAKGSCTF
Sbjct: 241 EGTFEQINEASAMVRELIITVSMSGPGKAHGAMGGGGPAPSGSNYKTKLCDNFAKGSCTF 298

Query: 301 GERCHFAHGAAELRKSGV 318
           GERCHFAHGAAELRKSGV
Sbjct: 301 GERCHFAHGAAELRKSGV 298

[Close]

BLAST of HG10017961 vs. ExPASy Swiss-Prot
Match: Q7XPK1 (Zinc finger CCCH domain-containing protein 31 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0665700 PE=2 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 9.5e-82
Identity = 175/324 (54.01%), Postives = 203/324 (62.65%), Query Frame = 0


Query: 4   RKRGRPEASFNSNGAFKKHKQVSVKLIRCLPPKMPRFGLGYLVRLSFYLRCDGLICTAGC 63
           RKR RP+ +       K+ ++               F  G   +L     C     T GC
Sbjct: 8   RKRSRPDTANGGAAGGKRSRETE------------SFQTGLSSKLK---PCTKFFSTIGC 67

Query: 64  PFGESCHFLHYVPGGYNVVAQMMNLA-PVGSQPSRNMAAPPSVTNGGSSAP-SQVKTRMC 123
           PFGE CHF H+VPGGY  VA+ +NL  P    P+R   AP     GG+S P S  KTRMC
Sbjct: 68  PFGEGCHFSHFVPGGYQAVAKTLNLGNPAVPAPAR---APMDHAAGGNSHPASSGKTRMC 127

Query: 124 NKYNTAEGCKFGDKCNFAHGEWELGRPNPPSHDNPRAIGGGGGGGHMGGRMGGRMDMPPP 183
            KYNTAEGCKFGDKC+FAHGE ELG+P   SH++  A         MGGR GGR + PPP
Sbjct: 128 TKYNTAEGCKFGDKCHFAHGERELGKPAYMSHESAMA-------PPMGGRYGGRPEPPPP 187

Query: 184 G----PAASFGASATAKISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRN 243
                PA +FGASATAKIS+DASLAG IIGKGG+N+KQICR TG KLSIRDHESD NL+N
Sbjct: 188 AAMGPPAGNFGASATAKISVDASLAGGIIGKGGVNTKQICRVTGVKLSIRDHESDSNLKN 247

Query: 244 IELEGTFEQINEASAMVRELIITVSMAGPGKASGGMGGGPVPTG-------SNYKTKLCD 303
           IELEG F+QI +AS MV ELI T+S + P K   G   G  P G       SNYKTKLC+
Sbjct: 248 IELEGNFDQIKQASNMVGELIATISPSTPAKKPAGSAAGAAPAGRGGPGGRSNYKTKLCE 306

Query: 304 NFAKGSCTFGERCHFAHGAAELRK 315
           NF KG+CTFG+RCHFAHG  E RK
Sbjct: 308 NFVKGTCTFGDRCHFAHGENEQRK 306

[Close]

BLAST of HG10017961 vs. ExPASy Swiss-Prot
Match: Q7F8R0 (Zinc finger CCCH domain-containing protein 14 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0194200 PE=2 SV=1)

HSP 1 Score: 287.7 bits (735), Expect = 1.6e-76
Identity = 176/323 (54.49%), Postives = 206/323 (63.78%), Query Frame = 0


Query: 4   RKRGRPEASFNSNGAFKKHKQVSVKLIRCLPPKMPRFGLGYLVRLSFYLRCDGLICTAGC 63
           RKRG+P+    +NGA  K  + S            + G+G     S    C     T+GC
Sbjct: 6   RKRGKPD---GANGAGGKRARESESF---------QTGVG-----SKSKPCTKFFSTSGC 65

Query: 64  PFGESCHFLHYVPGGYNVVAQMMNL-APVGSQPSRNMAAPPSVTNGGSSAPSQVKTRMCN 123
           PFGE CHFLH+ PGGY  VA+M NL  P  + P   M    +V +G  +    VKTR+CN
Sbjct: 66  PFGEGCHFLHHFPGGYQAVAKMTNLGGPAIAPPPGRMPMGNAVPDGPPT--PTVKTRLCN 125

Query: 124 KYNTAEGCKFGDKCNFAHGEWELGRPNPPSHDNPRAIGGGGGGGHMGGRMGGRMDMPP-P 183
           KYNTAEGCK+GDKC+FAHGE ELG+P       P           MG R  G    PP P
Sbjct: 126 KYNTAEGCKWGDKCHFAHGERELGKPMLMDSSMPPP---------MGPRPTGHFAPPPMP 185

Query: 184 GPA----ASFGASATAKISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRN 243
            PA    ASFGASATAKIS+DASLAG IIG+GG+N+KQI R TGAKL+IRDHESD NL+N
Sbjct: 186 SPAMSTPASFGASATAKISVDASLAGGIIGRGGVNTKQISRVTGAKLAIRDHESDTNLKN 245

Query: 244 IELEGTFEQINEASAMVRELIITVSMAGP---GKASGG--MGGGPVPTGSNYKTKLCDNF 303
           IELEGTF+QI  ASAMVRELI+++    P    K  GG   GGGP   GSN+KTKLC+NF
Sbjct: 246 IELEGTFDQIKNASAMVRELIVSIGGGAPPQGKKPVGGSHRGGGP---GSNFKTKLCENF 297

Query: 304 AKGSCTFGERCHFAHGAAELRKS 316
            KGSCTFG+RCHFAHG  ELRKS
Sbjct: 306 TKGSCTFGDRCHFAHGENELRKS 297

[Close]

BLAST of HG10017961 vs. ExPASy Swiss-Prot
Match: Q69XQ3 (Zinc finger CCCH domain-containing protein 44 OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0618100 PE=2 SV=1)

HSP 1 Score: 271.6 bits (693), Expect = 1.2e-71
Identity = 152/268 (56.72%), Postives = 175/268 (65.30%), Query Frame = 0


Query: 54  CDGLICTAGCPFGESCHFLHYVPGGYNVVAQMMNLAPVGSQPSRNMAAPPSVTNGGSSAP 113
           C     T+GCPFG SCHFLH  PGGY   A+M       S     +AAPP     G  AP
Sbjct: 38  CTKFFSTSGCPFGSSCHFLHNFPGGYQAAAKMT------SHGGTAVAAPPGRMPLGPGAP 97

Query: 114 -----SQVKTRMCNKYNTAEGCKFGDKCNFAHGEWELGRPNPPSHDNPRAIGGGGGGGHM 173
                S VKTRMCNKYNTAEGCK+G KC+FAHGE ELG+P    +  P           M
Sbjct: 98  NGPPTSSVKTRMCNKYNTAEGCKWGSKCHFAHGERELGKPMLLDNSMPHP---------M 157

Query: 174 GGRMGGRMDMPPPG--PAASFGASATAKISIDASLAGAIIGKGGINSKQICRQTGAKLSI 233
           G        MP P   P ++FGASATAKIS+DASLAG IIGKGG N+K I R TGAKL+I
Sbjct: 158 GSMPFEAPPMPGPDIVPPSTFGASATAKISVDASLAGGIIGKGGTNTKHISRMTGAKLAI 217

Query: 234 RDHESDPNLRNIELEGTFEQINEASAMVRELIITVSMAGPGKASGGMGGGPVPTGSNYKT 293
           RD+ES+PNL+NIELEGTF+QI  ASAMV ELI+ +S   P   + G G      GSN+KT
Sbjct: 218 RDNESNPNLKNIELEGTFDQIKHASAMVTELIVRISGNAPPAKNPGRGSHAGGPGSNFKT 277

Query: 294 KLCDNFAKGSCTFGERCHFAHGAAELRK 315
           KLC+NF KGSCTFG+RCHFAHG +ELRK
Sbjct: 278 KLCENFNKGSCTFGDRCHFAHGESELRK 290

[Close]

BLAST of HG10017961 vs. ExPASy Swiss-Prot
Match: Q9FG30 (Zinc finger CCCH domain-containing protein 52 OS=Arabidopsis thaliana OX=3702 GN=At5g06770 PE=1 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 3.6e-65
Identity = 157/319 (49.22%), Postives = 180/319 (56.43%), Query Frame = 0


Query: 1   MDMRKRGRPE--ASFNSNGAFKKHKQVSVKLIRCLPPKMPRFGLGYLVRLSFYLRCDGLI 60
           MD RKRGRPE  AS NSNG FK+ KQ    +           GLG     S    C    
Sbjct: 1   MDARKRGRPEAAASHNSNGGFKRSKQEMESI---------STGLG-----SKSKPCTKFF 60

Query: 61  CTAGCPFGESCHFLHYVPGGYNVVAQMMNLAPVGSQPSRNMAAPPSVTNGGSSAPSQVKT 120
            T+GCPFG++CHFLHYVPGGYN  AQM NL P  SQ SRNM                   
Sbjct: 61  STSGCPFGDNCHFLHYVPGGYNAAAQMTNLRPPVSQVSRNMQ------------------ 120

Query: 121 RMCNKYNTAEGCKFGDKCNFAHGEWELGRPNPPSHDNPRAIGGGGGGGHMGGRMGGRMDM 180
                                                        G G  GGR  GR D 
Sbjct: 121 ---------------------------------------------GSGGPGGRFSGRGD- 180

Query: 181 PPPGPAASFGASATAKISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNI 240
           P  GP + FGAS T+KIS+DASLAGAIIGKGGI+SKQICR+TGAKLSI+DHE DPNL+ I
Sbjct: 181 PGSGPVSIFGAS-TSKISVDASLAGAIIGKGGIHSKQICRETGAKLSIKDHERDPNLKII 239

Query: 241 ELEGTFEQINEASAMVRELIITVSMAGPGKASGGMGGGPVPTGSNYKTKLCDNFAKGSCT 300
           ELEGTFEQIN AS MVRELI  +      +  GG  G P P GSNYKTK+CD ++KG+CT
Sbjct: 241 ELEGTFEQINVASGMVRELIGRLGSVKKPQGIGGPEGKPHP-GSNYKTKICDRYSKGNCT 239

Query: 301 FGERCHFAHGAAELRKSGV 318
           +G+RCHFAHG +ELR+SG+
Sbjct: 301 YGDRCHFAHGESELRRSGI 239

[Close]

BLAST of HG10017961 vs. ExPASy Swiss-Prot
Match: Q9C7C3 (Zinc finger CCCH domain-containing protein 36 OS=Arabidopsis thaliana OX=3702 GN=At3g12130 PE=2 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 3.4e-63
Identity = 156/329 (47.42%), Postives = 184/329 (55.93%), Query Frame = 0


Query: 1   MDMRKRGRPEA-SFNSN-GAFKKHKQVSVKLIRCLPPKMPRF--GLGYLVRLSFYLRCDG 60
           MD RKRGRPEA SFNSN G +KK KQ           +M  +  GLG     S    C  
Sbjct: 1   MDTRKRGRPEAGSFNSNGGGYKKSKQ-----------EMESYSTGLG-----SKSKPCTK 60

Query: 61  LICTAGCPFGESCHFLHYVPGGYNVVAQMMNLAPVGSQPSRNMAAPPSVTNGGSSAPSQV 120
              T+GCPFGE+CHFLHYVPGGYN V+QM N+ P   Q SRNM                 
Sbjct: 61  FFSTSGCPFGENCHFLHYVPGGYNAVSQMTNMGPPIPQVSRNMQ---------------- 120

Query: 121 KTRMCNKYNTAEGCKFGDKCNFAHGEWELGRPNPPSHDNPRAIGGGGGGGHMGGRMGGRM 180
                                                       G G GG   GR     
Sbjct: 121 --------------------------------------------GSGNGGRFSGR----- 180

Query: 181 DMPPPGPAASFGASATAKISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLR 240
               PG  ++FG SATA+ S+DASLAGAIIGKGG++SKQICRQTG KLSI+DHE DPNL+
Sbjct: 181 GESGPGHVSNFGDSATARFSVDASLAGAIIGKGGVSSKQICRQTGVKLSIQDHERDPNLK 240

Query: 241 NIELEGTFEQINEASAMVRELIITVSMAGPGKASGGMGGG--------PVPTGSNYKTKL 300
           NI LEGT EQI+EASAMV++LI  ++ A      GG+GGG        P P GSN+KTK+
Sbjct: 241 NIVLEGTLEQISEASAMVKDLIGRLNSAAKKPPGGGLGGGGGMGSEGKPHP-GSNFKTKI 247

Query: 301 CDNFAKGSCTFGERCHFAHGAAELRKSGV 318
           C+ F+KG+CTFG+RCHFAHG AELRKSG+
Sbjct: 301 CERFSKGNCTFGDRCHFAHGEAELRKSGI 247

[Close]

BLAST of HG10017961 vs. ExPASy TrEMBL
Match: A0A1S3B4W9 (zinc finger CCCH domain-containing protein 36-like OS=Cucumis melo OX=3656 GN=LOC103486060 PE=4 SV=1)

HSP 1 Score: 546.2 bits (1406), Expect = 9.0e-152
Identity = 276/319 (86.52%), Postives = 283/319 (88.71%), Query Frame = 0


Query: 1   MDMRKRGRPEASFNSNGAFKKHKQVSVKLIRCLPPKMPRFGLGYLVRLSFYLRCDGLICT 60
           MDMRKRGRPEA+FNSNG+FKKHKQ    L        P               C     T
Sbjct: 1   MDMRKRGRPEAAFNSNGSFKKHKQELESLSTVGSKSKP---------------CTKFFST 60

Query: 61  AGCPFGESCHFLHYVPGGYNVVAQMMNLAPVGSQPSRNMAAPPSVTNGGSSAPSQVKTRM 120
           AGCPFGESCHFLHYVPGGYNVVAQMMNLAPVG+QPSRN+AAPPSVTNGGSSAPSQVKTRM
Sbjct: 61  AGCPFGESCHFLHYVPGGYNVVAQMMNLAPVGAQPSRNVAAPPSVTNGGSSAPSQVKTRM 120

Query: 121 CNKYNTAEGCKFGDKCNFAHGEWELGRPNPPSHDNPRAIGGGGGGG--HMGGRMGGRMDM 180
           CNK+NTAEGCKFGDKCNFAHGEWELGRPNPPSHDNPRA+GGGGGGG  HM GRMGGRMD+
Sbjct: 121 CNKFNTAEGCKFGDKCNFAHGEWELGRPNPPSHDNPRAMGGGGGGGGVHMVGRMGGRMDL 180

Query: 181 PPPGPAASFGASATAKISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNI 240
           PPPGPAASFGASATAKISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNI
Sbjct: 181 PPPGPAASFGASATAKISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNI 240

Query: 241 ELEGTFEQINEASAMVRELIITVSMAGPGKASGGMGGGPVPTGSNYKTKLCDNFAKGSCT 300
           ELEGTFEQINEASAMVRELIITVSMAGPGKASGGMGGGP PTGSNYKTKLCDNFAKGSCT
Sbjct: 241 ELEGTFEQINEASAMVRELIITVSMAGPGKASGGMGGGPAPTGSNYKTKLCDNFAKGSCT 300

Query: 301 FGERCHFAHGAAELRKSGV 318
           FGERCHFAHGAAELRKSGV
Sbjct: 301 FGERCHFAHGAAELRKSGV 304

[Close]

BLAST of HG10017961 vs. ExPASy TrEMBL
Match: A0A0A0KZ79 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G507380 PE=4 SV=1)

HSP 1 Score: 545.4 bits (1404), Expect = 1.5e-151
Identity = 276/320 (86.25%), Postives = 282/320 (88.12%), Query Frame = 0


Query: 1   MDMRKRGRPEASFNSNGAFKKHKQVSVKLIRCLPPKMPRFGLGYLVRLSFYLRCDGLICT 60
           MDMRKRGRPEA+FNSNG+FKKHKQ    L        P               C     T
Sbjct: 1   MDMRKRGRPEAAFNSNGSFKKHKQELESLSTVGSKSKP---------------CTKFFST 60

Query: 61  AGCPFGESCHFLHYVPGGYNVVAQMMNLAPVGSQPSRNMAAPPSVTNGGSSAPSQVKTRM 120
           AGCPFGESCHFLHYVPGGYNVVAQMMNLAPVG+QPSRN+AAPPSVTNGG SAPSQVKTRM
Sbjct: 61  AGCPFGESCHFLHYVPGGYNVVAQMMNLAPVGAQPSRNIAAPPSVTNGGPSAPSQVKTRM 120

Query: 121 CNKYNTAEGCKFGDKCNFAHGEWELGRPNPPSHDNPRAIGGGGGGG---HMGGRMGGRMD 180
           CNKYNTAEGCKFGDKCNFAHGEWELGRPNPPSHDNPRA+GGGGGGG   HM GRMGGRMD
Sbjct: 121 CNKYNTAEGCKFGDKCNFAHGEWELGRPNPPSHDNPRAMGGGGGGGGGVHMVGRMGGRMD 180

Query: 181 MPPPGPAASFGASATAKISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRN 240
           +PPPGPAASFGASATAKISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRN
Sbjct: 181 LPPPGPAASFGASATAKISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRN 240

Query: 241 IELEGTFEQINEASAMVRELIITVSMAGPGKASGGMGGGPVPTGSNYKTKLCDNFAKGSC 300
           IELEGTFEQINEASAMVRELIITVSMAGPGKASGGMGGGP PTGSNYKTKLCDNFAKGSC
Sbjct: 241 IELEGTFEQINEASAMVRELIITVSMAGPGKASGGMGGGPAPTGSNYKTKLCDNFAKGSC 300

Query: 301 TFGERCHFAHGAAELRKSGV 318
           TFGERCHFAHGAAELRKSGV
Sbjct: 301 TFGERCHFAHGAAELRKSGV 305

[Close]

BLAST of HG10017961 vs. ExPASy TrEMBL
Match: A0A6J1HVM0 (zinc finger CCCH domain-containing protein 31 OS=Cucurbita maxima OX=3661 GN=LOC111467244 PE=4 SV=1)

HSP 1 Score: 510.8 bits (1314), Expect = 4.2e-141
Identity = 263/318 (82.70%), Postives = 273/318 (85.85%), Query Frame = 0


Query: 1   MDMRKRGRPEASFNSNGAFKKHKQVSVKLIRCLPPKMPRFGLGYLVRLSFYLRCDGLICT 60
           MDMRKRGRPEA+FNSNG+FKKHKQ    L        P               C     T
Sbjct: 1   MDMRKRGRPEAAFNSNGSFKKHKQELESLSTVGGKSKP---------------CTKFFST 60

Query: 61  AGCPFGESCHFLHYVPGGYNVVAQMMNLAPVGSQPSRNMAAPPSVTNGGSSAPSQVKTRM 120
           AGCPFGESCHFLHYVPGGYN VAQMMNLAPVGSQPSRNMAAPP V+NGGSSAPSQ+KTRM
Sbjct: 61  AGCPFGESCHFLHYVPGGYNAVAQMMNLAPVGSQPSRNMAAPP-VSNGGSSAPSQIKTRM 120

Query: 121 CNKYNTAEGCKFGDKCNFAHGEWELGRPNPPSHDNPRAIGGGGGGGHMGGRMGGRMDMPP 180
           CNK+N+AEGCKFGDKCNFAHGEWELGRP PPSHDNPR    G GGGHM GRMGGRMD+PP
Sbjct: 121 CNKFNSAEGCKFGDKCNFAHGEWELGRPTPPSHDNPR----GMGGGHMVGRMGGRMDLPP 180

Query: 181 PGPAASFGASATAKISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIEL 240
           PGPAASFGASATAKISIDASLAGAIIGKGGINSKQICRQTGAKLSIRD+ESDPNLRNIEL
Sbjct: 181 PGPAASFGASATAKISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDNESDPNLRNIEL 240

Query: 241 EGTFEQINEASAMVRELIITVSMAGPGKASGGM-GGGPVPTGSNYKTKLCDNFAKGSCTF 300
           EGTFEQINEASAMVRELIITVSM+GPGKA G M GGGP P+GSNYKTKLCDNFAKGSCTF
Sbjct: 241 EGTFEQINEASAMVRELIITVSMSGPGKAHGAMGGGGPAPSGSNYKTKLCDNFAKGSCTF 298

Query: 301 GERCHFAHGAAELRKSGV 318
           GERCHFAHGAAELRKSGV
Sbjct: 301 GERCHFAHGAAELRKSGV 298

[Close]

BLAST of HG10017961 vs. ExPASy TrEMBL
Match: A0A6J1ESD4 (zinc finger CCCH domain-containing protein 14-like OS=Cucurbita moschata OX=3662 GN=LOC111435541 PE=4 SV=1)

HSP 1 Score: 510.0 bits (1312), Expect = 7.2e-141
Identity = 262/318 (82.39%), Postives = 271/318 (85.22%), Query Frame = 0


Query: 1   MDMRKRGRPEASFNSNGAFKKHKQVSVKLIRCLPPKMPRFGLGYLVRLSFYLRCDGLICT 60
           MDMRKRGRPEA+FNSNG+FKKHKQ    L        P               C     T
Sbjct: 1   MDMRKRGRPEAAFNSNGSFKKHKQELESLSTVGGKSKP---------------CTKFFST 60

Query: 61  AGCPFGESCHFLHYVPGGYNVVAQMMNLAPVGSQPSRNMAAPPSVTNGGSSAPSQVKTRM 120
           AGCPFGESCHFLHYVPGGYN VAQMMNLAPVGSQPSRNMAAPP V+NGGSSAPSQ+KTRM
Sbjct: 61  AGCPFGESCHFLHYVPGGYNAVAQMMNLAPVGSQPSRNMAAPP-VSNGGSSAPSQIKTRM 120

Query: 121 CNKYNTAEGCKFGDKCNFAHGEWELGRPNPPSHDNPRAIGGGGGGGHMGGRMGGRMDMPP 180
           CNK+N+AEGCKFGDKCNFAHGEWELGRP PPSHDNPR     G GGHM GRMGGRMD+PP
Sbjct: 121 CNKFNSAEGCKFGDKCNFAHGEWELGRPTPPSHDNPR-----GMGGHMVGRMGGRMDLPP 180

Query: 181 PGPAASFGASATAKISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIEL 240
           PGPAASFGASATAKISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIEL
Sbjct: 181 PGPAASFGASATAKISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIEL 240

Query: 241 EGTFEQINEASAMVRELIITVSMAGPGKASGGM-GGGPVPTGSNYKTKLCDNFAKGSCTF 300
           EGTFEQINEASAMVRELIITVSM+GPGK  G M GGGP P+GSNYKTKLCDNFAKGSCTF
Sbjct: 241 EGTFEQINEASAMVRELIITVSMSGPGKGHGAMGGGGPAPSGSNYKTKLCDNFAKGSCTF 297

Query: 301 GERCHFAHGAAELRKSGV 318
           GERCHFAHGAAELRKSGV
Sbjct: 301 GERCHFAHGAAELRKSGV 297

[Close]

BLAST of HG10017961 vs. ExPASy TrEMBL
Match: A0A5A7SWC5 (Zinc finger CCCH domain-containing protein 36-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold103G00370 PE=4 SV=1)

HSP 1 Score: 509.6 bits (1311), Expect = 9.4e-141
Identity = 251/260 (96.54%), Postives = 256/260 (98.46%), Query Frame = 0


Query: 60  TAGCPFGESCHFLHYVPGGYNVVAQMMNLAPVGSQPSRNMAAPPSVTNGGSSAPSQVKTR 119
           TAGCPFGESCHFLHYVPGGYNVVAQMMNLAPVG+QPSRN+AAPPSVTNGGSSAPSQVKTR
Sbjct: 27  TAGCPFGESCHFLHYVPGGYNVVAQMMNLAPVGAQPSRNVAAPPSVTNGGSSAPSQVKTR 86

Query: 120 MCNKYNTAEGCKFGDKCNFAHGEWELGRPNPPSHDNPRAIGGGGGGG--HMGGRMGGRMD 179
           MCNK+NTAEGCKFGDKCNFAHGEWELGRPNPPSHDNPRA+GGGGGGG  HM GRMGGRMD
Sbjct: 87  MCNKFNTAEGCKFGDKCNFAHGEWELGRPNPPSHDNPRAMGGGGGGGGVHMVGRMGGRMD 146

Query: 180 MPPPGPAASFGASATAKISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRN 239
           +PPPGPAASFGASATAKISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRN
Sbjct: 147 LPPPGPAASFGASATAKISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRN 206

Query: 240 IELEGTFEQINEASAMVRELIITVSMAGPGKASGGMGGGPVPTGSNYKTKLCDNFAKGSC 299
           IELEGTFEQINEASAMVRELIITVSMAGPGKASGGMGGGP PTGSNYKTKLCDNFAKGSC
Sbjct: 207 IELEGTFEQINEASAMVRELIITVSMAGPGKASGGMGGGPAPTGSNYKTKLCDNFAKGSC 266

Query: 300 TFGERCHFAHGAAELRKSGV 318
           TFGERCHFAHGAAELRKSGV
Sbjct: 267 TFGERCHFAHGAAELRKSGV 286

[Close]

BLAST of HG10017961 vs. TAIR 10
Match: AT5G06770.1 (KH domain-containing protein / zinc finger (CCCH type) family protein )

HSP 1 Score: 250.0 bits (637), Expect = 2.6e-66
Identity = 157/319 (49.22%), Postives = 180/319 (56.43%), Query Frame = 0


Query: 1   MDMRKRGRPE--ASFNSNGAFKKHKQVSVKLIRCLPPKMPRFGLGYLVRLSFYLRCDGLI 60
           MD RKRGRPE  AS NSNG FK+ KQ    +           GLG     S    C    
Sbjct: 1   MDARKRGRPEAAASHNSNGGFKRSKQEMESI---------STGLG-----SKSKPCTKFF 60

Query: 61  CTAGCPFGESCHFLHYVPGGYNVVAQMMNLAPVGSQPSRNMAAPPSVTNGGSSAPSQVKT 120
            T+GCPFG++CHFLHYVPGGYN  AQM NL P  SQ SRNM                   
Sbjct: 61  STSGCPFGDNCHFLHYVPGGYNAAAQMTNLRPPVSQVSRNMQ------------------ 120

Query: 121 RMCNKYNTAEGCKFGDKCNFAHGEWELGRPNPPSHDNPRAIGGGGGGGHMGGRMGGRMDM 180
                                                        G G  GGR  GR D 
Sbjct: 121 ---------------------------------------------GSGGPGGRFSGRGD- 180

Query: 181 PPPGPAASFGASATAKISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNI 240
           P  GP + FGAS T+KIS+DASLAGAIIGKGGI+SKQICR+TGAKLSI+DHE DPNL+ I
Sbjct: 181 PGSGPVSIFGAS-TSKISVDASLAGAIIGKGGIHSKQICRETGAKLSIKDHERDPNLKII 239

Query: 241 ELEGTFEQINEASAMVRELIITVSMAGPGKASGGMGGGPVPTGSNYKTKLCDNFAKGSCT 300
           ELEGTFEQIN AS MVRELI  +      +  GG  G P P GSNYKTK+CD ++KG+CT
Sbjct: 241 ELEGTFEQINVASGMVRELIGRLGSVKKPQGIGGPEGKPHP-GSNYKTKICDRYSKGNCT 239

Query: 301 FGERCHFAHGAAELRKSGV 318
           +G+RCHFAHG +ELR+SG+
Sbjct: 301 YGDRCHFAHGESELRRSGI 239

[Close]

BLAST of HG10017961 vs. TAIR 10
Match: AT3G12130.1 (KH domain-containing protein / zinc finger (CCCH type) family protein )

HSP 1 Score: 243.4 bits (620), Expect = 2.4e-64
Identity = 156/329 (47.42%), Postives = 184/329 (55.93%), Query Frame = 0


Query: 1   MDMRKRGRPEA-SFNSN-GAFKKHKQVSVKLIRCLPPKMPRF--GLGYLVRLSFYLRCDG 60
           MD RKRGRPEA SFNSN G +KK KQ           +M  +  GLG     S    C  
Sbjct: 1   MDTRKRGRPEAGSFNSNGGGYKKSKQ-----------EMESYSTGLG-----SKSKPCTK 60

Query: 61  LICTAGCPFGESCHFLHYVPGGYNVVAQMMNLAPVGSQPSRNMAAPPSVTNGGSSAPSQV 120
              T+GCPFGE+CHFLHYVPGGYN V+QM N+ P   Q SRNM                 
Sbjct: 61  FFSTSGCPFGENCHFLHYVPGGYNAVSQMTNMGPPIPQVSRNMQ---------------- 120

Query: 121 KTRMCNKYNTAEGCKFGDKCNFAHGEWELGRPNPPSHDNPRAIGGGGGGGHMGGRMGGRM 180
                                                       G G GG   GR     
Sbjct: 121 --------------------------------------------GSGNGGRFSGR----- 180

Query: 181 DMPPPGPAASFGASATAKISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLR 240
               PG  ++FG SATA+ S+DASLAGAIIGKGG++SKQICRQTG KLSI+DHE DPNL+
Sbjct: 181 GESGPGHVSNFGDSATARFSVDASLAGAIIGKGGVSSKQICRQTGVKLSIQDHERDPNLK 240

Query: 241 NIELEGTFEQINEASAMVRELIITVSMAGPGKASGGMGGG--------PVPTGSNYKTKL 300
           NI LEGT EQI+EASAMV++LI  ++ A      GG+GGG        P P GSN+KTK+
Sbjct: 241 NIVLEGTLEQISEASAMVKDLIGRLNSAAKKPPGGGLGGGGGMGSEGKPHP-GSNFKTKI 247

Query: 301 CDNFAKGSCTFGERCHFAHGAAELRKSGV 318
           C+ F+KG+CTFG+RCHFAHG AELRKSG+
Sbjct: 301 CERFSKGNCTFGDRCHFAHGEAELRKSGI 247

[Close]

BLAST of HG10017961 vs. TAIR 10
Match: AT1G32360.1 (Zinc finger (CCCH-type) family protein )

HSP 1 Score: 57.0 bits (136), Expect = 3.2e-08
Identity = 41/116 (35.34%), Postives = 50/116 (43.10%), Query Frame = 0


Query: 54  CDGLICTAGCPFGESCHFLHYVPGGYNVVAQMMNLAPVG-SQPSRNMAAPPSVTNGGSSA 113
           C       GCP+GESC FLH      N  +  ++L P G        +   SV  GGSS+
Sbjct: 178 CKKFYTEEGCPYGESCTFLH-DEASRNRESVAISLGPGGYGSGGGGGSGGGSVGGGGSSS 237

Query: 114 ---------------------PSQVKTRMCNKYNTAEGCKFGDKCNFAHGEWELGR 148
                                PS  KTR+CNK+     C FG KC+FAHG  EL R
Sbjct: 238 NVVVLGGGGGSGSGSGIQILKPSNWKTRICNKWEITGYCPFGAKCHFAHGAAELHR 292

[Close]

BLAST of HG10017961 vs. TAIR 10
Match: AT2G25970.1 (KH domain-containing protein )

HSP 1 Score: 51.6 bits (122), Expect = 1.3e-06
Identity = 41/110 (37.27%), Postives = 60/110 (54.55%), Query Frame = 0


Query: 169 GGRMGGRMDMPPPGPAASFGASATAKISIDASLAGAIIGKGGINSKQICRQTGAKLSI-R 228
           G +M G +    P    SF    T KI I     G IIGKGG   K +  Q+GAK+ + R
Sbjct: 113 GKQMSGTVPSSIPVSYGSF-QGTTKKIDIPNMRVGVIIGKGGETIKYLQLQSGAKIQVTR 172

Query: 229 DHESDPN--LRNIELEGTFEQINEASAMVRELIITVSMAGPGKASGGMGG 276
           D ++DPN   R ++L GT +QI++A  ++ + ++  + AG    SGG GG
Sbjct: 173 DMDADPNCATRTVDLTGTPDQISKAEQLITD-VLQEAEAGNTAGSGGGGG 220

[Close]

BLAST of HG10017961 vs. TAIR 10
Match: AT3G19360.1 (Zinc finger (CCCH-type) family protein )

HSP 1 Score: 48.9 bits (115), Expect = 8.7e-06
Identity = 69/225 (30.67%), Postives = 89/225 (39.56%), Query Frame = 0


Query: 95  PSRNMAAPPSVTNGGSSAPSQVKTRMCNKYNTAEGCKFGDKCNFAHGEWELGRPNPPSHD 154
           PS N   PP V  G  +A    KTRMC K+  A  C+ G+ CNFAHG  +L +  PPS  
Sbjct: 89  PSLN---PPPVNKG--TANIFYKTRMCAKFR-AGTCRNGELCNFAHGIEDLRQ--PPS-- 148

Query: 155 NPRAIGGGGGGGHMGGRMGGR---MDMPPPGPAASFGASATAKISIDASLAGAIIGKGGI 214
           N + I G    G    R   R    + P   P  +       KI +   L          
Sbjct: 149 NWQEIVGPPPAGQDRERERERERERERPSLAPVVNNNWEDDQKIILRMKLCRKFCFGEEC 208

Query: 215 NSKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASAMVRELIITVSMAGPGKASG 274
                C      LS +  E    LR   +        +  +     +I V+  G      
Sbjct: 209 PYGDRCNFIHEDLS-KFREDSGKLRESSVISVGATAADQPSDTASNLIEVNRQGSIPVPA 268

Query: 275 GMGGGPVPTGSNYKTKLCDNF-AKGSCTFGERCHFAHGAAELRKS 316
            M  G V     +KT+LC  F   G C FG++CHFAHG AEL  S
Sbjct: 269 PMNNGGVVKTVYWKTRLCMKFDITGQCPFGDKCHFAHGQAELHNS 302

The following BLAST results are available for this feature:

BLAST of HG10017961 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008442098.1	1.9e-151	86.52	PREDICTED: zinc finger CCCH domain-containing protein 36-like [Cucumis melo]	[more]
XP_004146386.1	3.2e-151	86.25	zinc finger CCCH domain-containing protein 31 [Cucumis sativus] >KGN54808.1 hypo...	[more]
XP_038882544.1	3.0e-149	85.80	zinc finger CCCH domain-containing protein 31 [Benincasa hispida]	[more]
XP_023545090.1	1.7e-141	83.02	zinc finger CCCH domain-containing protein 31-like [Cucurbita pepo subsp. pepo]	[more]
XP_022967865.1	8.7e-141	82.70	zinc finger CCCH domain-containing protein 31 [Cucurbita maxima]	[more]

BLAST of HG10017961 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q7XPK1	9.5e-82	54.01	Zinc finger CCCH domain-containing protein 31 OS=Oryza sativa subsp. japonica OX...	[more]
Q7F8R0	1.6e-76	54.49	Zinc finger CCCH domain-containing protein 14 OS=Oryza sativa subsp. japonica OX...	[more]
Q69XQ3	1.2e-71	56.72	Zinc finger CCCH domain-containing protein 44 OS=Oryza sativa subsp. japonica OX...	[more]
Q9FG30	3.6e-65	49.22	Zinc finger CCCH domain-containing protein 52 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q9C7C3	3.4e-63	47.42	Zinc finger CCCH domain-containing protein 36 OS=Arabidopsis thaliana OX=3702 GN...	[more]

BLAST of HG10017961 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B4W9	9.0e-152	86.52	zinc finger CCCH domain-containing protein 36-like OS=Cucumis melo OX=3656 GN=LO...	[more]
A0A0A0KZ79	1.5e-151	86.25	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G507380 PE=4 SV=1	[more]
A0A6J1HVM0	4.2e-141	82.70	zinc finger CCCH domain-containing protein 31 OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A6J1ESD4	7.2e-141	82.39	zinc finger CCCH domain-containing protein 14-like OS=Cucurbita moschata OX=3662...	[more]
A0A5A7SWC5	9.4e-141	96.54	Zinc finger CCCH domain-containing protein 36-like OS=Cucumis melo var. makuwa O...	[more]

BLAST of HG10017961 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G06770.1	2.6e-66	49.22	KH domain-containing protein / zinc finger (CCCH type) family protein	[more]
AT3G12130.1	2.4e-64	47.42	KH domain-containing protein / zinc finger (CCCH type) family protein	[more]
AT1G32360.1	3.2e-08	35.34	Zinc finger (CCCH-type) family protein	[more]
AT2G25970.1	1.3e-06	37.27	KH domain-containing protein	[more]
AT3G19360.1	8.7e-06	30.67	Zinc finger (CCCH-type) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000571	Zinc finger, CCCH-type	SMART	SM00356	c3hfinal6	coord: 283..309 e-value: 6.0E-8 score: 42.4 coord: 115..142 e-value: 0.041 score: 23.0
IPR000571	Zinc finger, CCCH-type	PFAM	PF00642	zf-CCCH	coord: 284..308 e-value: 1.4E-9 score: 37.6 coord: 117..142 e-value: 3.0E-5 score: 23.8
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 283..310 score: 16.558243
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 115..143 score: 13.619454
IPR004087	K Homology domain	SMART	SM00322	kh_6	coord: 189..259 e-value: 7.3E-13 score: 58.7
None	No IPR available	PFAM	PF14608	zf-CCCH_2	coord: 63..73 e-value: 0.17 score: 12.5
None	No IPR available	GENE3D	4.10.1000.10		coord: 110..148 e-value: 2.5E-11 score: 44.7 coord: 282..315 e-value: 2.2E-14 score: 54.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 94..113
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 148..167
None	No IPR available	PANTHER	PTHR10288	KH DOMAIN CONTAINING RNA BINDING PROTEIN	coord: 49..316
None	No IPR available	PANTHER	PTHR10288:SF273	TRANSCRIPTION FACTOR C3H FAMILY-RELATED	coord: 49..316
None	No IPR available	PROSITE	PS50084	KH_TYPE_1	coord: 190..254 score: 14.738799
None	No IPR available	CDD	cd00105	KH-I	coord: 192..254 e-value: 1.60307E-15 score: 67.9703
IPR004088	K Homology domain, type 1	PFAM	PF00013	KH_1	coord: 193..256 e-value: 4.8E-12 score: 45.5
IPR036612	K Homology domain, type 1 superfamily	GENE3D	3.30.1370.10	K Homology domain, type 1	coord: 186..281 e-value: 6.3E-16 score: 60.1
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 179..260
IPR036855	Zinc finger, CCCH-type superfamily	SUPERFAMILY	90229	CCCH zinc finger	coord: 282..313
IPR036855	Zinc finger, CCCH-type superfamily	SUPERFAMILY	90229	CCCH zinc finger	coord: 114..146

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10017961.1	HG10017961.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010468	regulation of gene expression
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003723	RNA binding