HG10017624 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10017624
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionDUF1985 domain-containing protein
LocationChr03: 17053405 .. 17054351 (+)
RNA-Seq ExpressionHG10017624
SyntenyHG10017624
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGGAGGGGTCGGTTTGGAGCACCATAAGAGAGGGAGAAGAAGGTGAAGAAAGAGTGAGGAAAGAAGAAGAAATGTGAGTTTTTTATTTTTATTTTTGTTAATTCTTAAAAAAAAACGTGAGTGGTGTGTACTCCCATCTTTTCTCTTCTCTTCTCTTCTTTTTTTTTTTTAACTAAATAAAAATATATTGTGTGGATTTAGAAGATGTGGTGTCATTTACTTTTCCTTTTCCTTTATTTATTTTTCCTTTTATTCTAATACTTTTTCTTATTTAAAAAAAAGTAGTTCACCTCTTTAGTTTTACATTTTCCTTTAATTCCATTCATTTTCCAATTGTTCCTCCAACAACACTTTCCAAAACAACATCCAAATGACCATTTTCCCCCCAAATGTTGGTAGATCTTGAGTGGGTCTTACAGTATAGAAGCTAAATGTTTATTCTAAATACGAAGTCATTCTAATGATTAGGGATAAACTTAGTAGTAGACATTTAACGATGTTCGAATCTAGTCCTTTTTATCTATTCCTAAATCTAAAAATAAGTAAATTCCCTAACCAATTGTTATCCCACATCATCCGACGATAGTGTAGTATAATAAGGGAAGATGAACTAACGTTCAATTTTGAGGGGAAGATTGTGAAGTTTGGTATAAGTGACTTTGAGAAGATTACAGGACTAAACTATGGAGAACTTCCTACATTAGATACGCATAAGTTTAGAGAAAAGTTCCTTAAGAAATACTTTAAGGAGGATCAACTAATTATGAGAACTGAACTGAGTAAAATGTTTTTAACTAGAGAGTCAATTAAAAAGGATAAAGTGAAACTTGTCAAACTGTTGTTTCTGACAAACTTCCTACTGACAAAACAAGTAACAACTAGAGTCAAAATTAATCATATTAAGATGTTGGATGACGAGGTGCAATTTGATCAATATCCCTAG

mRNA sequence

ATGGGGGAGGGGTCGGTTTGGAGCACCATAAGAGAGGGAGAAGAAGGTGAAGAAAGAGTGAGGAAAGAAGAAGAAATTATAATAAGGGAAGATGAACTAACGTTCAATTTTGAGGGGAAGATTGTGAAGTTTGGTATAAGTGACTTTGAGAAGATTACAGGACTAAACTATGGAGAACTTCCTACATTAGATACGCATAAGTTTAGAGAAAAGTTCCTTAAGAAATACTTTAAGGAGGATCAACTAATTATGAGAACTGAACTGAGTAAAATGTTTTTAACTAGAGAGTCAATTAAAAAGGATAAAGTGAAACTTGTCAAACTGTTGTTTCTGACAAACTTCCTACTGACAAAACAAGTAACAACTAGAGTCAAAATTAATCATATTAAGATGTTGGATGACGAGGTGCAATTTGATCAATATCCCTAG

Coding sequence (CDS)

ATGGGGGAGGGGTCGGTTTGGAGCACCATAAGAGAGGGAGAAGAAGGTGAAGAAAGAGTGAGGAAAGAAGAAGAAATTATAATAAGGGAAGATGAACTAACGTTCAATTTTGAGGGGAAGATTGTGAAGTTTGGTATAAGTGACTTTGAGAAGATTACAGGACTAAACTATGGAGAACTTCCTACATTAGATACGCATAAGTTTAGAGAAAAGTTCCTTAAGAAATACTTTAAGGAGGATCAACTAATTATGAGAACTGAACTGAGTAAAATGTTTTTAACTAGAGAGTCAATTAAAAAGGATAAAGTGAAACTTGTCAAACTGTTGTTTCTGACAAACTTCCTACTGACAAAACAAGTAACAACTAGAGTCAAAATTAATCATATTAAGATGTTGGATGACGAGGTGCAATTTGATCAATATCCCTAG

Protein sequence

MGEGSVWSTIREGEEGEERVRKEEEIIIREDELTFNFEGKIVKFGISDFEKITGLNYGELPTLDTHKFREKFLKKYFKEDQLIMRTELSKMFLTRESIKKDKVKLVKLLFLTNFLLTKQVTTRVKINHIKMLDDEVQFDQYP
Homology
BLAST of HG10017624 vs. NCBI nr
Match: KAA0060374.1 (uncharacterized protein E6C27_scaffold22G001730 [Cucumis melo var. makuwa] >TYK22114.1 uncharacterized protein E5676_scaffold318G001110 [Cucumis melo var. makuwa])

HSP 1 Score: 110.2 bits (274), Expect = 1.5e-20
Identity = 68/141 (48.23%), Postives = 85/141 (60.28%), Query Frame = 0

Query: 3   EGSVWSTIREGEEGEERVRKEEEIIIREDELTFNFEGKIVKFGISDFEKITGLNYGELPT 62
           E SV    R   EG  + + +E     +DEL FNFEG I KFGI  FE ITGLN   LP 
Sbjct: 23  EDSVPIAKRRLFEGVLKRKGKETETENDDELWFNFEGTIAKFGIRKFEAITGLNCVPLPI 82

Query: 63  LDTHKFREKFLKKYFKEDQLIMRTELSKMFLTRESIK-KDKVKLVKLLFLTNFLLTKQVT 122
           +D  K + KFL KYFK +  I R+ +S +F   + +K +DK+K+ K+ FL NFLL KQ T
Sbjct: 83  VDNSKVKGKFLSKYFKNEDPISRSRVSFLFNESKKLKEEDKIKMAKIYFLENFLLGKQFT 142

Query: 123 TRVKINHIKMLDDEVQFDQYP 143
           T     HIK+LDDE  FD YP
Sbjct: 143 TGCDFEHIKLLDDEQYFDAYP 163

BLAST of HG10017624 vs. NCBI nr
Match: KGN58352.2 (hypothetical protein Csa_017489 [Cucumis sativus])

HSP 1 Score: 108.6 bits (270), Expect = 4.5e-20
Identity = 58/116 (50.00%), Postives = 81/116 (69.83%), Query Frame = 0

Query: 21  RKEEEIIIREDELTFNFEGKIVKFGISDFEKITGLNYGELPTLDTHKFREKFLKKYFKED 80
           R ++  + +EDEL FNFEG I KFGI ++E ITGLN G LP  +  K + +FL +YFK +
Sbjct: 27  RLDQCTLTKEDELWFNFEGNIAKFGIREYEVITGLNCGPLPQANMEKLKGRFLGRYFKNE 86

Query: 81  QLIMRTELSKMFLTRESIK-KDKVKLVKLLFLTNFLLTKQVTTRVKINHIKMLDDE 136
            +I R+ L+ +F   + +K +D+VKL K+ FL NFLL KQ+TT V I HIK++DDE
Sbjct: 87  DIISRSRLTYIFNDSKKVKDEDRVKLAKIYFLENFLLGKQLTTGVDIEHIKLVDDE 142

BLAST of HG10017624 vs. NCBI nr
Match: XP_022132727.1 (uncharacterized protein LOC111005524 [Momordica charantia] >XP_022132728.1 uncharacterized protein LOC111005524 [Momordica charantia] >XP_022132729.1 uncharacterized protein LOC111005524 [Momordica charantia] >XP_022132730.1 uncharacterized protein LOC111005524 [Momordica charantia])

HSP 1 Score: 94.4 bits (233), Expect = 8.7e-16
Identity = 53/114 (46.49%), Postives = 75/114 (65.79%), Query Frame = 0

Query: 31  DELTFNFEGKIVKFGISDFEKITGLNYGELPTLDTHKF-REKFLKKYFKEDQLIMRTELS 90
           +EL FN EG++ KFGI DF  ITG+N GELPT+D  K  R  F K+YF  ++ I RT+L 
Sbjct: 316 NELWFNLEGRVHKFGIKDFALITGMNCGELPTIDMSKIQRAWFSKRYFGGERTIKRTKLP 375

Query: 91  KMFLTRESIK-KDKVKLVKLLFLTNFLLTKQVTTRVKINHIKMLDDEVQFDQYP 143
           ++F+  +  + KD VK+ KL  L  FLL KQ+TT +   +  ++DD+ QF+ YP
Sbjct: 376 EIFMEMDKGRDKDVVKMAKLYILEMFLLGKQITTGINHEYTLLIDDDEQFEGYP 429

BLAST of HG10017624 vs. NCBI nr
Match: XP_031743197.1 (uncharacterized protein LOC101221625 isoform X9 [Cucumis sativus])

HSP 1 Score: 91.7 bits (226), Expect = 5.6e-15
Identity = 52/114 (45.61%), Postives = 73/114 (64.04%), Query Frame = 0

Query: 31  DELTFNFEGKIVKFGISDFEKITGLNYGELPTLDTHKFRE-KFLKKYFKEDQLIMRTELS 90
           +EL FN EG+I KFG+ DF  ITGLN GELP +D  K ++ KF K+YF  ++ I R +L 
Sbjct: 770 NELWFNLEGRIHKFGMKDFALITGLNCGELPAIDMSKIQKGKFNKRYFGGEKTIRRAKLH 829

Query: 91  KMFLTRESIK-KDKVKLVKLLFLTNFLLTKQVTTRVKINHIKMLDDEVQFDQYP 143
           K+F   +  + KD VK+ KL  L  F+L KQ+ T +   +  ++DD+ QFD YP
Sbjct: 830 KVFTEMDKGRNKDVVKMAKLYILEMFILGKQIRTGINHEYTLLIDDKKQFDSYP 883

BLAST of HG10017624 vs. NCBI nr
Match: XP_031743208.1 (uncharacterized protein LOC101221625 isoform X20 [Cucumis sativus])

HSP 1 Score: 91.7 bits (226), Expect = 5.6e-15
Identity = 52/114 (45.61%), Postives = 73/114 (64.04%), Query Frame = 0

Query: 31  DELTFNFEGKIVKFGISDFEKITGLNYGELPTLDTHKFRE-KFLKKYFKEDQLIMRTELS 90
           +EL FN EG+I KFG+ DF  ITGLN GELP +D  K ++ KF K+YF  ++ I R +L 
Sbjct: 724 NELWFNLEGRIHKFGMKDFALITGLNCGELPAIDMSKIQKGKFNKRYFGGEKTIRRAKLH 783

Query: 91  KMFLTRESIK-KDKVKLVKLLFLTNFLLTKQVTTRVKINHIKMLDDEVQFDQYP 143
           K+F   +  + KD VK+ KL  L  F+L KQ+ T +   +  ++DD+ QFD YP
Sbjct: 784 KVFTEMDKGRNKDVVKMAKLYILEMFILGKQIRTGINHEYTLLIDDKKQFDSYP 837

BLAST of HG10017624 vs. ExPASy TrEMBL
Match: A0A5A7UZA2 (DUF1985 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold318G001110 PE=4 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 7.4e-21
Identity = 68/141 (48.23%), Postives = 85/141 (60.28%), Query Frame = 0

Query: 3   EGSVWSTIREGEEGEERVRKEEEIIIREDELTFNFEGKIVKFGISDFEKITGLNYGELPT 62
           E SV    R   EG  + + +E     +DEL FNFEG I KFGI  FE ITGLN   LP 
Sbjct: 23  EDSVPIAKRRLFEGVLKRKGKETETENDDELWFNFEGTIAKFGIRKFEAITGLNCVPLPI 82

Query: 63  LDTHKFREKFLKKYFKEDQLIMRTELSKMFLTRESIK-KDKVKLVKLLFLTNFLLTKQVT 122
           +D  K + KFL KYFK +  I R+ +S +F   + +K +DK+K+ K+ FL NFLL KQ T
Sbjct: 83  VDNSKVKGKFLSKYFKNEDPISRSRVSFLFNESKKLKEEDKIKMAKIYFLENFLLGKQFT 142

Query: 123 TRVKINHIKMLDDEVQFDQYP 143
           T     HIK+LDDE  FD YP
Sbjct: 143 TGCDFEHIKLLDDEQYFDAYP 163

BLAST of HG10017624 vs. ExPASy TrEMBL
Match: A0A6J1BX50 (uncharacterized protein LOC111005524 OS=Momordica charantia OX=3673 GN=LOC111005524 PE=4 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 4.2e-16
Identity = 53/114 (46.49%), Postives = 75/114 (65.79%), Query Frame = 0

Query: 31  DELTFNFEGKIVKFGISDFEKITGLNYGELPTLDTHKF-REKFLKKYFKEDQLIMRTELS 90
           +EL FN EG++ KFGI DF  ITG+N GELPT+D  K  R  F K+YF  ++ I RT+L 
Sbjct: 316 NELWFNLEGRVHKFGIKDFALITGMNCGELPTIDMSKIQRAWFSKRYFGGERTIKRTKLP 375

Query: 91  KMFLTRESIK-KDKVKLVKLLFLTNFLLTKQVTTRVKINHIKMLDDEVQFDQYP 143
           ++F+  +  + KD VK+ KL  L  FLL KQ+TT +   +  ++DD+ QF+ YP
Sbjct: 376 EIFMEMDKGRDKDVVKMAKLYILEMFLLGKQITTGINHEYTLLIDDDEQFEGYP 429

BLAST of HG10017624 vs. ExPASy TrEMBL
Match: A0A5D3DG30 (DUF1985 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold584G00070 PE=4 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 2.7e-15
Identity = 49/95 (51.58%), Postives = 64/95 (67.37%), Query Frame = 0

Query: 49  FEKITGLNYGELPTLDTHKFREKFLKKYFKEDQLIMRTELSKMFLTRESIKK-DKVKLVK 108
           FE  TGLN G LPT+D  K ++KFL KYFK +  I R  +S +F   + +KK DK+K+ K
Sbjct: 67  FEATTGLNCGPLPTIDILKVKDKFLSKYFKNEDPISRFRVSFLFNELKILKKEDKIKITK 126

Query: 109 LLFLTNFLLTKQVTTRVKINHIKMLDDEVQFDQYP 143
           + FL NFLL KQ TT   + HIK++DDE QFD +P
Sbjct: 127 IYFLENFLLGKQFTTGYDLEHIKLIDDEKQFDAFP 161

BLAST of HG10017624 vs. ExPASy TrEMBL
Match: A0A0A0KI50 (TF-B3 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G489950 PE=4 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 2.7e-15
Identity = 52/114 (45.61%), Postives = 73/114 (64.04%), Query Frame = 0

Query: 31  DELTFNFEGKIVKFGISDFEKITGLNYGELPTLDTHKFRE-KFLKKYFKEDQLIMRTELS 90
           +EL FN EG+I KFG+ DF  ITGLN GELP +D  K ++ KF K+YF  ++ I R +L 
Sbjct: 647 NELWFNLEGRIHKFGMKDFALITGLNCGELPAIDMSKIQKGKFNKRYFGGEKTIRRAKLH 706

Query: 91  KMFLTRESIK-KDKVKLVKLLFLTNFLLTKQVTTRVKINHIKMLDDEVQFDQYP 143
           K+F   +  + KD VK+ KL  L  F+L KQ+ T +   +  ++DD+ QFD YP
Sbjct: 707 KVFTEMDKGRNKDVVKMAKLYILEMFILGKQIRTGINHEYTLLIDDKKQFDSYP 760

BLAST of HG10017624 vs. ExPASy TrEMBL
Match: A0A5D3CNI7 (TF-B3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G005170 PE=4 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 3.6e-15
Identity = 52/113 (46.02%), Postives = 73/113 (64.60%), Query Frame = 0

Query: 32  ELTFNFEGKIVKFGISDFEKITGLNYGELPTLDTHKFRE-KFLKKYFKEDQLIMRTELSK 91
           EL FN EG+I KFG+ DF  ITGLN GELP +D  K ++ KF K+YF  ++ I RT+L +
Sbjct: 703 ELWFNLEGRIHKFGMKDFALITGLNCGELPAIDMSKIQKGKFNKRYFGGEKTIRRTKLHE 762

Query: 92  MFLTRESIK-KDKVKLVKLLFLTNFLLTKQVTTRVKINHIKMLDDEVQFDQYP 143
           +F   +  + KD VK+ KL  L  F+L KQ+ T +   +  ++DD+ QFD YP
Sbjct: 763 VFTEMDKGRNKDVVKMAKLYILEMFILGKQLRTGINHEYTLLIDDKEQFDSYP 815

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0060374.11.5e-2048.23uncharacterized protein E6C27_scaffold22G001730 [Cucumis melo var. makuwa] >TYK2... [more]
KGN58352.24.5e-2050.00hypothetical protein Csa_017489 [Cucumis sativus][more]
XP_022132727.18.7e-1646.49uncharacterized protein LOC111005524 [Momordica charantia] >XP_022132728.1 uncha... [more]
XP_031743197.15.6e-1545.61uncharacterized protein LOC101221625 isoform X9 [Cucumis sativus][more]
XP_031743208.15.6e-1545.61uncharacterized protein LOC101221625 isoform X20 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7UZA27.4e-2148.23DUF1985 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A6J1BX504.2e-1646.49uncharacterized protein LOC111005524 OS=Momordica charantia OX=3673 GN=LOC111005... [more]
A0A5D3DG302.7e-1551.58DUF1985 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A0A0KI502.7e-1545.61TF-B3 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G489950 PE=4 ... [more]
A0A5D3CNI73.6e-1546.02TF-B3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015410Domain of unknown function DUF1985PFAMPF09331DUF1985coord: 29..142
e-value: 6.4E-19
score: 68.3

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10017624.1HG10017624.1mRNA