HG10017769 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10017769
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Nuclear transcription factor Y subunit
Location	Chr03: 21806953 .. 21811473 (+)
RNA-Seq Expression	HG10017769
Synteny	HG10017769

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGAGCTCTGAAATAGATTACAGAAACCGTCCAGATTGTGACTATCAGCAAACCACAAACTACACCACCGCTAATTCTCAATCTTGGAGGTGGCACGGCGGCGTACACGGCGGGGCCACCACTATTGCGGTCATGTCAAAAGAAGAGAAAGCAAATCGGGCTTGGTCCAAGGCCTTGGTTGGCAGTGTGCCAGGGCCCAAAACAAACACCAAGGAATTGCAAATAACTCTGTCTCCACCTCGAGGTAATTAAGGTTTAAATATAGAAACACCAGTGAATATAGCAATGAGGTCCAAAATATTATTTGCATGAATAATACAATACAATTTTTTTTATAAATATATATAAAAATTTAAATCAAGTTCTCAAAATCTATTAGTGATAGATTTTATTGCTAATAAAAATCTATCAAACAATAGAGTCTATCACTAATAGGAGCCTATCATCATTAATAGTTTTGCTATATTTGTAATTTTTTACAAATATTGCTTATTATCCTTAAAAGTCATATCAATTGCAATTACCCTAAAACGGATATGACTTTTGGTTGATGATTTCATTAAGTATATTCTCCTTCTTAAGTTTTGTTCATAATATTTTACAAAATTCAACCGTTGATTATTTTTTTTTTGGAGATTTTTAAAAATAGAAAAATAAAGGAATCTATTTATACAAAATAGAAATTTTTTTAGATAGTTGTGATAGATGCTGATAGAAGTCTATTAGGGTTTATCAGTAATAGAAATTATAGAAGTCTATCACTGATAGATGCTGATAGAAGTCTATCAACGTCTATCAGTGTTTTTTTTACTATTTTCTGTAAATAGTTTGATATTTTTTCTATAGGTAAAAATTTCTTTTTTTTTTTTAATTTTTTTTTAATTTATATTTATTAATGATAATTGTTTTAAAGGATAAAATTATTAGAAATATTTTTTAATATAGTAAAATGTCATTGTCTATCATTGATGTATATGTAATAAATTGATTCATTTTGGTATATTTAAAAACAAACCTGCACAAATTTAGAGTGTAATTTCATGATCGTGCATAAATTTATAATTTTCTTCTCCAATGTGTTGTTGGGTTTGGTAAGAAAAAACAAGTTTATTCTATTAAAAAATTGTGAAGTTCAGGGAAAAGTATTACGTGGCTCATCGACATTTCCAATATTACCCGACAAATTTTATTTTCTTAGTGACCTTATTTTTTTGGTTTTTTTTTTTTTTTGGTTTGATATATCCTACTTTGACGTGTTCAATCATACACACTAATATAAAAAAGATTAAAATACTTTATTGGTGTCACTTTGAAACTTATTTTACTTCATGTCGAAATTTAGTTAATATATTTTTAATAAATCTTGAAATTTGTTCTAATGTCAGTTTAACATTGGAAAACTTGTAGCTGTTCGTCCACAAATTTTGAAAACATATTTGTATTGTGTCCTTTTTTAATAACAATGAAATATCATTATTTTTTCAAGTTCGATAAAAAAAATATATTTAAACTAATAGTAAGGACTAATTTTAAGAATTAATGAAAAATATGAGACTAAATTTAAACGTTTAAAAGCACATGTCTAAAATAAAATGAGTCTTAAACTATGAAAACAAAAATGATATTTTGACCATAAAAATTTATGTATAATTGTCACAAAATAGTATGTCTTGTTTACTTATTTTTAGGAAAAAAAACCTTTTTGATTCCAGGTTTTGAATCTAGTTTATATTTGGTCTCTAAATTTCAAAATATTACATTTTTAGTCTTTAAATTTTGAGTTTGGTTTCAATTTAGTCGCTAAAGAGAAAAACACGTTGATTTTGATTAGAGCATGTTTTTTAGGGAACCAAGGTGGACAAATTGATAGTTCTTTTTAGGGATGTTTTGCATAAGTGTGTTACCTTGTTTGAGGCAAAGATTGTTGAAAGTGTGACCAAAATTCTATATATTCAAGTGAACAATAACGAAGAATTACAAAATTTTAGAAAGGTCCATTCTCCCTAACCATTGATGTTTTTAAAACAAAACTTTTCACAAGTTAAATCACAAAATTCAAATATTGAGATTTAAAAAATAAACCCACCTAAATAGAAAGTCATTGTACTTGATTTAGTAAATTTGAAAACAAGAAATTGTACTTGATCATAAGACAACAAAACATACTCTTAAATGTGTAAATGGTGTTAATGTTGTGTTGATGATGGTAGATAGAATGCTTTAAAGTATTGAATTCAAAGGTAATGCTAAAATACTAAAGACAACACATTACATTTTTGAAGTGTTGTATAATGTTATTAAGAATGATAAGTTTTCGACATGAGCAGGTGTAGAATCAACACTACCACATAAGAGTAGAGATGCATCCATTGTTCTTCCATTGATGAATAATGAACACTATCATGCCTCTACTTCCCAATCAGAGCTTGTAACCCTTTCAATGGTTCTCTCTCTCTCGTTCTCTCTCACTCTTTCTCTCTCTTCCCTTCTTCATATTGAAACTGATAATTTCTATTTTTAATAGACACCGGGTACATCATACGTATACCACGACCTGTCGTATGGAGGACTGATGTCTCCACTTGGATTTCAAACAATGGTATGAATACGATATTAAAGGCTTGTTTGATAATATTTTTGTTTTTTTGTGTATGATTCCTATTTTTAATTTTCTAATGAAAGAAAATGGTGAAACACATGGTTTAATAACATTAGGCTTAAAGATTAAGATCTTGTTTGATAACAATTTTGTGTTTGGTTTCTAGATTTTGAAAATTAAGGTTTGAGTTGATAATTATTTGGTTTTTGATATTTTAAAACTAAGTTTATAAATACTACTTTCAACTATTGATTTCTTTGTTTCACTATATACCTTTTCAAATATGTTTTCAAAAACCAAATTAAGTTTTGAAAACTAACCCTCTGTTTGGTAACCTCTACATTTTTTTGCTTTGCTATCTACATTTTACCAATGTTTTTAAAAAACCAAGTCAAGTTTTGAAAACTAAAAAAATTAGTTTTTAAAAACTTGTTTATGTTTTTTAAATTTGACTAAAAATTGAACTATTTTACTTAAGAAAATGGTAAAACACTATAAGAAGTTGAGAGGAAATAAACTTAATTTTCAAAAATAAAAAACTATTTGGTAAATAAAGTAGTTTGTTTAAAAAGGTAGTTTTTTGTATTTTAAATTTGGTTAAAAATTAAAAGATCAAAATATGAAAACTATGGTAAATAAATAGTAAGAAAATAAACACCATTTAAAAAATAAATAAAATAAACTAAATGGTTATGAAAGGGATGTGTAAGCTTGCTAAATACTGCTACTTCCATTATCTATGAATTTCTTTTTGTTCGGTTAATAATTGAGAAATGTTTTTTTAATATATATCCATTGCTAAATATTCCTTTTTTTTTTTTTTTTTTTTTAAGAAATTAGTTAAAAATTTAAATCTTTACCCGAAGAACATTGTAAAGAAATTATTAGAGAACAAAGGCAATTATCAAAATTCAAGCCATGAATAAACAAATGATTATCGATGTTTAAATTACTCACTCTACAATAATTAAGTCTTATTAATCAAAGTCCATATACTTAAATAAGTAAGGCTTCAACTTTGAGAGGCAATGGCTCATATGTAATATCCTATGTTGAGAAATTCATTCCTTTCATGCATATAAGCCACTTCGGAGTGTTTGTCTCAAGGAGATGAGTTTGAAGGAGCTCGTAACCCACAACTGAAAAATATAAAATTTATGTTTTATTAACTTCTTACATTATGGGCTCCACAACTTCACAACTTGCTCCAAAAACACATCCCATTTATTTTTTGAACTCCAAAAAAACAATTTTTCTTAGATGGATTTGATATTTTGATATTATTTTTTTTCATTTGTTTGTCTTTTTAATTTTTTGGTTTTATATGGCAATAAAAGAGGAAGTCAGAAGAAAACAACTCGATTATATACCTTTACTATGGTTTTAAAGAGCTCATTTGTTAATTACTCAGCATAATTCAGAATATAGCATAATGGCACAAGGTAGAATGGCTTTGCCTCTAGCTATGGCAGAAGAACCCGTTTATGTGAATGCCAAGCAGTACCATGGAATTCTACGTCGACGACAATCCCGAGCCAAGGCCGAAGTCGAAAATAGAATATCCAGATCACAAAGAAAGGTAACGAAACATAACCCACTATATATATATATATATATATATATATATATATATATATAATGTATAAATCTCTAACTTATTAGCTTAAGCTTTCTTCGATAACCAACATCTGTACGTATCGCAGCCCTATCTTCACGAATCGAGACATCTACACGCAATGAGAAGGGAAAGGGGCTGTGGAGGCCGTTTCGTGAGCAAGAAGAAGAAGGCAGAAGCTACAACTTCCATGGATGATGGTGATGGGGAAGGCTGCAACATCAGTTTAGGCTCTGAATCAATGTGCAATGGCAGCAGCTGCTATCAAGGTTGTTCCCAACTACATTTATCTGCATATATATGA

mRNA sequence

ATGATGAGCTCTGAAATAGATTACAGAAACCGTCCAGATTGTGACTATCAGCAAACCACAAACTACACCACCGCTAATTCTCAATCTTGGAGGTGGCACGGCGGCGTACACGGCGGGGCCACCACTATTGCGGTCATGTCAAAAGAAGAGAAAGCAAATCGGGCTTGGTCCAAGGCCTTGGTTGGCAGTGTGCCAGGGCCCAAAACAAACACCAAGGAATTGCAAATAACTCTGTCTCCACCTCGAGGTGTAGAATCAACACTACCACATAAGAGTAGAGATGCATCCATTGTTCTTCCATTGATGAATAATGAACACTATCATGCCTCTACTTCCCAATCAGAGCTTGTAACCCTTTCAATGACACCGGGTACATCATACGTATACCACGACCTGTCGTATGGAGGACTGATGTCTCCACTTGGATTTCAAACAATGCATAATTCAGAATATAGCATAATGGCACAAGGTAGAATGGCTTTGCCTCTAGCTATGGCAGAAGAACCCGTTTATGTGAATGCCAAGCAGTACCATGGAATTCTACGTCGACGACAATCCCGAGCCAAGGCCGAACCCTATCTTCACGAATCGAGACATCTACACGCAATGAGAAGGGAAAGGGGCTGTGGAGGCCGTTTCGTGAGCAAGAAGAAGAAGGCAGAAGCTACAACTTCCATGGATGATGGTGATGGGGAAGGCTGCAACATCAGTTTAGGCTCTGAATCAATGTGCAATGGCAGCAGCTGCTATCAAGGTTGTTCCCAACTACATTTATCTGCATATATATGA

Coding sequence (CDS)

ATGATGAGCTCTGAAATAGATTACAGAAACCGTCCAGATTGTGACTATCAGCAAACCACAAACTACACCACCGCTAATTCTCAATCTTGGAGGTGGCACGGCGGCGTACACGGCGGGGCCACCACTATTGCGGTCATGTCAAAAGAAGAGAAAGCAAATCGGGCTTGGTCCAAGGCCTTGGTTGGCAGTGTGCCAGGGCCCAAAACAAACACCAAGGAATTGCAAATAACTCTGTCTCCACCTCGAGGTGTAGAATCAACACTACCACATAAGAGTAGAGATGCATCCATTGTTCTTCCATTGATGAATAATGAACACTATCATGCCTCTACTTCCCAATCAGAGCTTGTAACCCTTTCAATGACACCGGGTACATCATACGTATACCACGACCTGTCGTATGGAGGACTGATGTCTCCACTTGGATTTCAAACAATGCATAATTCAGAATATAGCATAATGGCACAAGGTAGAATGGCTTTGCCTCTAGCTATGGCAGAAGAACCCGTTTATGTGAATGCCAAGCAGTACCATGGAATTCTACGTCGACGACAATCCCGAGCCAAGGCCGAACCCTATCTTCACGAATCGAGACATCTACACGCAATGAGAAGGGAAAGGGGCTGTGGAGGCCGTTTCGTGAGCAAGAAGAAGAAGGCAGAAGCTACAACTTCCATGGATGATGGTGATGGGGAAGGCTGCAACATCAGTTTAGGCTCTGAATCAATGTGCAATGGCAGCAGCTGCTATCAAGGTTGTTCCCAACTACATTTATCTGCATATATATGA

Protein sequence

MMSSEIDYRNRPDCDYQQTTNYTTANSQSWRWHGGVHGGATTIAVMSKEEKANRAWSKALVGSVPGPKTNTKELQITLSPPRGVESTLPHKSRDASIVLPLMNNEHYHASTSQSELVTLSMTPGTSYVYHDLSYGGLMSPLGFQTMHNSEYSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEPYLHESRHLHAMRRERGCGGRFVSKKKKAEATTSMDDGDGEGCNISLGSESMCNGSSCYQGCSQLHLSAYI

Homology

[Close]

BLAST of HG10017769 vs. NCBI nr
Match: XP_031739714.1 (nuclear transcription factor Y subunit A-7 isoform X2 [Cucumis sativus])

HSP 1 Score: 370.2 bits (949), Expect = 1.5e-98
Identity = 202/273 (73.99%), Postives = 215/273 (78.75%), Query Frame = 0


Query: 1   MMSSEIDYRNRPDCDYQQTTNYTTANSQSWRWHGGVHGGATTIAVMSKEEKANRAWSKAL 60
           MMSSEI+ RN PDCD QQ TNY+T NSQ  R HG VHG  +T A M KEEK N AW K L
Sbjct: 1   MMSSEIECRNHPDCDNQQITNYSTNNSQPCRLHGCVHGVNSTTAFMPKEEKRNWAWPKPL 60

Query: 61  VGSVPGPKTNTKELQITLSPPRGVESTLPHKSRDASIVLPLMNNEHYHASTSQSELVTLS 120
           V S P  KT+TKEL ITLS   GV  TLP+KSRD S VLP MNNEHYHASTSQSEL++LS
Sbjct: 61  VDSQPEHKTSTKELHITLS---GVGPTLPYKSRDVSTVLPFMNNEHYHASTSQSELLSLS 120

Query: 121 MTPGTSYVYHDLSYGGLMSPLGFQTMHNSEYSIMAQGRMALPLAMAEEPVYVNAKQYHGI 180
           MT  TSY YHD SYGGL+SP GFQTMHNS+YS     RMALPLAMAEEPVYVNAKQYHGI
Sbjct: 121 MTANTSYAYHDPSYGGLLSPFGFQTMHNSDYS-----RMALPLAMAEEPVYVNAKQYHGI 180

Query: 181 LRRRQSRAKAE-----------PYLHESRHLHAMRRERGCGGRFVSKKKKAEATTSMDDG 240
           LRRRQSRAKAE           PYLHESRHLHAMRRERGCGGRF+SK KKAEA++ +DD 
Sbjct: 181 LRRRQSRAKAEVENKISRSQRKPYLHESRHLHAMRRERGCGGRFLSKNKKAEASSLLDDD 240

Query: 241 DGEGCNISLGSESMCNGSSCYQGCSQLHLSAYI 263
           DGEG NISLGSESMCNGS CYQG SQLHLSAYI
Sbjct: 241 DGEGSNISLGSESMCNGSKCYQG-SQLHLSAYI 264

[Close]

BLAST of HG10017769 vs. NCBI nr
Match: XP_004150466.2 (nuclear transcription factor Y subunit A-7 isoform X1 [Cucumis sativus])

HSP 1 Score: 370.2 bits (949), Expect = 1.5e-98
Identity = 202/273 (73.99%), Postives = 215/273 (78.75%), Query Frame = 0


Query: 1   MMSSEIDYRNRPDCDYQQTTNYTTANSQSWRWHGGVHGGATTIAVMSKEEKANRAWSKAL 60
           MMSSEI+ RN PDCD QQ TNY+T NSQ  R HG VHG  +T A M KEEK N AW K L
Sbjct: 81  MMSSEIECRNHPDCDNQQITNYSTNNSQPCRLHGCVHGVNSTTAFMPKEEKRNWAWPKPL 140

Query: 61  VGSVPGPKTNTKELQITLSPPRGVESTLPHKSRDASIVLPLMNNEHYHASTSQSELVTLS 120
           V S P  KT+TKEL ITLS   GV  TLP+KSRD S VLP MNNEHYHASTSQSEL++LS
Sbjct: 141 VDSQPEHKTSTKELHITLS---GVGPTLPYKSRDVSTVLPFMNNEHYHASTSQSELLSLS 200

Query: 121 MTPGTSYVYHDLSYGGLMSPLGFQTMHNSEYSIMAQGRMALPLAMAEEPVYVNAKQYHGI 180
           MT  TSY YHD SYGGL+SP GFQTMHNS+YS     RMALPLAMAEEPVYVNAKQYHGI
Sbjct: 201 MTANTSYAYHDPSYGGLLSPFGFQTMHNSDYS-----RMALPLAMAEEPVYVNAKQYHGI 260

Query: 181 LRRRQSRAKAE-----------PYLHESRHLHAMRRERGCGGRFVSKKKKAEATTSMDDG 240
           LRRRQSRAKAE           PYLHESRHLHAMRRERGCGGRF+SK KKAEA++ +DD 
Sbjct: 261 LRRRQSRAKAEVENKISRSQRKPYLHESRHLHAMRRERGCGGRFLSKNKKAEASSLLDDD 320

Query: 241 DGEGCNISLGSESMCNGSSCYQGCSQLHLSAYI 263
           DGEG NISLGSESMCNGS CYQG SQLHLSAYI
Sbjct: 321 DGEGSNISLGSESMCNGSKCYQG-SQLHLSAYI 344

[Close]

BLAST of HG10017769 vs. NCBI nr
Match: XP_008460780.1 (PREDICTED: nuclear transcription factor Y subunit A-7-like [Cucumis melo])

HSP 1 Score: 368.6 bits (945), Expect = 4.4e-98
Identity = 205/274 (74.82%), Postives = 220/274 (80.29%), Query Frame = 0


Query: 1   MMSSEIDYRNRPDCDYQQTTNYTTANSQSWRWHGGVHGGATTIAVMSKEEKANRAWSKAL 60
           MMSSEI+  NRPDCD QQ TNYT  NSQ  +    +HGG +T A MSKEEK N AW K L
Sbjct: 1   MMSSEIECGNRPDCDNQQITNYTN-NSQPCK----LHGGNSTTANMSKEEKRNWAWPKGL 60

Query: 61  VGSVPGPKTNTKELQITLSPPRGVESTLPHKSRDASIVLPLMNNEHYHASTSQSELVTLS 120
           V S P P+T+ KE++ITLS   GVESTLP+KSRD S VLPLMNNEHYHASTSQ EL+TLS
Sbjct: 61  VDSEPVPRTSHKEMRITLS---GVESTLPYKSRDESTVLPLMNNEHYHASTSQPELLTLS 120

Query: 121 MTPGTSYVYHDLSYGGLMSPLGFQTMHNSEYSIMAQGRMALPLAMAEEPVYVNAKQYHGI 180
           MT  TSY YHD SYGGL SP  FQTMHNS+YS MAQ RMALPLAMAEEPVYVNAKQYHGI
Sbjct: 121 MTTDTSYTYHDPSYGGLPSPFEFQTMHNSDYSRMAQARMALPLAMAEEPVYVNAKQYHGI 180

Query: 181 LRRRQSRAKAE-----------PYLHESRHLHAMRRERGCGGRFVSKKKKAEATTSM-DD 240
           LRRRQSRAKAE           PYLHESRHLHAMRRERGCGGRF+SKKKK EA+TS+ DD
Sbjct: 181 LRRRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFLSKKKKVEASTSLDDD 240

Query: 241 GDGEGCNISLGSESMCNGSSCYQGCSQLHLSAYI 263
            DGEG NISLGSESMCNGS+CYQG SQLHLSAYI
Sbjct: 241 DDGEGSNISLGSESMCNGSNCYQG-SQLHLSAYI 265

[Close]

BLAST of HG10017769 vs. NCBI nr
Match: XP_022151660.1 (nuclear transcription factor Y subunit A-7-like isoform X1 [Momordica charantia])

HSP 1 Score: 339.7 bits (870), Expect = 2.2e-89
Identity = 197/281 (70.11%), Postives = 215/281 (76.51%), Query Frame = 0


Query: 1   MMSSEIDYRNRPDCDYQQT----TNYTTANSQSWRWHGGVHGGA--TTIAVMSKEEKANR 60
           MMSS  +YRNRP CD  QT     NYTT NSQSW WHGG HGGA  TT   MSKE+++N 
Sbjct: 8   MMSSGTEYRNRPICDNLQTRNRSPNYTTDNSQSWWWHGGGHGGATTTTTTTMSKEDESNW 67

Query: 61  AWSKALVGSVPGPKTNTKELQITLSPPRGVES-TLPHKSRDASIVLPLMNNEHYHASTSQ 120
           AW K LV S PGPKT+ K++Q T+SPP+G ES   P+KSRDASI+LPLMNNEH  ASTS 
Sbjct: 68  AWPKGLVSSGPGPKTSIKQMQTTISPPQGGESAATPNKSRDASIMLPLMNNEHL-ASTSH 127

Query: 121 SELVTLSMTPGTSYVYHDLSYGGL-MSPLGFQTMHNSEYSIMAQGRMALPLAMAEEPVYV 180
           SELVTL MT  TSY YHD   GG+ M P GFQT+ NSEYS +A GRMALPLA+AEEPVYV
Sbjct: 128 SELVTLPMT-ATSYQYHDACNGGITMPPFGFQTL-NSEYSKVAHGRMALPLAIAEEPVYV 187

Query: 181 NAKQYHGILRRRQSRAKAE-----------PYLHESRHLHAMRRERGCGGRFVSKKKKAE 240
           NAKQYHGILRRRQSRAKAE           PYLHESRHLHAMRRERGCGGRFVSKKKK E
Sbjct: 188 NAKQYHGILRRRQSRAKAEVENRINRSQKKPYLHESRHLHAMRRERGCGGRFVSKKKKVE 247

Query: 241 ATTSMDDGDGEGCNISLGSESMCNGSSCYQGCSQLHLSAYI 263
           ++ SMDD D  G NISLGSE M NGSSCY+G S LHLSAYI
Sbjct: 248 SSASMDD-DENGSNISLGSEPMSNGSSCYEG-SGLHLSAYI 283

[Close]

BLAST of HG10017769 vs. NCBI nr
Match: XP_022151661.1 (nuclear transcription factor Y subunit A-7-like isoform X2 [Momordica charantia])

HSP 1 Score: 339.7 bits (870), Expect = 2.2e-89
Identity = 197/281 (70.11%), Postives = 215/281 (76.51%), Query Frame = 0


Query: 1   MMSSEIDYRNRPDCDYQQT----TNYTTANSQSWRWHGGVHGGA--TTIAVMSKEEKANR 60
           MMSS  +YRNRP CD  QT     NYTT NSQSW WHGG HGGA  TT   MSKE+++N 
Sbjct: 1   MMSSGTEYRNRPICDNLQTRNRSPNYTTDNSQSWWWHGGGHGGATTTTTTTMSKEDESNW 60

Query: 61  AWSKALVGSVPGPKTNTKELQITLSPPRGVES-TLPHKSRDASIVLPLMNNEHYHASTSQ 120
           AW K LV S PGPKT+ K++Q T+SPP+G ES   P+KSRDASI+LPLMNNEH  ASTS 
Sbjct: 61  AWPKGLVSSGPGPKTSIKQMQTTISPPQGGESAATPNKSRDASIMLPLMNNEHL-ASTSH 120

Query: 121 SELVTLSMTPGTSYVYHDLSYGGL-MSPLGFQTMHNSEYSIMAQGRMALPLAMAEEPVYV 180
           SELVTL MT  TSY YHD   GG+ M P GFQT+ NSEYS +A GRMALPLA+AEEPVYV
Sbjct: 121 SELVTLPMT-ATSYQYHDACNGGITMPPFGFQTL-NSEYSKVAHGRMALPLAIAEEPVYV 180

Query: 181 NAKQYHGILRRRQSRAKAE-----------PYLHESRHLHAMRRERGCGGRFVSKKKKAE 240
           NAKQYHGILRRRQSRAKAE           PYLHESRHLHAMRRERGCGGRFVSKKKK E
Sbjct: 181 NAKQYHGILRRRQSRAKAEVENRINRSQKKPYLHESRHLHAMRRERGCGGRFVSKKKKVE 240

Query: 241 ATTSMDDGDGEGCNISLGSESMCNGSSCYQGCSQLHLSAYI 263
           ++ SMDD D  G NISLGSE M NGSSCY+G S LHLSAYI
Sbjct: 241 SSASMDD-DENGSNISLGSEPMSNGSSCYEG-SGLHLSAYI 276

[Close]

BLAST of HG10017769 vs. ExPASy Swiss-Prot
Match: Q9LXV5 (Nuclear transcription factor Y subunit A-1 OS=Arabidopsis thaliana OX=3702 GN=NFYA1 PE=2 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 3.5e-21
Identity = 67/129 (51.94%), Postives = 76/129 (58.91%), Query Frame = 0


Query: 129 YHDLSYGGLMSPLGFQTMHNSEYSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRA 188
           Y D  YGGLM   G Q +    Y  M + R ALPL MA+EPVYVNAKQY GILRRR++RA
Sbjct: 133 YQDPYYGGLMGAYGHQQLGFRPYLGMPRERTALPLDMAQEPVYVNAKQYEGILRRRKARA 192

Query: 189 KAE----------PYLHESRHLHAMRRERGCGGRFVSKKKKAEATTSMDDGDGEGCNISL 248
           KAE          PYLHESRH HAMRR R  GGRF    KK+E     D G   G +   
Sbjct: 193 KAELERKVIRDRKPYLHESRHKHAMRRARASGGRFA---KKSEVEAGEDAG---GRDRER 252

[Close]

BLAST of HG10017769 vs. ExPASy Swiss-Prot
Match: Q84JP1 (Nuclear transcription factor Y subunit A-7 OS=Arabidopsis thaliana OX=3702 GN=NFYA7 PE=1 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 2.2e-20
Identity = 71/173 (41.04%), Postives = 92/173 (53.18%), Query Frame = 0


Query: 91  KSRDASIVLPLMNNEHYHASTS----QSELVTLSMTPGTSYVYHDLSYGGLMS--PLGFQ 150
           + RD+    P+ +  +Y +  +         T SM PG  Y Y D  Y  + +  P  + 
Sbjct: 19  EQRDSHFQPPIPSARNYESIVTSLVYSDPGTTNSMAPG-QYPYPDPYYRSIFAPPPQPYT 78

Query: 151 TMHNSEYSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAE----------PYL 210
            +H     +  QG + LP    EEPV+VNAKQYHGILRRRQSRA+ E          PYL
Sbjct: 79  GVHLQLMGVQQQG-VPLPSDAVEEPVFVNAKQYHGILRRRQSRARLESQNKVIKSRKPYL 138

Query: 211 HESRHLHAMRRERGCGGRFVSKKKKAEATTSMDDGDGEGCNISLGSESMCNGS 248
           HESRHLHA+RR RGCGGRF++ KK+ E     D    E  N+S G  +M   S
Sbjct: 139 HESRHLHAIRRPRGCGGRFLNAKKEDE--HHEDSSHEEKSNLSAGKSAMAASS 187

[Close]

BLAST of HG10017769 vs. ExPASy Swiss-Prot
Match: Q945M9 (Nuclear transcription factor Y subunit A-9 OS=Arabidopsis thaliana OX=3702 GN=NFYA9 PE=1 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 3.8e-20
Identity = 81/234 (34.62%), Postives = 108/234 (46.15%), Query Frame = 0


Query: 10  NRPDCDYQQTTNYTTANSQSWRWHGGVHGGATTIAVMSKEEKANRAWSKALVGSVPGPKT 69
           N+ D +   T + +  +   W          +++    K  K+     ++     P  + 
Sbjct: 15  NKVDSEVHGTVSSSINSLNPWHRAAAACNANSSVEAGDKSSKSIALALESNGSKSPSNRD 74

Query: 70  NT--KELQITLSPPRGVESTLPHKSRDASIVLPLMNNEHYHASTSQ----SELVTLSMTP 129
           NT  KE Q+T SP    +S   +  +         N E  H   +Q     +LV  ++  
Sbjct: 75  NTVNKESQVTTSP----QSAGDYSDK---------NQESLHHGITQPPPHPQLVGHTVGW 134

Query: 130 GTSYVYHDLSYGGLMSPLGFQTMHNSEYSIMAQGRMALPLAMAEEPVYVNAKQYHGILRR 189
            +S  Y D  Y G+M   G   +    Y  M   RM LP  MA+EPV+VNAKQY  ILRR
Sbjct: 135 ASSNPYQDPYYAGVMGAYGHHPLGFVPYGGMPHSRMPLPPEMAQEPVFVNAKQYQAILRR 194

Query: 190 RQSRAKAE----------PYLHESRHLHAMRRERGCGGRFVSK------KKKAE 222
           RQ+RAKAE          PYLHESRH HAMRR RG GGRF  K      K+KAE
Sbjct: 195 RQARAKAELEKKLIKSRKPYLHESRHQHAMRRPRGTGGRFAKKTNTEASKRKAE 235

[Close]

BLAST of HG10017769 vs. ExPASy Swiss-Prot
Match: Q8VY64 (Nuclear transcription factor Y subunit A-4 OS=Arabidopsis thaliana OX=3702 GN=NFYA4 PE=1 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 8.8e-17
Identity = 58/116 (50.00%), Postives = 69/116 (59.48%), Query Frame = 0


Query: 154 MAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAE----------PYLHESRHLHAM 213
           M Q  + L     EEPV+VNAKQYHGILRRRQSRAK E          PY+HESRHLHA+
Sbjct: 84  MQQPGVPLQCDAVEEPVFVNAKQYHGILRRRQSRAKLEARNRAIKAKKPYMHESRHLHAI 143

Query: 214 RRERGCGGRFVSKKK-----KAEATTSMDDGDGEGCNISLGSESMCNGSSCYQGCS 255
           RR RGCGGRF++ KK     K E   + D+   E  + SL SE +   +S   G S
Sbjct: 144 RRPRGCGGRFLNAKKENGDHKEEEEATSDENTSEASS-SLRSEKLAMATSGPNGRS 198

[Close]

BLAST of HG10017769 vs. ExPASy Swiss-Prot
Match: Q93ZH2 (Nuclear transcription factor Y subunit A-3 OS=Arabidopsis thaliana OX=3702 GN=NFYA3 PE=2 SV=2)

HSP 1 Score: 88.2 bits (217), Expect = 1.5e-16
Identity = 52/106 (49.06%), Postives = 66/106 (62.26%), Query Frame = 0


Query: 126 SYVYHDLSYGGLMSP--LGFQTMHNSEYSIMAQGRMALPLAMAE-EPVYVNAKQYHGILR 185
           S+ Y D  YGGL++   L      N +   M  GR+ LP  + E +PV+VNAKQYH I+R
Sbjct: 134 SFHYADPHYGGLLAATYLPQAPTCNPQMVSMIPGRVPLPAELTETDPVFVNAKQYHAIMR 193

Query: 186 RRQSRAKAE----------PYLHESRHLHAMRRERGCGGRFVSKKK 219
           RRQ RAK E          PYLHESRH+HA++R RG GGRF++ KK
Sbjct: 194 RRQQRAKLEAQNKLIRARKPYLHESRHVHALKRPRGSGGRFLNTKK 239

[Close]

BLAST of HG10017769 vs. ExPASy TrEMBL
Match: A0A0A0KWA0 (Nuclear transcription factor Y subunit OS=Cucumis sativus OX=3659 GN=Csa_4G159320 PE=3 SV=1)

HSP 1 Score: 370.2 bits (949), Expect = 7.3e-99
Identity = 202/273 (73.99%), Postives = 215/273 (78.75%), Query Frame = 0


Query: 1   MMSSEIDYRNRPDCDYQQTTNYTTANSQSWRWHGGVHGGATTIAVMSKEEKANRAWSKAL 60
           MMSSEI+ RN PDCD QQ TNY+T NSQ  R HG VHG  +T A M KEEK N AW K L
Sbjct: 81  MMSSEIECRNHPDCDNQQITNYSTNNSQPCRLHGCVHGVNSTTAFMPKEEKRNWAWPKPL 140

Query: 61  VGSVPGPKTNTKELQITLSPPRGVESTLPHKSRDASIVLPLMNNEHYHASTSQSELVTLS 120
           V S P  KT+TKEL ITLS   GV  TLP+KSRD S VLP MNNEHYHASTSQSEL++LS
Sbjct: 141 VDSQPEHKTSTKELHITLS---GVGPTLPYKSRDVSTVLPFMNNEHYHASTSQSELLSLS 200

Query: 121 MTPGTSYVYHDLSYGGLMSPLGFQTMHNSEYSIMAQGRMALPLAMAEEPVYVNAKQYHGI 180
           MT  TSY YHD SYGGL+SP GFQTMHNS+YS     RMALPLAMAEEPVYVNAKQYHGI
Sbjct: 201 MTANTSYAYHDPSYGGLLSPFGFQTMHNSDYS-----RMALPLAMAEEPVYVNAKQYHGI 260

Query: 181 LRRRQSRAKAE-----------PYLHESRHLHAMRRERGCGGRFVSKKKKAEATTSMDDG 240
           LRRRQSRAKAE           PYLHESRHLHAMRRERGCGGRF+SK KKAEA++ +DD 
Sbjct: 261 LRRRQSRAKAEVENKISRSQRKPYLHESRHLHAMRRERGCGGRFLSKNKKAEASSLLDDD 320

Query: 241 DGEGCNISLGSESMCNGSSCYQGCSQLHLSAYI 263
           DGEG NISLGSESMCNGS CYQG SQLHLSAYI
Sbjct: 321 DGEGSNISLGSESMCNGSKCYQG-SQLHLSAYI 344

[Close]

BLAST of HG10017769 vs. ExPASy TrEMBL
Match: A0A1S3CEE5 (Nuclear transcription factor Y subunit OS=Cucumis melo OX=3656 GN=LOC103499544 PE=3 SV=1)

HSP 1 Score: 368.6 bits (945), Expect = 2.1e-98
Identity = 205/274 (74.82%), Postives = 220/274 (80.29%), Query Frame = 0


Query: 1   MMSSEIDYRNRPDCDYQQTTNYTTANSQSWRWHGGVHGGATTIAVMSKEEKANRAWSKAL 60
           MMSSEI+  NRPDCD QQ TNYT  NSQ  +    +HGG +T A MSKEEK N AW K L
Sbjct: 1   MMSSEIECGNRPDCDNQQITNYTN-NSQPCK----LHGGNSTTANMSKEEKRNWAWPKGL 60

Query: 61  VGSVPGPKTNTKELQITLSPPRGVESTLPHKSRDASIVLPLMNNEHYHASTSQSELVTLS 120
           V S P P+T+ KE++ITLS   GVESTLP+KSRD S VLPLMNNEHYHASTSQ EL+TLS
Sbjct: 61  VDSEPVPRTSHKEMRITLS---GVESTLPYKSRDESTVLPLMNNEHYHASTSQPELLTLS 120

Query: 121 MTPGTSYVYHDLSYGGLMSPLGFQTMHNSEYSIMAQGRMALPLAMAEEPVYVNAKQYHGI 180
           MT  TSY YHD SYGGL SP  FQTMHNS+YS MAQ RMALPLAMAEEPVYVNAKQYHGI
Sbjct: 121 MTTDTSYTYHDPSYGGLPSPFEFQTMHNSDYSRMAQARMALPLAMAEEPVYVNAKQYHGI 180

Query: 181 LRRRQSRAKAE-----------PYLHESRHLHAMRRERGCGGRFVSKKKKAEATTSM-DD 240
           LRRRQSRAKAE           PYLHESRHLHAMRRERGCGGRF+SKKKK EA+TS+ DD
Sbjct: 181 LRRRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFLSKKKKVEASTSLDDD 240

Query: 241 GDGEGCNISLGSESMCNGSSCYQGCSQLHLSAYI 263
            DGEG NISLGSESMCNGS+CYQG SQLHLSAYI
Sbjct: 241 DDGEGSNISLGSESMCNGSNCYQG-SQLHLSAYI 265

[Close]

BLAST of HG10017769 vs. ExPASy TrEMBL
Match: A0A6J1DFC4 (Nuclear transcription factor Y subunit OS=Momordica charantia OX=3673 GN=LOC111019574 PE=3 SV=1)

HSP 1 Score: 339.7 bits (870), Expect = 1.1e-89
Identity = 197/281 (70.11%), Postives = 215/281 (76.51%), Query Frame = 0


Query: 1   MMSSEIDYRNRPDCDYQQT----TNYTTANSQSWRWHGGVHGGA--TTIAVMSKEEKANR 60
           MMSS  +YRNRP CD  QT     NYTT NSQSW WHGG HGGA  TT   MSKE+++N 
Sbjct: 1   MMSSGTEYRNRPICDNLQTRNRSPNYTTDNSQSWWWHGGGHGGATTTTTTTMSKEDESNW 60

Query: 61  AWSKALVGSVPGPKTNTKELQITLSPPRGVES-TLPHKSRDASIVLPLMNNEHYHASTSQ 120
           AW K LV S PGPKT+ K++Q T+SPP+G ES   P+KSRDASI+LPLMNNEH  ASTS 
Sbjct: 61  AWPKGLVSSGPGPKTSIKQMQTTISPPQGGESAATPNKSRDASIMLPLMNNEHL-ASTSH 120

Query: 121 SELVTLSMTPGTSYVYHDLSYGGL-MSPLGFQTMHNSEYSIMAQGRMALPLAMAEEPVYV 180
           SELVTL MT  TSY YHD   GG+ M P GFQT+ NSEYS +A GRMALPLA+AEEPVYV
Sbjct: 121 SELVTLPMT-ATSYQYHDACNGGITMPPFGFQTL-NSEYSKVAHGRMALPLAIAEEPVYV 180

Query: 181 NAKQYHGILRRRQSRAKAE-----------PYLHESRHLHAMRRERGCGGRFVSKKKKAE 240
           NAKQYHGILRRRQSRAKAE           PYLHESRHLHAMRRERGCGGRFVSKKKK E
Sbjct: 181 NAKQYHGILRRRQSRAKAEVENRINRSQKKPYLHESRHLHAMRRERGCGGRFVSKKKKVE 240

Query: 241 ATTSMDDGDGEGCNISLGSESMCNGSSCYQGCSQLHLSAYI 263
           ++ SMDD D  G NISLGSE M NGSSCY+G S LHLSAYI
Sbjct: 241 SSASMDD-DENGSNISLGSEPMSNGSSCYEG-SGLHLSAYI 276

[Close]

BLAST of HG10017769 vs. ExPASy TrEMBL
Match: A0A6J1DBT5 (Nuclear transcription factor Y subunit OS=Momordica charantia OX=3673 GN=LOC111019574 PE=3 SV=1)

HSP 1 Score: 339.7 bits (870), Expect = 1.1e-89
Identity = 197/281 (70.11%), Postives = 215/281 (76.51%), Query Frame = 0


Query: 1   MMSSEIDYRNRPDCDYQQT----TNYTTANSQSWRWHGGVHGGA--TTIAVMSKEEKANR 60
           MMSS  +YRNRP CD  QT     NYTT NSQSW WHGG HGGA  TT   MSKE+++N 
Sbjct: 8   MMSSGTEYRNRPICDNLQTRNRSPNYTTDNSQSWWWHGGGHGGATTTTTTTMSKEDESNW 67

Query: 61  AWSKALVGSVPGPKTNTKELQITLSPPRGVES-TLPHKSRDASIVLPLMNNEHYHASTSQ 120
           AW K LV S PGPKT+ K++Q T+SPP+G ES   P+KSRDASI+LPLMNNEH  ASTS 
Sbjct: 68  AWPKGLVSSGPGPKTSIKQMQTTISPPQGGESAATPNKSRDASIMLPLMNNEHL-ASTSH 127

Query: 121 SELVTLSMTPGTSYVYHDLSYGGL-MSPLGFQTMHNSEYSIMAQGRMALPLAMAEEPVYV 180
           SELVTL MT  TSY YHD   GG+ M P GFQT+ NSEYS +A GRMALPLA+AEEPVYV
Sbjct: 128 SELVTLPMT-ATSYQYHDACNGGITMPPFGFQTL-NSEYSKVAHGRMALPLAIAEEPVYV 187

Query: 181 NAKQYHGILRRRQSRAKAE-----------PYLHESRHLHAMRRERGCGGRFVSKKKKAE 240
           NAKQYHGILRRRQSRAKAE           PYLHESRHLHAMRRERGCGGRFVSKKKK E
Sbjct: 188 NAKQYHGILRRRQSRAKAEVENRINRSQKKPYLHESRHLHAMRRERGCGGRFVSKKKKVE 247

Query: 241 ATTSMDDGDGEGCNISLGSESMCNGSSCYQGCSQLHLSAYI 263
           ++ SMDD D  G NISLGSE M NGSSCY+G S LHLSAYI
Sbjct: 248 SSASMDD-DENGSNISLGSEPMSNGSSCYEG-SGLHLSAYI 283

[Close]

BLAST of HG10017769 vs. ExPASy TrEMBL
Match: A0A6J1EKQ7 (Nuclear transcription factor Y subunit OS=Cucurbita moschata OX=3662 GN=LOC111435455 PE=3 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 1.4e-62
Identity = 156/273 (57.14%), Postives = 176/273 (64.47%), Query Frame = 0


Query: 1   MMSSEIDYRNRPDCDYQQTTNYTTANSQSWRWHGGVHGGATTIAVMSKEEKANRAWSKAL 60
           MMSS+ DYR  PD            N Q   W     G  TTIA+ SKE+K N  W   L
Sbjct: 1   MMSSKTDYRYHPD----------GYNFQPSWW----LGAPTTIAI-SKEDKVNWVWPNGL 60

Query: 61  VGSVPGPKTNTKELQITLSPPRGVESTLPHKSRDASIVLPLMNNEHYHASTSQSELVTLS 120
           V + P P  +TKE+Q T++PP   ES +  +S+DASIVLPLMNNEHYHAST +       
Sbjct: 61  VDNGPQPNRSTKEVQETMTPPPYGESIVARQSKDASIVLPLMNNEHYHASTYE------- 120

Query: 121 MTPGTSYVYHDLSYGGLMSPLGFQTMHNSEYSIMAQGRMALPLAMAEEPVYVNAKQYHGI 180
            T  TSY Y+D+ YG LM P GFQT+HNSEY+     RM LPLAMAEEPVYVNAKQYHGI
Sbjct: 121 -TTATSYQYNDVYYGQLMPPFGFQTLHNSEYT-----RMTLPLAMAEEPVYVNAKQYHGI 180

Query: 181 LRRRQSRAKAE-----------PYLHESRHLHAMRRERGCGGRFVSKKKKAEATTSMDDG 240
           LRRRQSRAKAE           PYLHESRHLHAMRRERGC GRFVSKKK  E   SM D 
Sbjct: 181 LRRRQSRAKAEVLNKISRSQKKPYLHESRHLHAMRRERGCRGRFVSKKKTVEPIASMAD- 234

Query: 241 DGEGCNISLGSESMCNGSSCYQGCSQLHLSAYI 263
           DG+G N+S         S+CYQG S+LHLSAYI
Sbjct: 241 DGKGSNMS---------SNCYQG-SELHLSAYI 234

[Close]

BLAST of HG10017769 vs. TAIR 10
Match: AT5G12840.1 (nuclear factor Y, subunit A1 )

HSP 1 Score: 103.6 bits (257), Expect = 2.5e-22
Identity = 67/129 (51.94%), Postives = 76/129 (58.91%), Query Frame = 0


Query: 129 YHDLSYGGLMSPLGFQTMHNSEYSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRA 188
           Y D  YGGLM   G Q +    Y  M + R ALPL MA+EPVYVNAKQY GILRRR++RA
Sbjct: 133 YQDPYYGGLMGAYGHQQLGFRPYLGMPRERTALPLDMAQEPVYVNAKQYEGILRRRKARA 192

Query: 189 KAE----------PYLHESRHLHAMRRERGCGGRFVSKKKKAEATTSMDDGDGEGCNISL 248
           KAE          PYLHESRH HAMRR R  GGRF    KK+E     D G   G +   
Sbjct: 193 KAELERKVIRDRKPYLHESRHKHAMRRARASGGRFA---KKSEVEAGEDAG---GRDRER 252

[Close]

BLAST of HG10017769 vs. TAIR 10
Match: AT5G12840.2 (nuclear factor Y, subunit A1 )

HSP 1 Score: 103.6 bits (257), Expect = 2.5e-22
Identity = 67/129 (51.94%), Postives = 76/129 (58.91%), Query Frame = 0


Query: 129 YHDLSYGGLMSPLGFQTMHNSEYSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRA 188
           Y D  YGGLM   G Q +    Y  M + R ALPL MA+EPVYVNAKQY GILRRR++RA
Sbjct: 132 YQDPYYGGLMGAYGHQQLGFRPYLGMPRERTALPLDMAQEPVYVNAKQYEGILRRRKARA 191

Query: 189 KAE----------PYLHESRHLHAMRRERGCGGRFVSKKKKAEATTSMDDGDGEGCNISL 248
           KAE          PYLHESRH HAMRR R  GGRF    KK+E     D G   G +   
Sbjct: 192 KAELERKVIRDRKPYLHESRHKHAMRRARASGGRFA---KKSEVEAGEDAG---GRDRER 251

[Close]

BLAST of HG10017769 vs. TAIR 10
Match: AT5G12840.4 (nuclear factor Y, subunit A1 )

HSP 1 Score: 103.6 bits (257), Expect = 2.5e-22
Identity = 67/129 (51.94%), Postives = 76/129 (58.91%), Query Frame = 0


Query: 129 YHDLSYGGLMSPLGFQTMHNSEYSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRA 188
           Y D  YGGLM   G Q +    Y  M + R ALPL MA+EPVYVNAKQY GILRRR++RA
Sbjct: 132 YQDPYYGGLMGAYGHQQLGFRPYLGMPRERTALPLDMAQEPVYVNAKQYEGILRRRKARA 191

Query: 189 KAE----------PYLHESRHLHAMRRERGCGGRFVSKKKKAEATTSMDDGDGEGCNISL 248
           KAE          PYLHESRH HAMRR R  GGRF    KK+E     D G   G +   
Sbjct: 192 KAELERKVIRDRKPYLHESRHKHAMRRARASGGRFA---KKSEVEAGEDAG---GRDRER 251

[Close]

BLAST of HG10017769 vs. TAIR 10
Match: AT5G12840.3 (nuclear factor Y, subunit A1 )

HSP 1 Score: 103.6 bits (257), Expect = 2.5e-22
Identity = 67/129 (51.94%), Postives = 76/129 (58.91%), Query Frame = 0


Query: 129 YHDLSYGGLMSPLGFQTMHNSEYSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRA 188
           Y D  YGGLM   G Q +    Y  M + R ALPL MA+EPVYVNAKQY GILRRR++RA
Sbjct: 133 YQDPYYGGLMGAYGHQQLGFRPYLGMPRERTALPLDMAQEPVYVNAKQYEGILRRRKARA 192

Query: 189 KAE----------PYLHESRHLHAMRRERGCGGRFVSKKKKAEATTSMDDGDGEGCNISL 248
           KAE          PYLHESRH HAMRR R  GGRF    KK+E     D G   G +   
Sbjct: 193 KAELERKVIRDRKPYLHESRHKHAMRRARASGGRFA---KKSEVEAGEDAG---GRDRER 252

[Close]

BLAST of HG10017769 vs. TAIR 10
Match: AT1G30500.2 (nuclear factor Y, subunit A7 )

HSP 1 Score: 100.9 bits (250), Expect = 1.6e-21
Identity = 71/173 (41.04%), Postives = 92/173 (53.18%), Query Frame = 0


Query: 91  KSRDASIVLPLMNNEHYHASTS----QSELVTLSMTPGTSYVYHDLSYGGLMS--PLGFQ 150
           + RD+    P+ +  +Y +  +         T SM PG  Y Y D  Y  + +  P  + 
Sbjct: 19  EQRDSHFQPPIPSARNYESIVTSLVYSDPGTTNSMAPG-QYPYPDPYYRSIFAPPPQPYT 78

Query: 151 TMHNSEYSIMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAE----------PYL 210
            +H     +  QG + LP    EEPV+VNAKQYHGILRRRQSRA+ E          PYL
Sbjct: 79  GVHLQLMGVQQQG-VPLPSDAVEEPVFVNAKQYHGILRRRQSRARLESQNKVIKSRKPYL 138

Query: 211 HESRHLHAMRRERGCGGRFVSKKKKAEATTSMDDGDGEGCNISLGSESMCNGS 248
           HESRHLHA+RR RGCGGRF++ KK+ E     D    E  N+S G  +M   S
Sbjct: 139 HESRHLHAIRRPRGCGGRFLNAKKEDE--HHEDSSHEEKSNLSAGKSAMAASS 187

The following BLAST results are available for this feature:

BLAST of HG10017769 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031739714.1	1.5e-98	73.99	nuclear transcription factor Y subunit A-7 isoform X2 [Cucumis sativus]	[more]
XP_004150466.2	1.5e-98	73.99	nuclear transcription factor Y subunit A-7 isoform X1 [Cucumis sativus]	[more]
XP_008460780.1	4.4e-98	74.82	PREDICTED: nuclear transcription factor Y subunit A-7-like [Cucumis melo]	[more]
XP_022151660.1	2.2e-89	70.11	nuclear transcription factor Y subunit A-7-like isoform X1 [Momordica charantia]	[more]
XP_022151661.1	2.2e-89	70.11	nuclear transcription factor Y subunit A-7-like isoform X2 [Momordica charantia]	[more]

BLAST of HG10017769 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LXV5	3.5e-21	51.94	Nuclear transcription factor Y subunit A-1 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q84JP1	2.2e-20	41.04	Nuclear transcription factor Y subunit A-7 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q945M9	3.8e-20	34.62	Nuclear transcription factor Y subunit A-9 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q8VY64	8.8e-17	50.00	Nuclear transcription factor Y subunit A-4 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q93ZH2	1.5e-16	49.06	Nuclear transcription factor Y subunit A-3 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]

BLAST of HG10017769 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KWA0	7.3e-99	73.99	Nuclear transcription factor Y subunit OS=Cucumis sativus OX=3659 GN=Csa_4G15932...	[more]
A0A1S3CEE5	2.1e-98	74.82	Nuclear transcription factor Y subunit OS=Cucumis melo OX=3656 GN=LOC103499544 P...	[more]
A0A6J1DFC4	1.1e-89	70.11	Nuclear transcription factor Y subunit OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A6J1DBT5	1.1e-89	70.11	Nuclear transcription factor Y subunit OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A6J1EKQ7	1.4e-62	57.14	Nuclear transcription factor Y subunit OS=Cucurbita moschata OX=3662 GN=LOC11143...	[more]

BLAST of HG10017769 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G12840.1	2.5e-22	51.94	nuclear factor Y, subunit A1	[more]
AT5G12840.2	2.5e-22	51.94	nuclear factor Y, subunit A1	[more]
AT5G12840.4	2.5e-22	51.94	nuclear factor Y, subunit A1	[more]
AT5G12840.3	2.5e-22	51.94	nuclear factor Y, subunit A1	[more]
AT1G30500.2	1.6e-21	41.04	nuclear factor Y, subunit A7	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001289	Nuclear transcription factor Y subunit A	SMART	SM00521	cbf3	coord: 165..216 e-value: 1.4E-26 score: 104.3
IPR001289	Nuclear transcription factor Y subunit A	PFAM	PF02045	CBFB_NFYA	coord: 168..213 e-value: 4.1E-18 score: 65.7
IPR001289	Nuclear transcription factor Y subunit A	PANTHER	PTHR12632	TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED	coord: 75..229
IPR001289	Nuclear transcription factor Y subunit A	PROSITE	PS51152	NFYA_HAP2_2	coord: 166..216 score: 26.453295
None	No IPR available	GENE3D	6.10.250.2430		coord: 166..217 e-value: 1.1E-21 score: 78.9
None	No IPR available	PANTHER	PTHR12632:SF43	NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT A-1	coord: 75..229
IPR018362	CCAAT-binding factor, conserved site	PROSITE	PS00686	NFYA_HAP2_1	coord: 171..191

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10017769.1	HG10017769.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0016602	CCAAT-binding factor complex
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity