HG10017635 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10017635
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	polygalacturonase QRT3-like
Location	Chr03: 17509002 .. 17514070 (+)
RNA-Seq Expression	HG10017635
Synteny	HG10017635

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTAAAACCGACAGCACAGAATCACTTCTCCGAGCATTGTCTCATGCCTACGAGACGCCTAAGAGTGAAGAGTCGTCGTTGATCGGCGGCATCAGGAATCTGGGAGGTGCTCAGATCAATCTAGACGGTGAAAATTACTTGATCAGTCGTCCATTGCGATTACCGACGGCTGGTGTAGGCAATGTTATGGTACGCATTCCCACTCCCAATTATAGAATTTAGGTTTTTACTTATTTATTATTAAAAAAAAGGAAATAAAGGGAAATGGAATTAATTTAAATTTAGAACTCTTTTAATAGCAATGCAACTAATTTTGATAATTTTCAGTTGAAACGAGAAGGGATGAGTGGTTAGTGAAAATTAATTTAAGAGGTCATAAATGTCAATTCACATCCTTTTGATTCTAGAATAAGTTTATTTTCAAACCTATGTGAGAGGAAAAATCCCAACCTTTAATCTTTTGGTTAAGTACATCCTTTATATTTTATGTCATTCATGATGATGCTTCTCCTAACATACTCAACTAAACCCTTGTTTGGTCTTTATGGAAAACAAAATTTTATTATATTTATGACTTTCAAAAATCAATTTTTTGTTACTGAAATTATTGTTTTTGTTGCAAAATATGAACAAAACAAGAACAAAAGAAAGAACAAAAAAATAAAGTAGAGAGAATTAGAAAGTAGAGATAACAATTGAACTCAATTCTGGTGTGTATTACAAAGGCATTATATACCACTATTTATAGGATATGGGATGTTGTATGTTACAAGATTGAATTCAATAAGGGATATGTTACAACATGAAATTCAATAGGAGCTTTATGATATTTTGTAACCTATATATGTTATGGATATCTATATTCATATATTACATTTATAATAGTTTTCTTCTAATTGTGATTATTATTATTTTTTACATTCATTTTACAATGGTTTCATCTTCAATAAGAAACATAATTTGAATGCTACTCCAAAAATGAAAACTGTGTTTTTAGTTTTCAAAATCTTGTTTTTATTTTTAAATTTTCTTTAAGAATTCACATGTGTTCTTTAAGAAATGGAAAAATTATACTAAAAATATATTGAATAAATCAACATAAATGAAAAAAATTAAAAATTAAAAATTAAAATGAAATAGTTTTCAAACATGACATCATTAATAACTTTCAATTATTGTGATCTTATTTTTCATTTTCCAAAGGTTAGCATTTGGAAAAGGGGAAAACATTGCTTTTCAATTAAAACATAGTTGATTTTTTCTCTTTCTTTCAATTTAAATCATGCTTTCAAAAGTTATCCAAACTATGATATTAAGGGACTGTTTCAGGGCCATAATAAAATGAACTTGTAGTGTAATGTAATCTAAAATTTTATGTTTGGATTGAGTGTTTTTTTGCTCTATGTATAATATAAAACTCATTTTGTTCCGACAGTTTTTAACTCAACCCTCTTTCCCACTAATTTCACACTTCACTATCTCATTTTCATTCCGCCCTCGTTTTCTCACTCATTCAACACCCCTCTAATTTTCAGTAATCCTTATTACATTTCAACCCCCAAACAATCCCTAAATTTTCATCGACATGTCGATATTTTCATGTTCAACATCGACATAAAACGTGAATCAATATTTTTCGTTATATCATTAAAAAAAATCAAAATAGAAAAAATAGGCAACAAAATATCACGAATACAAATATAATATAAAATGTATAGAATATTTATTTACTACTTTTTTAAAAAAAAAAAAAAATTTATTTTTATAATTTTTCTAGAAATATATATTGATATTGTCATGTTAAATCTTGAACTAACAATAAATTGAAGTTTTATGTTAGGGTTCTTTTTCGAAGTTTTCTACCGATTAATATTAGTAGTATATATTTTCCCACATTTTAATATATTTTTTTAGTACAATAAGGGTAGGAGATTCCAATTATAGACCTCTTAGTCTCTAATAGATCTATATGTCAGTTTTACTTAAGCTCGCTTTAACTTATCATCTTCAAAATTACGCTTCTTTGTTAACTCAATTTATAAATTTAATTCATGAAATCTATTAAATTGTTATTATGATAGTGTATATATATATATATATATATTCTTTTTTTTTGCACATGTATGTATATAAATTGAACGTGTGTGATGCCAAAAAAAACATGTGCAATTAGTGGGAAAAAAGAGTTTTAAATATTTGGTTTAGGAAAAAAAACAACAAAAGCATCTACTTGATCTATCTAAAATGTAAAATATCATTTAAAAAAATTAAAAATAAAATGAATTGCCAGCTTTCTGCTTCAATCATCTTATATATTTTCATATATATATATATATTGAAAATTTTCCTTCTGCAATTGACTTTTTTTTTATTCTTATTACTTTTAATCAAACATTTTATGAACTCACTATCTATAATTGATGTCTACAAAATCAAATGTAGAATAAAAGATAAATATAGTATCAAAAAAATGCTATGGTTAAAGCTTATTGACATTGGTTTTATAGGGTTTGTTTTGGTAGGTAATTTAAACTTTTAGATTTTACCTTCACTAAGTTCAACGAATATGTTTTTGGTAGGCCATATGAATTATGATATCAAATATGTACTATCCACCTCGAAATTAGAAGTTCGAACCCTCATTCCACATATTATCGAAAAAAAAATTCAACGAATATACTTTTGGTAGACTATATGGATTTTGTTTGTTTAAGATGTTGTCTAGATTCTGATCTAATCCAAATAGTTCAAATTTTGAAAATAATTTTTTTTGTGCATACAGATTTTGAATTTGAATTTTAAATTTTAAAATGCATAATTAAATTAAAAAAAGATATAAACGTTAATAAATATAGTATTTCGTGTTATAAATTTAATTCATTTTTATTAAATTAAAATATGTATTATATGATGTATTATAAATTATATGATATTACAAAATAATAATTATACAATTTCTTAACATAAAAATATTCACAAATGAACTAATAATATTTTATTCAACTTGATATTTACTGAGTAACCATAACTAGTTTTATACTTTATAAATATTTTACATTCAAGCTGATATTTACTGTGTAAGTACAAATTAGTTTTATATTTTATAAATATATTATCCAAGACATTTTGAAAAATTATTTAAATTTGAATTCAAATACATGTATATTTTAAAACAGTAAATACACACCTTTCTTTTCATTGACTGATTTATTCTCAAATTTTTGTTTTTCCAGATTCCCTACCAAAACATGCCTTTATATTTTTCAAACATGTCTCTATAGATTACAAAATTCATTTTTTCAACCACAATTTGAATGTTTGCTCCAAATATCATTAAAAGAGTTTTTCTCTTATGAAGTCAATGAATTATAAAAACATGTCTATATGATAAAAAAAATTGATAAAATTTTAGAGAGAAACAACAATGGAGATACACTTTTAGTTGAATTTTTTAAATATTTGTAGAGTTATTCTATGGTTAATTTGTGTCATACTTATTATTTACAAAACTTTATTTTATTAAAATTAAGGATAAATATCAATTTATACTCCTAAACGTTGGAGTTATACCAACTAAAACTTTGAACAAAATAATTGTATTAATTTAAACTTTTGGTCGACTTTTGTAAGTGTATCAATTTACACTATCTTCTAGATTTCGTTCAATGAACATCGTATGTAACTTATAATTTGAATAAATTAAACTCTTAAATTTTCATAATTTTCATAAGAGAATCAATTTAGTATTATGATGTGTTGGTTTAACAAAATGAATGATTAGAGTAAATACGTGAAAGATTCTCAAAGGAAAGTTTGATTAGTAGTCTAAATTGATTCATTCATGAAAGTTTAGTTGATATAATTATAAGTATGAAACATAATAGAGCTTACAAAAATTTAGGATTTAAATTGTTTCGGAGTATAAATAGATATTTTTCTCTAAAAATTAAAGAGTTTATGAGATGAATTTGAGTTGTTTTTTTGGTAACTTGTTTTAGATACACGGAGGAAGTTTACGCGCTTCAGACGATTTTCCCGTTAATAGTTACCTGATCGAACTGTCGTCGTCGTCGGCGGCGGCGGCGCAGAAAATTAAAAAGCAGAAAGTGACGAACTCCATGGAAGATGTGAACCTTAGTTCTTCTTCATCTTATAGTTACGAATTCATCACTTTCAGAGATCTTCTATTGGATTCCAATTACAGAGGCGGCGGCATTTCAATCATCAATTCATTAAGAACAACCATAGAAAATTGCTACATCACACATTTCACCACCACCGGAATTTCAGTTCAAAGCGGCCACGAAACCTACATCCGAACCTCCTTCCTCGGCCAACACATCACCGCCGGCGCCGATCTCGGTGAACGGAACTTCTCCGCCATCGGAATCAACCTCAACAATAATGACAACTCTGTTACCGATGTCGTCATTTTCTCCGCCGCCATTGGAATCCTCATCTCCGGCCAAGCGAACATCCTCACAGGCATTCATTGCTACAACAAGGCCACCGCATTCGGCGGCGTTGGAATTTACTTGAAATTACCTGGATTAACACAAACCAGAATCGTGAATTCGTACATGGATTTTACCGGAATCGTAGCGGAAGATCCAGTTCAACTCCTGATTTCTAATACATTCTTCCTTGGCGATGCTTCGATTAGACTGAAATCGATTAACGGCGTTGTGAATGGAGTGAACATTGTGGATAATATGTTTTGTGGATCGGAGAAAGGAGTGGCGATTGTTGAACTCGATGAATCGAAATCGGAATTCAAGAAAATAGGTCGGGTTGTGATTGAGAGGAACAACGCGATTGGAATGCAGATGAAATCGACGGCGGCGAACGGAGAAATTAAAGGAAATGGAACTTCGTGGATTATGGATTTCAATTCGATTTTGGTGTTTCCGAATCTGATTAGGAATGTTCAATACTCATTTCGAAGCATTGATAGTGGATTTCCAAGGCACATTGTGAGAAATGTATCGGAAAATCGAGTGGTGATTGAGACGGACGTTGCGGTGGCCGGAAGCTTGTTTGTGGCGGTGGATCAAGGGCAGAGGTAG

mRNA sequence

ATGGGTAAAACCGACAGCACAGAATCACTTCTCCGAGCATTGTCTCATGCCTACGAGACGCCTAAGAGTGAAGAGTCGTCGTTGATCGGCGGCATCAGGAATCTGGGAGGTGCTCAGATCAATCTAGACGGTGAAAATTACTTGATCAGTCGTCCATTGCGATTACCGACGGCTGGTGTAGGCAATGTTATGATACACGGAGGAAGTTTACGCGCTTCAGACGATTTTCCCGTTAATAGTTACCTGATCGAACTGTCGTCGTCGTCGGCGGCGGCGGCGCAGAAAATTAAAAAGCAGAAAGTGACGAACTCCATGGAAGATGTGAACCTTAGTTCTTCTTCATCTTATAGTTACGAATTCATCACTTTCAGAGATCTTCTATTGGATTCCAATTACAGAGGCGGCGGCATTTCAATCATCAATTCATTAAGAACAACCATAGAAAATTGCTACATCACACATTTCACCACCACCGGAATTTCAGTTCAAAGCGGCCACGAAACCTACATCCGAACCTCCTTCCTCGGCCAACACATCACCGCCGGCGCCGATCTCGGTGAACGGAACTTCTCCGCCATCGGAATCAACCTCAACAATAATGACAACTCTGTTACCGATGTCGTCATTTTCTCCGCCGCCATTGGAATCCTCATCTCCGGCCAAGCGAACATCCTCACAGGCATTCATTGCTACAACAAGGCCACCGCATTCGGCGGCGTTGGAATTTACTTGAAATTACCTGGATTAACACAAACCAGAATCGTGAATTCGTACATGGATTTTACCGGAATCGTAGCGGAAGATCCAGTTCAACTCCTGATTTCTAATACATTCTTCCTTGGCGATGCTTCGATTAGACTGAAATCGATTAACGGCGTTGTGAATGGAGTGAACATTGTGGATAATATGTTTTGTGGATCGGAGAAAGGAGTGGCGATTGTTGAACTCGATGAATCGAAATCGGAATTCAAGAAAATAGGTCGGGTTGTGATTGAGAGGAACAACGCGATTGGAATGCAGATGAAATCGACGGCGGCGAACGGAGAAATTAAAGGAAATGGAACTTCGTGGATTATGGATTTCAATTCGATTTTGGTGTTTCCGAATCTGATTAGGAATGTTCAATACTCATTTCGAAGCATTGATAGTGGATTTCCAAGGCACATTGTGAGAAATGTATCGGAAAATCGAGTGGTGATTGAGACGGACGTTGCGGTGGCCGGAAGCTTGTTTGTGGCGGTGGATCAAGGGCAGAGGTAG

Coding sequence (CDS)

ATGGGTAAAACCGACAGCACAGAATCACTTCTCCGAGCATTGTCTCATGCCTACGAGACGCCTAAGAGTGAAGAGTCGTCGTTGATCGGCGGCATCAGGAATCTGGGAGGTGCTCAGATCAATCTAGACGGTGAAAATTACTTGATCAGTCGTCCATTGCGATTACCGACGGCTGGTGTAGGCAATGTTATGATACACGGAGGAAGTTTACGCGCTTCAGACGATTTTCCCGTTAATAGTTACCTGATCGAACTGTCGTCGTCGTCGGCGGCGGCGGCGCAGAAAATTAAAAAGCAGAAAGTGACGAACTCCATGGAAGATGTGAACCTTAGTTCTTCTTCATCTTATAGTTACGAATTCATCACTTTCAGAGATCTTCTATTGGATTCCAATTACAGAGGCGGCGGCATTTCAATCATCAATTCATTAAGAACAACCATAGAAAATTGCTACATCACACATTTCACCACCACCGGAATTTCAGTTCAAAGCGGCCACGAAACCTACATCCGAACCTCCTTCCTCGGCCAACACATCACCGCCGGCGCCGATCTCGGTGAACGGAACTTCTCCGCCATCGGAATCAACCTCAACAATAATGACAACTCTGTTACCGATGTCGTCATTTTCTCCGCCGCCATTGGAATCCTCATCTCCGGCCAAGCGAACATCCTCACAGGCATTCATTGCTACAACAAGGCCACCGCATTCGGCGGCGTTGGAATTTACTTGAAATTACCTGGATTAACACAAACCAGAATCGTGAATTCGTACATGGATTTTACCGGAATCGTAGCGGAAGATCCAGTTCAACTCCTGATTTCTAATACATTCTTCCTTGGCGATGCTTCGATTAGACTGAAATCGATTAACGGCGTTGTGAATGGAGTGAACATTGTGGATAATATGTTTTGTGGATCGGAGAAAGGAGTGGCGATTGTTGAACTCGATGAATCGAAATCGGAATTCAAGAAAATAGGTCGGGTTGTGATTGAGAGGAACAACGCGATTGGAATGCAGATGAAATCGACGGCGGCGAACGGAGAAATTAAAGGAAATGGAACTTCGTGGATTATGGATTTCAATTCGATTTTGGTGTTTCCGAATCTGATTAGGAATGTTCAATACTCATTTCGAAGCATTGATAGTGGATTTCCAAGGCACATTGTGAGAAATGTATCGGAAAATCGAGTGGTGATTGAGACGGACGTTGCGGTGGCCGGAAGCTTGTTTGTGGCGGTGGATCAAGGGCAGAGGTAG

Protein sequence

MGKTDSTESLLRALSHAYETPKSEESSLIGGIRNLGGAQINLDGENYLISRPLRLPTAGVGNVMIHGGSLRASDDFPVNSYLIELSSSSAAAAQKIKKQKVTNSMEDVNLSSSSSYSYEFITFRDLLLDSNYRGGGISIINSLRTTIENCYITHFTTTGISVQSGHETYIRTSFLGQHITAGADLGERNFSAIGINLNNNDNSVTDVVIFSAAIGILISGQANILTGIHCYNKATAFGGVGIYLKLPGLTQTRIVNSYMDFTGIVAEDPVQLLISNTFFLGDASIRLKSINGVVNGVNIVDNMFCGSEKGVAIVELDESKSEFKKIGRVVIERNNAIGMQMKSTAANGEIKGNGTSWIMDFNSILVFPNLIRNVQYSFRSIDSGFPRHIVRNVSENRVVIETDVAVAGSLFVAVDQGQR

Homology

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BLAST of HG10017635 vs. NCBI nr
Match: XP_038883320.1 (LOW QUALITY PROTEIN: polygalacturonase QRT3-like [Benincasa hispida])

HSP 1 Score: 712.6 bits (1838), Expect = 2.0e-201
Identity = 375/424 (88.44%), Postives = 393/424 (92.69%), Query Frame = 0


Query: 2   GKTDSTESLLRALSHAYETPKSEESSLIGGIRNLGGAQINLDGENYLISRPLRLPTAGVG 61
           GK DSTESLLRALS  Y + KS+ SSLIG I+NLGGAQINLDG NYLISRPLRLP AGVG
Sbjct: 92  GKIDSTESLLRALSDVYSS-KSDGSSLIGSIKNLGGAQINLDGGNYLISRPLRLPAAGVG 151

Query: 62  NVMIHGGSLRASDDFPVNSYLIELSSS-----SAAAAQKIKKQKVTNSMEDVNLSSS-SS 121
           NVMIHGGSLRASDDFP N YLIELSSS       AAAQKIK  KV NS ED NLSSS SS
Sbjct: 152 NVMIHGGSLRASDDFPPNRYLIELSSSPSAAAEGAAAQKIKNHKVMNSTEDSNLSSSFSS 211

Query: 122 YSYEFITFRDLLLDSNYRGGGISIINSLRTTIENCYITHFTTTGISVQSGHETYIRTSFL 181
           YSYEFITFRDLLLDSNYRGGGISIINSLRTTI+NCYITHFTTTGISVQSGHETYI+T+FL
Sbjct: 212 YSYEFITFRDLLLDSNYRGGGISIINSLRTTIQNCYITHFTTTGISVQSGHETYIQTTFL 271

Query: 182 GQHITAGADLGERNFSAIGINLNNNDNSVTDVVIFSAAIGILISGQANILTGIHCYNKAT 241
           GQHITAGADLGERNFSAIGINLN+NDNSVTDVVIFSAAIGILISGQANILTGIHCYNKAT
Sbjct: 272 GQHITAGADLGERNFSAIGINLNSNDNSVTDVVIFSAAIGILISGQANILTGIHCYNKAT 331

Query: 242 AFGGVGIYLKLPGLTQTRIVNSYMDFTGIVAEDPVQLLISNTFFLGDASIRLKSINGVVN 301
            +GG GIYLKLPGLTQTRI+NSYMDFTGIVAEDPVQLLIS+TFFLGDASI+LKSINGVVN
Sbjct: 332 VYGGTGIYLKLPGLTQTRIMNSYMDFTGIVAEDPVQLLISSTFFLGDASIKLKSINGVVN 391

Query: 302 GVNIVDNMFCGSEKGVAIVELDESKSEFKKIGRVVIERNNAIGMQMKSTAANGEIKGNGT 361
           GVN++DN+FCGSEKGVAIVELDES+SEFKKI RVVIERNNAIGMQ+KSTAANGEIKGNGT
Sbjct: 392 GVNVMDNLFCGSEKGVAIVELDESRSEFKKIDRVVIERNNAIGMQVKSTAANGEIKGNGT 451

Query: 362 SWIMDFNSILVFPNLIRNVQYSFRSIDSGFPRHIVRNVSENRVVIETDVAVAGSLFVAVD 420
           SWI+DFN ILVF NLIRNVQYSFRSID GF RHIVRNVSENRVVIETDVAVAGS+FVAVD
Sbjct: 452 SWILDFNWILVFRNLIRNVQYSFRSIDGGFARHIVRNVSENRVVIETDVAVAGSVFVAVD 511

[Close]

BLAST of HG10017635 vs. NCBI nr
Match: XP_038881228.1 (polygalacturonase QRT3-like [Benincasa hispida])

HSP 1 Score: 647.5 bits (1669), Expect = 7.9e-182
Identity = 333/421 (79.10%), Postives = 370/421 (87.89%), Query Frame = 0


Query: 2   GKTDSTESLLRALSHAYETPKSEESSLIGGIRNLGGAQINLDGENYLISRPLRLPTAGVG 61
           GK DSTESLLRALS  Y +  + E SL+ GIRNLGGAQINLDG N+LISRPLRLP AGVG
Sbjct: 98  GKIDSTESLLRALSDVYNS--TSEGSLMEGIRNLGGAQINLDGGNFLISRPLRLPAAGVG 157

Query: 62  NVMIHGGSLRASDDFPVNSYLIEL----SSSSAAAAQKIKKQKVTNSMEDVNLSSSSSYS 121
           NVMIHGGSLRASDDFP + YLIEL    SSSS +AA+KIK Q+  NS ED  LSSSSSY+
Sbjct: 158 NVMIHGGSLRASDDFPSDGYLIELSPPSSSSSLSAAKKIKYQRAMNSTEDAMLSSSSSYN 217

Query: 122 YEFITFRDLLLDSNYRGGGISIINSLRTTIENCYITHFTTTGISVQSGHETYIRTSFLGQ 181
           YE+I+FRDLLLDSNYRGGGIS++NSLRTTI+NCYITHFTTTGISVQ GHETYIR+SFLGQ
Sbjct: 218 YEYISFRDLLLDSNYRGGGISVVNSLRTTIDNCYITHFTTTGISVQGGHETYIRSSFLGQ 277

Query: 182 HITAGADLGERNFSAIGINLNNNDNSVTDVVIFSAAIGILISGQANILTGIHCYNKATAF 241
           HITAG D GERNFS  GI L  NDN+VTDVVIFSAA GI++SGQANI+TG+HCYNKAT F
Sbjct: 278 HITAGGDPGERNFSGTGIRLVGNDNAVTDVVIFSAATGIVVSGQANIITGVHCYNKATGF 337

Query: 242 GGVGIYLKLPGLTQTRIVNSYMDFTGIVAEDPVQLLISNTFFLGDASIRLKSINGVVNGV 301
           GG GIYL+LPGLTQTRIVNSYMD+TGIVAEDPVQL ISNTFFLGDASI LKSING+V+GV
Sbjct: 338 GGTGIYLQLPGLTQTRIVNSYMDYTGIVAEDPVQLHISNTFFLGDASITLKSINGIVSGV 397

Query: 302 NIVDNMFCGSEKGVAIVELDESKSEFKKIGRVVIERNNAIGMQMKSTAANGEIKGNGTSW 361
           NIVDNMF GS KGVAIV+LDESKS FK+I +VVIERNNA GMQ+KST  + E++GNGTSW
Sbjct: 398 NIVDNMFSGSGKGVAIVQLDESKSAFKQIDQVVIERNNAKGMQVKSTVGSAELEGNGTSW 457

Query: 362 IMDFNSILVFPNLIRNVQYSFRSIDSGFPRHIVRNVSENRVVIETDVAVAGSLFVAVDQG 419
           I+DFNS+L FPN IRNVQYSFRS D+GFP+HIVRNVSENRVVIETDVAV GS+F  VDQG
Sbjct: 458 ILDFNSVLTFPNHIRNVQYSFRSSDNGFPKHIVRNVSENRVVIETDVAVVGSVFATVDQG 516

[Close]

BLAST of HG10017635 vs. NCBI nr
Match: XP_022146708.1 (polygalacturonase QRT3-like isoform X1 [Momordica charantia])

HSP 1 Score: 639.0 bits (1647), Expect = 2.8e-179
Identity = 331/422 (78.44%), Postives = 370/422 (87.68%), Query Frame = 0


Query: 2   GKTDSTESLLRALSHAYETPKSEESSLIGGIRNLGGAQINLDGENYLISRPLRLPTAGVG 61
           G+ DSTESLLRALS AY +P   E  L+ GIRNLGGA INLDG NYLISRPLRLP AGVG
Sbjct: 129 GRVDSTESLLRALSDAYGSP--GEGWLMDGIRNLGGAHINLDGGNYLISRPLRLPGAGVG 188

Query: 62  NVMIHGGSLRASDDFPVNSYLIELSSSSAAA----AQKIKKQKVTNSMEDVNLSSSSSYS 121
           N++I GGSLRASDDFP + YLI+LS SS+++      KIKKQK   SME V L+SSSSY+
Sbjct: 189 NIVIQGGSLRASDDFPSDGYLIDLSPSSSSSPSSPVAKIKKQKERKSMEVVKLASSSSYN 248

Query: 122 YEFITFRDLLLDSNYRGGGISIINSLRTTIENCYITHFTTTGISVQSGHETYIRTSFLGQ 181
           YE+ITFRDLLLDSNYRGGGISIINSLRT+I+NCYITHFTTTGISVQSGHET+IR+SFLGQ
Sbjct: 249 YEYITFRDLLLDSNYRGGGISIINSLRTSIDNCYITHFTTTGISVQSGHETFIRSSFLGQ 308

Query: 182 HITAGADLGERNFSAIGINLNNNDNSVTDVVIFSAAIGILISGQANILTGIHCYNKATAF 241
           HITAGAD GERNFS  GI+L  NDNSVTDVV+FSAA  IL+SGQANILTG+HCYNKAT F
Sbjct: 309 HITAGADPGERNFSGTGISLIGNDNSVTDVVVFSAATAILVSGQANILTGVHCYNKATGF 368

Query: 242 GGVGIYLKLPGLTQTRIVNSYMDFTGIVAEDPVQLLISNTFFLGDASIRLKSINGVVNGV 301
           GG GIYLKLPGLTQTRIVNSYMD+TGIVAEDPVQL ISNTFFLGDASI LKSINGVVNG+
Sbjct: 369 GGTGIYLKLPGLTQTRIVNSYMDYTGIVAEDPVQLHISNTFFLGDASITLKSINGVVNGL 428

Query: 302 NIVDNMFCGSEKGVAIVELDESKSEFKKIGRVVIERNNAIGMQMKSTAANGEIKGNGTSW 361
           NIVDNMF GS++GV IV+LD+SKS F++I +VVIERNNA GMQ+KSTAA+ E +GNGTSW
Sbjct: 429 NIVDNMFSGSDRGVPIVKLDQSKSAFREINQVVIERNNARGMQIKSTAASAESQGNGTSW 488

Query: 362 IMDFNSILVFPNLIRNVQYSFRSIDSGFPRHIVRNVSENRVVIETDVAVAGSLFVAVDQG 420
           I+DFN IL+FPNLIRNVQYSFRS   GFP+H+VRNVSENRVVIE+DVAVAGS+F  VDQG
Sbjct: 489 IIDFNPILLFPNLIRNVQYSFRSSGEGFPKHVVRNVSENRVVIESDVAVAGSVFATVDQG 548

[Close]

BLAST of HG10017635 vs. NCBI nr
Match: XP_022146709.1 (polygalacturonase QRT3-like isoform X2 [Momordica charantia])

HSP 1 Score: 639.0 bits (1647), Expect = 2.8e-179
Identity = 331/422 (78.44%), Postives = 370/422 (87.68%), Query Frame = 0


Query: 2   GKTDSTESLLRALSHAYETPKSEESSLIGGIRNLGGAQINLDGENYLISRPLRLPTAGVG 61
           G+ DSTESLLRALS AY +P   E  L+ GIRNLGGA INLDG NYLISRPLRLP AGVG
Sbjct: 129 GRVDSTESLLRALSDAYGSP--GEGWLMDGIRNLGGAHINLDGGNYLISRPLRLPGAGVG 188

Query: 62  NVMIHGGSLRASDDFPVNSYLIELSSSSAAA----AQKIKKQKVTNSMEDVNLSSSSSYS 121
           N++I GGSLRASDDFP + YLI+LS SS+++      KIKKQK   SME V L+SSSSY+
Sbjct: 189 NIVIQGGSLRASDDFPSDGYLIDLSPSSSSSPSSPVAKIKKQKERKSMEVVKLASSSSYN 248

Query: 122 YEFITFRDLLLDSNYRGGGISIINSLRTTIENCYITHFTTTGISVQSGHETYIRTSFLGQ 181
           YE+ITFRDLLLDSNYRGGGISIINSLRT+I+NCYITHFTTTGISVQSGHET+IR+SFLGQ
Sbjct: 249 YEYITFRDLLLDSNYRGGGISIINSLRTSIDNCYITHFTTTGISVQSGHETFIRSSFLGQ 308

Query: 182 HITAGADLGERNFSAIGINLNNNDNSVTDVVIFSAAIGILISGQANILTGIHCYNKATAF 241
           HITAGAD GERNFS  GI+L  NDNSVTDVV+FSAA  IL+SGQANILTG+HCYNKAT F
Sbjct: 309 HITAGADPGERNFSGTGISLIGNDNSVTDVVVFSAATAILVSGQANILTGVHCYNKATGF 368

Query: 242 GGVGIYLKLPGLTQTRIVNSYMDFTGIVAEDPVQLLISNTFFLGDASIRLKSINGVVNGV 301
           GG GIYLKLPGLTQTRIVNSYMD+TGIVAEDPVQL ISNTFFLGDASI LKSINGVVNG+
Sbjct: 369 GGTGIYLKLPGLTQTRIVNSYMDYTGIVAEDPVQLHISNTFFLGDASITLKSINGVVNGL 428

Query: 302 NIVDNMFCGSEKGVAIVELDESKSEFKKIGRVVIERNNAIGMQMKSTAANGEIKGNGTSW 361
           NIVDNMF GS++GV IV+LD+SKS F++I +VVIERNNA GMQ+KSTAA+ E +GNGTSW
Sbjct: 429 NIVDNMFSGSDRGVPIVKLDQSKSAFREINQVVIERNNARGMQIKSTAASAESQGNGTSW 488

Query: 362 IMDFNSILVFPNLIRNVQYSFRSIDSGFPRHIVRNVSENRVVIETDVAVAGSLFVAVDQG 420
           I+DFN IL+FPNLIRNVQYSFRS   GFP+H+VRNVSENRVVIE+DVAVAGS+F  VDQG
Sbjct: 489 IIDFNPILLFPNLIRNVQYSFRSSGEGFPKHVVRNVSENRVVIESDVAVAGSVFATVDQG 548

[Close]

BLAST of HG10017635 vs. NCBI nr
Match: KAG7026402.1 (Polygalacturonase QRT3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 609.4 bits (1570), Expect = 2.4e-170
Identity = 309/417 (74.10%), Postives = 356/417 (85.37%), Query Frame = 0


Query: 2   GKTDSTESLLRALSHAYETPKSEESSLIGGIRNLGGAQINLDGENYLISRPLRLPTAGVG 61
           GK DSTES+LR  S AY +  + + SLI G+RNLGG QINLDG +YLISRPLRLP AGVG
Sbjct: 86  GKNDSTESILRVFSDAYGS--ASDLSLIDGVRNLGGVQINLDGGHYLISRPLRLPGAGVG 145

Query: 62  NVMIHGGSLRASDDFPVNSYLIELSSSSAAAAQKIKKQKVTNSMEDVNLSSSSSYSYEFI 121
           N++I GGS  ASDDFP + YLIELS S +AAA+ ++  KV NS ED +L+SS+SY+YE+I
Sbjct: 146 NIVIQGGSFHASDDFPSDGYLIELSPSPSAAAKIMENNKVMNSAEDASLTSSTSYNYEYI 205

Query: 122 TFRDLLLDSNYRGGGISIINSLRTTIENCYITHFTTTGISVQSGHETYIRTSFLGQHITA 181
           TFRDLLLD NYRGGGISI+NSLR TI+NCYITHF TTGISV+ GHETYIR+SFLGQHITA
Sbjct: 206 TFRDLLLDCNYRGGGISIVNSLRITIDNCYITHFATTGISVRGGHETYIRSSFLGQHITA 265

Query: 182 GADLGERNFSAIGINLNNNDNSVTDVVIFSAAIGILISGQANILTGIHCYNKATAFGGVG 241
           G D GERNFS  GI+L  NDN+V DVVIFSAA GI ISGQAN+++G+HCYNKAT FGG G
Sbjct: 266 GGDPGERNFSGTGISLVGNDNAVIDVVIFSAATGIFISGQANLISGVHCYNKATGFGGTG 325

Query: 242 IYLKLPGLTQTRIVNSYMDFTGIVAEDPVQLLISNTFFLGDASIRLKSINGVVNGVNIVD 301
           IYL+LPGLTQTRIV+SYMD+TGIVAEDPVQL ISNT FLGDA+I LKSINGVVNG+NIVD
Sbjct: 326 IYLQLPGLTQTRIVDSYMDYTGIVAEDPVQLHISNTLFLGDAAITLKSINGVVNGLNIVD 385

Query: 302 NMFCGSEKGVAIVELDESKSEFKKIGRVVIERNNAIGMQMKSTAANGEIKGNGTSWIMDF 361
           NMF GS  GVAIV+LDESKS FK+I +VVI RNN  GMQ+KST  + E +GNGTSW +DF
Sbjct: 386 NMFSGSNAGVAIVQLDESKSAFKQIDQVVIARNNVKGMQVKSTVGSAEWQGNGTSWTVDF 445

Query: 362 NSILVFPNLIRNVQYSFRSIDSGFPRHIVRNVSENRVVIETDVAVAGSLFVAVDQGQ 419
           N +LVFPNLIRNVQYSFRS DSGFP+H+VRNVS+NRVVIETDVAV+GS++  VDQGQ
Sbjct: 446 NPVLVFPNLIRNVQYSFRSTDSGFPKHMVRNVSDNRVVIETDVAVSGSVYARVDQGQ 500

[Close]

BLAST of HG10017635 vs. ExPASy Swiss-Prot
Match: O49432 (Polygalacturonase QRT3 OS=Arabidopsis thaliana OX=3702 GN=QRT3 PE=2 SV=1)

HSP 1 Score: 485.7 bits (1249), Expect = 5.2e-136
Identity = 248/418 (59.33%), Postives = 313/418 (74.88%), Query Frame = 0


Query: 2   GKTDSTESLLRALSHAYETPKSEESSLIGGIRNLGGAQINLDGENYLISRPLRLPTAGVG 61
           GK DST+++L+A+  A++ P      L+ GI +LGGA+I+L G +YLISRPLR P+AG G
Sbjct: 87  GKLDSTDAILKAMEEAFDGP--NHGVLMQGINDLGGARIDLQGGSYLISRPLRFPSAGAG 146

Query: 62  NVMIHGGSLRASDDFPVNSYLIELSSSSAAAAQKIKKQKVTNSMEDVNLSSSSSYSYEFI 121
           N++I GG+LRAS+DFPV+ YLIEL                         SS   Y +E+I
Sbjct: 147 NLLISGGTLRASNDFPVDRYLIELKDE----------------------SSKLQYIFEYI 206

Query: 122 TFRDLLLDSNYRGGGISIINSLRTTIENCYITHF-TTTGISVQSGHETYIRTSFLGQHIT 181
           T RDLL+D NYRGG I++INSLRT+I+NCYIT F  T GI V+SGHETYIR SFLGQHIT
Sbjct: 207 TLRDLLIDCNYRGGAIAVINSLRTSIDNCYITRFGDTNGILVKSGHETYIRNSFLGQHIT 266

Query: 182 AGADLGERNFSAIGINLNNNDNSVTDVVIFSAAIGILISGQANILTGIHCYNKATAFGGV 241
           AG D GER+FS   INL  NDN+VTD VIFSA IG+++SGQAN+L+G+HCYNKAT FGG 
Sbjct: 267 AGGDRGERSFSGTAINLMGNDNAVTDTVIFSARIGVMVSGQANLLSGVHCYNKATGFGGT 326

Query: 242 GIYLKLPGLTQTRIVNSYMDFTGIVAEDPVQLLISNTFFLGDASIRLKSINGVVNGVNIV 301
           GIYL+LPGLTQ RIVNSY+D+TGIVAEDPVQL IS TFFLGDA I LKSI G + GV+IV
Sbjct: 327 GIYLRLPGLTQNRIVNSYLDYTGIVAEDPVQLQISGTFFLGDAFILLKSIAGYIRGVSIV 386

Query: 302 DNMFCGSEKGVAIVELDESKSEFKKIGRVVIERNNAIGMQMKSTAANGEIKGNGTSWIMD 361
           DNMF GS  GV IV+LD+  + F  +G+VV++RN+  GM  KST A G + GNGTSW +D
Sbjct: 387 DNMFSGSGHGVQIVQLDQRNTAFDDVGQVVVDRNSVNGMVEKSTVARGSVDGNGTSWTVD 446

Query: 362 FNSILVFPNLIRNVQYSFRSIDSG-FPRHIVRNVSENRVVIETDVAVAGSLFVAVDQG 418
           FN +L+FP+LI +VQY+  + ++G FP H +RNVS+NRVV+ET+  V G+++V V+QG
Sbjct: 447 FNPVLLFPDLINHVQYTLVASEAGVFPLHALRNVSDNRVVVETNAPVTGTVYVTVNQG 480

[Close]

BLAST of HG10017635 vs. ExPASy TrEMBL
Match: A0A6J1CZ95 (polygalacturonase QRT3-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111015845 PE=4 SV=1)

HSP 1 Score: 639.0 bits (1647), Expect = 1.4e-179
Identity = 331/422 (78.44%), Postives = 370/422 (87.68%), Query Frame = 0


Query: 2   GKTDSTESLLRALSHAYETPKSEESSLIGGIRNLGGAQINLDGENYLISRPLRLPTAGVG 61
           G+ DSTESLLRALS AY +P   E  L+ GIRNLGGA INLDG NYLISRPLRLP AGVG
Sbjct: 129 GRVDSTESLLRALSDAYGSP--GEGWLMDGIRNLGGAHINLDGGNYLISRPLRLPGAGVG 188

Query: 62  NVMIHGGSLRASDDFPVNSYLIELSSSSAAA----AQKIKKQKVTNSMEDVNLSSSSSYS 121
           N++I GGSLRASDDFP + YLI+LS SS+++      KIKKQK   SME V L+SSSSY+
Sbjct: 189 NIVIQGGSLRASDDFPSDGYLIDLSPSSSSSPSSPVAKIKKQKERKSMEVVKLASSSSYN 248

Query: 122 YEFITFRDLLLDSNYRGGGISIINSLRTTIENCYITHFTTTGISVQSGHETYIRTSFLGQ 181
           YE+ITFRDLLLDSNYRGGGISIINSLRT+I+NCYITHFTTTGISVQSGHET+IR+SFLGQ
Sbjct: 249 YEYITFRDLLLDSNYRGGGISIINSLRTSIDNCYITHFTTTGISVQSGHETFIRSSFLGQ 308

Query: 182 HITAGADLGERNFSAIGINLNNNDNSVTDVVIFSAAIGILISGQANILTGIHCYNKATAF 241
           HITAGAD GERNFS  GI+L  NDNSVTDVV+FSAA  IL+SGQANILTG+HCYNKAT F
Sbjct: 309 HITAGADPGERNFSGTGISLIGNDNSVTDVVVFSAATAILVSGQANILTGVHCYNKATGF 368

Query: 242 GGVGIYLKLPGLTQTRIVNSYMDFTGIVAEDPVQLLISNTFFLGDASIRLKSINGVVNGV 301
           GG GIYLKLPGLTQTRIVNSYMD+TGIVAEDPVQL ISNTFFLGDASI LKSINGVVNG+
Sbjct: 369 GGTGIYLKLPGLTQTRIVNSYMDYTGIVAEDPVQLHISNTFFLGDASITLKSINGVVNGL 428

Query: 302 NIVDNMFCGSEKGVAIVELDESKSEFKKIGRVVIERNNAIGMQMKSTAANGEIKGNGTSW 361
           NIVDNMF GS++GV IV+LD+SKS F++I +VVIERNNA GMQ+KSTAA+ E +GNGTSW
Sbjct: 429 NIVDNMFSGSDRGVPIVKLDQSKSAFREINQVVIERNNARGMQIKSTAASAESQGNGTSW 488

Query: 362 IMDFNSILVFPNLIRNVQYSFRSIDSGFPRHIVRNVSENRVVIETDVAVAGSLFVAVDQG 420
           I+DFN IL+FPNLIRNVQYSFRS   GFP+H+VRNVSENRVVIE+DVAVAGS+F  VDQG
Sbjct: 489 IIDFNPILLFPNLIRNVQYSFRSSGEGFPKHVVRNVSENRVVIESDVAVAGSVFATVDQG 548

[Close]

BLAST of HG10017635 vs. ExPASy TrEMBL
Match: A0A6J1CYV3 (polygalacturonase QRT3-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111015845 PE=4 SV=1)

HSP 1 Score: 639.0 bits (1647), Expect = 1.4e-179
Identity = 331/422 (78.44%), Postives = 370/422 (87.68%), Query Frame = 0


Query: 2   GKTDSTESLLRALSHAYETPKSEESSLIGGIRNLGGAQINLDGENYLISRPLRLPTAGVG 61
           G+ DSTESLLRALS AY +P   E  L+ GIRNLGGA INLDG NYLISRPLRLP AGVG
Sbjct: 129 GRVDSTESLLRALSDAYGSP--GEGWLMDGIRNLGGAHINLDGGNYLISRPLRLPGAGVG 188

Query: 62  NVMIHGGSLRASDDFPVNSYLIELSSSSAAA----AQKIKKQKVTNSMEDVNLSSSSSYS 121
           N++I GGSLRASDDFP + YLI+LS SS+++      KIKKQK   SME V L+SSSSY+
Sbjct: 189 NIVIQGGSLRASDDFPSDGYLIDLSPSSSSSPSSPVAKIKKQKERKSMEVVKLASSSSYN 248

Query: 122 YEFITFRDLLLDSNYRGGGISIINSLRTTIENCYITHFTTTGISVQSGHETYIRTSFLGQ 181
           YE+ITFRDLLLDSNYRGGGISIINSLRT+I+NCYITHFTTTGISVQSGHET+IR+SFLGQ
Sbjct: 249 YEYITFRDLLLDSNYRGGGISIINSLRTSIDNCYITHFTTTGISVQSGHETFIRSSFLGQ 308

Query: 182 HITAGADLGERNFSAIGINLNNNDNSVTDVVIFSAAIGILISGQANILTGIHCYNKATAF 241
           HITAGAD GERNFS  GI+L  NDNSVTDVV+FSAA  IL+SGQANILTG+HCYNKAT F
Sbjct: 309 HITAGADPGERNFSGTGISLIGNDNSVTDVVVFSAATAILVSGQANILTGVHCYNKATGF 368

Query: 242 GGVGIYLKLPGLTQTRIVNSYMDFTGIVAEDPVQLLISNTFFLGDASIRLKSINGVVNGV 301
           GG GIYLKLPGLTQTRIVNSYMD+TGIVAEDPVQL ISNTFFLGDASI LKSINGVVNG+
Sbjct: 369 GGTGIYLKLPGLTQTRIVNSYMDYTGIVAEDPVQLHISNTFFLGDASITLKSINGVVNGL 428

Query: 302 NIVDNMFCGSEKGVAIVELDESKSEFKKIGRVVIERNNAIGMQMKSTAANGEIKGNGTSW 361
           NIVDNMF GS++GV IV+LD+SKS F++I +VVIERNNA GMQ+KSTAA+ E +GNGTSW
Sbjct: 429 NIVDNMFSGSDRGVPIVKLDQSKSAFREINQVVIERNNARGMQIKSTAASAESQGNGTSW 488

Query: 362 IMDFNSILVFPNLIRNVQYSFRSIDSGFPRHIVRNVSENRVVIETDVAVAGSLFVAVDQG 420
           I+DFN IL+FPNLIRNVQYSFRS   GFP+H+VRNVSENRVVIE+DVAVAGS+F  VDQG
Sbjct: 489 IIDFNPILLFPNLIRNVQYSFRSSGEGFPKHVVRNVSENRVVIESDVAVAGSVFATVDQG 548

[Close]

BLAST of HG10017635 vs. ExPASy TrEMBL
Match: E5GCM0 (Polygalacturonase OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 608.6 bits (1568), Expect = 2.0e-170
Identity = 311/417 (74.58%), Postives = 355/417 (85.13%), Query Frame = 0


Query: 2   GKTDSTESLLRALSHAYETPKSEESSLIGGIRNLGGAQINLDGENYLISRPLRLPTAGVG 61
           GKTDSTESLL+A S  Y +  + E SL+ GIRNLGG QINLDG N+LISRPLRLP  GVG
Sbjct: 99  GKTDSTESLLQAFSDVYNS--NGEGSLMDGIRNLGGVQINLDGGNFLISRPLRLPGVGVG 158

Query: 62  NVMIHGGSLRASDDFPVNSYLIELSSSSAAAAQKIKKQKVTNSMEDVNL-SSSSSYSYEF 121
           NVMIHGGSLRASDDFP + YLIELSSSSAA     +K    +S  D  L SSSSSYSYE+
Sbjct: 159 NVMIHGGSLRASDDFPSDGYLIELSSSSAAKNFNNQKTINNSSTHDAILTSSSSSYSYEY 218

Query: 122 ITFRDLLLDSNYRGGGISIINSLRTTIENCYITHFTTTGISVQSGHETYIRTSFLGQHIT 181
           I+F+DLLLDSN+RGGGIS+INSLR TI+NCYITHFTT GISVQ GHE YIRTSFLGQHIT
Sbjct: 219 ISFKDLLLDSNFRGGGISVINSLRITIDNCYITHFTTIGISVQGGHEAYIRTSFLGQHIT 278

Query: 182 AGADLGERNFSAIGINLNNNDNSVTDVVIFSAAIGILISGQANILTGIHCYNKATAFGGV 241
           AG D GERNFS  GI+L  NDN++TDVVIFSAA GIL+SGQAN+LTG+HCYNKAT FGG 
Sbjct: 279 AGGDPGERNFSGTGISLVGNDNAITDVVIFSAATGILVSGQANVLTGVHCYNKATGFGGT 338

Query: 242 GIYLKLPGLTQTRIVNSYMDFTGIVAEDPVQLLISNTFFLGDASIRLKSINGVVNGVNIV 301
           GIYL+LPGLTQTRI+NSYMD+TGIVAEDPVQL I NTFFLGD+ I LKSINGV +GVNIV
Sbjct: 339 GIYLQLPGLTQTRILNSYMDYTGIVAEDPVQLQIVNTFFLGDSYITLKSINGVASGVNIV 398

Query: 302 DNMFCGSEKGVAIVELDESKSEFKKIGRVVIERNNAIGMQMKSTAANGEIKGNGTSWIMD 361
           DNMF GS+KGVAIV+LDESKS FK+I +V +ERNN  GMQ KST  + E++GNGTSW++D
Sbjct: 399 DNMFSGSDKGVAIVQLDESKSAFKQIDQVAVERNNVKGMQAKSTVGSAELEGNGTSWVLD 458

Query: 362 FNSILVFPNLIRNVQYSFRSIDSGFPRHIVRNVSENRVVIETDVAVAGSLFVAVDQG 418
           FN +L+FPNLI+NVQY+FRS D+GFP+HIVRNVS+N+VVIETDVAV GS+F  VDQG
Sbjct: 459 FNPVLLFPNLIKNVQYTFRSSDNGFPKHIVRNVSDNQVVIETDVAVVGSVFATVDQG 513

[Close]

BLAST of HG10017635 vs. ExPASy TrEMBL
Match: A0A0A0KMC1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G526410 PE=4 SV=1)

HSP 1 Score: 608.6 bits (1568), Expect = 2.0e-170
Identity = 303/418 (72.49%), Postives = 358/418 (85.65%), Query Frame = 0


Query: 2   GKTDSTESLLRALSHAYETPKSEESSLIGGIRNLGGAQINLDGENYLISRPLRLPTAGVG 61
           GKTDST+SLL+A S  Y +  + E SL+ GI+NLGG QINLDG N++ISRPLRLP  GVG
Sbjct: 98  GKTDSTDSLLKAFSDVYNS--NGEGSLMEGIKNLGGVQINLDGGNFMISRPLRLPGVGVG 157

Query: 62  NVMIHGGSLRASDDFPVNSYLIELSSSSAAAAQKIKKQKVTN--SMEDVNLSSSSSYSYE 121
           NV+IHGGSLRASDDFP + YLIELSSSS+A       QK  N  S + + +SS SSY+YE
Sbjct: 158 NVVIHGGSLRASDDFPSDGYLIELSSSSSAPKNSFDNQKTINSSSQDAILISSPSSYNYE 217

Query: 122 FITFRDLLLDSNYRGGGISIINSLRTTIENCYITHFTTTGISVQSGHETYIRTSFLGQHI 181
           +I+F+DLLLDSN+RGGGIS++NSLR TI+NCYITHFTT GISVQ GHETYIR+SFLGQHI
Sbjct: 218 YISFKDLLLDSNFRGGGISVLNSLRITIDNCYITHFTTIGISVQGGHETYIRSSFLGQHI 277

Query: 182 TAGADLGERNFSAIGINLNNNDNSVTDVVIFSAAIGILISGQANILTGIHCYNKATAFGG 241
           TAG D GERNFS  GI+L  NDN+VTDVVIFSAA G+L+ GQAN+LTG+HCYNKAT FGG
Sbjct: 278 TAGGDPGERNFSGTGISLLGNDNAVTDVVIFSAATGVLVQGQANVLTGVHCYNKATGFGG 337

Query: 242 VGIYLKLPGLTQTRIVNSYMDFTGIVAEDPVQLLISNTFFLGDASIRLKSINGVVNGVNI 301
            GIYL+LPGLTQTRI+NSYMD+TGIVAEDPVQL I+NTFFLGD+ I LKS+NGV +GVNI
Sbjct: 338 TGIYLQLPGLTQTRILNSYMDYTGIVAEDPVQLQIANTFFLGDSYITLKSMNGVASGVNI 397

Query: 302 VDNMFCGSEKGVAIVELDESKSEFKKIGRVVIERNNAIGMQMKSTAANGEIKGNGTSWIM 361
           VDNMF GS+KGVAIV+LDESKS FK++ +VV+ERNN  GMQ KST  + E++GNGTSW++
Sbjct: 398 VDNMFSGSDKGVAIVQLDESKSAFKQVDQVVVERNNVRGMQAKSTVGSAELEGNGTSWVL 457

Query: 362 DFNSILVFPNLIRNVQYSFRSIDSGFPRHIVRNVSENRVVIETDVAVAGSLFVAVDQG 418
           DFN +L+FPNLI+NVQY+FRSID+GFP+HIVRNVS+NRVVIETDVAV GS+F  VDQG
Sbjct: 458 DFNPVLLFPNLIKNVQYTFRSIDNGFPKHIVRNVSDNRVVIETDVAVVGSVFARVDQG 513

[Close]

BLAST of HG10017635 vs. ExPASy TrEMBL
Match: A0A1S3AYU3 (polygalacturonase QRT3-like OS=Cucumis melo OX=3656 GN=LOC103484272 PE=4 SV=1)

HSP 1 Score: 608.6 bits (1568), Expect = 2.0e-170
Identity = 311/417 (74.58%), Postives = 355/417 (85.13%), Query Frame = 0


Query: 2   GKTDSTESLLRALSHAYETPKSEESSLIGGIRNLGGAQINLDGENYLISRPLRLPTAGVG 61
           GKTDSTESLL+A S  Y +  + E SL+ GIRNLGG QINLDG N+LISRPLRLP  GVG
Sbjct: 99  GKTDSTESLLQAFSDVYNS--NGEGSLMDGIRNLGGVQINLDGGNFLISRPLRLPGVGVG 158

Query: 62  NVMIHGGSLRASDDFPVNSYLIELSSSSAAAAQKIKKQKVTNSMEDVNL-SSSSSYSYEF 121
           NVMIHGGSLRASDDFP + YLIELSSSSAA     +K    +S  D  L SSSSSYSYE+
Sbjct: 159 NVMIHGGSLRASDDFPSDGYLIELSSSSAAKNFNNQKTINNSSTHDAILTSSSSSYSYEY 218

Query: 122 ITFRDLLLDSNYRGGGISIINSLRTTIENCYITHFTTTGISVQSGHETYIRTSFLGQHIT 181
           I+F+DLLLDSN+RGGGIS+INSLR TI+NCYITHFTT GISVQ GHE YIRTSFLGQHIT
Sbjct: 219 ISFKDLLLDSNFRGGGISVINSLRITIDNCYITHFTTIGISVQGGHEAYIRTSFLGQHIT 278

Query: 182 AGADLGERNFSAIGINLNNNDNSVTDVVIFSAAIGILISGQANILTGIHCYNKATAFGGV 241
           AG D GERNFS  GI+L  NDN++TDVVIFSAA GIL+SGQAN+LTG+HCYNKAT FGG 
Sbjct: 279 AGGDPGERNFSGTGISLVGNDNAITDVVIFSAATGILVSGQANVLTGVHCYNKATGFGGT 338

Query: 242 GIYLKLPGLTQTRIVNSYMDFTGIVAEDPVQLLISNTFFLGDASIRLKSINGVVNGVNIV 301
           GIYL+LPGLTQTRI+NSYMD+TGIVAEDPVQL I NTFFLGD+ I LKSINGV +GVNIV
Sbjct: 339 GIYLQLPGLTQTRILNSYMDYTGIVAEDPVQLQIVNTFFLGDSYITLKSINGVASGVNIV 398

Query: 302 DNMFCGSEKGVAIVELDESKSEFKKIGRVVIERNNAIGMQMKSTAANGEIKGNGTSWIMD 361
           DNMF GS+KGVAIV+LDESKS FK+I +V +ERNN  GMQ KST  + E++GNGTSW++D
Sbjct: 399 DNMFSGSDKGVAIVQLDESKSAFKQIDQVAVERNNVKGMQAKSTVGSAELEGNGTSWVLD 458

Query: 362 FNSILVFPNLIRNVQYSFRSIDSGFPRHIVRNVSENRVVIETDVAVAGSLFVAVDQG 418
           FN +L+FPNLI+NVQY+FRS D+GFP+HIVRNVS+N+VVIETDVAV GS+F  VDQG
Sbjct: 459 FNPVLLFPNLIKNVQYTFRSSDNGFPKHIVRNVSDNQVVIETDVAVVGSVFATVDQG 513

[Close]

BLAST of HG10017635 vs. TAIR 10
Match: AT4G20050.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 485.7 bits (1249), Expect = 3.7e-137
Identity = 248/418 (59.33%), Postives = 313/418 (74.88%), Query Frame = 0


Query: 2   GKTDSTESLLRALSHAYETPKSEESSLIGGIRNLGGAQINLDGENYLISRPLRLPTAGVG 61
           GK DST+++L+A+  A++ P      L+ GI +LGGA+I+L G +YLISRPLR P+AG G
Sbjct: 87  GKLDSTDAILKAMEEAFDGP--NHGVLMQGINDLGGARIDLQGGSYLISRPLRFPSAGAG 146

Query: 62  NVMIHGGSLRASDDFPVNSYLIELSSSSAAAAQKIKKQKVTNSMEDVNLSSSSSYSYEFI 121
           N++I GG+LRAS+DFPV+ YLIEL                         SS   Y +E+I
Sbjct: 147 NLLISGGTLRASNDFPVDRYLIELKDE----------------------SSKLQYIFEYI 206

Query: 122 TFRDLLLDSNYRGGGISIINSLRTTIENCYITHF-TTTGISVQSGHETYIRTSFLGQHIT 181
           T RDLL+D NYRGG I++INSLRT+I+NCYIT F  T GI V+SGHETYIR SFLGQHIT
Sbjct: 207 TLRDLLIDCNYRGGAIAVINSLRTSIDNCYITRFGDTNGILVKSGHETYIRNSFLGQHIT 266

Query: 182 AGADLGERNFSAIGINLNNNDNSVTDVVIFSAAIGILISGQANILTGIHCYNKATAFGGV 241
           AG D GER+FS   INL  NDN+VTD VIFSA IG+++SGQAN+L+G+HCYNKAT FGG 
Sbjct: 267 AGGDRGERSFSGTAINLMGNDNAVTDTVIFSARIGVMVSGQANLLSGVHCYNKATGFGGT 326

Query: 242 GIYLKLPGLTQTRIVNSYMDFTGIVAEDPVQLLISNTFFLGDASIRLKSINGVVNGVNIV 301
           GIYL+LPGLTQ RIVNSY+D+TGIVAEDPVQL IS TFFLGDA I LKSI G + GV+IV
Sbjct: 327 GIYLRLPGLTQNRIVNSYLDYTGIVAEDPVQLQISGTFFLGDAFILLKSIAGYIRGVSIV 386

Query: 302 DNMFCGSEKGVAIVELDESKSEFKKIGRVVIERNNAIGMQMKSTAANGEIKGNGTSWIMD 361
           DNMF GS  GV IV+LD+  + F  +G+VV++RN+  GM  KST A G + GNGTSW +D
Sbjct: 387 DNMFSGSGHGVQIVQLDQRNTAFDDVGQVVVDRNSVNGMVEKSTVARGSVDGNGTSWTVD 446

Query: 362 FNSILVFPNLIRNVQYSFRSIDSG-FPRHIVRNVSENRVVIETDVAVAGSLFVAVDQG 418
           FN +L+FP+LI +VQY+  + ++G FP H +RNVS+NRVV+ET+  V G+++V V+QG
Sbjct: 447 FNPVLLFPDLINHVQYTLVASEAGVFPLHALRNVSDNRVVVETNAPVTGTVYVTVNQG 480

[Close]

BLAST of HG10017635 vs. TAIR 10
Match: AT4G20050.2 (Pectin lyase-like superfamily protein )

HSP 1 Score: 485.7 bits (1249), Expect = 3.7e-137
Identity = 248/418 (59.33%), Postives = 313/418 (74.88%), Query Frame = 0


Query: 2   GKTDSTESLLRALSHAYETPKSEESSLIGGIRNLGGAQINLDGENYLISRPLRLPTAGVG 61
           GK DST+++L+A+  A++ P      L+ GI +LGGA+I+L G +YLISRPLR P+AG G
Sbjct: 87  GKLDSTDAILKAMEEAFDGP--NHGVLMQGINDLGGARIDLQGGSYLISRPLRFPSAGAG 146

Query: 62  NVMIHGGSLRASDDFPVNSYLIELSSSSAAAAQKIKKQKVTNSMEDVNLSSSSSYSYEFI 121
           N++I GG+LRAS+DFPV+ YLIEL                         SS   Y +E+I
Sbjct: 147 NLLISGGTLRASNDFPVDRYLIELKDE----------------------SSKLQYIFEYI 206

Query: 122 TFRDLLLDSNYRGGGISIINSLRTTIENCYITHF-TTTGISVQSGHETYIRTSFLGQHIT 181
           T RDLL+D NYRGG I++INSLRT+I+NCYIT F  T GI V+SGHETYIR SFLGQHIT
Sbjct: 207 TLRDLLIDCNYRGGAIAVINSLRTSIDNCYITRFGDTNGILVKSGHETYIRNSFLGQHIT 266

Query: 182 AGADLGERNFSAIGINLNNNDNSVTDVVIFSAAIGILISGQANILTGIHCYNKATAFGGV 241
           AG D GER+FS   INL  NDN+VTD VIFSA IG+++SGQAN+L+G+HCYNKAT FGG 
Sbjct: 267 AGGDRGERSFSGTAINLMGNDNAVTDTVIFSARIGVMVSGQANLLSGVHCYNKATGFGGT 326

Query: 242 GIYLKLPGLTQTRIVNSYMDFTGIVAEDPVQLLISNTFFLGDASIRLKSINGVVNGVNIV 301
           GIYL+LPGLTQ RIVNSY+D+TGIVAEDPVQL IS TFFLGDA I LKSI G + GV+IV
Sbjct: 327 GIYLRLPGLTQNRIVNSYLDYTGIVAEDPVQLQISGTFFLGDAFILLKSIAGYIRGVSIV 386

Query: 302 DNMFCGSEKGVAIVELDESKSEFKKIGRVVIERNNAIGMQMKSTAANGEIKGNGTSWIMD 361
           DNMF GS  GV IV+LD+  + F  +G+VV++RN+  GM  KST A G + GNGTSW +D
Sbjct: 387 DNMFSGSGHGVQIVQLDQRNTAFDDVGQVVVDRNSVNGMVEKSTVARGSVDGNGTSWTVD 446

Query: 362 FNSILVFPNLIRNVQYSFRSIDSG-FPRHIVRNVSENRVVIETDVAVAGSLFVAVDQG 418
           FN +L+FP+LI +VQY+  + ++G FP H +RNVS+NRVV+ET+  V G+++V V+QG
Sbjct: 447 FNPVLLFPDLINHVQYTLVASEAGVFPLHALRNVSDNRVVVETNAPVTGTVYVTVNQG 480

[Close]

BLAST of HG10017635 vs. TAIR 10
Match: AT4G20040.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 379.8 bits (974), Expect = 2.8e-105
Identity = 201/416 (48.32%), Postives = 283/416 (68.03%), Query Frame = 0


Query: 2   GKTDSTESLLRALSHAYETPKSEESSLIGGIRNLGGAQINLDGENYLISRPLRLPTAGVG 61
           G  DS++++L AL+ A++     E  ++  + +LGG  I+L G +Y+I +PLR P++G G
Sbjct: 80  GGQDSSDAILEALTDAFQLQTGLE--MLPRVADLGGLVIDLQGGSYMIGKPLRFPSSGGG 139

Query: 62  NVMIHGGSLRASDDFPVNSYLIELSSSSAAAAQKIKKQKVTNSMEDVNLSSSSSYSYEFI 121
           N+++ GG+ RAS+ FP + +L+EL +S+A    K+  ++  +  +D     SS   YE +
Sbjct: 140 NLVVKGGTFRASELFPGDRHLVELVASNAKKPMKMSPEESFSDQKD----QSSGIFYEDV 199

Query: 122 TFRDLLLDSNYRGGGISIINSLRTTIENCYITHFTTTGISVQSGHETYIRTSFLGQHITA 181
           TF+D+L DS +RGGGI +I+S R  I NCY  HFTT GI VQ GHETYI  SFLGQH T 
Sbjct: 200 TFQDVLFDSRFRGGGILVIDSARIRITNCYFLHFTTQGIKVQGGHETYISNSFLGQHSTV 259

Query: 182 GADLGERNFSAIGINLNNNDNSVTDVVIFSAAIGILISGQANILTGIHCYNKATAFGGVG 241
           G D  ER F+  GI++++NDN++TDVVIFSA IGI ++G AN++TG+HCYNKAT FGG+G
Sbjct: 260 GGDREERGFTGTGIDISSNDNAITDVVIFSAGIGISLNGGANMVTGVHCYNKATWFGGIG 319

Query: 242 IYLKLPGLTQTRIVNSYMDFTGIVAEDPVQLLISNTFFLGDASIRLKSINGVVNGVNIVD 301
           I +K      TRI N Y+D+TGIV EDPV + ++N  FLGDA+I L+S++G ++GVNIV+
Sbjct: 320 ILVK---SHLTRIDNCYLDYTGIVIEDPVHVHVTNALFLGDANIVLRSVHGKISGVNIVN 379

Query: 302 NMFCGSEK-GVAIVELDESKSEFKKIGRVVIERNNAIGMQMKSTAANGEIKGNGTSWIMD 361
           NMF G+ K    IV+L+    EF  I +VVI++NNA GM +KST     +  NGT WI D
Sbjct: 380 NMFSGTAKNNFPIVKLE---GEFHDINQVVIDQNNAEGMMLKSTTGKAMVSANGTRWIAD 439

Query: 362 FNSILVFPNLIRNVQYSFRSIDSGFPRHIVRNVSENRVVIETDVAVAGSLFVAVDQ 417
           F+ +LVFPN I + Q+SF +     P + V NVS N VV+ETD AV G++ +   Q
Sbjct: 440 FSPVLVFPNRINHYQHSFFAQSGQIPANAVTNVSNNMVVVETDRAVTGTVSIIAYQ 483

The following BLAST results are available for this feature:

BLAST of HG10017635 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038883320.1	2.0e-201	88.44	LOW QUALITY PROTEIN: polygalacturonase QRT3-like [Benincasa hispida]	[more]
XP_038881228.1	7.9e-182	79.10	polygalacturonase QRT3-like [Benincasa hispida]	[more]
XP_022146708.1	2.8e-179	78.44	polygalacturonase QRT3-like isoform X1 [Momordica charantia]	[more]
XP_022146709.1	2.8e-179	78.44	polygalacturonase QRT3-like isoform X2 [Momordica charantia]	[more]
KAG7026402.1	2.4e-170	74.10	Polygalacturonase QRT3, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of HG10017635 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O49432	5.2e-136	59.33	Polygalacturonase QRT3 OS=Arabidopsis thaliana OX=3702 GN=QRT3 PE=2 SV=1	[more]

BLAST of HG10017635 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CZ95	1.4e-179	78.44	polygalacturonase QRT3-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A6J1CYV3	1.4e-179	78.44	polygalacturonase QRT3-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
E5GCM0	2.0e-170	74.58	Polygalacturonase OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
A0A0A0KMC1	2.0e-170	72.49	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G526410 PE=4 SV=1	[more]
A0A1S3AYU3	2.0e-170	74.58	polygalacturonase QRT3-like OS=Cucumis melo OX=3656 GN=LOC103484272 PE=4 SV=1	[more]

BLAST of HG10017635 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G20050.1	3.7e-137	59.33	Pectin lyase-like superfamily protein	[more]
AT4G20050.2	3.7e-137	59.33	Pectin lyase-like superfamily protein	[more]
AT4G20040.1	2.8e-105	48.32	Pectin lyase-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006626	Parallel beta-helix repeat	SMART	SM00710	pbh1	coord: 199..220 e-value: 1100.0 score: 6.9 coord: 294..315 e-value: 2000.0 score: 5.0 coord: 142..164 e-value: 2.6 score: 17.0
IPR012334	Pectin lyase fold	GENE3D	2.160.20.10		coord: 1..267 e-value: 1.6E-6 score: 29.5
None	No IPR available	PANTHER	PTHR33928:SF7	POLYGALACTURONASE QRT3	coord: 1..418
IPR039279	Polygalacturonase QRT3-like	PANTHER	PTHR33928	POLYGALACTURONASE QRT3	coord: 1..418
IPR011050	Pectin lyase fold/virulence factor	SUPERFAMILY	51126	Pectin lyase-like	coord: 2..342

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10017635.1	HG10017635.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0004650	polygalacturonase activity