HG10017725 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10017725
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Unknown protein
Location	Chr03: 20239639 .. 20239842 (-)
RNA-Seq Expression	HG10017725
Synteny	HG10017725

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAAAAATCCCTTTGCCACTTAAGCCCCCTAGATCAAAGGCTCCTACCGTTTACCAAGATGAAAACTGAGAAGACTGCTCCCAAGAAGGCCTCGAAACTCAAAACAATCCCCTCCATCTCTGTTGCTGATGCTATTGCTTCTCCTACTGCATCTGCTCCTGACCCCACTACTCAACCCAAACTTGTAACCACTCAAGCTTAA

mRNA sequence

ATGCAAAAATCCCTTTGCCACTTAAGCCCCCTAGATCAAAGGCTCCTACCGTTTACCAAGATGAAAACTGAGAAGACTGCTCCCAAGAAGGCCTCGAAACTCAAAACAATCCCCTCCATCTCTGTTGCTGATGCTATTGCTTCTCCTACTGCATCTGCTCCTGACCCCACTACTCAACCCAAACTTGTAACCACTCAAGCTTAA

Coding sequence (CDS)

ATGCAAAAATCCCTTTGCCACTTAAGCCCCCTAGATCAAAGGCTCCTACCGTTTACCAAGATGAAAACTGAGAAGACTGCTCCCAAGAAGGCCTCGAAACTCAAAACAATCCCCTCCATCTCTGTTGCTGATGCTATTGCTTCTCCTACTGCATCTGCTCCTGACCCCACTACTCAACCCAAACTTGTAACCACTCAAGCTTAA

Protein sequence

MQKSLCHLSPLDQRLLPFTKMKTEKTAPKKASKLKTIPSISVADAIASPTASAPDPTTQPKLVTTQA

Homology

The following BLAST results are available for this feature:

BLAST of HG10017725 vs.


Match Name	E-value	Identity	Description

BLAST of HG10017725 vs.


Match Name	E-value	Identity	Description

BLAST of HG10017725 vs.


Match Name	E-value	Identity	Description

BLAST of HG10017725 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 48..67

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10017725.1	HG10017725.1	mRNA