HG10017714 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10017714
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionProline-rich protein HaeIII subfamily 1-like
LocationChr03: 19681845 .. 19682342 (-)
RNA-Seq ExpressionHG10017714
SyntenyHG10017714
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCATATGCATTTCTCACTAGGGAAACGCAAGAGAGTACCTGACTTAGCTCCACCTTTCAGCTTGGGAATACTATCCAATAAAGAACGCACTTCCCCGTCTGGACCGAGTCAAAGAACATCAGACAATACACCTCCCTACCGCATGCCTCATCCATCGTTTTACAAAAGCAATCTGGGATCAGCTTATGGAATATTACCAAAAGGCATGCGCATTCCTCCGTCTGGGCCGAGTCAAAGGAGTTCTGAGAGTCCACCTCCCCCACCACATGTCCCATCCGTCGTTTTACACGAGGAATCTGGGATCAACTTCAGAGTATTACCAAAAGAAGTGCGTATTCCTCCGTCTGGGCCGAGCAAAAGATTCTCGGACTATCCACCTCCTCCACCGCATGCTCCTTCCGTTGTTTTACATGAAGAATCTAAGATTCATTTTGTGAGGTATCGTAGAAATGCACCTATTCCACCATCTGCTCCAAGCGGACGGGTACCATTATGA

mRNA sequence

ATGCATATGCATTTCTCACTAGGGAAACGCAAGAGAGTACCTGACTTAGCTCCACCTTTCAGCTTGGGAATACTATCCAATAAAGAACGCACTTCCCCGTCTGGACCGAGTCAAAGAACATCAGACAATACACCTCCCTACCGCATGCCTCATCCATCGTTTTACAAAAGCAATCTGGGATCAGCTTATGGAATATTACCAAAAGGCATGCGCATTCCTCCGTCTGGGCCGAGTCAAAGGAGTTCTGAGAGTCCACCTCCCCCACCACATGTCCCATCCGTCGTTTTACACGAGGAATCTGGGATCAACTTCAGAGTATTACCAAAAGAAGTGCGTATTCCTCCGTCTGGGCCGAGCAAAAGATTCTCGGACTATCCACCTCCTCCACCGCATGCTCCTTCCGTTGTTTTACATGAAGAATCTAAGATTCATTTTGTGAGGTATCGTAGAAATGCACCTATTCCACCATCTGCTCCAAGCGGACGGGTACCATTATGA

Coding sequence (CDS)

ATGCATATGCATTTCTCACTAGGGAAACGCAAGAGAGTACCTGACTTAGCTCCACCTTTCAGCTTGGGAATACTATCCAATAAAGAACGCACTTCCCCGTCTGGACCGAGTCAAAGAACATCAGACAATACACCTCCCTACCGCATGCCTCATCCATCGTTTTACAAAAGCAATCTGGGATCAGCTTATGGAATATTACCAAAAGGCATGCGCATTCCTCCGTCTGGGCCGAGTCAAAGGAGTTCTGAGAGTCCACCTCCCCCACCACATGTCCCATCCGTCGTTTTACACGAGGAATCTGGGATCAACTTCAGAGTATTACCAAAAGAAGTGCGTATTCCTCCGTCTGGGCCGAGCAAAAGATTCTCGGACTATCCACCTCCTCCACCGCATGCTCCTTCCGTTGTTTTACATGAAGAATCTAAGATTCATTTTGTGAGGTATCGTAGAAATGCACCTATTCCACCATCTGCTCCAAGCGGACGGGTACCATTATGA

Protein sequence

MHMHFSLGKRKRVPDLAPPFSLGILSNKERTSPSGPSQRTSDNTPPYRMPHPSFYKSNLGSAYGILPKGMRIPPSGPSQRSSESPPPPPHVPSVVLHEESGINFRVLPKEVRIPPSGPSKRFSDYPPPPPHAPSVVLHEESKIHFVRYRRNAPIPPSAPSGRVPL
Homology
BLAST of HG10017714 vs. NCBI nr
Match: XP_038882352.1 (uncharacterized protein LOC120073615 [Benincasa hispida])

HSP 1 Score: 172.9 bits (437), Expect = 2.2e-39
Identity = 87/135 (64.44%), Postives = 101/135 (74.81%), Query Frame = 0

Query: 2   HMHFSLGKRKRVPDLAPPFSLGILSNKERTSPSGPSQRTSDNTPPYRMPHPSFYKSNLGS 61
           H+HFSLGK KR+PDLAPPF+LGILS +ER  PSG SQ TSDN PP               
Sbjct: 58  HIHFSLGKYKRIPDLAPPFNLGILSKEERVPPSGLSQSTSDNPPPPPHVISIILHKESRI 117

Query: 62  AYGILPKGMRIPPSGPSQRSSESPPPPPHVPSVVLHEESGINFRVLPKEVRIPPSGPSKR 121
            + +L KG RIPPSGPSQR+SESPPPPPH  SV+LH++ GINF +LPK + IPPSGPSKR
Sbjct: 118 NFRVLSKGNRIPPSGPSQRTSESPPPPPHALSVILHKKPGINFGILPKSMHIPPSGPSKR 177

Query: 122 FSDYPPPPPHAPSVV 137
           FS+YP PP HAPSV+
Sbjct: 178 FSNYPSPPTHAPSVI 192

BLAST of HG10017714 vs. NCBI nr
Match: KAG6603169.1 (hypothetical protein SDJN03_03778, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 146.4 bits (368), Expect = 2.2e-31
Identity = 80/146 (54.79%), Postives = 98/146 (67.12%), Query Frame = 0

Query: 18  PPFSLGILSNKERTSPSGPSQRTSDNTPPYRMPHPSFYKSNLGSAYGILPKGMRIPPSGP 77
           PP  L +L      SPSGPSQRTSD  PP                +G+LPKG+ IPPSGP
Sbjct: 77  PPVVLRMLPKGVPISPSGPSQRTSDYPPPPPRASSVILSKQSKINFGMLPKGVPIPPSGP 136

Query: 78  SQRSSESPPPPPHVPSVVLHEESGINFRVLPKEVRIPPSGPSKRFSDYPPPPP-HAPSVV 137
           SQR+S+ PPPPP   SV+L+++S INF +LPK V IPPSGPS+R S+YPPPPP HA SV+
Sbjct: 137 SQRTSDYPPPPPRASSVILNKQSKINFGMLPKGVPIPPSGPSQRTSNYPPPPPLHASSVI 196

Query: 138 LHEESKIHFVRYRRNAPIPPSAPSGR 163
           L+ +SKI+F    +  PIPPS PS R
Sbjct: 197 LNTQSKINFGMLPKGVPIPPSGPSQR 222

BLAST of HG10017714 vs. NCBI nr
Match: XP_031744042.1 (proline-rich receptor-like protein kinase PERK9 [Cucumis sativus])

HSP 1 Score: 139.0 bits (349), Expect = 3.6e-29
Identity = 84/161 (52.17%), Postives = 104/161 (64.60%), Query Frame = 0

Query: 2   HMHFSLGKRKRVPDLAPPFSLGILSNKERTSPSGPSQRTSDNTPPYRMPHPSFYKSNLGS 61
           H+ FS  K KR+PD       GILS   R  PSGPSQR+SD+TPP   P    +K ++ +
Sbjct: 47  HIRFSRTKSKRIPDFDTHSGFGILSKAIRIPPSGPSQRSSDSTPP---PSIVLHKESMMN 106

Query: 62  AYGILPKGMRIPPSGPSQRSSESPPPPPHVPSVVLHEESGINFRVLPKEVRIPPSGPSKR 121
            +GILPKG+    SGPSQR S+SPP PP  PS+VLH+ES I F +LPK V    SGPS+R
Sbjct: 107 -FGILPKGVPTHSSGPSQRFSDSPPSPP--PSIVLHKESRIKFGILPKGVPTHSSGPSRR 166

Query: 122 FSDYPPPPPHAPSVVLHEESKIHFVRYRRNAPIPPSAPSGR 163
           FSD PPPPP  PS+VLH+ES+I+F    +      S PS R
Sbjct: 167 FSDSPPPPP--PSIVLHKESRINFGILSKGVRTHSSGPSRR 199

BLAST of HG10017714 vs. NCBI nr
Match: KAA0040932.1 (proline-rich protein HaeIII subfamily 1-like [Cucumis melo var. makuwa] >TYK10605.1 proline-rich protein HaeIII subfamily 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 136.3 bits (342), Expect = 2.3e-28
Identity = 78/136 (57.35%), Postives = 98/136 (72.06%), Query Frame = 0

Query: 4   HFSLGKRKRVPDLAPPFSLGILSNKERTSPSGPSQRTSDNTPPYRMPHPSFYKSNLGSAY 63
           HFS  K K++PDLAPPFSLGILS   RT PSG SQ TS+N P   +     +K ++ + +
Sbjct: 59  HFSWPKPKKIPDLAPPFSLGILSKGIRTPPSGLSQGTSNNPPSPHVAPIILHKESMVN-F 118

Query: 64  GILPKGMRIPPSGPSQRSSESPPPPPHVPSVVLHEESGINFRVLPKEVRIPPSGPSKRFS 123
           GILPKG+RIPPSGPS+R+S+ PPP  +  S+   +ES I + +LPK VRIPPSGPSKR S
Sbjct: 119 GILPKGVRIPPSGPSRRTSDPPPPLSNFHSI---KESRIKYGILPKGVRIPPSGPSKRNS 178

Query: 124 DYPPPPP---HAPSVV 137
           DY PPPP   HAPS++
Sbjct: 179 DYYPPPPMHLHAPSII 190

BLAST of HG10017714 vs. NCBI nr
Match: XP_022967687.1 (actin cytoskeleton-regulatory complex protein PAN1-like [Cucurbita maxima])

HSP 1 Score: 136.3 bits (342), Expect = 2.3e-28
Identity = 74/146 (50.68%), Postives = 93/146 (63.70%), Query Frame = 0

Query: 17  APPFSLGILSNKERTSPSGPSQRTSDNTPPYRMPHPSFYKSNLGSAYGILPKGMRIPPSG 76
           +P    G+L       PS PSQRTSD  PP           +     G+LP+G+ IPPSG
Sbjct: 236 SPSLVFGMLPKGVPIPPSRPSQRTSDYPPPPPRASSIILNKHSKINLGMLPRGVPIPPSG 295

Query: 77  PSQRSSESPPPPPHVPSVVLHEESGINFRVLPKEVRIPPSGPSKRFSDYPPPPPHAPSVV 136
           PSQR+S+ PPPPPH  SV+L+++S INF +LPK V IPPSGPS+R S YPPPPP A SV+
Sbjct: 296 PSQRTSDYPPPPPHASSVILNKQSKINFGMLPKGVPIPPSGPSQRTSXYPPPPPRASSVI 355

Query: 137 LHEESKIHFVRYRRNAPIPPSAPSGR 163
           L+++SKI+     R  PIPP   S R
Sbjct: 356 LNKQSKIYLGMLPRGVPIPPPGLSQR 381

BLAST of HG10017714 vs. ExPASy TrEMBL
Match: A0A5D3CGG1 (Proline-rich protein HaeIII subfamily 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold315G00020 PE=4 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 1.1e-28
Identity = 78/136 (57.35%), Postives = 98/136 (72.06%), Query Frame = 0

Query: 4   HFSLGKRKRVPDLAPPFSLGILSNKERTSPSGPSQRTSDNTPPYRMPHPSFYKSNLGSAY 63
           HFS  K K++PDLAPPFSLGILS   RT PSG SQ TS+N P   +     +K ++ + +
Sbjct: 59  HFSWPKPKKIPDLAPPFSLGILSKGIRTPPSGLSQGTSNNPPSPHVAPIILHKESMVN-F 118

Query: 64  GILPKGMRIPPSGPSQRSSESPPPPPHVPSVVLHEESGINFRVLPKEVRIPPSGPSKRFS 123
           GILPKG+RIPPSGPS+R+S+ PPP  +  S+   +ES I + +LPK VRIPPSGPSKR S
Sbjct: 119 GILPKGVRIPPSGPSRRTSDPPPPLSNFHSI---KESRIKYGILPKGVRIPPSGPSKRNS 178

Query: 124 DYPPPPP---HAPSVV 137
           DY PPPP   HAPS++
Sbjct: 179 DYYPPPPMHLHAPSII 190

BLAST of HG10017714 vs. ExPASy TrEMBL
Match: A0A6J1HRH7 (actin cytoskeleton-regulatory complex protein PAN1-like OS=Cucurbita maxima OX=3661 GN=LOC111467141 PE=4 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 1.1e-28
Identity = 74/146 (50.68%), Postives = 93/146 (63.70%), Query Frame = 0

Query: 17  APPFSLGILSNKERTSPSGPSQRTSDNTPPYRMPHPSFYKSNLGSAYGILPKGMRIPPSG 76
           +P    G+L       PS PSQRTSD  PP           +     G+LP+G+ IPPSG
Sbjct: 236 SPSLVFGMLPKGVPIPPSRPSQRTSDYPPPPPRASSIILNKHSKINLGMLPRGVPIPPSG 295

Query: 77  PSQRSSESPPPPPHVPSVVLHEESGINFRVLPKEVRIPPSGPSKRFSDYPPPPPHAPSVV 136
           PSQR+S+ PPPPPH  SV+L+++S INF +LPK V IPPSGPS+R S YPPPPP A SV+
Sbjct: 296 PSQRTSDYPPPPPHASSVILNKQSKINFGMLPKGVPIPPSGPSQRTSXYPPPPPRASSVI 355

Query: 137 LHEESKIHFVRYRRNAPIPPSAPSGR 163
           L+++SKI+     R  PIPP   S R
Sbjct: 356 LNKQSKIYLGMLPRGVPIPPPGLSQR 381

BLAST of HG10017714 vs. ExPASy TrEMBL
Match: A0A5D3BP86 (Proline-rich protein HaeIII subfamily 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold109G00050 PE=4 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 1.2e-25
Identity = 73/135 (54.07%), Postives = 87/135 (64.44%), Query Frame = 0

Query: 2   HMHFSLGKRKRVPDLAPPFSLGILSNKERTSPSGPSQRTSDNTPPYRMPHPSFYKSNLGS 61
           ++HFSL K K  P+    F  GI S   R  PSGPSQR+SD+ P   M  P   + N   
Sbjct: 57  YIHFSLTKSKGKPEFDTHFRFGIFSKDVRIPPSGPSQRSSDSPPSPSMILPKESRIN--- 116

Query: 62  AYGILPKGMRIPPSGPSQRSSESPPPPPHVPSVVLHEESGINFRVLPKEVRIPPSGPSKR 121
            +GILPKG RIPPSGPSQR S+SP P    PS  LH+ S + F +LPK   IPPSGPSKR
Sbjct: 117 -FGILPKGSRIPPSGPSQRFSDSPLP----PSTFLHKGSNMIFGMLPKGHHIPPSGPSKR 176

Query: 122 FSDYPPPPPHAPSVV 137
            SD PPPPPH+PS++
Sbjct: 177 TSDNPPPPPHSPSLI 183

BLAST of HG10017714 vs. ExPASy TrEMBL
Match: A0A5A7T8R0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold36G001740 PE=4 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 3.7e-16
Identity = 63/135 (46.67%), Postives = 78/135 (57.78%), Query Frame = 0

Query: 2   HMHFS--LGKRKRVPDLAPPFSLGILSNKERTSPS----------GPSQRTSDNTP-PYR 61
           H+ FS    K KRVPDLAPPFSLGIL+N  R  PS           P      + P P R
Sbjct: 111 HIRFSWVWPKPKRVPDLAPPFSLGILNNHLRNPPSENELGHSITKHPKNHIRFSWPKPKR 170

Query: 62  MPH--PSFYKSNLGSAYGILPKGMRIPPSGPSQRSSESPPPPPHVPSVVLHEESGINFRV 121
           +P   P F       + GIL K +R PP G SQR+ ++P PPPH   ++LH++S I F +
Sbjct: 171 VPDLAPPF-------SLGILLKDVRTPPFGSSQRTLDNPSPPPHAVPIILHKKSKIKFGI 230

BLAST of HG10017714 vs. ExPASy TrEMBL
Match: A0A6P5RDM4 (formin-like protein 5 OS=Prunus avium OX=42229 GN=LOC110745147 PE=4 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 1.1e-15
Identity = 69/167 (41.32%), Postives = 78/167 (46.71%), Query Frame = 0

Query: 3   MHFSLGKRKRVPDLAPP-------FSLGILSNKERTSPSGPSQRTSDNTPPYRMPHPSFY 62
           ++F    R RVP   PP       F+ G L       PS PS+RTS   PP   PHP   
Sbjct: 37  LNFWKAARARVPPTGPPNTGTSRKFNFGTLPKGTLIPPSWPSKRTSRPPPP--PPHP--- 96

Query: 63  KSNLGSAYGILPKGMRIPPSGPSQRSSESPPPPPHVPSVVLHEESGINFRVLPKEVRIPP 122
                S +G LPK   IPPSGPS R+S+ PPPP              NF  LPK   IPP
Sbjct: 97  -----SNFGTLPKYTPIPPSGPSGRTSDPPPPP-------------FNFGTLPKYTPIPP 156

Query: 123 SGPSKRFSDYPPPPPHAPSVVLHEESKIHFVRYRRNAPIPPSAPSGR 163
           SGPS R SD PPPP              +F    +  PIPPS PSGR
Sbjct: 157 SGPSGRTSDPPPPP-------------FNFGTLPKYTPIPPSGPSGR 167

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038882352.12.2e-3964.44uncharacterized protein LOC120073615 [Benincasa hispida][more]
KAG6603169.12.2e-3154.79hypothetical protein SDJN03_03778, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_031744042.13.6e-2952.17proline-rich receptor-like protein kinase PERK9 [Cucumis sativus][more]
KAA0040932.12.3e-2857.35proline-rich protein HaeIII subfamily 1-like [Cucumis melo var. makuwa] >TYK1060... [more]
XP_022967687.12.3e-2850.68actin cytoskeleton-regulatory complex protein PAN1-like [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3CGG11.1e-2857.35Proline-rich protein HaeIII subfamily 1-like OS=Cucumis melo var. makuwa OX=1194... [more]
A0A6J1HRH71.1e-2850.68actin cytoskeleton-regulatory complex protein PAN1-like OS=Cucurbita maxima OX=3... [more]
A0A5D3BP861.2e-2554.07Proline-rich protein HaeIII subfamily 1-like OS=Cucumis melo var. makuwa OX=1194... [more]
A0A5A7T8R03.7e-1646.67Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A6P5RDM41.1e-1541.32formin-like protein 5 OS=Prunus avium OX=42229 GN=LOC110745147 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 25..47
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..135
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 120..134
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 79..93
NoneNo IPR availablePANTHERPTHR33599:SF13FORMIN-LIKE PROTEIN 20coord: 99..163
coord: 20..90
IPR039639Protein IDA-likePANTHERPTHR33599PROTEIN IDA-LIKE 5coord: 99..163
IPR039639Protein IDA-likePANTHERPTHR33599PROTEIN IDA-LIKE 5coord: 20..90

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10017714.1HG10017714.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0010227 floral organ abscission