HG10017598 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10017598
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Basic helix-loop-helix transcription factor
Location	Chr03: 16556617 .. 16557720 (-)
RNA-Seq Expression	HG10017598
Synteny	HG10017598

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTAGCATTATCTTCTTCCTCTTCGTCTTCAAGATTGTTTCTAAGCAATAGAAAAGGGTGGCCATTTGGAGAGCTCTCTGAACAGAACTGCATGGACAAAGTGGCATCTGAAAACATTTGTGAGTCACCATTGTTTGATCTTCATTTTACTTCTCCAAAGGAAGTTGGTTACAAGTCAATACCTTCAACCATTGGTGATGTTGATGATCTATTGGTGTCGAGGAGGCTCAAGCACAATGCGAACGAGCGCGATCGTCGAAAGAAGATCAATCTTCTCTTTTCTTCTCTTCGCTCCATTCTTCCTCCTCATGATCAAGGGGTATTTATTTTTTAAAAAAAAAGAAAAGAAAAAAAACTCTCCCTTGAAACTTATATAATTAGCCTCTGCTAGATGATATAATATTACATTTACTTTTACTTTTGGGTCAATCAGTGATTTAACATAGTATAAGAGCAAGTGGTTCAGGAGATCTCGTGTTCAAACTCCTGCAATATTATATTACCTCTTCAATTAATATTGATTTACACTTATTGGATATTCTACATATTTCAAAATATTAAATATATCTTCACTCATTAATTACTTAAGTTGTTAGGTTAGTCGGTGATTTAACAACCTCTTTTACGTAATTCAAGAAAAAAAATGAAAAAAACGACAAATATTATTTAAACTAAAAATATCTAATTTTTACGATTGAAATTACTACTAAACTCAAAAGTTTTATGATTTGTGCAGAAGAGACTAAGCAATCCAGCAACAGTTTCAGTTGCACTAAAATACATACCAAATCTACAAAAGCAAGTGGAAGAACTTGTTGATAAGAAGAGGCAGCTTATGTTTTCGATGATTACGAGGAGACAAGAAGAAAGCAGCTCAAGCTTGTTGGCTGTCTCAACCAATGGCCTTAGTGAAAGAGAAGTTGTTGTCCAAATAGTTTCCACCTTTCATGGAATCCCTTTGTCTTGGATCTTGCTTGGTTTACATGATGATGGGCTTCACCCTCTCAATATTTCTTCATCTTTGTCCTTTGGAGGAAGACTCTTTTACCATTTACATCTTCAGGTAACTGTATATTATTCTAAATCTTCTTTCACTTGTTGA

mRNA sequence

ATGTTAGCATTATCTTCTTCCTCTTCGTCTTCAAGATTGTTTCTAAGCAATAGAAAAGGGTGGCCATTTGGAGAGCTCTCTGAACAGAACTGCATGGACAAAGTGGCATCTGAAAACATTTGTGAGTCACCATTGTTTGATCTTCATTTTACTTCTCCAAAGGAAGTTGGTTACAAGTCAATACCTTCAACCATTGGTGATGTTGATGATCTATTGGTGTCGAGGAGGCTCAAGCACAATGCGAACGAGCGCGATCGTCGAAAGAAGATCAATCTTCTCTTTTCTTCTCTTCGCTCCATTCTTCCTCCTCATGATCAAGGGAAGAGACTAAGCAATCCAGCAACAGTTTCAGTTGCACTAAAATACATACCAAATCTACAAAAGCAAGTGGAAGAACTTGTTGATAAGAAGAGGCAGCTTATGTTTTCGATGATTACGAGGAGACAAGAAGAAAGCAGCTCAAGCTTGTTGGCTGTCTCAACCAATGGCCTTAGTGAAAGAGAAGTTGTTGTCCAAATAGTTTCCACCTTTCATGGAATCCCTTTGTCTTGGATCTTGCTTGGTTTACATGATGATGGGCTTCACCCTCTCAATATTTCTTCATCTTTGTCCTTTGGAGGAAGACTCTTTTACCATTTACATCTTCAGGTAACTGTATATTATTCTAAATCTTCTTTCACTTGTTGA

Coding sequence (CDS)

ATGTTAGCATTATCTTCTTCCTCTTCGTCTTCAAGATTGTTTCTAAGCAATAGAAAAGGGTGGCCATTTGGAGAGCTCTCTGAACAGAACTGCATGGACAAAGTGGCATCTGAAAACATTTGTGAGTCACCATTGTTTGATCTTCATTTTACTTCTCCAAAGGAAGTTGGTTACAAGTCAATACCTTCAACCATTGGTGATGTTGATGATCTATTGGTGTCGAGGAGGCTCAAGCACAATGCGAACGAGCGCGATCGTCGAAAGAAGATCAATCTTCTCTTTTCTTCTCTTCGCTCCATTCTTCCTCCTCATGATCAAGGGAAGAGACTAAGCAATCCAGCAACAGTTTCAGTTGCACTAAAATACATACCAAATCTACAAAAGCAAGTGGAAGAACTTGTTGATAAGAAGAGGCAGCTTATGTTTTCGATGATTACGAGGAGACAAGAAGAAAGCAGCTCAAGCTTGTTGGCTGTCTCAACCAATGGCCTTAGTGAAAGAGAAGTTGTTGTCCAAATAGTTTCCACCTTTCATGGAATCCCTTTGTCTTGGATCTTGCTTGGTTTACATGATGATGGGCTTCACCCTCTCAATATTTCTTCATCTTTGTCCTTTGGAGGAAGACTCTTTTACCATTTACATCTTCAGGTAACTGTATATTATTCTAAATCTTCTTTCACTTGTTGA

Protein sequence

MLALSSSSSSSRLFLSNRKGWPFGELSEQNCMDKVASENICESPLFDLHFTSPKEVGYKSIPSTIGDVDDLLVSRRLKHNANERDRRKKINLLFSSLRSILPPHDQGKRLSNPATVSVALKYIPNLQKQVEELVDKKRQLMFSMITRRQEESSSSLLAVSTNGLSEREVVVQIVSTFHGIPLSWILLGLHDDGLHPLNISSSLSFGGRLFYHLHLQVTVYYSKSSFTC

Homology

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BLAST of HG10017598 vs. NCBI nr
Match: XP_038882376.1 (transcription factor ORG2-like [Benincasa hispida])

HSP 1 Score: 240.4 bits (612), Expect = 1.6e-59
Identity = 131/163 (80.37%), Postives = 143/163 (87.73%), Query Frame = 0


Query: 55  EVGYKSIPSTIGDVDDLLVSRRLKHNANERDRRKKINLLFSSLRSILPPHDQGKRLSNPA 114
           EV  K   STI  V+DL+ SRRL HNA+ER+RR KINLLFSSLRS+LPPHDQ KRLSNPA
Sbjct: 2   EVDDKLTASTIVGVNDLMASRRLNHNASERNRRTKINLLFSSLRSVLPPHDQRKRLSNPA 61

Query: 115 TVSVALKYIPNLQKQVEELVDKKRQLMFSMITRR-QEESSSSLLAVSTNGLSEREVVVQI 174
           TVSVAL YI NLQKQVEELV+KK+QLM SMITRR QEESSSSLLAVSTN LSE E +VQI
Sbjct: 62  TVSVALNYISNLQKQVEELVEKKKQLMISMITRRSQEESSSSLLAVSTNSLSETE-IVQI 121

Query: 175 VSTFHGIPLSWILLGLHDDGLHPLNISSSLSFGGRLFYHLHLQ 217
           +STFHGIPLS ILLGL +DGLHPLNISSSLSFGGR+FY+LHLQ
Sbjct: 122 ISTFHGIPLSCILLGLQEDGLHPLNISSSLSFGGRIFYYLHLQ 163

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BLAST of HG10017598 vs. NCBI nr
Match: CAN64266.1 (hypothetical protein VITISV_031510 [Vitis vinifera])

HSP 1 Score: 156.0 bits (393), Expect = 3.9e-34
Identity = 108/214 (50.47%), Postives = 137/214 (64.02%), Query Frame = 0


Query: 20  GWPFGE--LSEQNCM--DKVASENICESPLFDLHFTSPKEVGYKSIPSTIGDVDDLLVSR 79
           GWP+ +    EQN +  +  ASE+    P  +       E+ Y S PS     +  +V +
Sbjct: 13  GWPWEDPXSHEQNYIYQETEASESFLHLPSSE----PQAELNY-STPSAAVSGNPTMV-K 72

Query: 80  RLKHNANERDRRKKINLLFSSLRSILPPHDQGKRLSNPATVSVALKYIPNLQKQVEELVD 139
           +L HNA+ERDRRKKIN L+SSLRS+LP  DQ K+LS P+TVS  LKYIP LQKQVE L+ 
Sbjct: 73  KLNHNASERDRRKKINSLYSSLRSLLPAADQAKKLSIPSTVSRVLKYIPELQKQVERLIQ 132

Query: 140 KKRQLMFSMITR----------RQEESSSSLLAVSTNGLSEREVVVQIVSTF--HGIPLS 199
           KK +L+ S I+R          R+   +SSL AVS N LS+RE+VVQI STF  H  PLS
Sbjct: 133 KKEELL-SKISRQGDIIHQEKQRKATLASSLSAVSANRLSDREIVVQI-STFKVHESPLS 192

Query: 200 WILLGLHDDGLHPLNISSSLSFGGRLFYHLHLQV 218
            +LL L +DGL  +N SS  SFGGR+FY+LHLQV
Sbjct: 193 EVLLNLEEDGLLVINASSFESFGGRVFYNLHLQV 218

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BLAST of HG10017598 vs. NCBI nr
Match: XP_010653965.1 (PREDICTED: transcription factor ORG2 [Vitis vinifera] >XP_019077027.1 PREDICTED: transcription factor ORG2 [Vitis vinifera] >RVW92213.1 Transcription factor ORG2 [Vitis vinifera] >CBI30114.3 unnamed protein product, partial [Vitis vinifera])

HSP 1 Score: 156.0 bits (393), Expect = 3.9e-34
Identity = 108/214 (50.47%), Postives = 137/214 (64.02%), Query Frame = 0


Query: 20  GWPFGE--LSEQNCM--DKVASENICESPLFDLHFTSPKEVGYKSIPSTIGDVDDLLVSR 79
           GWP+ +    EQN +  +  ASE+    P  +       E+ Y S PS     +  +V +
Sbjct: 13  GWPWEDPISHEQNYIYQETEASESFLHLPSSE----PQAELNY-STPSAAVSGNPTMV-K 72

Query: 80  RLKHNANERDRRKKINLLFSSLRSILPPHDQGKRLSNPATVSVALKYIPNLQKQVEELVD 139
           +L HNA+ERDRRKKIN L+SSLRS+LP  DQ K+LS P+TVS  LKYIP LQKQVE L+ 
Sbjct: 73  KLNHNASERDRRKKINSLYSSLRSLLPAADQAKKLSIPSTVSRVLKYIPELQKQVERLIQ 132

Query: 140 KKRQLMFSMITR----------RQEESSSSLLAVSTNGLSEREVVVQIVSTF--HGIPLS 199
           KK +L+ S I+R          R+   +SSL AVS N LS+RE+VVQI STF  H  PLS
Sbjct: 133 KKEELL-SKISRQGDIIHQEKQRKATLASSLSAVSANRLSDREIVVQI-STFKVHESPLS 192

Query: 200 WILLGLHDDGLHPLNISSSLSFGGRLFYHLHLQV 218
            +LL L +DGL  +N SS  SFGGR+FY+LHLQV
Sbjct: 193 EVLLNLEEDGLLVINASSFESFGGRVFYNLHLQV 218

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BLAST of HG10017598 vs. NCBI nr
Match: XP_034693284.1 (transcription factor ORG2-like [Vitis riparia])

HSP 1 Score: 151.4 bits (381), Expect = 9.6e-33
Identity = 106/214 (49.53%), Postives = 136/214 (63.55%), Query Frame = 0


Query: 20  GWPFGE--LSEQNCM--DKVASENICESPLFDLHFTSPKEVGYKSIPSTIGDVDDLLVSR 79
           GWP+ +    EQN +  +  ASE+    P  +       E+ Y S P      +  +V +
Sbjct: 13  GWPWEDPISHEQNYIYQETEASESFLHLPSSE----PQAELNY-STPCAAVSGNPTMV-K 72

Query: 80  RLKHNANERDRRKKINLLFSSLRSILPPHDQGKRLSNPATVSVALKYIPNLQKQVEELVD 139
           +L HNA+ERDRRKKIN L+SSLRS+LP  DQ K+LS P+TVS  LKYIP LQ+QVE L+ 
Sbjct: 73  KLNHNASERDRRKKINSLYSSLRSLLPAADQAKKLSIPSTVSRVLKYIPELQQQVERLIQ 132

Query: 140 KKRQLMFSMITR----------RQEESSSSLLAVSTNGLSEREVVVQIVSTF--HGIPLS 199
           KK +L+ S I+R          R+   +SSL AVS N LS+RE+VVQI STF  H  PLS
Sbjct: 133 KKEELL-SKISRQGDIIHLEKQRKGTLASSLSAVSANRLSDREIVVQI-STFKVHESPLS 192

Query: 200 WILLGLHDDGLHPLNISSSLSFGGRLFYHLHLQV 218
            +LL L +DGL  +N SS  SFGGR+FY+LHLQV
Sbjct: 193 EVLLNLGEDGLLVINASSFESFGGRVFYNLHLQV 218

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BLAST of HG10017598 vs. NCBI nr
Match: XP_004513200.2 (transcription factor ORG2-like [Cicer arietinum])

HSP 1 Score: 150.2 bits (378), Expect = 2.1e-32
Identity = 96/209 (45.93%), Postives = 126/209 (60.29%), Query Frame = 0


Query: 20  GWPFGELSEQNCMDKVASENICESPLFDLHFTSPKEVGYKSIPSTIGDVDDLLVSRRLKH 79
           GWPF E    N  D           LF+ H    +E    S PS      DL + ++L H
Sbjct: 33  GWPFEEPISHNQQDYFYK---ATDQLFNFHHLVEEE---NSTPSQ-ATSSDLSMVKKLIH 92

Query: 80  NANERDRRKKINLLFSSLRSILPPHDQGKRLSNPATVSVALKYIPNLQKQVEELVDKKRQ 139
           NA+ERDRRKKIN L+SSLRS+LP  +Q K+LSNPAT+S  LKYIP LQKQVE L+ +K  
Sbjct: 93  NASERDRRKKINTLYSSLRSLLPVAEQMKKLSNPATISRVLKYIPELQKQVEGLLTRKEA 152

Query: 140 LMF----------SMITRRQEESSSSLLAVSTNGLSEREVVVQIVS-TFHGIPLSWILLG 199
           ++           S  + R++ S +S   VST+ L++ E  +QI S + H IPLS IL+ 
Sbjct: 153 ILLKLSPQVDEVKSKESERKKHSKNSGFVVSTSRLNDSEAAIQISSYSIHKIPLSEILMC 212

Query: 200 LHDDGLHPLNISSSLSFGGRLFYHLHLQV 218
           L +DGL  LNISSS +FGG++FY+ H QV
Sbjct: 213 LENDGLLLLNISSSQTFGGKVFYNFHFQV 234

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BLAST of HG10017598 vs. ExPASy Swiss-Prot
Match: Q9M1K1 (Transcription factor ORG2 OS=Arabidopsis thaliana OX=3702 GN=ORG2 PE=1 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 2.3e-29
Identity = 79/169 (46.75%), Postives = 113/169 (66.86%), Query Frame = 0


Query: 60  SIPSTIGDVD-DLLVSRRLKHNANERDRRKKINLLFSSLRSILPPHDQGKRLSNPATVSV 119
           S+ S   ++D + +V ++L HNA+ERDRRKKIN LFSSLRS LP  DQ K+LS P TVS 
Sbjct: 56  SVSSEGNEIDNNPVVVKKLNHNASERDRRKKINTLFSSLRSCLPASDQSKKLSIPETVSK 115

Query: 120 ALKYIPNLQKQVEELVDKKRQLM--------FSMITRRQEESSSSLLA-VSTNGLSEREV 179
           +LKYIP LQ+QV+ L+ KK +++        F +  ++Q ++ +S L+ VS   L + EV
Sbjct: 116 SLKYIPELQQQVKRLIQKKEEILVRVSGQRDFELYDKQQPKAVASYLSTVSATRLGDNEV 175

Query: 180 VVQIVST-FHGIPLSWILLGLHDDGLHPLNISSSLSFGGRLFYHLHLQV 218
           +VQ+ S+  H   +S +L G+ +DG   +++SSS S G RLFY LHLQV
Sbjct: 176 MVQVSSSKIHNFSISNVLGGIEEDGFVLVDVSSSRSQGERLFYTLHLQV 224

[Close]

BLAST of HG10017598 vs. ExPASy Swiss-Prot
Match: Q9ZVB5 (Transcription factor bHLH100 OS=Arabidopsis thaliana OX=3702 GN=BHLH100 PE=1 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 6.7e-29
Identity = 90/210 (42.86%), Postives = 120/210 (57.14%), Query Frame = 0


Query: 20  GWPFGELSEQNCMDKVASENICESPLFDLHFTSPKEVGYKSIPSTIGDVDDLLVSRRLKH 79
           GWP G+ S     D   S    + PL DL  T        S  +    +D+ +V ++L H
Sbjct: 13  GWPCGDHSFYETDD--VSNTFLDFPLPDLTVTHEN----VSSENNRTLLDNPVVMKKLNH 72

Query: 80  NANERDRRKKINLLFSSLRSILPPHDQGKRLSNPATVSVALKYIPNLQKQVEELVDKKRQ 139
           NA+ER+RRKKIN +FSSLRS LPP +Q K+LS  ATVS ALKYIP LQ+QV++L+ KK +
Sbjct: 73  NASERERRKKINTMFSSLRSCLPPTNQTKKLSVSATVSQALKYIPELQEQVKKLMKKKEE 132

Query: 140 LMFSMITRR-----------QEESSSSLLAVSTNGLSEREVVVQIVS-TFHGIPLSWILL 199
           L F +  +R           +E  +S    VS+  LSE EV+VQI S          +L 
Sbjct: 133 LSFQISGQRDLVYTDQNSKSEEGVTSYASTVSSTRLSETEVMVQISSLQTEKCSFGNVLS 192

Query: 200 GLHDDGLHPLNISSSLSFGGRLFYHLHLQV 218
           G+ +DGL  +  SSS S G RLFY +HLQ+
Sbjct: 193 GVEEDGLVLVGASSSRSHGERLFYSMHLQI 216

[Close]

BLAST of HG10017598 vs. ExPASy Swiss-Prot
Match: Q9M1K0 (Transcription factor ORG3 OS=Arabidopsis thaliana OX=3702 GN=ORG3 PE=1 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 1.7e-27
Identity = 78/169 (46.15%), Postives = 109/169 (64.50%), Query Frame = 0


Query: 60  SIPSTIGDVD-DLLVSRRLKHNANERDRRKKINLLFSSLRSILPPHDQGKRLSNPATVSV 119
           S+ S   ++D + +V ++L HNA+ERDRR+KIN LFSSLRS LP   Q K+LS PATVS 
Sbjct: 61  SVSSEGNEIDNNPVVVKKLNHNASERDRRRKINSLFSSLRSCLPASGQSKKLSIPATVSR 120

Query: 120 ALKYIPNLQKQVEELVDKKRQLMFSMITRRQEES---------SSSLLAVSTNGLSEREV 179
           +LKYIP LQ+QV++L+ KK +L+  +  +R  E          ++ +  VS   L + EV
Sbjct: 121 SLKYIPELQEQVKKLIKKKEELLVQISGQRNTECYVKQPPKAVANYISTVSATRLGDNEV 180

Query: 180 VVQIVST-FHGIPLSWILLGLHDDGLHPLNISSSLSFGGRLFYHLHLQV 218
           +VQI S+  H   +S +L GL +D    +++SSS S G RLFY LHLQV
Sbjct: 181 MVQISSSKIHNFSISNVLSGLEEDRFVLVDMSSSRSQGERLFYTLHLQV 229

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BLAST of HG10017598 vs. ExPASy Swiss-Prot
Match: A2WZ60 (Protein IRON-RELATED TRANSCRIPTION FACTOR 2 OS=Oryza sativa subsp. indica OX=39946 GN=IRO2 PE=3 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 5.5e-23
Identity = 69/153 (45.10%), Postives = 94/153 (61.44%), Query Frame = 0


Query: 75  RRLKHNANERDRRKKINLLFSSLRSILPPHDQGKRLSNPATVSVALKYIPNLQKQVEELV 134
           R+L HNA ERDRRK++N L+SSLR++LP  D  K+LS P TVS  LKYIP LQKQVE L 
Sbjct: 69  RKLSHNAYERDRRKQLNELYSSLRALLPDADHTKKLSIPTTVSRVLKYIPELQKQVENLE 128

Query: 135 DKKRQLMFSMITR-------RQEESSSSLLAVSTNGLSEREVVVQI--VSTFHG--IPLS 194
            KK++L  +  T         Q  S      VS   +++ E++VQ+  +S   G  +PLS
Sbjct: 129 RKKKELTTTSTTNCKPGVLGSQLMSEGMAPIVSATCINDMEIMVQVSLLSNVAGSVLPLS 188

Query: 195 WILLGLHDDGLHPLNISSSLSFGGRLFYHLHLQ 217
             +  L ++GLH ++ S+S  FG R FY +HLQ
Sbjct: 189 KCIKVLENEGLHFISSSTSSGFGNRTFYSIHLQ 221

[Close]

BLAST of HG10017598 vs. ExPASy Swiss-Prot
Match: Q9FYE6 (Transcription factor bHLH101 OS=Arabidopsis thaliana OX=3702 GN=BHLH101 PE=1 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 1.0e-21
Identity = 60/158 (37.97%), Postives = 103/158 (65.19%), Query Frame = 0


Query: 71  LLVSRRLKHNANERDRRKKINLLFSSLRSILPPHDQGKRLSNPATVSVALKYIPNLQKQV 130
           +++ ++L HNA+ERDRR+K+N L+SSLR++LP  DQ ++LS P TV+  +KYIP  ++++
Sbjct: 62  VVLEKKLNHNASERDRRRKLNALYSSLRALLPLSDQKRKLSIPMTVARVVKYIPEQKQEL 121

Query: 131 EELVDKKRQLMFSMITRRQEE-----------SSSSLLAVSTNGLSEREVVVQIVSTFHG 190
           + L  +K +L+  +  +  +E            SSS   ++ N L++ E+ VQI +T   
Sbjct: 122 QRLSRRKEELLKRISRKTHQEQLRNKAMMDSIDSSSSQRIAANWLTDTEIAVQI-ATSKW 181

Query: 191 IPLSWILLGLHDDGLHPLNISSSLSFGGRLFYHLHLQV 218
             +S +LL L ++GL+ +++SSS+S   R+FY LHLQ+
Sbjct: 182 TSVSDMLLRLEENGLNVISVSSSVSSTARIFYTLHLQM 218

[Close]

BLAST of HG10017598 vs. ExPASy TrEMBL
Match: D7TIN8 (BHLH domain-containing protein OS=Vitis vinifera OX=29760 GN=VIT_08s0007g05300 PE=4 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 1.9e-34
Identity = 108/214 (50.47%), Postives = 137/214 (64.02%), Query Frame = 0


Query: 20  GWPFGE--LSEQNCM--DKVASENICESPLFDLHFTSPKEVGYKSIPSTIGDVDDLLVSR 79
           GWP+ +    EQN +  +  ASE+    P  +       E+ Y S PS     +  +V +
Sbjct: 13  GWPWEDPISHEQNYIYQETEASESFLHLPSSE----PQAELNY-STPSAAVSGNPTMV-K 72

Query: 80  RLKHNANERDRRKKINLLFSSLRSILPPHDQGKRLSNPATVSVALKYIPNLQKQVEELVD 139
           +L HNA+ERDRRKKIN L+SSLRS+LP  DQ K+LS P+TVS  LKYIP LQKQVE L+ 
Sbjct: 73  KLNHNASERDRRKKINSLYSSLRSLLPAADQAKKLSIPSTVSRVLKYIPELQKQVERLIQ 132

Query: 140 KKRQLMFSMITR----------RQEESSSSLLAVSTNGLSEREVVVQIVSTF--HGIPLS 199
           KK +L+ S I+R          R+   +SSL AVS N LS+RE+VVQI STF  H  PLS
Sbjct: 133 KKEELL-SKISRQGDIIHQEKQRKATLASSLSAVSANRLSDREIVVQI-STFKVHESPLS 192

Query: 200 WILLGLHDDGLHPLNISSSLSFGGRLFYHLHLQV 218
            +LL L +DGL  +N SS  SFGGR+FY+LHLQV
Sbjct: 193 EVLLNLEEDGLLVINASSFESFGGRVFYNLHLQV 218

[Close]

BLAST of HG10017598 vs. ExPASy TrEMBL
Match: A0A438I684 (Transcription factor ORG2 OS=Vitis vinifera OX=29760 GN=ORG2_2 PE=4 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 1.9e-34
Identity = 108/214 (50.47%), Postives = 137/214 (64.02%), Query Frame = 0


Query: 20  GWPFGE--LSEQNCM--DKVASENICESPLFDLHFTSPKEVGYKSIPSTIGDVDDLLVSR 79
           GWP+ +    EQN +  +  ASE+    P  +       E+ Y S PS     +  +V +
Sbjct: 13  GWPWEDPISHEQNYIYQETEASESFLHLPSSE----PQAELNY-STPSAAVSGNPTMV-K 72

Query: 80  RLKHNANERDRRKKINLLFSSLRSILPPHDQGKRLSNPATVSVALKYIPNLQKQVEELVD 139
           +L HNA+ERDRRKKIN L+SSLRS+LP  DQ K+LS P+TVS  LKYIP LQKQVE L+ 
Sbjct: 73  KLNHNASERDRRKKINSLYSSLRSLLPAADQAKKLSIPSTVSRVLKYIPELQKQVERLIQ 132

Query: 140 KKRQLMFSMITR----------RQEESSSSLLAVSTNGLSEREVVVQIVSTF--HGIPLS 199
           KK +L+ S I+R          R+   +SSL AVS N LS+RE+VVQI STF  H  PLS
Sbjct: 133 KKEELL-SKISRQGDIIHQEKQRKATLASSLSAVSANRLSDREIVVQI-STFKVHESPLS 192

Query: 200 WILLGLHDDGLHPLNISSSLSFGGRLFYHLHLQV 218
            +LL L +DGL  +N SS  SFGGR+FY+LHLQV
Sbjct: 193 EVLLNLEEDGLLVINASSFESFGGRVFYNLHLQV 218

[Close]

BLAST of HG10017598 vs. ExPASy TrEMBL
Match: A5C6G0 (BHLH domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_031510 PE=4 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 1.9e-34
Identity = 108/214 (50.47%), Postives = 137/214 (64.02%), Query Frame = 0


Query: 20  GWPFGE--LSEQNCM--DKVASENICESPLFDLHFTSPKEVGYKSIPSTIGDVDDLLVSR 79
           GWP+ +    EQN +  +  ASE+    P  +       E+ Y S PS     +  +V +
Sbjct: 13  GWPWEDPXSHEQNYIYQETEASESFLHLPSSE----PQAELNY-STPSAAVSGNPTMV-K 72

Query: 80  RLKHNANERDRRKKINLLFSSLRSILPPHDQGKRLSNPATVSVALKYIPNLQKQVEELVD 139
           +L HNA+ERDRRKKIN L+SSLRS+LP  DQ K+LS P+TVS  LKYIP LQKQVE L+ 
Sbjct: 73  KLNHNASERDRRKKINSLYSSLRSLLPAADQAKKLSIPSTVSRVLKYIPELQKQVERLIQ 132

Query: 140 KKRQLMFSMITR----------RQEESSSSLLAVSTNGLSEREVVVQIVSTF--HGIPLS 199
           KK +L+ S I+R          R+   +SSL AVS N LS+RE+VVQI STF  H  PLS
Sbjct: 133 KKEELL-SKISRQGDIIHQEKQRKATLASSLSAVSANRLSDREIVVQI-STFKVHESPLS 192

Query: 200 WILLGLHDDGLHPLNISSSLSFGGRLFYHLHLQV 218
            +LL L +DGL  +N SS  SFGGR+FY+LHLQV
Sbjct: 193 EVLLNLEEDGLLVINASSFESFGGRVFYNLHLQV 218

[Close]

BLAST of HG10017598 vs. ExPASy TrEMBL
Match: A0A1S2Z1A2 (transcription factor ORG2-like OS=Cicer arietinum OX=3827 GN=LOC101491521 PE=4 SV=2)

HSP 1 Score: 150.2 bits (378), Expect = 1.0e-32
Identity = 96/209 (45.93%), Postives = 126/209 (60.29%), Query Frame = 0


Query: 20  GWPFGELSEQNCMDKVASENICESPLFDLHFTSPKEVGYKSIPSTIGDVDDLLVSRRLKH 79
           GWPF E    N  D           LF+ H    +E    S PS      DL + ++L H
Sbjct: 33  GWPFEEPISHNQQDYFYK---ATDQLFNFHHLVEEE---NSTPSQ-ATSSDLSMVKKLIH 92

Query: 80  NANERDRRKKINLLFSSLRSILPPHDQGKRLSNPATVSVALKYIPNLQKQVEELVDKKRQ 139
           NA+ERDRRKKIN L+SSLRS+LP  +Q K+LSNPAT+S  LKYIP LQKQVE L+ +K  
Sbjct: 93  NASERDRRKKINTLYSSLRSLLPVAEQMKKLSNPATISRVLKYIPELQKQVEGLLTRKEA 152

Query: 140 LMF----------SMITRRQEESSSSLLAVSTNGLSEREVVVQIVS-TFHGIPLSWILLG 199
           ++           S  + R++ S +S   VST+ L++ E  +QI S + H IPLS IL+ 
Sbjct: 153 ILLKLSPQVDEVKSKESERKKHSKNSGFVVSTSRLNDSEAAIQISSYSIHKIPLSEILMC 212

Query: 200 LHDDGLHPLNISSSLSFGGRLFYHLHLQV 218
           L +DGL  LNISSS +FGG++FY+ H QV
Sbjct: 213 LENDGLLLLNISSSQTFGGKVFYNFHFQV 234

[Close]

BLAST of HG10017598 vs. ExPASy TrEMBL
Match: A0A438DGB9 (Transcription factor ORG2 OS=Vitis vinifera OX=29760 GN=ORG2_3 PE=4 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 3.0e-32
Identity = 96/208 (46.15%), Postives = 125/208 (60.10%), Query Frame = 0


Query: 20  GWPFGELSEQNCMDKVASENICESPLFDLHFTSPKEVGYKSIPSTIGDVDDLLVSRRLKH 79
           GWP  E    +  + +  E         L  + P+     S PST    +  +V ++L H
Sbjct: 13  GWPL-EDPISHAQNYIYGETETSESFLHLSSSQPQVELNCSTPSTAVSGNPTMV-KKLNH 72

Query: 80  NANERDRRKKINLLFSSLRSILPPHDQGKRLSNPATVSVALKYIPNLQKQVEELVDKKRQ 139
           NA+ERDRRKKIN L+SS+RS+LP  DQ K+LS P+TVS  LKYIP LQ+QVE L+ KK +
Sbjct: 73  NASERDRRKKINSLYSSMRSLLPSADQAKKLSIPSTVSRVLKYIPELQRQVERLIQKKEE 132

Query: 140 LM---------FSMITRRQEESSSSLLAVSTNGLSEREVVVQIVSTF--HGIPLSWILLG 199
            +           + ++R     SSL AVS   LS+RE+VVQI STF  H  PLS +LL 
Sbjct: 133 FLSKISREGDPIHLESQRNGTLGSSLSAVSARRLSDREIVVQI-STFNVHESPLSEVLLN 192

Query: 200 LHDDGLHPLNISSSLSFGGRLFYHLHLQ 217
           L +DGL  +N SS  SFGGR+FY+LHLQ
Sbjct: 193 LEEDGLLVINASSFESFGGRVFYNLHLQ 217

[Close]

BLAST of HG10017598 vs. TAIR 10
Match: AT3G56970.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 130.6 bits (327), Expect = 1.6e-30
Identity = 79/169 (46.75%), Postives = 113/169 (66.86%), Query Frame = 0


Query: 60  SIPSTIGDVD-DLLVSRRLKHNANERDRRKKINLLFSSLRSILPPHDQGKRLSNPATVSV 119
           S+ S   ++D + +V ++L HNA+ERDRRKKIN LFSSLRS LP  DQ K+LS P TVS 
Sbjct: 56  SVSSEGNEIDNNPVVVKKLNHNASERDRRKKINTLFSSLRSCLPASDQSKKLSIPETVSK 115

Query: 120 ALKYIPNLQKQVEELVDKKRQLM--------FSMITRRQEESSSSLLA-VSTNGLSEREV 179
           +LKYIP LQ+QV+ L+ KK +++        F +  ++Q ++ +S L+ VS   L + EV
Sbjct: 116 SLKYIPELQQQVKRLIQKKEEILVRVSGQRDFELYDKQQPKAVASYLSTVSATRLGDNEV 175

Query: 180 VVQIVST-FHGIPLSWILLGLHDDGLHPLNISSSLSFGGRLFYHLHLQV 218
           +VQ+ S+  H   +S +L G+ +DG   +++SSS S G RLFY LHLQV
Sbjct: 176 MVQVSSSKIHNFSISNVLGGIEEDGFVLVDVSSSRSQGERLFYTLHLQV 224

[Close]

BLAST of HG10017598 vs. TAIR 10
Match: AT2G41240.1 (basic helix-loop-helix protein 100 )

HSP 1 Score: 129.0 bits (323), Expect = 4.8e-30
Identity = 90/210 (42.86%), Postives = 120/210 (57.14%), Query Frame = 0


Query: 20  GWPFGELSEQNCMDKVASENICESPLFDLHFTSPKEVGYKSIPSTIGDVDDLLVSRRLKH 79
           GWP G+ S     D   S    + PL DL  T        S  +    +D+ +V ++L H
Sbjct: 13  GWPCGDHSFYETDD--VSNTFLDFPLPDLTVTHEN----VSSENNRTLLDNPVVMKKLNH 72

Query: 80  NANERDRRKKINLLFSSLRSILPPHDQGKRLSNPATVSVALKYIPNLQKQVEELVDKKRQ 139
           NA+ER+RRKKIN +FSSLRS LPP +Q K+LS  ATVS ALKYIP LQ+QV++L+ KK +
Sbjct: 73  NASERERRKKINTMFSSLRSCLPPTNQTKKLSVSATVSQALKYIPELQEQVKKLMKKKEE 132

Query: 140 LMFSMITRR-----------QEESSSSLLAVSTNGLSEREVVVQIVS-TFHGIPLSWILL 199
           L F +  +R           +E  +S    VS+  LSE EV+VQI S          +L 
Sbjct: 133 LSFQISGQRDLVYTDQNSKSEEGVTSYASTVSSTRLSETEVMVQISSLQTEKCSFGNVLS 192

Query: 200 GLHDDGLHPLNISSSLSFGGRLFYHLHLQV 218
           G+ +DGL  +  SSS S G RLFY +HLQ+
Sbjct: 193 GVEEDGLVLVGASSSRSHGERLFYSMHLQI 216

[Close]

BLAST of HG10017598 vs. TAIR 10
Match: AT3G56980.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 124.4 bits (311), Expect = 1.2e-28
Identity = 78/169 (46.15%), Postives = 109/169 (64.50%), Query Frame = 0


Query: 60  SIPSTIGDVD-DLLVSRRLKHNANERDRRKKINLLFSSLRSILPPHDQGKRLSNPATVSV 119
           S+ S   ++D + +V ++L HNA+ERDRR+KIN LFSSLRS LP   Q K+LS PATVS 
Sbjct: 61  SVSSEGNEIDNNPVVVKKLNHNASERDRRRKINSLFSSLRSCLPASGQSKKLSIPATVSR 120

Query: 120 ALKYIPNLQKQVEELVDKKRQLMFSMITRRQEES---------SSSLLAVSTNGLSEREV 179
           +LKYIP LQ+QV++L+ KK +L+  +  +R  E          ++ +  VS   L + EV
Sbjct: 121 SLKYIPELQEQVKKLIKKKEELLVQISGQRNTECYVKQPPKAVANYISTVSATRLGDNEV 180

Query: 180 VVQIVST-FHGIPLSWILLGLHDDGLHPLNISSSLSFGGRLFYHLHLQV 218
           +VQI S+  H   +S +L GL +D    +++SSS S G RLFY LHLQV
Sbjct: 181 MVQISSSKIHNFSISNVLSGLEEDRFVLVDMSSSRSQGERLFYTLHLQV 229

[Close]

BLAST of HG10017598 vs. TAIR 10
Match: AT2G41240.2 (basic helix-loop-helix protein 100 )

HSP 1 Score: 123.6 bits (309), Expect = 2.0e-28
Identity = 90/210 (42.86%), Postives = 119/210 (56.67%), Query Frame = 0


Query: 20  GWPFGELSEQNCMDKVASENICESPLFDLHFTSPKEVGYKSIPSTIGDVDDLLVSRRLKH 79
           GWP G+ S     D   S    + PL DL  T        S  +    +D+ +V ++L H
Sbjct: 13  GWPCGDHSFYETDD--VSNTFLDFPLPDLTVTHEN----VSSENNRTLLDNPVVMKKLNH 72

Query: 80  NANERDRRKKINLLFSSLRSILPPHDQGKRLSNPATVSVALKYIPNLQKQVEELVDKKRQ 139
           NA+ER+RRKKIN +FSSLRS LPP +Q K LS  ATVS ALKYIP LQ+QV++L+ KK +
Sbjct: 73  NASERERRKKINTMFSSLRSCLPPTNQTK-LSVSATVSQALKYIPELQEQVKKLMKKKEE 132

Query: 140 LMFSMITRR-----------QEESSSSLLAVSTNGLSEREVVVQIVS-TFHGIPLSWILL 199
           L F +  +R           +E  +S    VS+  LSE EV+VQI S          +L 
Sbjct: 133 LSFQISGQRDLVYTDQNSKSEEGVTSYASTVSSTRLSETEVMVQISSLQTEKCSFGNVLS 192

Query: 200 GLHDDGLHPLNISSSLSFGGRLFYHLHLQV 218
           G+ +DGL  +  SSS S G RLFY +HLQ+
Sbjct: 193 GVEEDGLVLVGASSSRSHGERLFYSMHLQI 215

[Close]

BLAST of HG10017598 vs. TAIR 10
Match: AT5G04150.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 105.1 bits (261), Expect = 7.4e-23
Identity = 60/158 (37.97%), Postives = 103/158 (65.19%), Query Frame = 0


Query: 71  LLVSRRLKHNANERDRRKKINLLFSSLRSILPPHDQGKRLSNPATVSVALKYIPNLQKQV 130
           +++ ++L HNA+ERDRR+K+N L+SSLR++LP  DQ ++LS P TV+  +KYIP  ++++
Sbjct: 62  VVLEKKLNHNASERDRRRKLNALYSSLRALLPLSDQKRKLSIPMTVARVVKYIPEQKQEL 121

Query: 131 EELVDKKRQLMFSMITRRQEE-----------SSSSLLAVSTNGLSEREVVVQIVSTFHG 190
           + L  +K +L+  +  +  +E            SSS   ++ N L++ E+ VQI +T   
Sbjct: 122 QRLSRRKEELLKRISRKTHQEQLRNKAMMDSIDSSSSQRIAANWLTDTEIAVQI-ATSKW 181

Query: 191 IPLSWILLGLHDDGLHPLNISSSLSFGGRLFYHLHLQV 218
             +S +LL L ++GL+ +++SSS+S   R+FY LHLQ+
Sbjct: 182 TSVSDMLLRLEENGLNVISVSSSVSSTARIFYTLHLQM 218

The following BLAST results are available for this feature:

BLAST of HG10017598 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038882376.1	1.6e-59	80.37	transcription factor ORG2-like [Benincasa hispida]	[more]
CAN64266.1	3.9e-34	50.47	hypothetical protein VITISV_031510 [Vitis vinifera]	[more]
XP_010653965.1	3.9e-34	50.47	PREDICTED: transcription factor ORG2 [Vitis vinifera] >XP_019077027.1 PREDICTED:...	[more]
XP_034693284.1	9.6e-33	49.53	transcription factor ORG2-like [Vitis riparia]	[more]
XP_004513200.2	2.1e-32	45.93	transcription factor ORG2-like [Cicer arietinum]	[more]

BLAST of HG10017598 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M1K1	2.3e-29	46.75	Transcription factor ORG2 OS=Arabidopsis thaliana OX=3702 GN=ORG2 PE=1 SV=1	[more]
Q9ZVB5	6.7e-29	42.86	Transcription factor bHLH100 OS=Arabidopsis thaliana OX=3702 GN=BHLH100 PE=1 SV=...	[more]
Q9M1K0	1.7e-27	46.15	Transcription factor ORG3 OS=Arabidopsis thaliana OX=3702 GN=ORG3 PE=1 SV=1	[more]
A2WZ60	5.5e-23	45.10	Protein IRON-RELATED TRANSCRIPTION FACTOR 2 OS=Oryza sativa subsp. indica OX=399...	[more]
Q9FYE6	1.0e-21	37.97	Transcription factor bHLH101 OS=Arabidopsis thaliana OX=3702 GN=BHLH101 PE=1 SV=...	[more]

BLAST of HG10017598 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
D7TIN8	1.9e-34	50.47	BHLH domain-containing protein OS=Vitis vinifera OX=29760 GN=VIT_08s0007g05300 P...	[more]
A0A438I684	1.9e-34	50.47	Transcription factor ORG2 OS=Vitis vinifera OX=29760 GN=ORG2_2 PE=4 SV=1	[more]
A5C6G0	1.9e-34	50.47	BHLH domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_031510 PE=4 ...	[more]
A0A1S2Z1A2	1.0e-32	45.93	transcription factor ORG2-like OS=Cicer arietinum OX=3827 GN=LOC101491521 PE=4 S...	[more]
A0A438DGB9	3.0e-32	46.15	Transcription factor ORG2 OS=Vitis vinifera OX=29760 GN=ORG2_3 PE=4 SV=1	[more]

BLAST of HG10017598 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G56970.1	1.6e-30	46.75	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT2G41240.1	4.8e-30	42.86	basic helix-loop-helix protein 100	[more]
AT3G56980.1	1.2e-28	46.15	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT2G41240.2	2.0e-28	42.86	basic helix-loop-helix protein 100	[more]
AT5G04150.1	7.4e-23	37.97	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 80..132 e-value: 6.1E-12 score: 55.7
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 75..127 e-value: 1.9E-13 score: 50.2
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 74..126 score: 14.894055
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 72..157 e-value: 9.3E-16 score: 59.5
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 74..148
IPR015660	Achaete-scute transcription factor-related	PANTHER	PTHR13935	ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED	coord: 13..216
None	No IPR available	PANTHER	PTHR13935:SF41	TRANSCRIPTION FACTOR ORG2-RELATED	coord: 13..216
None	No IPR available	CDD	cd18914	bHLH_AtORG2_like	coord: 75..143 e-value: 7.39866E-24 score: 88.8995

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10017598.1	HG10017598.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0046983	protein dimerization activity