HG10017770 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10017770
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
LocationChr03: 21825115 .. 21829508 (-)
RNA-Seq ExpressionHG10017770
SyntenyHG10017770
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACTTAACCAATATGGCCAGTGAAGACGAGGAGGACGAGGACCAAGCTGCTCGTTCATCAAGGAATGTAAAAAGGAAGATAGCAGATGAACTAGATAGTGTCATGAAGGCTAGTCTAGAGAGAAAGGTTATGGAAACATCTCATTTTTCTAACCCACTTCACCACAACAATAGGGATTCTTCACCTGTTACTACTCCACCTGCAATGTCATATTCAGGTTATGCAAAATTTAAGGTATGTTGTAGGAATGTTAAGTAAATTTATTTATTTGATTCAAGGTATGGAAACAAGTTTACAATTAGTACCTTTATTGAATCCTTCGTTGGGTATGATTGTAGGCAAAAAGCAAAAAATTTAAGGAGATGAAAAAAAGCAACTTCCTCGCACTTGTAGTCATAGAGGCTGATATATGTCAAAAAGTGCATATTTTTACCATATATTTTATTACTTTTTTATAGTAAAAAGATACTTTATGTGATATTTTGACCCCGGAATGCCCAAAATTAGTTAAAATAAGCTTAATAGGGGATAATTATGCTTAAAAGCTGTTATTTGCTGATTTAGTGCTGATTTGGTGAATTTTGTCAAGTTTCTGGCCATTTTTGTAGATTTTCTATCTGATGTGCCCATAGTAGTAAGAGATGTACCAGCCCTGTCGATGTGGCCGCATCAGATGTGTTATAACCGCATCAGAAGAGATGCGCCTACATTACTGAGCCCAGTTTTTTTAGATTCGCGCCTAGTCAATTGTAGTTGCTATTTTCTCAATCAAAATTGTTATTCAACCCCTAAAAAGCTGGAAAATCGTTCAACACATAATTTTAGGCCATATCTCAACCACCTTGGCCTATATAAAGGAGGAGCACCCTTCCAATTGAAAAATCAACTCTCCATCTACGATTTCACCACACTTTTCTCTACAATTACACCATTGTCGTCAGCCCTCTAGTCTTAAGAACGAAAGTTCCTCTGAGACGTAGCGGCTCTAAGTAATCTCATCCCGTGAAAGCGTGTGGTGAGAAACGATTCTTCCTGAAGAAAGAAGAATCAACCTAGGGAAAAACTAAAGAATTGAGGACTTGTCCCAAGACCTCTTGAGTTGTATTTTTCTAGCATTTATATTCATTTATTTCTTGTACTTTTCTCTTTTCTTTTCATCCGTTGAACATCATCTTCTAGCTATGATTTTTTATTCAATAAAGTTTATTATTTTATCATTAGTCATGAGCTAAATTCTCTAAGAGGTTCAGTTATGTGGATACCCTAGAATTTTATGACTAAAGCAATGTTTATGCTTCATACCTTTTTGTCTTATGCATTTTCTTTGTTGAGATTATAGAAAATATTGTTAAGTTAAACTGATCACTTAATTTAGCAATCTAATAGAGTCCTAATGCTGAAAAGGTTAGGATATAAACCGATGTCACAAAGGAATACAGGACTAAGAGCCTAGAAATAGGATGGTCATGTCGCCTTAGAAATAAAGGATACCGTAGGATAAAGAATTTAAGCTTGAACTAATCTAAGATCCAGCTAACCATGAAAACATTAGGCATTAGCTACTTAGATCTCCTAAAGGAACTTGACACAAGATCGAATAGGAGTAGTTTTTTGTTCATGTATATTTCATTGTCTTGGTATGATACAGTCACATCACTTATAACATAGAACCTGAAAGGTTAGAACATAACTGCATCCCTGTTCAACATTTTTGTTTACTGCTTTTATCATTATTCAACCTCAAAATCACCGACTGGGGGTTATACAAACATTCACTAGCTAAATGATTAGCAGTACAAAATTCACATGTTTGAGGATGAGGATCTGTTTGAACAGTAGCCACTTTCTGTGGTCCTATAACCAGAATATGTAACCTATTTCCTATGGTCGTTAGCTGTTGATTCATAGATGCGAGTGTATCAACTTCTTGTATCTCCGTCACCATCTTTGTGTTAGGAGTGTACTCCATATATCCCCAATTCTGATTGTTGTTGGCAATGGTATCCATGATCTCTTGTGCTTCATTTGCAAATTTCTTAAGCCATGACCCTCATGCGAATGTATTCACCATTGTCTTTGAGGCTTGATTTAACCCATTGTAGAATTGTTCCATCACAATGCAAGCTGGGAGTCCGTGATGTGGGCATTTTCATACCAACCTTTGGAATTTAAGCGAAGCTACATCCAAAGATTCTGATGGTGCTTGCCTGAAAGTTATGATATCACCTCTATATTTGGCATTCTTGTCAGGTGGGAAGTATTTTCCTAGAAATTTGTCTACGAGGTTATCTTATGTGGTGATGGAATTAGGTTGCAATAAGTCAAGCCATGCTTATACATCTCCCTGCAAGGAGTAAGGAAACAACTTAAGTCTTAATGCCTCCTCAGAAACACCATTAACTTTAAAAGAGCGACAAATTCTCATAAAAAGTTTGAGATGTTTGTGGGGGTCTTTATTGGGTAGTCCGACAAATTGACAAAATGAGTTCAACATCTGAAACATCAACGGTTTCATTTCAAATGTGGGCACATCGGTTGGTGGGTTAAGGATGCCAGTATCCAAAGTGTGAAATGTGGGCGCAGCATAGTCTCCGATTGCTCTATCTCTATCATCTGCTATGAAGATGGGGTTTCGTGGGTCTACAGCAGGTTGTTGTTGTAGTTGTTGATCTCCATTCTACTGAACGTTATTCCGAAAAGGTATAGCAGGATCGTCTCTAAGCGGATCCATTGGAACTAGCTGCATGAATACGACTTCCTCAAGACTTACTTGTTCGCTAAACTCTTTCTCTTCTCGACGCTTTCGCCTTTGTTCATTCCTTCTTCTGCAAAAGGTCCTTTCTGTTTCAGGATCTGGCTAAAAAAGGAAAGGTCTTCTTCTCATACACTACTCATTCAACGTACACAATACAAAAATAATGTGTTAGATTTTTCTTGACACAGAGTCAATGTGGTCGCATTGATCAATCACAATCAATAAAAAAATAAACTACTACTAGTCCCCGGCACCAGCGCTAAAAACTTGATCGACCAGGCGTATATGAATGATAAAATGATAAGAAATAGGGTAAAATACACTTTTGGTCTCTGAAGTTTAAGATTGGTGTCTATTTGGTCCTTAAAGTTTTAAAATATGCAGTTTTAGTCCCTCAGGTTTGGAGGAAGCTTTTAAATGGTCCTTGAGTTGATTAGACCATTAGTTGACTAACGGAAATATTATGTGGCAGTTACTAATTTGCTGACTTGGCATATTATATTAATTTTATATTAGTTATTGATGATTTGGCATATGATTGGACAATTTCTCTTATTCTTTCTTGACCTCTTCCTATACCTTCCTCAGAAAACTTTACAGACATTGACTCATTCATTCACCATCTCTACTCTCTTTCTCCTTCTCTTCTCGTCTGCCCTCACTAGTTTTTTTTTCTCTTTCTCAACCTGTCACCCTCGATCTCATCTCTCTCATCTCACAACCCTCCTTCCCTCCGGCCATGCACCGCCGTCGTCGGTTAGGCAAAATCTAGGTGCAACATCATTCCAGTAGCCCTATTTTCCCCTATTTTGGCGTTCATCTATGTAACCCACGACCTATTGAACCTTGAATCGACTTACTGTTCGATCTCTTAATTCTCACGCAATTTGGAACACAGCAAGGGATTGAGTTCTCTTCGCAAATTTCATGGGCAACGACCATCTTTAAGCCCTTTTCAATTCAATTAAAAATTTTACGTTTGAGTATTAAATTTTGGAATTAACTCTATGGACAGTTTCAACTTGAAAAGATCCGTCAATTTTGGACTGTCCATTTGAAGTCGAAAGGCGACTTTGAATCAGAAATTTCTTCATTAATATTTGAATTAGTCATGATGAACAACAAAGAAAAGTCAAAGACGGTAGCCCAGCTCGATCGGTGGTATAACCTATCTCTTGTTCCTTCATTCAAGGATGAATCCTCCAACAAATTTTGCAGTTTCCCAATTGGTGTAAATTCCTTTGCCGTGAAACTGTGAGATGTGAGAAATTAGTTTATAGTTTTTTGCCTTTGTTTATTTCTTTTGTGAAATTGTTTGAATTGTTTTTGCATTGTGATTTTAGATGAATTTAAATTGACGTCAATTGATAAAACGAAGTCAGGATCGCTGAAAAAGACCAAGGAAAATAGGGTTACAGTTAAATTTTAGAATAATCAATTTGCCCTTCATTTCAAATAGAAAAATGGAGGAAATTTATTTCTTAGTTTCAATTACACCAGTGAGGGCCAACGAGGAGAGAAGGAGAAAGAGAGTAGAGAGATGGTAAATGAATGGGTCAATGTCTATACCCTGGAGGAAGGTATAGGAAGAGATCGAGAAAGAATAAGAGAAATTGTCCAATCATATGTCAAATGA

mRNA sequence

ATGGACTTAACCAATATGGCCAGTGAAGACGAGGAGGACGAGGACCAAGCTGCTCGTTCATCAAGGAATGTAAAAAGGAAGATAGCAGATGAACTAGATAGTGTCATGAAGGCTAGTCTAGAGAGAAAGGTTATGGAAACATCTCATTTTTCTAACCCACTTCACCACAACAATAGGGATTCTTCACCTGTTACTACTCCACCTGCAATGTCATATTCAGGTTATGCAAAATTTAAGAAAAATGGAGGAAATTTATTTCTTAGTTTCAATTACACCAGTGAGGGCCAACGAGGAGAGAAGGAGAAAGAGAGTAGAGAGATGGTAAATGAATGGGTCAATGTCTATACCCTGGAGGAAGGTATAGGAAGAGATCGAGAAAGAATAAGAGAAATTGTCCAATCATATGTCAAATGA

Coding sequence (CDS)

ATGGACTTAACCAATATGGCCAGTGAAGACGAGGAGGACGAGGACCAAGCTGCTCGTTCATCAAGGAATGTAAAAAGGAAGATAGCAGATGAACTAGATAGTGTCATGAAGGCTAGTCTAGAGAGAAAGGTTATGGAAACATCTCATTTTTCTAACCCACTTCACCACAACAATAGGGATTCTTCACCTGTTACTACTCCACCTGCAATGTCATATTCAGGTTATGCAAAATTTAAGAAAAATGGAGGAAATTTATTTCTTAGTTTCAATTACACCAGTGAGGGCCAACGAGGAGAGAAGGAGAAAGAGAGTAGAGAGATGGTAAATGAATGGGTCAATGTCTATACCCTGGAGGAAGGTATAGGAAGAGATCGAGAAAGAATAAGAGAAATTGTCCAATCATATGTCAAATGA

Protein sequence

MDLTNMASEDEEDEDQAARSSRNVKRKIADELDSVMKASLERKVMETSHFSNPLHHNNRDSSPVTTPPAMSYSGYAKFKKNGGNLFLSFNYTSEGQRGEKEKESREMVNEWVNVYTLEEGIGRDRERIREIVQSYVK
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 48..68
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..27
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 50..68

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10017770.1HG10017770.1mRNA