HG10017746 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10017746
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
LocationChr03: 20994226 .. 20995492 (+)
RNA-Seq ExpressionHG10017746
SyntenyHG10017746
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCATATTTCCCTTCCACTCTCGAACGCACCGTTGCTTCTGCTCTGCTTCTCCTCTCCACTCCGCCGCCTACTCCGCCCTCTCCTCCGTTTACGTATGATATTCAATCCTATTCCCATTCCTCTTTCTTTCTCATTTCCTCTGTTCTGTTATATCATTCAAACTCATCGTCCTTTTTTTTTGTTTTGCTTTCGATCTCTGTTTCTGTGTTTTGTTGGCTGTGCAGACCGATTTCTCAAGACGAATGGCTGTTTGAGGAGAACATTATTGGAGGAAAATGCTCCAGAGAGATATCGGCGTTTTTTGATTATTCGAACTCTTGCTCTTCGATACTCACTGGATCAGATGAATCATCCGAGACTCGAGCGAAGGAACCGTTGTTGCTCTCTATTTCGCCTCATCGTGATGAGCTAAAGCTTAATGTAATGGTTCTCATTCTTATCTGTTTTACTTAATTTCTGTTCTTTTATTTTGTTCTTCTTGTATGTTGTTTGTTTTTTTTATTAGGTATTTTAGGCTCTGTTTTTGTTTGCGCATTTTCTGCTGTGTGTGATCGATACTGTGCCTTGGTTTGAGTAAAGGAACTATTCATTTGGTTCGGTGTTTAGGATTTTTTTTTTTTTTTTTGAATTAGTTTCTGGATGACTTGAATTTAATCGTATTCTGTTCCTGAGACTGGTAGCCGAATTTAGTTTGTGTTCAATAATGCTTGGCTGATTATTTCCTTTTATTACCGATGTTTGGCTATCGGATCCTTCTTGTTGTCTTGTTTCTTCTTCGGTATCAACTTCAATCTGATCAGAATCTTGAAAACTCTACTTCCTCCTCCTGATTACTTATCCGTCTGTCACTGAATTTCAATTATATGGATTTCAAGTCTCAGTACTTCGATCGATGAAGCGTTTAGTTGCTAATTAGTAAATACTTTGTTGATTTTAAGTGTAAAACACTTTTAAGTCTAAGGAATTCCTCACAGGTCGTGAGAAAGAGTCGTTCGAAGATAATACGGATTTCCGAGAAGCAGAATTTCAGTTATACAGACGACGTTACCTTGTCTTCAGGCTCCGTGTCCTCGGAGACGACTTCTTGTTTATCAAGCAGCTCAAGCGTGGTCACAAGCGCGCCGATCCATCACGTAGTTACGAGAGCAAAGAAGAAGTTGGAAATGATTCGTCACGCGTGGAGGAAAGAGCAGGTGGCATCGGCTCATATGCGGCGGCGTGCGGAAGCCATTCTGAGTTACCTCTCCGGTGGTTGTTCCTCTGA

mRNA sequence

ATGGCATATTTCCCTTCCACTCTCGAACGCACCGTTGCTTCTGCTCTGCTTCTCCTCTCCACTCCGCCGCCTACTCCGCCCTCTCCTCCGTTTACACCGATTTCTCAAGACGAATGGCTGTTTGAGGAGAACATTATTGGAGGAAAATGCTCCAGAGAGATATCGGCGTTTTTTGATTATTCGAACTCTTGCTCTTCGATACTCACTGGATCAGATGAATCATCCGAGACTCGAGCGAAGGAACCGTTGTTGCTCTCTATTTCGCCTCATCGTGATGAGCTAAAGCTTAATTCTAAGGAATTCCTCACAGGTCGTGAGAAAGAGTCGTTCGAAGATAATACGGATTTCCGAGAAGCAGAATTTCAGTTATACAGACGACGTTACCTTGTCTTCAGGCTCCGTGTCCTCGGAGACGACTTCTTGTTTATCAAGCAGCTCAAGCGTGGTCACAAGCGCGCCGATCCATCACGTAGTTACGAGAGCAAAGAAGAAGTTGGAAATGATTCGTCACGCGTGGAGGAAAGAGCAGGTGGCATCGGCTCATATGCGGCGGCGTGCGGAAGCCATTCTGAGTTACCTCTCCGGTGGTTGTTCCTCTGA

Coding sequence (CDS)

ATGGCATATTTCCCTTCCACTCTCGAACGCACCGTTGCTTCTGCTCTGCTTCTCCTCTCCACTCCGCCGCCTACTCCGCCCTCTCCTCCGTTTACACCGATTTCTCAAGACGAATGGCTGTTTGAGGAGAACATTATTGGAGGAAAATGCTCCAGAGAGATATCGGCGTTTTTTGATTATTCGAACTCTTGCTCTTCGATACTCACTGGATCAGATGAATCATCCGAGACTCGAGCGAAGGAACCGTTGTTGCTCTCTATTTCGCCTCATCGTGATGAGCTAAAGCTTAATTCTAAGGAATTCCTCACAGGTCGTGAGAAAGAGTCGTTCGAAGATAATACGGATTTCCGAGAAGCAGAATTTCAGTTATACAGACGACGTTACCTTGTCTTCAGGCTCCGTGTCCTCGGAGACGACTTCTTGTTTATCAAGCAGCTCAAGCGTGGTCACAAGCGCGCCGATCCATCACGTAGTTACGAGAGCAAAGAAGAAGTTGGAAATGATTCGTCACGCGTGGAGGAAAGAGCAGGTGGCATCGGCTCATATGCGGCGGCGTGCGGAAGCCATTCTGAGTTACCTCTCCGGTGGTTGTTCCTCTGA

Protein sequence

MAYFPSTLERTVASALLLLSTPPPTPPSPPFTPISQDEWLFEENIIGGKCSREISAFFDYSNSCSSILTGSDESSETRAKEPLLLSISPHRDELKLNSKEFLTGREKESFEDNTDFREAEFQLYRRRYLVFRLRVLGDDFLFIKQLKRGHKRADPSRSYESKEEVGNDSSRVEERAGGIGSYAAACGSHSELPLRWLFL
Homology
[Close]
BLAST of HG10017746 vs. NCBI nr
Match: XP_038882356.1 (uncharacterized protein LOC120073620 [Benincasa hispida])

HSP 1 Score: 138.3 bits (347), Expect = 7.4e-29
Identity = 77/100 (77.00%), Postives = 80/100 (80.00%), Query Frame = 0 

Query: 1   MAYFPSTLERTVASALLLLST----PPPTPPSPPFTPISQDEWLFEENIIGGKCSREISA 60
           MA FPS LERTVASALLLLST    PPP PPSPP TP SQD+WLFE N+IGGKCS EIS 
Sbjct: 1   MAQFPSPLERTVASALLLLSTPPPLPPPPPPSPPPTPNSQDKWLFENNVIGGKCSTEISP 60

Query: 61  FFDYSNSCSSILTGSDESSETRAKEPLLLSISPHRDELKL 97
           F DYSNS SSILT S+ESSETRAKEPLL S  P  DELKL
Sbjct: 61  FCDYSNSSSSILTVSNESSETRAKEPLLFSTPPCLDELKL 100

[Close]
BLAST of HG10017746 vs. NCBI nr
Match: XP_023544086.1 (uncharacterized protein LOC111803781 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 134.0 bits (336), Expect = 1.4e-27
Identity = 74/100 (74.00%), Postives = 79/100 (79.00%), Query Frame = 0 

Query: 1   MAYFPSTLERTVASALLLLSTPPPTPPSP---PFTPISQDEWLFEENIIGGKCSREISAF 60
           MA FP  LERTVASALLLLST PP PPSP   P  PISQDEWLFEE I+GGKCS E+S F
Sbjct: 1   MAEFPCALERTVASALLLLSTSPPPPPSPPPSPSLPISQDEWLFEEKILGGKCSSEMSPF 60

Query: 61  FDYSNSCSSILTGSDESSETRAKEPLLLSISPHRDELKLN 98
            D S SCSS+LT SDESSETRA+E LL S S +RDELKLN
Sbjct: 61  CDDSKSCSSVLTRSDESSETRAQELLLFSTSAYRDELKLN 100

[Close]
BLAST of HG10017746 vs. NCBI nr
Match: KAG6603217.1 (hypothetical protein SDJN03_03826, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 134.0 bits (336), Expect = 1.4e-27
Identity = 74/100 (74.00%), Postives = 79/100 (79.00%), Query Frame = 0 

Query: 1   MAYFPSTLERTVASALLLLSTPPPTPPSP---PFTPISQDEWLFEENIIGGKCSREISAF 60
           MA FP  LERTVASALLLLST PP PPSP   P  PISQDEWLFEE I+GGKCS E+S F
Sbjct: 1   MAEFPCALERTVASALLLLSTSPPPPPSPQPSPSIPISQDEWLFEEKILGGKCSSEMSPF 60

Query: 61  FDYSNSCSSILTGSDESSETRAKEPLLLSISPHRDELKLN 98
            D S SCSS+LT SDESSETRA+E LL S S +RDELKLN
Sbjct: 61  CDDSKSCSSVLTRSDESSETRAQELLLFSTSAYRDELKLN 100

[Close]
BLAST of HG10017746 vs. NCBI nr
Match: XP_022928741.1 (uncharacterized protein LOC111435559 [Cucurbita moschata])

HSP 1 Score: 134.0 bits (336), Expect = 1.4e-27
Identity = 74/100 (74.00%), Postives = 79/100 (79.00%), Query Frame = 0 

Query: 1   MAYFPSTLERTVASALLLLSTPPPTPPSP---PFTPISQDEWLFEENIIGGKCSREISAF 60
           MA FP  LERTVASALLLLST PP PPSP   P  PISQDEWLFEE I+GGKCS E+S F
Sbjct: 1   MAEFPCALERTVASALLLLSTSPPPPPSPQPSPSIPISQDEWLFEEKILGGKCSSEMSPF 60

Query: 61  FDYSNSCSSILTGSDESSETRAKEPLLLSISPHRDELKLN 98
            D S SCSS+LT SDESSETRA+E LL S S +RDELKLN
Sbjct: 61  CDDSKSCSSVLTRSDESSETRAQELLLFSTSAYRDELKLN 100

[Close]
BLAST of HG10017746 vs. NCBI nr
Match: KAG7033525.1 (hypothetical protein SDJN02_03247, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 132.9 bits (333), Expect = 3.1e-27
Identity = 73/100 (73.00%), Postives = 79/100 (79.00%), Query Frame = 0 

Query: 1   MAYFPSTLERTVASALLLLST---PPPTPPSPPFTPISQDEWLFEENIIGGKCSREISAF 60
           MA FP  LERTVASALLLLST   PPP+PP  P  PISQDEWLFEE I+GGKCS E+S F
Sbjct: 1   MAEFPCALERTVASALLLLSTSLPPPPSPPPSPSIPISQDEWLFEEKILGGKCSSEMSPF 60

Query: 61  FDYSNSCSSILTGSDESSETRAKEPLLLSISPHRDELKLN 98
            D S SCSS+LT SDESSETRA+E LL S S +RDELKLN
Sbjct: 61  CDDSKSCSSVLTRSDESSETRAQELLLFSTSAYRDELKLN 100

[Close]
BLAST of HG10017746 vs. ExPASy TrEMBL
Match: A0A6J1EL58 (uncharacterized protein LOC111435559 OS=Cucurbita moschata OX=3662 GN=LOC111435559 PE=4 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 6.7e-28
Identity = 74/100 (74.00%), Postives = 79/100 (79.00%), Query Frame = 0 

Query: 1   MAYFPSTLERTVASALLLLSTPPPTPPSP---PFTPISQDEWLFEENIIGGKCSREISAF 60
           MA FP  LERTVASALLLLST PP PPSP   P  PISQDEWLFEE I+GGKCS E+S F
Sbjct: 1   MAEFPCALERTVASALLLLSTSPPPPPSPQPSPSIPISQDEWLFEEKILGGKCSSEMSPF 60

Query: 61  FDYSNSCSSILTGSDESSETRAKEPLLLSISPHRDELKLN 98
            D S SCSS+LT SDESSETRA+E LL S S +RDELKLN
Sbjct: 61  CDDSKSCSSVLTRSDESSETRAQELLLFSTSAYRDELKLN 100

[Close]
BLAST of HG10017746 vs. ExPASy TrEMBL
Match: A0A6J1HWL4 (uncharacterized protein LOC111467304 OS=Cucurbita maxima OX=3661 GN=LOC111467304 PE=4 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 5.7e-27
Identity = 73/100 (73.00%), Postives = 78/100 (78.00%), Query Frame = 0 

Query: 1   MAYFPSTLERTVASALLLLSTPPPTPPSP---PFTPISQDEWLFEENIIGGKCSREISAF 60
           MA FP  LERTVASALLLLST PP P SP   P  PISQDEWLFEE I+GGKCS E+S F
Sbjct: 1   MAEFPCALERTVASALLLLSTSPPPPSSPPPSPSIPISQDEWLFEEKILGGKCSSEMSPF 60

Query: 61  FDYSNSCSSILTGSDESSETRAKEPLLLSISPHRDELKLN 98
            D S SCSS+LT SDESSETRA+E LL S S +RDELKLN
Sbjct: 61  CDDSKSCSSVLTRSDESSETRAQELLLFSTSAYRDELKLN 100

[Close]
BLAST of HG10017746 vs. ExPASy TrEMBL
Match: A0A6J1EE02 (uncharacterized protein LOC111432371 OS=Cucurbita moschata OX=3662 GN=LOC111432371 PE=4 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 4.1e-25
Identity = 66/97 (68.04%), Postives = 77/97 (79.38%), Query Frame = 0 

Query: 1  MAYFPSTLERTVASALLLLSTPPPTPPSPPFTPISQDEWLFEENIIGGKCSREISAFFDY 60
          MA FP +LERTVASALLLLST PP PPSPP + + QDEWL EE+ IGG   REI+  +DY
Sbjct: 1  MAEFPCSLERTVASALLLLSTSPPPPPSPPVS-VCQDEWLSEEDTIGGSFLREITVLYDY 60

Query: 61 SNSCSSILTGSDESSETRAKEPLLLSISPHRDELKLN 98
          S SCSS+LT SDESSETRA+EPLL S   +RD+LKL+
Sbjct: 61 SKSCSSVLTRSDESSETRAEEPLLFSTQAYRDDLKLH 96

[Close]
BLAST of HG10017746 vs. ExPASy TrEMBL
Match: A0A6J1DFG0 (uncharacterized protein LOC111020004 OS=Momordica charantia OX=3673 GN=LOC111020004 PE=4 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 2.9e-23
Identity = 69/98 (70.41%), Postives = 77/98 (78.57%), Query Frame = 0 

Query: 1  MAYFPSTLERTVASALLLLST-PPPTPPSPPFTPISQDEWLFEENIIGGKCSREISAFFD 60
          MA FP +LER+VASALLLLST PPP PPSPP   +S+DEWLFE   I GK SRE+ AF D
Sbjct: 1  MAEFPCSLERSVASALLLLSTSPPPPPPSPPSRSVSRDEWLFEVK-IEGKLSRELPAFCD 60

Query: 61 YSNSCSSILTGSDESSETRAKEPLLLSISPHRDELKLN 98
          YS SCSSILTG DESS+TR +EPLL S S + DELKLN
Sbjct: 61 YSKSCSSILTG-DESSKTREQEPLLFSTSAYGDELKLN 96

[Close]
BLAST of HG10017746 vs. ExPASy TrEMBL
Match: A0A6J1HSD4 (uncharacterized protein LOC111466163 OS=Cucurbita maxima OX=3661 GN=LOC111466163 PE=4 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 3.8e-23
Identity = 63/97 (64.95%), Postives = 73/97 (75.26%), Query Frame = 0 

Query: 1  MAYFPSTLERTVASALLLLSTPPPTPPSPPFTPISQDEWLFEENIIGGKCSREISAFFDY 60
          MA FP +LERTVASALLLLST PP PPS P   + QDEWL EE+ IGG   REI+  +DY
Sbjct: 1  MAEFPCSLERTVASALLLLSTSPPPPPS-PLVSVCQDEWLSEEDTIGGSFLREITVLYDY 60

Query: 61 SNSCSSILTGSDESSETRAKEPLLLSISPHRDELKLN 98
          S SCSS+ T SDESSETR +EPLL S   +RD+LKL+
Sbjct: 61 SKSCSSVFTRSDESSETRVEEPLLFSTPAYRDDLKLH 96

The following BLAST results are available for this feature:
BLAST of HG10017746 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038882356.17.4e-2977.00uncharacterized protein LOC120073620 [Benincasa hispida][more]
XP_023544086.11.4e-2774.00uncharacterized protein LOC111803781 [Cucurbita pepo subsp. pepo][more]
KAG6603217.11.4e-2774.00hypothetical protein SDJN03_03826, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022928741.11.4e-2774.00uncharacterized protein LOC111435559 [Cucurbita moschata][more]
KAG7033525.13.1e-2773.00hypothetical protein SDJN02_03247, partial [Cucurbita argyrosperma subsp. argyro... [more]
BLAST of HG10017746 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of HG10017746 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1EL586.7e-2874.00uncharacterized protein LOC111435559 OS=Cucurbita moschata OX=3662 GN=LOC1114355... [more]
A0A6J1HWL45.7e-2773.00uncharacterized protein LOC111467304 OS=Cucurbita maxima OX=3661 GN=LOC111467304... [more]
A0A6J1EE024.1e-2568.04uncharacterized protein LOC111432371 OS=Cucurbita moschata OX=3662 GN=LOC1114323... [more]
A0A6J1DFG02.9e-2370.41uncharacterized protein LOC111020004 OS=Momordica charantia OX=3673 GN=LOC111020... [more]
A0A6J1HSD43.8e-2364.95uncharacterized protein LOC111466163 OS=Cucurbita maxima OX=3661 GN=LOC111466163... [more]
BLAST of HG10017746 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 153..172
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 153..171

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10017746.1HG10017746.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0072593 reactive oxygen species metabolic process
biological_process GO:0031326 regulation of cellular biosynthetic process
cellular_component GO:0005737 cytoplasm
molecular_function GO:0016667 oxidoreductase activity, acting on a sulfur group of donors