Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTAGGAAACTTAGGGATGCAATTGGCTCATTTCTCGATGTTGAGTGCGAGCAGGATGGTCTGTGTTGGGGTGACTCGATGAGCCTTAAAGTTCAACTTGATATTTCAGAACCTCTTTGTAGAGGAATCAAAGTTCGGATGTCTGATAAGGCAATCGATAGATGGGTTAAAATTCGTTATGAGACTCCCGGAATTCTGCTACGGTTGTGGTCGTATTGGTCATGTTTTGAAGGATTGTAAATGTTCTGTCACACAAGATAACAGTCTTGGAGTGAATCTGCTTCAGTTTGGTCCGTGGCTGAAATTCCAGGGTACCCCTAAACTTACTAAGAAACCTGGCCCCTCTAAAGATTTATCAAATTCAGTTCAAGAACCCCCCAAGAATGGATTCTTCTCCTTTTGAAGGGAAGGAGATAGAAACTACTTCCTAGGACCATCAAGAAGAGGCTCAGTTGAATCAGTATCCTATAGACTTAAACATTCCTCATGAAGAGATTAGTCGATCAGATTTTGAAGGTTCTGGCATTCTTCCTTACCCTTGTAATCCTGCTACAAGAACTTCTGACCCTCCCCCCCCCCTCCCCTTCCGTTTCTGTCCCTCTGCCTTCTCTTTCTTTGGATCCCAATTTTTTAGATTTTTCCCCTGGTTCTTTCCCAGCGGCTTCTGAGTCTTTTTGTCCTTCCCCCCTTAAAAAAGGTAGGAAAAAGAAGTCTAAATTAGCTTCAATTTCTCCTTTAGTGCAGAGTTCTTTAGTAGATTCTAAGAGGAAATGGATGGACAATGATAGCTTCTCTTCTGTTAAAAGGAAAAAGGTTCGTGCTTGTTCTGAGGGGGCGGTCCTTGATGAGGTTACTGATTTTATGGCAGTGGCTGCAAGGCAGCCCTGCCTAGGGCCATGAAAATCATATGTTGGAATGCTAGAGGCTTGCGCAACCTTCGAGCATTCCGCTTCCTTGGTGACCTTGTCCGAAACACAAAACCAGATATTCTTTTCATCTCAAAAACCAAAGGTGGAGTTGATCTCTGCAACAGAATTAAATTCAGATACAGGTTTTATGGCTATTTCCCTATGTGTAGTGTGGGTTCAAGAGGTGGCCTTTGTCTTTTGTGGACGAGATCTGTCAATGTTGTTATCAAATCATTTTCTTCCCACCATATCGACTCTTTTGTTCATTGGAATGATAGATCTTGGAGGTTTACAGGTCTTTATGGTTACTCTGAATCTTCTAGAAAATATCTGACTTGGGATCTTATGAGAAGAGTGAACATGCAAGGTGATGTTCCTTGGTTGCTTGGAGGGGATTTGAATGAGATCCTGTGGGATAATGAAAAAAGTGGTGGCCCCCCTAAATCGTACAAGTTCTTAACAAATTTTAGAGAGGCTCTTGATAATTGCGAGTTGTCTGATCTTGGTTTCTCGGGTTCCACCTTTACTTGGCAAGGGAAAAGGAATAATTACATCATCCGTGAGAGGCTTTATAGGTTTTTGTGCAATGATGCGTTTTGGGATCTCTTCTCGTTTCTTAGAGTCTCTCATCTTGATTGGCTGTTTTCTAACCATATACCGATTAGAATTTTCATTGATACAAGAAAGAAACCAAGGTTAAGAAACAAAAATTCTTTTAAATTCGAAGAAGTATGGCTCTAGATAGAGGAATGTAGGAAGATCATTTCTAATGAAGGTTACTGGGACAGGCCAAGTAACATTACCTCCTTAAGTGAAAGTTTGGCTTTATGCTCTAAGTCTCTTTCCAGATGGGGTAAGGACACCTTCAAAGTGTTAAGTGCGAAAATTAAGGACTGTAAAAGAGCTCTTCAAGCTGCGTATGATGGTCCCTCTGTAGCTGATTACAATCAGGTTCATGAAGTTGAATTCAAACTTGAGAGACTGCGAGGATGA
mRNA sequence
ATGGCTAGGAAACTTAGGGATGCAATTGGCTCATTTCTCGATGTTGAGTGCGAGCAGGATGGTCTGTGTTGGGGTGACTCGATGAGCCTTAAAGTTCAACTTGATATTTCAGAACCTCTTTGTAGAGGAATCAAAGTTCGGATGTCTGATAAGGCAATCGATAGATGGGTTAAAATTCGTTATGAGACTCCCGGAATTCTGCTACGGTTGTGGTCGTATTGGTCATGTTTTGAAGGATTTGGCTGCAAGGCAGCCCTGCCTAGGGCCATGAAAATCATATGTTGGAATGCTAGAGGCTTGCGCAACCTTCGAGCATTCCGCTTCCTTGGTGACCTTGTCCGAAACACAAAACCAGATATTCTTTTCATCTCAAAAACCAAAGGTGGAGTTGATCTCTGCAACAGAATTAAATTCAGATACAGGTTTTATGGCTATTTCCCTATGTGTAGTGTGGGTTCAAGAGGTGGCCTTTGTCTTTTGTGGACGAGATCTGTCAATGTTGTTATCAAATCATTTTCTTCCCACCATATCGACTCTTTTGTTCATTGGAATGATAGATCTTGGAGGTTTACAGGTCTTTATGGTTACTCTGAATCTTCTAGAAAATATCTGACTTGGGATCTTATGAGAAGAGTGAACATGCAAGGTGATGTTCCTTGGTTGCTTGGAGGGGATTTGAATGAGATCCTGTGGGATAATGAAAAAAGTGGTGGCCCCCCTAAATCGTACAAGTTCTTAACAAATTTTAGAGAGGCTCTTGATAATTGCGAGTTGTCTGATCTTGGTTTCTCGGGTTCCACCTTTACTTGGCAAGGGAAAAGGAATAATTACATCATCCGTGAGAGGCTTTATAGGTTTTTGTGCAATGATGCGTTTTGGGATCTCTTCTCGTTTCTTAGAGTCTCTCATCTTGATTGGCTGTTTTCTAACCATATACCGATTAGAATTTTCATTGATACAAGAAAGAAACCAAGATGGGGTAAGGACACCTTCAAAGTGTTAAGTGCGAAAATTAAGGACTGTAAAAGAGCTCTTCAAGCTGCGTATGATGGTCCCTCTGTAGCTGATTACAATCAGGTTCATGAAGTTGAATTCAAACTTGAGAGACTGCGAGGATGA
Coding sequence (CDS)
ATGGCTAGGAAACTTAGGGATGCAATTGGCTCATTTCTCGATGTTGAGTGCGAGCAGGATGGTCTGTGTTGGGGTGACTCGATGAGCCTTAAAGTTCAACTTGATATTTCAGAACCTCTTTGTAGAGGAATCAAAGTTCGGATGTCTGATAAGGCAATCGATAGATGGGTTAAAATTCGTTATGAGACTCCCGGAATTCTGCTACGGTTGTGGTCGTATTGGTCATGTTTTGAAGGATTTGGCTGCAAGGCAGCCCTGCCTAGGGCCATGAAAATCATATGTTGGAATGCTAGAGGCTTGCGCAACCTTCGAGCATTCCGCTTCCTTGGTGACCTTGTCCGAAACACAAAACCAGATATTCTTTTCATCTCAAAAACCAAAGGTGGAGTTGATCTCTGCAACAGAATTAAATTCAGATACAGGTTTTATGGCTATTTCCCTATGTGTAGTGTGGGTTCAAGAGGTGGCCTTTGTCTTTTGTGGACGAGATCTGTCAATGTTGTTATCAAATCATTTTCTTCCCACCATATCGACTCTTTTGTTCATTGGAATGATAGATCTTGGAGGTTTACAGGTCTTTATGGTTACTCTGAATCTTCTAGAAAATATCTGACTTGGGATCTTATGAGAAGAGTGAACATGCAAGGTGATGTTCCTTGGTTGCTTGGAGGGGATTTGAATGAGATCCTGTGGGATAATGAAAAAAGTGGTGGCCCCCCTAAATCGTACAAGTTCTTAACAAATTTTAGAGAGGCTCTTGATAATTGCGAGTTGTCTGATCTTGGTTTCTCGGGTTCCACCTTTACTTGGCAAGGGAAAAGGAATAATTACATCATCCGTGAGAGGCTTTATAGGTTTTTGTGCAATGATGCGTTTTGGGATCTCTTCTCGTTTCTTAGAGTCTCTCATCTTGATTGGCTGTTTTCTAACCATATACCGATTAGAATTTTCATTGATACAAGAAAGAAACCAAGATGGGGTAAGGACACCTTCAAAGTGTTAAGTGCGAAAATTAAGGACTGTAAAAGAGCTCTTCAAGCTGCGTATGATGGTCCCTCTGTAGCTGATTACAATCAGGTTCATGAAGTTGAATTCAAACTTGAGAGACTGCGAGGATGA
Protein sequence
MARKLRDAIGSFLDVECEQDGLCWGDSMSLKVQLDISEPLCRGIKVRMSDKAIDRWVKIRYETPGILLRLWSYWSCFEGFGCKAALPRAMKIICWNARGLRNLRAFRFLGDLVRNTKPDILFISKTKGGVDLCNRIKFRYRFYGYFPMCSVGSRGGLCLLWTRSVNVVIKSFSSHHIDSFVHWNDRSWRFTGLYGYSESSRKYLTWDLMRRVNMQGDVPWLLGGDLNEILWDNEKSGGPPKSYKFLTNFREALDNCELSDLGFSGSTFTWQGKRNNYIIRERLYRFLCNDAFWDLFSFLRVSHLDWLFSNHIPIRIFIDTRKKPRWGKDTFKVLSAKIKDCKRALQAAYDGPSVADYNQVHEVEFKLERLRG
Homology
BLAST of HG10017926 vs. NCBI nr
Match:
KAF5449841.1 (hypothetical protein F2P56_030246 [Juglans regia])
HSP 1 Score: 207.2 bits (526), Expect = 2.4e-49
Identity = 100/227 (44.05%), Postives = 138/227 (60.79%), Query Frame = 0
Query: 90 MKIICWNARGLRNLRAFRFLGDLVRNTKPDILFISKTKGGVDLCNRIKFRYRFYGYFPMC 149
MKI+CWN+ GL N + R L DL+ PD++F+ +TK K+++ F F +
Sbjct: 1 MKILCWNSSGLGNPQGIRALRDLITREDPDLVFLQETKMRAQAMTTCKYKFGFVNCFFVD 60
Query: 150 SVGSRGGLCLLWTRSVNVVIKSFSSHHIDSFVHWND-RSWRFTGLYGYSESSRKYLTWDL 209
VG GGL LLW R ++V I SFS +HID+ + +D WRFTG+YG+ ++S +YLTW+L
Sbjct: 61 CVGRSGGLSLLWKREISVSISSFSRYHIDACIQESDLAEWRFTGVYGHPDASNRYLTWNL 120
Query: 210 MRRVNMQGDVPWLLGGDLNEILWDNEKSGGPPKSYKFLTNFREALDNCELSDLGFSGSTF 269
MR + PWL+GGD NE+L+ +EK GG P Y L NFR +++C L DLGF G F
Sbjct: 121 MRTLCPSTSGPWLVGGDFNEVLYLHEKRGGRPWPYAQLENFRAVMEDCALQDLGFQGPRF 180
Query: 270 TW-QGKRNNYIIRERLYRFLCNDAFWDLFSFLRVSHLDWLFSNHIPI 315
TW G+ I ERL RF N W++F RV H +S+H+PI
Sbjct: 181 TWCNGRTGIQRISERLDRFFGNQQLWEVFPKERVRHGVITYSDHLPI 227
BLAST of HG10017926 vs. NCBI nr
Match:
KAF5464386.1 (hypothetical protein F2P56_014464 [Juglans regia])
HSP 1 Score: 204.1 bits (518), Expect = 2.0e-48
Identity = 107/266 (40.23%), Postives = 152/266 (57.14%), Query Frame = 0
Query: 90 MKIICWNARGLRNLRAFRFLGDLVRNTKPDILFISKTKGGVDLCNRIKFRYRFYGYFPMC 149
M ++ WN RGL N R R L DLVR P +LF+ +TK ++K+R + +
Sbjct: 1 MSLLSWNTRGLGNPRGVRALSDLVREEDPMVLFLQETKLSEKGMEKLKYRLGYKNCLAVS 60
Query: 150 SVGSRGGLCLLWTRSVNVVIKSFSSHHIDSFVHWN---DRSWRFTGLYGYSESSRKYLTW 209
S G GG+ LLW VN+VIK++S HI + + N D SW FTG+YG + SR++ TW
Sbjct: 61 SEGRSGGIALLWKNDVNIVIKNYSRSHIHATLQDNTTADDSWFFTGVYGQPDPSRRHETW 120
Query: 210 DLMRRVNMQGDVPWLLGGDLNEILWDNEKSGGPPKSYKFLTNFREALDNCELSDLGFSGS 269
+L+R + + D WLL GD NE+L NEK GG ++ K + F E +D+CEL DLGF G+
Sbjct: 121 NLLRSLKVPSDKGWLLMGDFNEVLSPNEKCGGRIRTDKQIQAFSEVIDDCELLDLGFKGN 180
Query: 270 TFTWQGKRN-NYIIRERLYRFLCNDAFWDLFSFLRVSHLDWLFSNHIPIRIFIDTRKKPR 329
FTW KR I ERL R L N + LF VSH +S+H+PI++ + + PR
Sbjct: 181 PFTWCNKREPAQCISERLDRCLANLKWKALFKMASVSHGSVAYSDHVPIKLQLQVNRMPR 240
Query: 330 WGKDTFK--VLSAKIKDCKRALQAAY 350
GK F+ + + K CK ++ A+
Sbjct: 241 KGKKLFRFEAMWVEEKSCKTIIEKAW 266
BLAST of HG10017926 vs. NCBI nr
Match:
KAF5443558.1 (hypothetical protein F2P56_036105, partial [Juglans regia])
HSP 1 Score: 199.9 bits (507), Expect = 3.8e-47
Identity = 100/227 (44.05%), Postives = 134/227 (59.03%), Query Frame = 0
Query: 90 MKIICWNARGLRNLRAFRFLGDLVRNTKPDILFISKTKGGVDLCNRIKFRYRFYGYFPMC 149
MK++CWN+RGL N + R L DL+ N P ++F+ +TK KFR F +
Sbjct: 1 MKLLCWNSRGLGNPQGIRVLRDLITNEDPSLVFLQETKLKARAMENCKFRLHLTHCFTVD 60
Query: 150 SVGSRGGLCLLWTRSVNVVIKSFSSHHIDSFVHWND-RSWRFTGLYGYSESSRKYLTWDL 209
VG GGL LLW + V ++SFS HHID+ + D WRFTG+YG E +YLTW+L
Sbjct: 61 CVGRSGGLSLLWKGDLRVRVQSFSLHHIDALIQDGDGPEWRFTGVYGNPEVVNRYLTWNL 120
Query: 210 MRRVNMQGDVPWLLGGDLNEILWDNEKSGGPPKSYKFLTNFREALDNCELSDLGFSGSTF 269
+RR+N D PWL+GGD NE+L NEK GG P+S + FR + +C L DLGF G +
Sbjct: 121 LRRLNSGVDGPWLVGGDFNELLHFNEKRGGRPRSENQMEAFRNVIFDCSLRDLGFRGPKY 180
Query: 270 TW-QGKRNNYIIRERLYRFLCNDAFWDLFSFLRVSHLDWLFSNHIPI 315
TW G+ + I ERL RFL N+ F LF V H +S+H+P+
Sbjct: 181 TWCNGRAGSRAISERLDRFLGNNQFCALFPQFVVRHGMAAYSDHLPV 227
BLAST of HG10017926 vs. NCBI nr
Match:
XP_042950313.1 (uncharacterized protein LOC122282426 [Carya illinoinensis])
HSP 1 Score: 194.9 bits (494), Expect = 1.2e-45
Identity = 100/227 (44.05%), Postives = 134/227 (59.03%), Query Frame = 0
Query: 90 MKIICWNARGLRNLRAFRFLGDLVRNTKPDILFISKTKGGVDLCNRIKFRYRFYGYFPMC 149
MK ICWN+RGL N R L DL+ PD+LF+ +TK + +K + F F +
Sbjct: 1 MKTICWNSRGLGNPSGIRALRDLIAREGPDLLFLQETKLSTKGMDALKCKLGFVNCFSVD 60
Query: 150 SVGSRGGLCLLWTRSVNVVIKSFSSHHIDSFVHWND-RSWRFTGLYGYSESSRKYLTWDL 209
S G GGL LLW + V ++SFS +HID + +D WRFTGLYG+ ++SR+ TW+L
Sbjct: 61 SEGRSGGLGLLWNSDLGVELRSFSQYHIDVHIKIDDLMVWRFTGLYGHPDTSRRTFTWNL 120
Query: 210 MRRVNMQGDVPWLLGGDLNEILWDNEKSGGPPKSYKFLTNFREALDNCELSDLGFSGSTF 269
+R ++ +PWL+GGDLNE+L +EK GG + + FRE L CEL DLG+ G F
Sbjct: 121 IRTLSSIEQLPWLVGGDLNEVLHPHEKRGGRDRPVSQIEAFREVLTECELRDLGYKGQRF 180
Query: 270 T-WQGKRNNYIIRERLYRFLCNDAFWDLFSFLRVSHLDWLFSNHIPI 315
T W G+ N I E L RF+ ND LF L V H + S+HIPI
Sbjct: 181 TWWNGRGGNAHIFEHLDRFVGNDLLTHLFPHLVVQHGNVAHSDHIPI 227
BLAST of HG10017926 vs. NCBI nr
Match:
XP_042980077.1 (uncharacterized protein LOC122310261 [Carya illinoinensis])
HSP 1 Score: 193.0 bits (489), Expect = 4.7e-45
Identity = 105/265 (39.62%), Postives = 150/265 (56.60%), Query Frame = 0
Query: 90 MKIICWNARGLRNLRAFRFLGDLVRNTKPDILFISKTKGGVDLCNRIKFRYRFYGYFPMC 149
MK ICWN+ GL N R L DL+ PD+LF+ +TK + +K + F F +
Sbjct: 1 MKTICWNSCGLGNPSGIRALRDLIAREGPDLLFLQETKLLTKGMDTLKRKLGFVNCFSVD 60
Query: 150 SVGSRGGLCLLWTRSVNVVIKSFSSHHIDSFVHWND-RSWRFTGLYGYSESSRKYLTWDL 209
S G GGL LLW + V ++SFS +HID + +D WRFTGLYG+ ++ R+ TW+L
Sbjct: 61 SEGRSGGLGLLWNSDLRVELRSFSKYHIDVHIKMDDLMVWRFTGLYGHPDALRRTFTWNL 120
Query: 210 MRRVNMQGDVPWLLGGDLNEILWDNEKSGGPPKSYKFLTNFREALDNCELSDLGFSGSTF 269
+R ++ +PWL+GGDLNE+L +EK GG + + FRE L CEL DLG+ G F
Sbjct: 121 IRTLSSIEQIPWLVGGDLNEVLHPHEKRGGRDRPVSQIEAFREVLTECELRDLGYKGQRF 180
Query: 270 T-WQGKRNNYIIRERLYRFLCNDAFWDLFSFLRVSHLDWLFSNHIPIRIFIDTRKKP--- 329
T W G+ N I ERL RF+ ND LF L V H + S+HIPI +F + +P
Sbjct: 181 TWWNGRGGNAYIFERLDRFVGNDLLTHLFPHLVVQHGNVAHSDHIPI-LFESSNFQPMPR 240
Query: 330 RWGKDTFKVLSAKIKDCKRALQAAY 350
R + F+ + + C+R ++ +
Sbjct: 241 RPKQFRFEAMWVGEEQCERIIEQVW 264
BLAST of HG10017926 vs. ExPASy TrEMBL
Match:
A0A2N9F086 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS8394 PE=4 SV=1)
HSP 1 Score: 193.4 bits (490), Expect = 1.7e-45
Identity = 98/240 (40.83%), Postives = 135/240 (56.25%), Query Frame = 0
Query: 79 GFGCKAALPRAMKIICWNARGLRNLRAFRFLGDLVRNTKPDILFISKTKGGVDLCNRIKF 138
G GC A P M+II WN RGL N A R L LV+ P++LF+ +TK R +
Sbjct: 19 GGGCSTAPPETMRIISWNCRGLGNPDAVRSLHMLVKTQGPEVLFLMETKLETSSMERFRV 78
Query: 139 RYRFYGYFPMCSVGSRGGLCLLWTRSVNVVIKSFSSHHIDSFVHW-NDRSWRFTGLYGYS 198
F F + S+G GGL + W +N+ IK++++HHID ++ ND WR TG YG
Sbjct: 79 SLGFNSVFVVPSLGRSGGLAMFWKDGINLEIKNYTTHHIDCYIRQRNDMGWRLTGFYGRP 138
Query: 199 ESSRKYLTWDLMRRVNMQGDVPWLLGGDLNEILWDNEKSGGPPKSYKFLTNFREALDNCE 258
E R++ +W LM ++N G PWL GD NEI++ NEK G P+ + + FRE L C
Sbjct: 139 EDFRRWESWALMDQLNGLGQNPWLCCGDFNEIMYQNEKRGMHPRPLRRMWEFREVLSRCN 198
Query: 259 LSDLGFSGSTFTWQGKRNNYI-IRERLYRFLCNDAFWDLFSFLRVSHLDWLFSNHIPIRI 317
L D+G+ G FTW R ++ERL R L + A+ DLF VSH+ S+H+PI I
Sbjct: 199 LIDMGYRGYDFTWDNNRRGVANVQERLDRALSSPAWTDLFPNSTVSHIWSSTSDHMPILI 258
BLAST of HG10017926 vs. ExPASy TrEMBL
Match:
A0A803Q9W0 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 188.7 bits (478), Expect = 4.3e-44
Identity = 97/290 (33.45%), Postives = 160/290 (55.17%), Query Frame = 0
Query: 82 CKAALPRAMKIICWNARGLRNLRAFRFLGDLVRNTKPDILFISKTKGGVDLCNRIKFRYR 141
C A PR M + WN +GL N L ++V++ +P I+F+S+T+ + I+ R
Sbjct: 427 CWAGSPRTMNSLFWNVQGLGNPWTTTALANIVKDHQPGIVFLSETRSKSNYLETIRIRLG 486
Query: 142 FYGYFPMCSVGSRGGLCLLWTRSVNVVIKSFSSHHIDSFVH-WNDRSWRFTGLYGYSESS 201
F G F + + G GGL LLW V + SF+ HID++++ D +WRFTG YG + S
Sbjct: 487 FEGCFCVDAKGKSGGLALLWKEPFTVHLNSFNDFHIDAWINKEEDLAWRFTGFYGDPDPS 546
Query: 202 RKYLTWDLMRRVNMQGDVPWLLGGDLNEILWDNEKSGGPPKSYKFLTNFREALDNCELSD 261
++ +W L++R+ + PWL GGD NEI +EK GG K + NF A+D C L +
Sbjct: 547 QRKHSWQLLKRIARNHNGPWLCGGDFNEIRGIHEKLGGGGKPGYLMKNFNHAIDTCALRE 606
Query: 262 LGFSGSTFTWQGKRNNYIIRERLYRFLCNDAFWDLFSFLRVSHLDWLFSNHIPIRIFIDT 321
+ + GS FTW R +I ERL R + N+ +W +++ +V HL S+H P+ + +T
Sbjct: 607 IDYEGSQFTWCNGRAANMIYERLDRVMVNNNWWKIYAIAKVKHLSRWCSDHSPLLLTFNT 666
Query: 322 -----RKKPRWG-KDTFKVLSAKIKDCKRALQAAY-DGPSVADYNQVHEV 364
+KK RWG + ++ A ++C++ ++ + +G S+ + E+
Sbjct: 667 IPCGDQKKQRWGYRFHYEKAWADKEECQKIIEDIWKEGNSITSATDLDEI 716
BLAST of HG10017926 vs. ExPASy TrEMBL
Match:
A0A2P6SDG4 (Putative RNA-directed DNA polymerase OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr1g0340391 PE=4 SV=1)
HSP 1 Score: 188.3 bits (477), Expect = 5.6e-44
Identity = 103/300 (34.33%), Postives = 166/300 (55.33%), Query Frame = 0
Query: 90 MKIICWNARGLRNLRAFRFLGDLVRNTKPDILFISKTKGGVDLCNRIKFRYRFYGYFPM- 149
M ++CWN +G+ N L +V P ++F+SKT+ D ++ R + F +
Sbjct: 1 MNVLCWNCQGIGNPWTVSGLKGIVSLNLPSVIFLSKTRCTADEMKGVRERLGWKHAFSVN 60
Query: 150 CS---------VGSRGGLCLLWTRSVNVVIKSFSSHHIDSFV--HWNDRSWRFTGLYGYS 209
CS V GGLCLLW V ++S+S++HID + + R WRFTG+YG+
Sbjct: 61 CSFVKKKKGKGVSRSGGLCLLWNDDTKVSLQSYSNNHIDVVIGEEGDPRCWRFTGVYGFP 120
Query: 210 ESSRKYLTWDLMRRVNMQGDVPWLLGGDLNEILWDNEKSGGPPKSYKFLTNFREALDNCE 269
++ + TW+L+++++M G++PW++GGD NEI ++K GG +S + + + +EAL CE
Sbjct: 121 KAGERSRTWNLLKQLSMHGNLPWVVGGDYNEICERSDKMGGVLRSVRLMNDMKEALVFCE 180
Query: 270 LSDLGFSGSTFTWQGKRNNYIIRERLYRFLCNDAFWDLFSFLRVSHLDWLFSNHIPIRIF 329
L D+ F G FTW+G R +R RL RF C+ + DLF RV HLD S+H+PI +
Sbjct: 181 LDDIQFVGPRFTWRGIRGGEEVRVRLDRFTCSLPWRDLFPASRVRHLDPSTSDHVPILLE 240
Query: 330 IDTRKKPR--WGKDTFKVLSAKIKD--CKRALQAAYD-----GPSVADYNQVHEVEFKLE 369
+ +KK R K FK + D CK ++++++ GP+ +N++ LE
Sbjct: 241 VRIQKKRRKKRKKKRFKFEECWLLDETCKEVVKSSWESVSGVGPTQLLWNRMQSTRAALE 300
BLAST of HG10017926 vs. ExPASy TrEMBL
Match:
A0A803PTM0 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 187.6 bits (475), Expect = 9.6e-44
Identity = 104/287 (36.24%), Postives = 155/287 (54.01%), Query Frame = 0
Query: 90 MKIICWNARGLRNLRAFRFLGDLVRNTKPDILFISKTKGGVDLCNRIKFRYRFYGYFPMC 149
M ++ WNA+GL N R L LV N P ++FI+++K G ++ + F G F +
Sbjct: 1 MNLLIWNAQGLGNPWTERSLASLVTNFSPQMIFIAESKIGKVRAESLRVKLGFVGCFVVE 60
Query: 150 SVGSRGGLCLLWTRSVNVVIKSFSSHHIDSFVH-WNDRSWRFTGLYGYSESSRKYLTWDL 209
+ G GGL LLW+ V + SFS HIDSFV N + WRFTG YG + S++ +W L
Sbjct: 61 ARGKSGGLILLWSMDVETQVLSFSPFHIDSFVRIENGQWWRFTGFYGDPDPSQRCHSWKL 120
Query: 210 MRRVNMQGDVPWLLGGDLNEILWDNEKSGGPPKSYKFLTNFREALDNCELSDLGFSGSTF 269
+RR++ PW +GGD NEI+ EK GG PK + NFR+ALD+C L D + GS +
Sbjct: 121 LRRISRMYSGPWAVGGDFNEIVSQKEKMGGLPKPRYLINNFRKALDSCHLRDGCYEGSEY 180
Query: 270 TWQGKRNNYIIRERLYRFLCNDAFWDLFSFLRVSHLDWLFSNHIPIRIF-----IDTRKK 329
TW R N +I ERL R N ++D+F ++V HLD S+H + + + K
Sbjct: 181 TWCNGRKNDLIFERLNRVCGNLEWFDMFPSMKVRHLDRTNSDHCALLLMEYDPHVQHHNK 240
Query: 330 PRW-GKDTFKVLSAKIKDCKRALQAAYDGPSVADYNQVHEVEFKLER 370
RW + F+ A+ +C +Q A+ + + E++ +L R
Sbjct: 241 TRWRTRFHFESAWAEDNECANIVQLAWQHEK--EVSNTRELQSRLGR 285
BLAST of HG10017926 vs. ExPASy TrEMBL
Match:
A0A2N9G3M9 (CCHC-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS21832 PE=4 SV=1)
HSP 1 Score: 186.8 bits (473), Expect = 1.6e-43
Identity = 123/411 (29.93%), Postives = 199/411 (48.42%), Query Frame = 0
Query: 2 ARKLRDAIGSFLDVECEQDGLCWGDSMSLKVQLDISEPLCRGIKVRMSDKAIDRWVKIRY 61
A + +A+G +++ +DG+ WG+ M ++V++D+S PL R +V++ K WV ++Y
Sbjct: 25 ATSVGNALGVLEEIDIPEDGITWGEFMRVQVRIDVSMPLLRRQRVKLG-KEESIWVTLKY 84
Query: 62 E-------TPGIL------LRL-----------------W-------------------- 121
E GIL RL W
Sbjct: 85 EKLPTFCYNCGILGHSERECRLVTQHEKSKDGNHYEYGSWLRATPGRRKTGSVTFEGAFP 144
Query: 122 -----SYWSCFEGFGCKAALPRAMKIICWNARGLRNLRAFRFLGDLVRNTKPDILFISKT 181
Y + G GCKAA P AM I+ WN +GL N R L +LV+ P ILF+ +T
Sbjct: 145 KRNGIVYHNQLNGGGCKAASPTAMSILSWNCQGLGNPWTVRHLHELVKENNPSILFLMET 204
Query: 182 KGGVDLCNRIKFRYRFYGYFPMCSVGSRGGLCLLWTRSVNVVIKSFSSHHIDSFVHWN-- 241
+ +++ R RF F + +GGL + W + IK FS +HID+ V
Sbjct: 205 RMKAVEMEKVRQRLRFNFVFSVPCQRRKGGLAMFWKDLDALEIKKFSQNHIDATVMEKSL 264
Query: 242 DRSWRFTGLYGYSESSRKYLTWDLMRRVNMQGDVPWLLGGDLNEILWDNEKSGGPPKSYK 301
+++WR TG YG E S + +W L++ + Q +PW++ GD NEIL ++EK G ++
Sbjct: 265 NKTWRITGFYGCPERSGRLDSWKLLKHLGDQNRLPWVVIGDFNEILGNSEKMGKALRAES 324
Query: 302 FLTNFREALDNCELSDLGFSGSTFTWQGKRNNY-IIRERLYRFLCNDAFWDLFSFLRVSH 350
+ +FREAL+ L DLGF G +TW +R I+ERL R + N + ++FS V H
Sbjct: 325 QMASFREALEFHSLRDLGFRGQWYTWDNRRLGLENIKERLDRAVANPEWTNIFSEAGVQH 384
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A2N9F086 | 1.7e-45 | 40.83 | Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=F... | [more] |
A0A803Q9W0 | 4.3e-44 | 33.45 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
A0A2P6SDG4 | 5.6e-44 | 34.33 | Putative RNA-directed DNA polymerase OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr1... | [more] |
A0A803PTM0 | 9.6e-44 | 36.24 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
A0A2N9G3M9 | 1.6e-43 | 29.93 | CCHC-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS2183... | [more] |
Match Name | E-value | Identity | Description | |