HG10017926 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10017926
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionReverse transcriptase domain-containing protein
LocationChr03: 26172775 .. 26174678 (-)
RNA-Seq ExpressionHG10017926
SyntenyHG10017926
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTAGGAAACTTAGGGATGCAATTGGCTCATTTCTCGATGTTGAGTGCGAGCAGGATGGTCTGTGTTGGGGTGACTCGATGAGCCTTAAAGTTCAACTTGATATTTCAGAACCTCTTTGTAGAGGAATCAAAGTTCGGATGTCTGATAAGGCAATCGATAGATGGGTTAAAATTCGTTATGAGACTCCCGGAATTCTGCTACGGTTGTGGTCGTATTGGTCATGTTTTGAAGGATTGTAAATGTTCTGTCACACAAGATAACAGTCTTGGAGTGAATCTGCTTCAGTTTGGTCCGTGGCTGAAATTCCAGGGTACCCCTAAACTTACTAAGAAACCTGGCCCCTCTAAAGATTTATCAAATTCAGTTCAAGAACCCCCCAAGAATGGATTCTTCTCCTTTTGAAGGGAAGGAGATAGAAACTACTTCCTAGGACCATCAAGAAGAGGCTCAGTTGAATCAGTATCCTATAGACTTAAACATTCCTCATGAAGAGATTAGTCGATCAGATTTTGAAGGTTCTGGCATTCTTCCTTACCCTTGTAATCCTGCTACAAGAACTTCTGACCCTCCCCCCCCCCTCCCCTTCCGTTTCTGTCCCTCTGCCTTCTCTTTCTTTGGATCCCAATTTTTTAGATTTTTCCCCTGGTTCTTTCCCAGCGGCTTCTGAGTCTTTTTGTCCTTCCCCCCTTAAAAAAGGTAGGAAAAAGAAGTCTAAATTAGCTTCAATTTCTCCTTTAGTGCAGAGTTCTTTAGTAGATTCTAAGAGGAAATGGATGGACAATGATAGCTTCTCTTCTGTTAAAAGGAAAAAGGTTCGTGCTTGTTCTGAGGGGGCGGTCCTTGATGAGGTTACTGATTTTATGGCAGTGGCTGCAAGGCAGCCCTGCCTAGGGCCATGAAAATCATATGTTGGAATGCTAGAGGCTTGCGCAACCTTCGAGCATTCCGCTTCCTTGGTGACCTTGTCCGAAACACAAAACCAGATATTCTTTTCATCTCAAAAACCAAAGGTGGAGTTGATCTCTGCAACAGAATTAAATTCAGATACAGGTTTTATGGCTATTTCCCTATGTGTAGTGTGGGTTCAAGAGGTGGCCTTTGTCTTTTGTGGACGAGATCTGTCAATGTTGTTATCAAATCATTTTCTTCCCACCATATCGACTCTTTTGTTCATTGGAATGATAGATCTTGGAGGTTTACAGGTCTTTATGGTTACTCTGAATCTTCTAGAAAATATCTGACTTGGGATCTTATGAGAAGAGTGAACATGCAAGGTGATGTTCCTTGGTTGCTTGGAGGGGATTTGAATGAGATCCTGTGGGATAATGAAAAAAGTGGTGGCCCCCCTAAATCGTACAAGTTCTTAACAAATTTTAGAGAGGCTCTTGATAATTGCGAGTTGTCTGATCTTGGTTTCTCGGGTTCCACCTTTACTTGGCAAGGGAAAAGGAATAATTACATCATCCGTGAGAGGCTTTATAGGTTTTTGTGCAATGATGCGTTTTGGGATCTCTTCTCGTTTCTTAGAGTCTCTCATCTTGATTGGCTGTTTTCTAACCATATACCGATTAGAATTTTCATTGATACAAGAAAGAAACCAAGGTTAAGAAACAAAAATTCTTTTAAATTCGAAGAAGTATGGCTCTAGATAGAGGAATGTAGGAAGATCATTTCTAATGAAGGTTACTGGGACAGGCCAAGTAACATTACCTCCTTAAGTGAAAGTTTGGCTTTATGCTCTAAGTCTCTTTCCAGATGGGGTAAGGACACCTTCAAAGTGTTAAGTGCGAAAATTAAGGACTGTAAAAGAGCTCTTCAAGCTGCGTATGATGGTCCCTCTGTAGCTGATTACAATCAGGTTCATGAAGTTGAATTCAAACTTGAGAGACTGCGAGGATGA

mRNA sequence

ATGGCTAGGAAACTTAGGGATGCAATTGGCTCATTTCTCGATGTTGAGTGCGAGCAGGATGGTCTGTGTTGGGGTGACTCGATGAGCCTTAAAGTTCAACTTGATATTTCAGAACCTCTTTGTAGAGGAATCAAAGTTCGGATGTCTGATAAGGCAATCGATAGATGGGTTAAAATTCGTTATGAGACTCCCGGAATTCTGCTACGGTTGTGGTCGTATTGGTCATGTTTTGAAGGATTTGGCTGCAAGGCAGCCCTGCCTAGGGCCATGAAAATCATATGTTGGAATGCTAGAGGCTTGCGCAACCTTCGAGCATTCCGCTTCCTTGGTGACCTTGTCCGAAACACAAAACCAGATATTCTTTTCATCTCAAAAACCAAAGGTGGAGTTGATCTCTGCAACAGAATTAAATTCAGATACAGGTTTTATGGCTATTTCCCTATGTGTAGTGTGGGTTCAAGAGGTGGCCTTTGTCTTTTGTGGACGAGATCTGTCAATGTTGTTATCAAATCATTTTCTTCCCACCATATCGACTCTTTTGTTCATTGGAATGATAGATCTTGGAGGTTTACAGGTCTTTATGGTTACTCTGAATCTTCTAGAAAATATCTGACTTGGGATCTTATGAGAAGAGTGAACATGCAAGGTGATGTTCCTTGGTTGCTTGGAGGGGATTTGAATGAGATCCTGTGGGATAATGAAAAAAGTGGTGGCCCCCCTAAATCGTACAAGTTCTTAACAAATTTTAGAGAGGCTCTTGATAATTGCGAGTTGTCTGATCTTGGTTTCTCGGGTTCCACCTTTACTTGGCAAGGGAAAAGGAATAATTACATCATCCGTGAGAGGCTTTATAGGTTTTTGTGCAATGATGCGTTTTGGGATCTCTTCTCGTTTCTTAGAGTCTCTCATCTTGATTGGCTGTTTTCTAACCATATACCGATTAGAATTTTCATTGATACAAGAAAGAAACCAAGATGGGGTAAGGACACCTTCAAAGTGTTAAGTGCGAAAATTAAGGACTGTAAAAGAGCTCTTCAAGCTGCGTATGATGGTCCCTCTGTAGCTGATTACAATCAGGTTCATGAAGTTGAATTCAAACTTGAGAGACTGCGAGGATGA

Coding sequence (CDS)

ATGGCTAGGAAACTTAGGGATGCAATTGGCTCATTTCTCGATGTTGAGTGCGAGCAGGATGGTCTGTGTTGGGGTGACTCGATGAGCCTTAAAGTTCAACTTGATATTTCAGAACCTCTTTGTAGAGGAATCAAAGTTCGGATGTCTGATAAGGCAATCGATAGATGGGTTAAAATTCGTTATGAGACTCCCGGAATTCTGCTACGGTTGTGGTCGTATTGGTCATGTTTTGAAGGATTTGGCTGCAAGGCAGCCCTGCCTAGGGCCATGAAAATCATATGTTGGAATGCTAGAGGCTTGCGCAACCTTCGAGCATTCCGCTTCCTTGGTGACCTTGTCCGAAACACAAAACCAGATATTCTTTTCATCTCAAAAACCAAAGGTGGAGTTGATCTCTGCAACAGAATTAAATTCAGATACAGGTTTTATGGCTATTTCCCTATGTGTAGTGTGGGTTCAAGAGGTGGCCTTTGTCTTTTGTGGACGAGATCTGTCAATGTTGTTATCAAATCATTTTCTTCCCACCATATCGACTCTTTTGTTCATTGGAATGATAGATCTTGGAGGTTTACAGGTCTTTATGGTTACTCTGAATCTTCTAGAAAATATCTGACTTGGGATCTTATGAGAAGAGTGAACATGCAAGGTGATGTTCCTTGGTTGCTTGGAGGGGATTTGAATGAGATCCTGTGGGATAATGAAAAAAGTGGTGGCCCCCCTAAATCGTACAAGTTCTTAACAAATTTTAGAGAGGCTCTTGATAATTGCGAGTTGTCTGATCTTGGTTTCTCGGGTTCCACCTTTACTTGGCAAGGGAAAAGGAATAATTACATCATCCGTGAGAGGCTTTATAGGTTTTTGTGCAATGATGCGTTTTGGGATCTCTTCTCGTTTCTTAGAGTCTCTCATCTTGATTGGCTGTTTTCTAACCATATACCGATTAGAATTTTCATTGATACAAGAAAGAAACCAAGATGGGGTAAGGACACCTTCAAAGTGTTAAGTGCGAAAATTAAGGACTGTAAAAGAGCTCTTCAAGCTGCGTATGATGGTCCCTCTGTAGCTGATTACAATCAGGTTCATGAAGTTGAATTCAAACTTGAGAGACTGCGAGGATGA

Protein sequence

MARKLRDAIGSFLDVECEQDGLCWGDSMSLKVQLDISEPLCRGIKVRMSDKAIDRWVKIRYETPGILLRLWSYWSCFEGFGCKAALPRAMKIICWNARGLRNLRAFRFLGDLVRNTKPDILFISKTKGGVDLCNRIKFRYRFYGYFPMCSVGSRGGLCLLWTRSVNVVIKSFSSHHIDSFVHWNDRSWRFTGLYGYSESSRKYLTWDLMRRVNMQGDVPWLLGGDLNEILWDNEKSGGPPKSYKFLTNFREALDNCELSDLGFSGSTFTWQGKRNNYIIRERLYRFLCNDAFWDLFSFLRVSHLDWLFSNHIPIRIFIDTRKKPRWGKDTFKVLSAKIKDCKRALQAAYDGPSVADYNQVHEVEFKLERLRG
Homology
BLAST of HG10017926 vs. NCBI nr
Match: KAF5449841.1 (hypothetical protein F2P56_030246 [Juglans regia])

HSP 1 Score: 207.2 bits (526), Expect = 2.4e-49
Identity = 100/227 (44.05%), Postives = 138/227 (60.79%), Query Frame = 0

Query: 90  MKIICWNARGLRNLRAFRFLGDLVRNTKPDILFISKTKGGVDLCNRIKFRYRFYGYFPMC 149
           MKI+CWN+ GL N +  R L DL+    PD++F+ +TK         K+++ F   F + 
Sbjct: 1   MKILCWNSSGLGNPQGIRALRDLITREDPDLVFLQETKMRAQAMTTCKYKFGFVNCFFVD 60

Query: 150 SVGSRGGLCLLWTRSVNVVIKSFSSHHIDSFVHWND-RSWRFTGLYGYSESSRKYLTWDL 209
            VG  GGL LLW R ++V I SFS +HID+ +  +D   WRFTG+YG+ ++S +YLTW+L
Sbjct: 61  CVGRSGGLSLLWKREISVSISSFSRYHIDACIQESDLAEWRFTGVYGHPDASNRYLTWNL 120

Query: 210 MRRVNMQGDVPWLLGGDLNEILWDNEKSGGPPKSYKFLTNFREALDNCELSDLGFSGSTF 269
           MR +      PWL+GGD NE+L+ +EK GG P  Y  L NFR  +++C L DLGF G  F
Sbjct: 121 MRTLCPSTSGPWLVGGDFNEVLYLHEKRGGRPWPYAQLENFRAVMEDCALQDLGFQGPRF 180

Query: 270 TW-QGKRNNYIIRERLYRFLCNDAFWDLFSFLRVSHLDWLFSNHIPI 315
           TW  G+     I ERL RF  N   W++F   RV H    +S+H+PI
Sbjct: 181 TWCNGRTGIQRISERLDRFFGNQQLWEVFPKERVRHGVITYSDHLPI 227

BLAST of HG10017926 vs. NCBI nr
Match: KAF5464386.1 (hypothetical protein F2P56_014464 [Juglans regia])

HSP 1 Score: 204.1 bits (518), Expect = 2.0e-48
Identity = 107/266 (40.23%), Postives = 152/266 (57.14%), Query Frame = 0

Query: 90  MKIICWNARGLRNLRAFRFLGDLVRNTKPDILFISKTKGGVDLCNRIKFRYRFYGYFPMC 149
           M ++ WN RGL N R  R L DLVR   P +LF+ +TK       ++K+R  +     + 
Sbjct: 1   MSLLSWNTRGLGNPRGVRALSDLVREEDPMVLFLQETKLSEKGMEKLKYRLGYKNCLAVS 60

Query: 150 SVGSRGGLCLLWTRSVNVVIKSFSSHHIDSFVHWN---DRSWRFTGLYGYSESSRKYLTW 209
           S G  GG+ LLW   VN+VIK++S  HI + +  N   D SW FTG+YG  + SR++ TW
Sbjct: 61  SEGRSGGIALLWKNDVNIVIKNYSRSHIHATLQDNTTADDSWFFTGVYGQPDPSRRHETW 120

Query: 210 DLMRRVNMQGDVPWLLGGDLNEILWDNEKSGGPPKSYKFLTNFREALDNCELSDLGFSGS 269
           +L+R + +  D  WLL GD NE+L  NEK GG  ++ K +  F E +D+CEL DLGF G+
Sbjct: 121 NLLRSLKVPSDKGWLLMGDFNEVLSPNEKCGGRIRTDKQIQAFSEVIDDCELLDLGFKGN 180

Query: 270 TFTWQGKRN-NYIIRERLYRFLCNDAFWDLFSFLRVSHLDWLFSNHIPIRIFIDTRKKPR 329
            FTW  KR     I ERL R L N  +  LF    VSH    +S+H+PI++ +   + PR
Sbjct: 181 PFTWCNKREPAQCISERLDRCLANLKWKALFKMASVSHGSVAYSDHVPIKLQLQVNRMPR 240

Query: 330 WGKDTFK--VLSAKIKDCKRALQAAY 350
            GK  F+   +  + K CK  ++ A+
Sbjct: 241 KGKKLFRFEAMWVEEKSCKTIIEKAW 266

BLAST of HG10017926 vs. NCBI nr
Match: KAF5443558.1 (hypothetical protein F2P56_036105, partial [Juglans regia])

HSP 1 Score: 199.9 bits (507), Expect = 3.8e-47
Identity = 100/227 (44.05%), Postives = 134/227 (59.03%), Query Frame = 0

Query: 90  MKIICWNARGLRNLRAFRFLGDLVRNTKPDILFISKTKGGVDLCNRIKFRYRFYGYFPMC 149
           MK++CWN+RGL N +  R L DL+ N  P ++F+ +TK         KFR      F + 
Sbjct: 1   MKLLCWNSRGLGNPQGIRVLRDLITNEDPSLVFLQETKLKARAMENCKFRLHLTHCFTVD 60

Query: 150 SVGSRGGLCLLWTRSVNVVIKSFSSHHIDSFVHWND-RSWRFTGLYGYSESSRKYLTWDL 209
            VG  GGL LLW   + V ++SFS HHID+ +   D   WRFTG+YG  E   +YLTW+L
Sbjct: 61  CVGRSGGLSLLWKGDLRVRVQSFSLHHIDALIQDGDGPEWRFTGVYGNPEVVNRYLTWNL 120

Query: 210 MRRVNMQGDVPWLLGGDLNEILWDNEKSGGPPKSYKFLTNFREALDNCELSDLGFSGSTF 269
           +RR+N   D PWL+GGD NE+L  NEK GG P+S   +  FR  + +C L DLGF G  +
Sbjct: 121 LRRLNSGVDGPWLVGGDFNELLHFNEKRGGRPRSENQMEAFRNVIFDCSLRDLGFRGPKY 180

Query: 270 TW-QGKRNNYIIRERLYRFLCNDAFWDLFSFLRVSHLDWLFSNHIPI 315
           TW  G+  +  I ERL RFL N+ F  LF    V H    +S+H+P+
Sbjct: 181 TWCNGRAGSRAISERLDRFLGNNQFCALFPQFVVRHGMAAYSDHLPV 227

BLAST of HG10017926 vs. NCBI nr
Match: XP_042950313.1 (uncharacterized protein LOC122282426 [Carya illinoinensis])

HSP 1 Score: 194.9 bits (494), Expect = 1.2e-45
Identity = 100/227 (44.05%), Postives = 134/227 (59.03%), Query Frame = 0

Query: 90  MKIICWNARGLRNLRAFRFLGDLVRNTKPDILFISKTKGGVDLCNRIKFRYRFYGYFPMC 149
           MK ICWN+RGL N    R L DL+    PD+LF+ +TK      + +K +  F   F + 
Sbjct: 1   MKTICWNSRGLGNPSGIRALRDLIAREGPDLLFLQETKLSTKGMDALKCKLGFVNCFSVD 60

Query: 150 SVGSRGGLCLLWTRSVNVVIKSFSSHHIDSFVHWND-RSWRFTGLYGYSESSRKYLTWDL 209
           S G  GGL LLW   + V ++SFS +HID  +  +D   WRFTGLYG+ ++SR+  TW+L
Sbjct: 61  SEGRSGGLGLLWNSDLGVELRSFSQYHIDVHIKIDDLMVWRFTGLYGHPDTSRRTFTWNL 120

Query: 210 MRRVNMQGDVPWLLGGDLNEILWDNEKSGGPPKSYKFLTNFREALDNCELSDLGFSGSTF 269
           +R ++    +PWL+GGDLNE+L  +EK GG  +    +  FRE L  CEL DLG+ G  F
Sbjct: 121 IRTLSSIEQLPWLVGGDLNEVLHPHEKRGGRDRPVSQIEAFREVLTECELRDLGYKGQRF 180

Query: 270 T-WQGKRNNYIIRERLYRFLCNDAFWDLFSFLRVSHLDWLFSNHIPI 315
           T W G+  N  I E L RF+ ND    LF  L V H +   S+HIPI
Sbjct: 181 TWWNGRGGNAHIFEHLDRFVGNDLLTHLFPHLVVQHGNVAHSDHIPI 227

BLAST of HG10017926 vs. NCBI nr
Match: XP_042980077.1 (uncharacterized protein LOC122310261 [Carya illinoinensis])

HSP 1 Score: 193.0 bits (489), Expect = 4.7e-45
Identity = 105/265 (39.62%), Postives = 150/265 (56.60%), Query Frame = 0

Query: 90  MKIICWNARGLRNLRAFRFLGDLVRNTKPDILFISKTKGGVDLCNRIKFRYRFYGYFPMC 149
           MK ICWN+ GL N    R L DL+    PD+LF+ +TK      + +K +  F   F + 
Sbjct: 1   MKTICWNSCGLGNPSGIRALRDLIAREGPDLLFLQETKLLTKGMDTLKRKLGFVNCFSVD 60

Query: 150 SVGSRGGLCLLWTRSVNVVIKSFSSHHIDSFVHWND-RSWRFTGLYGYSESSRKYLTWDL 209
           S G  GGL LLW   + V ++SFS +HID  +  +D   WRFTGLYG+ ++ R+  TW+L
Sbjct: 61  SEGRSGGLGLLWNSDLRVELRSFSKYHIDVHIKMDDLMVWRFTGLYGHPDALRRTFTWNL 120

Query: 210 MRRVNMQGDVPWLLGGDLNEILWDNEKSGGPPKSYKFLTNFREALDNCELSDLGFSGSTF 269
           +R ++    +PWL+GGDLNE+L  +EK GG  +    +  FRE L  CEL DLG+ G  F
Sbjct: 121 IRTLSSIEQIPWLVGGDLNEVLHPHEKRGGRDRPVSQIEAFREVLTECELRDLGYKGQRF 180

Query: 270 T-WQGKRNNYIIRERLYRFLCNDAFWDLFSFLRVSHLDWLFSNHIPIRIFIDTRKKP--- 329
           T W G+  N  I ERL RF+ ND    LF  L V H +   S+HIPI +F  +  +P   
Sbjct: 181 TWWNGRGGNAYIFERLDRFVGNDLLTHLFPHLVVQHGNVAHSDHIPI-LFESSNFQPMPR 240

Query: 330 RWGKDTFKVLSAKIKDCKRALQAAY 350
           R  +  F+ +    + C+R ++  +
Sbjct: 241 RPKQFRFEAMWVGEEQCERIIEQVW 264

BLAST of HG10017926 vs. ExPASy TrEMBL
Match: A0A2N9F086 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS8394 PE=4 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 1.7e-45
Identity = 98/240 (40.83%), Postives = 135/240 (56.25%), Query Frame = 0

Query: 79  GFGCKAALPRAMKIICWNARGLRNLRAFRFLGDLVRNTKPDILFISKTKGGVDLCNRIKF 138
           G GC  A P  M+II WN RGL N  A R L  LV+   P++LF+ +TK       R + 
Sbjct: 19  GGGCSTAPPETMRIISWNCRGLGNPDAVRSLHMLVKTQGPEVLFLMETKLETSSMERFRV 78

Query: 139 RYRFYGYFPMCSVGSRGGLCLLWTRSVNVVIKSFSSHHIDSFVHW-NDRSWRFTGLYGYS 198
              F   F + S+G  GGL + W   +N+ IK++++HHID ++   ND  WR TG YG  
Sbjct: 79  SLGFNSVFVVPSLGRSGGLAMFWKDGINLEIKNYTTHHIDCYIRQRNDMGWRLTGFYGRP 138

Query: 199 ESSRKYLTWDLMRRVNMQGDVPWLLGGDLNEILWDNEKSGGPPKSYKFLTNFREALDNCE 258
           E  R++ +W LM ++N  G  PWL  GD NEI++ NEK G  P+  + +  FRE L  C 
Sbjct: 139 EDFRRWESWALMDQLNGLGQNPWLCCGDFNEIMYQNEKRGMHPRPLRRMWEFREVLSRCN 198

Query: 259 LSDLGFSGSTFTWQGKRNNYI-IRERLYRFLCNDAFWDLFSFLRVSHLDWLFSNHIPIRI 317
           L D+G+ G  FTW   R     ++ERL R L + A+ DLF    VSH+    S+H+PI I
Sbjct: 199 LIDMGYRGYDFTWDNNRRGVANVQERLDRALSSPAWTDLFPNSTVSHIWSSTSDHMPILI 258

BLAST of HG10017926 vs. ExPASy TrEMBL
Match: A0A803Q9W0 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 4.3e-44
Identity = 97/290 (33.45%), Postives = 160/290 (55.17%), Query Frame = 0

Query: 82  CKAALPRAMKIICWNARGLRNLRAFRFLGDLVRNTKPDILFISKTKGGVDLCNRIKFRYR 141
           C A  PR M  + WN +GL N      L ++V++ +P I+F+S+T+   +    I+ R  
Sbjct: 427 CWAGSPRTMNSLFWNVQGLGNPWTTTALANIVKDHQPGIVFLSETRSKSNYLETIRIRLG 486

Query: 142 FYGYFPMCSVGSRGGLCLLWTRSVNVVIKSFSSHHIDSFVH-WNDRSWRFTGLYGYSESS 201
           F G F + + G  GGL LLW     V + SF+  HID++++   D +WRFTG YG  + S
Sbjct: 487 FEGCFCVDAKGKSGGLALLWKEPFTVHLNSFNDFHIDAWINKEEDLAWRFTGFYGDPDPS 546

Query: 202 RKYLTWDLMRRVNMQGDVPWLLGGDLNEILWDNEKSGGPPKSYKFLTNFREALDNCELSD 261
           ++  +W L++R+    + PWL GGD NEI   +EK GG  K    + NF  A+D C L +
Sbjct: 547 QRKHSWQLLKRIARNHNGPWLCGGDFNEIRGIHEKLGGGGKPGYLMKNFNHAIDTCALRE 606

Query: 262 LGFSGSTFTWQGKRNNYIIRERLYRFLCNDAFWDLFSFLRVSHLDWLFSNHIPIRIFIDT 321
           + + GS FTW   R   +I ERL R + N+ +W +++  +V HL    S+H P+ +  +T
Sbjct: 607 IDYEGSQFTWCNGRAANMIYERLDRVMVNNNWWKIYAIAKVKHLSRWCSDHSPLLLTFNT 666

Query: 322 -----RKKPRWG-KDTFKVLSAKIKDCKRALQAAY-DGPSVADYNQVHEV 364
                +KK RWG +  ++   A  ++C++ ++  + +G S+     + E+
Sbjct: 667 IPCGDQKKQRWGYRFHYEKAWADKEECQKIIEDIWKEGNSITSATDLDEI 716

BLAST of HG10017926 vs. ExPASy TrEMBL
Match: A0A2P6SDG4 (Putative RNA-directed DNA polymerase OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr1g0340391 PE=4 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 5.6e-44
Identity = 103/300 (34.33%), Postives = 166/300 (55.33%), Query Frame = 0

Query: 90  MKIICWNARGLRNLRAFRFLGDLVRNTKPDILFISKTKGGVDLCNRIKFRYRFYGYFPM- 149
           M ++CWN +G+ N      L  +V    P ++F+SKT+   D    ++ R  +   F + 
Sbjct: 1   MNVLCWNCQGIGNPWTVSGLKGIVSLNLPSVIFLSKTRCTADEMKGVRERLGWKHAFSVN 60

Query: 150 CS---------VGSRGGLCLLWTRSVNVVIKSFSSHHIDSFV--HWNDRSWRFTGLYGYS 209
           CS         V   GGLCLLW     V ++S+S++HID  +    + R WRFTG+YG+ 
Sbjct: 61  CSFVKKKKGKGVSRSGGLCLLWNDDTKVSLQSYSNNHIDVVIGEEGDPRCWRFTGVYGFP 120

Query: 210 ESSRKYLTWDLMRRVNMQGDVPWLLGGDLNEILWDNEKSGGPPKSYKFLTNFREALDNCE 269
           ++  +  TW+L+++++M G++PW++GGD NEI   ++K GG  +S + + + +EAL  CE
Sbjct: 121 KAGERSRTWNLLKQLSMHGNLPWVVGGDYNEICERSDKMGGVLRSVRLMNDMKEALVFCE 180

Query: 270 LSDLGFSGSTFTWQGKRNNYIIRERLYRFLCNDAFWDLFSFLRVSHLDWLFSNHIPIRIF 329
           L D+ F G  FTW+G R    +R RL RF C+  + DLF   RV HLD   S+H+PI + 
Sbjct: 181 LDDIQFVGPRFTWRGIRGGEEVRVRLDRFTCSLPWRDLFPASRVRHLDPSTSDHVPILLE 240

Query: 330 IDTRKKPR--WGKDTFKVLSAKIKD--CKRALQAAYD-----GPSVADYNQVHEVEFKLE 369
           +  +KK R    K  FK     + D  CK  ++++++     GP+   +N++      LE
Sbjct: 241 VRIQKKRRKKRKKKRFKFEECWLLDETCKEVVKSSWESVSGVGPTQLLWNRMQSTRAALE 300

BLAST of HG10017926 vs. ExPASy TrEMBL
Match: A0A803PTM0 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 9.6e-44
Identity = 104/287 (36.24%), Postives = 155/287 (54.01%), Query Frame = 0

Query: 90  MKIICWNARGLRNLRAFRFLGDLVRNTKPDILFISKTKGGVDLCNRIKFRYRFYGYFPMC 149
           M ++ WNA+GL N    R L  LV N  P ++FI+++K G      ++ +  F G F + 
Sbjct: 1   MNLLIWNAQGLGNPWTERSLASLVTNFSPQMIFIAESKIGKVRAESLRVKLGFVGCFVVE 60

Query: 150 SVGSRGGLCLLWTRSVNVVIKSFSSHHIDSFVH-WNDRSWRFTGLYGYSESSRKYLTWDL 209
           + G  GGL LLW+  V   + SFS  HIDSFV   N + WRFTG YG  + S++  +W L
Sbjct: 61  ARGKSGGLILLWSMDVETQVLSFSPFHIDSFVRIENGQWWRFTGFYGDPDPSQRCHSWKL 120

Query: 210 MRRVNMQGDVPWLLGGDLNEILWDNEKSGGPPKSYKFLTNFREALDNCELSDLGFSGSTF 269
           +RR++     PW +GGD NEI+   EK GG PK    + NFR+ALD+C L D  + GS +
Sbjct: 121 LRRISRMYSGPWAVGGDFNEIVSQKEKMGGLPKPRYLINNFRKALDSCHLRDGCYEGSEY 180

Query: 270 TWQGKRNNYIIRERLYRFLCNDAFWDLFSFLRVSHLDWLFSNHIPIRIF-----IDTRKK 329
           TW   R N +I ERL R   N  ++D+F  ++V HLD   S+H  + +      +    K
Sbjct: 181 TWCNGRKNDLIFERLNRVCGNLEWFDMFPSMKVRHLDRTNSDHCALLLMEYDPHVQHHNK 240

Query: 330 PRW-GKDTFKVLSAKIKDCKRALQAAYDGPSVADYNQVHEVEFKLER 370
            RW  +  F+   A+  +C   +Q A+      + +   E++ +L R
Sbjct: 241 TRWRTRFHFESAWAEDNECANIVQLAWQHEK--EVSNTRELQSRLGR 285

BLAST of HG10017926 vs. ExPASy TrEMBL
Match: A0A2N9G3M9 (CCHC-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS21832 PE=4 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 1.6e-43
Identity = 123/411 (29.93%), Postives = 199/411 (48.42%), Query Frame = 0

Query: 2   ARKLRDAIGSFLDVECEQDGLCWGDSMSLKVQLDISEPLCRGIKVRMSDKAIDRWVKIRY 61
           A  + +A+G   +++  +DG+ WG+ M ++V++D+S PL R  +V++  K    WV ++Y
Sbjct: 25  ATSVGNALGVLEEIDIPEDGITWGEFMRVQVRIDVSMPLLRRQRVKLG-KEESIWVTLKY 84

Query: 62  E-------TPGIL------LRL-----------------W-------------------- 121
           E         GIL       RL                 W                    
Sbjct: 85  EKLPTFCYNCGILGHSERECRLVTQHEKSKDGNHYEYGSWLRATPGRRKTGSVTFEGAFP 144

Query: 122 -----SYWSCFEGFGCKAALPRAMKIICWNARGLRNLRAFRFLGDLVRNTKPDILFISKT 181
                 Y +   G GCKAA P AM I+ WN +GL N    R L +LV+   P ILF+ +T
Sbjct: 145 KRNGIVYHNQLNGGGCKAASPTAMSILSWNCQGLGNPWTVRHLHELVKENNPSILFLMET 204

Query: 182 KGGVDLCNRIKFRYRFYGYFPMCSVGSRGGLCLLWTRSVNVVIKSFSSHHIDSFVHWN-- 241
           +       +++ R RF   F +     +GGL + W     + IK FS +HID+ V     
Sbjct: 205 RMKAVEMEKVRQRLRFNFVFSVPCQRRKGGLAMFWKDLDALEIKKFSQNHIDATVMEKSL 264

Query: 242 DRSWRFTGLYGYSESSRKYLTWDLMRRVNMQGDVPWLLGGDLNEILWDNEKSGGPPKSYK 301
           +++WR TG YG  E S +  +W L++ +  Q  +PW++ GD NEIL ++EK G   ++  
Sbjct: 265 NKTWRITGFYGCPERSGRLDSWKLLKHLGDQNRLPWVVIGDFNEILGNSEKMGKALRAES 324

Query: 302 FLTNFREALDNCELSDLGFSGSTFTWQGKRNNY-IIRERLYRFLCNDAFWDLFSFLRVSH 350
            + +FREAL+   L DLGF G  +TW  +R     I+ERL R + N  + ++FS   V H
Sbjct: 325 QMASFREALEFHSLRDLGFRGQWYTWDNRRLGLENIKERLDRAVANPEWTNIFSEAGVQH 384

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAF5449841.12.4e-4944.05hypothetical protein F2P56_030246 [Juglans regia][more]
KAF5464386.12.0e-4840.23hypothetical protein F2P56_014464 [Juglans regia][more]
KAF5443558.13.8e-4744.05hypothetical protein F2P56_036105, partial [Juglans regia][more]
XP_042950313.11.2e-4544.05uncharacterized protein LOC122282426 [Carya illinoinensis][more]
XP_042980077.14.7e-4539.62uncharacterized protein LOC122310261 [Carya illinoinensis][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A2N9F0861.7e-4540.83Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=F... [more]
A0A803Q9W04.3e-4433.45Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A2P6SDG45.6e-4434.33Putative RNA-directed DNA polymerase OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr1... [more]
A0A803PTM09.6e-4436.24Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A2N9G3M91.6e-4329.93CCHC-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS2183... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036691Endonuclease/exonuclease/phosphatase superfamilyGENE3D3.60.10.10Endonuclease/exonuclease/phosphatasecoord: 87..318
e-value: 4.6E-27
score: 97.3
IPR036691Endonuclease/exonuclease/phosphatase superfamilySUPERFAMILY56219DNase I-likecoord: 88..318
NoneNo IPR availablePANTHERPTHR33710BNAC02G09200D PROTEINcoord: 172..333
NoneNo IPR availablePANTHERPTHR33710:SF41BNAC03G48920D PROTEINcoord: 172..333

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10017926.1HG10017926.1mRNA